Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:16:56 (1670002): wrapper (7.7.26015): starting
23:16:56 (1670002): wrapper: running run_atlas (--nthreads 4)
[2025-11-20 23:16:56] Arguments: --nthreads 4
[2025-11-20 23:16:56] Threads: 4
[2025-11-20 23:16:56] Checking for CVMFS
[2025-11-20 23:16:56] No cvmfs_config command found, will try listing directly
[2025-11-20 23:16:56] CVMFS is ok
[2025-11-20 23:16:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 23:16:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 23:16:56] Further information can be found at the LHC@home message board.
[2025-11-20 23:16:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 23:16:56] Checking for apptainer binary...
[2025-11-20 23:16:56] which: no apptainer in ((null))
[2025-11-20 23:16:56] apptainer is not installed, using version from CVMFS
[2025-11-20 23:16:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 23:16:57] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-11-20 23:16:57] apptainer works
[2025-11-20 23:16:57] Set ATHENA_PROC_NUMBER=4
[2025-11-20 23:16:57] Set ATHENA_CORE_NUMBER=4
[2025-11-20 23:16:57] Starting ATLAS job with PandaID=6893855663
[2025-11-20 23:16:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 17:14:06]  *** The last 200 lines of the pilot log: ***
[2025-11-21 17:14:06] 2025-11-21 15:59:21,942 | INFO     | monitor loop #4425: job 0:6893855663 is in state 'finished'
[2025-11-21 17:14:06] 2025-11-21 15:59:21,942 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 17:14:06] 2025-11-21 15:59:22,639 | INFO     | time since job start (63730s) is within the limit (172800.0s)
[2025-11-21 17:14:06] 2025-11-21 15:59:22,861 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-21 17:14:06] 2025-11-21 15:59:22,870 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2670.9330312500006
[2025-11-21 17:14:06] 2025-11-21 15:59:22,882 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6893855663/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 17:14:06] 2025-11-21 15:59:22,884 | INFO     | extracted standard info from prmon json
[2025-11-21 17:14:06] 2025-11-21 15:59:22,884 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 17:14:06] 2025-11-21 15:59:22,885 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 17:14:06] 2025-11-21 15:59:22,904 | INFO     | fitting pss+swap vs Time
[2025-11-21 17:14:06] 2025-11-21 15:59:22,906 | INFO     | sum of square deviations: 353857328017.2474
[2025-11-21 17:14:06] 2025-11-21 15:59:22,926 | INFO     | sum of deviations: 986056822011.736
[2025-11-21 17:14:06] 2025-11-21 15:59:22,927 | INFO     | mean x: 1763708903.1014354
[2025-11-21 17:14:06] 2025-11-21 15:59:22,927 | INFO     | mean y: 2285671.8421052634
[2025-11-21 17:14:06] 2025-11-21 15:59:22,927 | INFO     | intersect: -4912455547.989973
[2025-11-21 17:14:06] 2025-11-21 15:59:22,928 | INFO     | chi2: 4.681802938741433
[2025-11-21 17:14:06] 2025-11-21 15:59:22,929 | INFO     | sum of square deviations: 348802344637.19525
[2025-11-21 17:14:06] 2025-11-21 15:59:22,950 | INFO     | sum of deviations: 1249062577633.3901
[2025-11-21 17:14:06] 2025-11-21 15:59:22,950 | INFO     | mean x: 1763708750.601923
[2025-11-21 17:14:06] 2025-11-21 15:59:22,950 | INFO     | mean y: 2293605.703846154
[2025-11-21 17:14:06] 2025-11-21 15:59:22,950 | INFO     | intersect: -6313554415.652843
[2025-11-21 17:14:06] 2025-11-21 15:59:22,951 | INFO     | chi2: 1.8958207305796835
[2025-11-21 17:14:06] 2025-11-21 15:59:22,952 | INFO     | current chi2=1.8958207305796835 (change=59.5066098384457 %)
[2025-11-21 17:14:06] 2025-11-21 15:59:22,953 | INFO     | sum of square deviations: 343795734257.14386
[2025-11-21 17:14:06] 2025-11-21 15:59:22,973 | INFO     | sum of deviations: 1298914845544.4568
[2025-11-21 17:14:06] 2025-11-21 15:59:22,973 | INFO     | mean x: 1763708598.1024156
[2025-11-21 17:14:06] 2025-11-21 15:59:22,973 | INFO     | mean y: 2295121.1371980677
[2025-11-21 17:14:06] 2025-11-21 15:59:22,973 | INFO     | intersect: -6661275868.886003
[2025-11-21 17:14:06] 2025-11-21 15:59:22,975 | INFO     | chi2: 1.6815284603608525
[2025-11-21 17:14:06] 2025-11-21 15:59:22,975 | INFO     | current chi2=1.6815284603608525 (change=11.303403679593009 %)
[2025-11-21 17:14:06] 2025-11-21 15:59:22,975 | INFO     | right removable region: 1034
[2025-11-21 17:14:06] 2025-11-21 15:59:22,976 | INFO     | sum of square deviations: 348802279977.1954
[2025-11-21 17:14:06] 2025-11-21 15:59:22,997 | INFO     | sum of deviations: 810689670281.6958
[2025-11-21 17:14:06] 2025-11-21 15:59:22,997 | INFO     | mean x: 1763709055.601923
[2025-11-21 17:14:06] 2025-11-21 15:59:22,997 | INFO     | mean y: 2290952.851923077
[2025-11-21 17:14:06] 2025-11-21 15:59:22,997 | INFO     | intersect: -4096938882.6074247
[2025-11-21 17:14:06] 2025-11-21 15:59:22,999 | INFO     | chi2: 3.0673499559786173
[2025-11-21 17:14:06] 2025-11-21 15:59:22,999 | INFO     | current chi2=3.0673499559786173 (change=34.483574039466404 %)
[2025-11-21 17:14:06] 2025-11-21 15:59:23,000 | INFO     | sum of square deviations: 343795604937.1439
[2025-11-21 17:14:06] 2025-11-21 15:59:23,020 | INFO     | sum of deviations: 793657131563.6981
[2025-11-21 17:14:06] 2025-11-21 15:59:23,020 | INFO     | mean x: 1763709208.1024156
[2025-11-21 17:14:06] 2025-11-21 15:59:23,021 | INFO     | mean y: 2291472.04057971
[2025-11-21 17:14:06] 2025-11-21 15:59:23,021 | INFO     | intersect: -4069256770.325597
[2025-11-21 17:14:06] 2025-11-21 15:59:23,022 | INFO     | chi2: 3.0648184180741347
[2025-11-21 17:14:06] 2025-11-21 15:59:23,022 | INFO     | current chi2=3.0648184180741347 (change=0.08253176001480739 %)
[2025-11-21 17:14:06] 2025-11-21 15:59:23,022 | INFO     | left removable region: 20
[2025-11-21 17:14:06] 2025-11-21 15:59:23,023 | INFO     | sum of square deviations: 323290696710.4193
[2025-11-21 17:14:06] 2025-11-21 15:59:23,043 | INFO     | sum of deviations: 1058177187424.5083
[2025-11-21 17:14:06] 2025-11-21 15:59:23,043 | INFO     | mean x: 1763709177.6045365
[2025-11-21 17:14:06] 2025-11-21 15:59:23,043 | INFO     | mean y: 2302391.976331361
[2025-11-21 17:14:06] 2025-11-21 15:59:23,043 | INFO     | intersect: -5770572720.059677
[2025-11-21 17:14:06] 2025-11-21 15:59:23,044 | INFO     | chi2: 0.047849817027428306
[2025-11-21 17:14:06] 2025-11-21 15:59:23,045 | INFO     | current memory leak: 3.27 B/s (using 1014 data points, chi2=0.05)
[2025-11-21 17:14:06] 2025-11-21 15:59:23,046 | INFO     | could have reported an average CPU frequency of 2698 MHz (38 samples)
[2025-11-21 17:14:06] 2025-11-21 15:59:23,046 | INFO     | ..............................
[2025-11-21 17:14:06] 2025-11-21 15:59:23,046 | INFO     | . Timing measurements:
[2025-11-21 17:14:06] 2025-11-21 15:59:23,046 | INFO     | . get job = 0 s
[2025-11-21 17:14:06] 2025-11-21 15:59:23,046 | INFO     | . initial setup = 1 s
[2025-11-21 17:14:06] 2025-11-21 15:59:23,046 | INFO     | . payload setup = 8 s
[2025-11-21 17:14:06] 2025-11-21 15:59:23,047 | INFO     | . stage-in = 0 s
[2025-11-21 17:14:06] 2025-11-21 15:59:23,047 | INFO     | . payload execution = 63692 s
[2025-11-21 17:14:06] 2025-11-21 15:59:23,047 | INFO     | . stage-out = 2 s
[2025-11-21 17:14:06] 2025-11-21 15:59:23,047 | INFO     | . log creation = 0 s
[2025-11-21 17:14:06] 2025-11-21 15:59:23,047 | INFO     | ..............................
[2025-11-21 17:14:06] 2025-11-21 15:59:23,330 | INFO     | 
[2025-11-21 17:14:06] 2025-11-21 15:59:23,330 | INFO     | job summary report
[2025-11-21 17:14:06] 2025-11-21 15:59:23,330 | INFO     | --------------------------------------------------
[2025-11-21 17:14:06] 2025-11-21 15:59:23,330 | INFO     | PanDA job id: 6893855663
[2025-11-21 17:14:06] 2025-11-21 15:59:23,331 | INFO     | task id: 47523449
[2025-11-21 17:14:06] 2025-11-21 15:59:23,331 | INFO     | errors: (none)
[2025-11-21 17:14:06] 2025-11-21 15:59:23,331 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 17:14:06] 2025-11-21 15:59:23,331 | INFO     | pilot state: finished 
[2025-11-21 17:14:06] 2025-11-21 15:59:23,331 | INFO     | transexitcode: 0
[2025-11-21 17:14:06] 2025-11-21 15:59:23,331 | INFO     | exeerrorcode: 0
[2025-11-21 17:14:06] 2025-11-21 15:59:23,331 | INFO     | exeerrordiag: 
[2025-11-21 17:14:06] 2025-11-21 15:59:23,331 | INFO     | exitcode: 0
[2025-11-21 17:14:06] 2025-11-21 15:59:23,331 | INFO     | exitmsg: OK
[2025-11-21 17:14:06] 2025-11-21 15:59:23,331 | INFO     | cpuconsumptiontime: 245657 s
[2025-11-21 17:14:06] 2025-11-21 15:59:23,331 | INFO     | nevents: 1000
[2025-11-21 17:14:06] 2025-11-21 15:59:23,332 | INFO     | neventsw: 0
[2025-11-21 17:14:06] 2025-11-21 15:59:23,332 | INFO     | pid: 1681231
[2025-11-21 17:14:06] 2025-11-21 15:59:23,332 | INFO     | pgrp: 1681231
[2025-11-21 17:14:06] 2025-11-21 15:59:23,332 | INFO     | corecount: 4
[2025-11-21 17:14:06] 2025-11-21 15:59:23,332 | INFO     | event service: False
[2025-11-21 17:14:06] 2025-11-21 15:59:23,332 | INFO     | sizes: {0: 2298767, 5: 2299029, 11: 2299085, 63704: 2354607, 63705: 2354606, 63708: 2363678, 63709: 2363862, 63715: 2364108}
[2025-11-21 17:14:06] 2025-11-21 15:59:23,332 | INFO     | --------------------------------------------------
[2025-11-21 17:14:06] 2025-11-21 15:59:23,332 | INFO     | 
[2025-11-21 17:14:06] 2025-11-21 15:59:23,332 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2025-11-21 17:14:06] 2025-11-21 15:59:23,355 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 17:14:06] 2025-11-21 15:59:23,356 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 17:14:06] 2025-11-21 15:59:23,356 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 17:14:06] 2025-11-21 15:59:23,356 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 17:14:06] 2025-11-21 15:59:23,356 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 17:14:06] 2025-11-21 15:59:23,356 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 17:14:06] 2025-11-21 15:59:23,356 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 17:14:06] 2025-11-21 15:59:23,356 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 17:14:06] 2025-11-21 15:59:23,357 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 17:14:06] 2025-11-21 15:59:23,357 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 17:14:06] 2025-11-21 15:59:23,357 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 17:14:06] 2025-11-21 15:59:23,357 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 17:14:06] 2025-11-21 15:59:23,357 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 17:14:06] 2025-11-21 15:59:23,357 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 17:14:06] 2025-11-21 15:59:23,357 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 17:14:06] 2025-11-21 15:59:23,357 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 17:14:06] 2025-11-21 15:59:23,357 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 17:14:06] 2025-11-21 15:59:23,357 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 17:14:06] 2025-11-21 15:59:23,357 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 17:14:06] 2025-11-21 15:59:23,358 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 17:14:06] 2025-11-21 15:59:23,358 | INFO     | job 6893855663 has completed (purged errors)
[2025-11-21 17:14:06] 2025-11-21 15:59:23,358 | INFO     | overall cleanup function is called
[2025-11-21 17:14:06] 2025-11-21 15:59:24,372 | INFO     | --- collectZombieJob: --- 10, [1681231]
[2025-11-21 17:14:06] 2025-11-21 15:59:24,372 | INFO     | zombie collector waiting for pid 1681231
[2025-11-21 17:14:06] 2025-11-21 15:59:24,372 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 17:14:06] 2025-11-21 15:59:24,372 | INFO     | collected zombie processes
[2025-11-21 17:14:06] 2025-11-21 15:59:24,372 | INFO     | will attempt to kill all subprocesses of pid=1681231
[2025-11-21 17:14:06] 2025-11-21 15:59:24,788 | INFO     | process IDs to be killed: [1681231] (in reverse order)
[2025-11-21 17:14:06] 2025-11-21 15:59:24,926 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 17:14:06] 2025-11-21 15:59:24,927 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 17:14:06] 2025-11-21 15:59:24,942 | INFO     | did not find any defunct processes belonging to 1681231
[2025-11-21 17:14:06] 2025-11-21 15:59:24,957 | INFO     | did not find any defunct processes belonging to 1681231
[2025-11-21 17:14:06] 2025-11-21 15:59:24,958 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 17:14:06] 2025-11-21 15:59:24,958 | INFO     | ready for new job
[2025-11-21 17:14:06] 2025-11-21 15:59:24,958 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 17:14:06] 2025-11-21 15:59:24,964 | INFO     | ***************************************
[2025-11-21 17:14:06] 2025-11-21 15:59:24,964 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 17:14:06] 2025-11-21 15:59:24,964 | INFO     | ***************************************
[2025-11-21 17:14:06] 2025-11-21 15:59:24,965 | INFO     | 
[2025-11-21 17:14:06] 2025-11-21 15:59:24,969 | INFO     | architecture information:
[2025-11-21 17:14:06] 2025-11-21 15:59:24,969 | INFO     | executing command: cat /etc/os-release
[2025-11-21 17:14:06] 2025-11-21 15:59:24,998 | INFO     | cat /etc/os-release:
[2025-11-21 17:14:06] NAME="CentOS Linux"
[2025-11-21 17:14:06] VERSION="7 (Core)"
[2025-11-21 17:14:06] ID="centos"
[2025-11-21 17:14:06] ID_LIKE="rhel fedora"
[2025-11-21 17:14:06] VERSION_ID="7"
[2025-11-21 17:14:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 17:14:06] ANSI_COLOR="0;31"
[2025-11-21 17:14:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 17:14:06] HOME_URL="https://www.centos.org/"
[2025-11-21 17:14:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 17:14:06] 
[2025-11-21 17:14:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 17:14:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 17:14:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 17:14:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 17:14:06] 
[2025-11-21 17:14:06] 2025-11-21 15:59:24,998 | INFO     | ***************************************
[2025-11-21 17:14:06] 2025-11-21 15:59:25,501 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2025-11-21 17:14:06] 2025-11-21 15:59:25,529 | INFO     | sufficient remaining disk space (660222246912 B)
[2025-11-21 17:14:06] 2025-11-21 15:59:25,530 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 17:14:06] 2025-11-21 15:59:25,530 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 17:14:06] 2025-11-21 15:59:25,530 | INFO     | update_server=False
[2025-11-21 17:14:06] 2025-11-21 15:59:25,530 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 17:14:06] 2025-11-21 15:59:25,531 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 17:14:06] 2025-11-21 15:59:25,531 | INFO     | aborting loop
[2025-11-21 17:14:06] 2025-11-21 15:59:26,064 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 17:14:06] 2025-11-21 15:59:26,250 | INFO     | all payload control threads have been joined
[2025-11-21 17:14:06] 2025-11-21 15:59:26,416 | INFO     | all data control threads have been joined
[2025-11-21 17:14:06] 2025-11-21 15:59:26,535 | INFO     | [job] retrieve thread has finished
[2025-11-21 17:14:06] 2025-11-21 15:59:26,536 | INFO     | [job] job monitor thread has finished
[2025-11-21 17:14:06] 2025-11-21 15:59:26,748 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 17:14:06] 2025-11-21 15:59:26,849 | INFO     | [data] copytool_in thread has finished
[2025-11-21 17:14:06] 2025-11-21 15:59:26,924 | INFO     | [job] validate thread has finished
[2025-11-21 17:14:06] 2025-11-21 15:59:26,961 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 17:14:06] 2025-11-21 15:59:26,962 | INFO     | all job control threads have been joined
[2025-11-21 17:14:06] 2025-11-21 15:59:27,092 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 17:14:06] 2025-11-21 15:59:27,255 | INFO     | [payload] control thread has finished
[2025-11-21 17:14:06] 2025-11-21 15:59:27,322 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 17:14:06] 2025-11-21 15:59:27,421 | INFO     | [data] control thread has finished
[2025-11-21 17:14:06] 2025-11-21 15:59:27,573 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 17:14:06] 2025-11-21 15:59:27,683 | INFO     | [payload] failed_post thread has finished
[2025-11-21 17:14:06] 2025-11-21 15:59:27,912 | INFO     | [payload] validate_post thread has finished
[2025-11-21 17:14:06] 2025-11-21 15:59:27,967 | INFO     | [job] control thread has finished
[2025-11-21 17:14:06] 2025-11-21 15:59:28,069 | INFO     | [data] copytool_out thread has finished
[2025-11-21 17:14:06] 2025-11-21 15:59:28,159 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 17:14:06] 2025-11-21 15:59:29,164 | INFO     | [job] queue monitor thread has finished
[2025-11-21 17:14:06] 2025-11-21 15:59:31,098 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 17:14:06] 2025-11-21 15:59:56,226 | INFO     | PID=1674246 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 17:14:06] 2025-11-21 15:59:56,226 | INFO     | .. there are 6 such processes running
[2025-11-21 17:14:06] 2025-11-21 15:59:56,226 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 17:14:06] 2025-11-21 15:59:56,226 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 17:14:06] 2025-11-21 15:59:56,226 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 17:14:06] 2025-11-21 15:59:59,404 | INFO     | [monitor] cgroup control has ended
[2025-11-21 17:14:06] 2025-11-21 15:59:59,637 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22416827819840)>', '<ExcThread(monitor, started 22416583513856)>']
[2025-11-21 17:14:06] 2025-11-21 16:00:00,246 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 17:14:06] 2025-11-21 16:00:00,246 | INFO     | [monitor] control thread has ended
[2025-11-21 17:14:06] 2025-11-21 16:00:04,662 | INFO     | all workflow threads have been joined
[2025-11-21 17:14:06] 2025-11-21 16:00:04,662 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 17:14:06] 2025-11-21 16:00:04,662 | INFO     | traces error code: 0
[2025-11-21 17:14:06] 2025-11-21 16:00:04,663 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 17:14:06] 2025-11-21 16:00:04,839 [wrapper] ==== pilot stdout END ====
[2025-11-21 17:14:06] 2025-11-21 16:00:04,843 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 17:14:06] 2025-11-21 16:00:04,846 [wrapper] pilotpid: 1674246
[2025-11-21 17:14:06] 2025-11-21 16:00:04,850 [wrapper] Pilot exit status: 0
[2025-11-21 17:14:06] 2025-11-21 16:00:04,863 [wrapper] pandaids: 6893855663
[2025-11-21 17:14:06] 2025-11-21 16:00:04,951 [wrapper] cleanup supervisor_pilot 2745122 1674247
[2025-11-21 17:14:06] 2025-11-21 16:00:04,955 [wrapper] Test setup, not cleaning
[2025-11-21 17:14:06] 2025-11-21 16:00:04,958 [wrapper] apfmon messages muted
[2025-11-21 17:14:06] 2025-11-21 16:00:04,961 [wrapper] ==== wrapper stdout END ====
[2025-11-21 17:14:06] 2025-11-21 16:00:04,964 [wrapper] ==== wrapper stderr END ====
[2025-11-21 17:14:06]  *** Error codes and diagnostics ***
[2025-11-21 17:14:06]     "exeErrorCode": 0,
[2025-11-21 17:14:06]     "exeErrorDiag": "",
[2025-11-21 17:14:06]     "pilotErrorCode": 0,
[2025-11-21 17:14:06]     "pilotErrorDiag": "",
[2025-11-21 17:14:06]  *** Listing of results directory ***
[2025-11-21 17:14:06] total 1321484
[2025-11-21 17:14:06] -rw-r--r-- 1 boinc boinc    576529 Nov 20 13:07 pilot3.tar.gz
[2025-11-21 17:14:06] -rw-r--r-- 1 boinc boinc      5112 Nov 20 13:39 queuedata.json
[2025-11-21 17:14:06] -rwx------ 1 boinc boinc     36292 Nov 20 13:40 runpilot2-wrapper.sh
[2025-11-21 17:14:06] -rw-r--r-- 1 boinc boinc       100 Nov 20 21:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 17:14:06] -rwxr-xr-x 1 boinc boinc      7986 Nov 20 21:42 run_atlas
[2025-11-21 17:14:06] -rw-r--r-- 1 boinc boinc       105 Nov 20 21:42 job.xml
[2025-11-21 17:14:06] -rw-r--r-- 2 boinc boinc 412396500 Nov 20 23:16 EVNT.47493127._000451.pool.root.1
[2025-11-21 17:14:06] -rw-r--r-- 1 boinc boinc      6635 Nov 20 23:16 init_data.xml
[2025-11-21 17:14:06] -rw-r--r-- 2 boinc boinc     15847 Nov 20 23:16 start_atlas.sh
[2025-11-21 17:14:06] drwxrwx--x 2 boinc boinc      4096 Nov 20 23:16 shared
[2025-11-21 17:14:06] -rw-r--r-- 2 boinc boinc    590101 Nov 20 23:16 input.tar.gz
[2025-11-21 17:14:06] -rw-r--r-- 1 boinc boinc         0 Nov 20 23:16 boinc_lockfile
[2025-11-21 17:14:06] -rw-r--r-- 1 boinc boinc      2785 Nov 20 23:16 pandaJob.out
[2025-11-21 17:14:06] -rw------- 1 boinc boinc    989440 Nov 20 23:17 agis_schedconf.cvmfs.json
[2025-11-21 17:14:06] drwx------ 5 boinc boinc      4096 Nov 20 23:17 pilot3
[2025-11-21 17:14:06] -rw-r--r-- 1 boinc boinc       530 Nov 21 16:50 boinc_task_state.xml
[2025-11-21 17:14:06] -rw------- 1 boinc boinc 915680435 Nov 21 16:58 HITS.47523449._004504.pool.root.1
[2025-11-21 17:14:06] -rw------- 1 boinc boinc        95 Nov 21 16:59 pilot_heartbeat.json
[2025-11-21 17:14:06] -rw------- 1 boinc boinc      1050 Nov 21 16:59 memory_monitor_summary.json
[2025-11-21 17:14:06] -rw------- 1 boinc boinc   1526164 Nov 21 16:59 agis_ddmendpoints.agis.ALL.json
[2025-11-21 17:14:06] -rw------- 1 boinc boinc   1764551 Nov 21 16:59 log.47523449._004504.job.log.tgz.1
[2025-11-21 17:14:06] -rw------- 1 boinc boinc      8636 Nov 21 16:59 heartbeat.json
[2025-11-21 17:14:06] -rw------- 1 boinc boinc      4833 Nov 21 17:00 pilotlog.txt
[2025-11-21 17:14:06] -rw------- 1 boinc boinc   8837818 Nov 21 17:00 log.47523449._004504.job.log.1
[2025-11-21 17:14:06] -rw------- 1 boinc boinc       353 Nov 21 17:00 output.list
[2025-11-21 17:14:06] -rw-r--r-- 1 boinc boinc       620 Nov 21 17:00 runtime_log
[2025-11-21 17:14:06] -rw------- 1 boinc boinc  10618880 Nov 21 17:00 result.tar.gz
[2025-11-21 17:14:06] -rw-r--r-- 1 boinc boinc      9206 Nov 21 17:00 runtime_log.err
[2025-11-21 17:14:06] -rw------- 1 boinc boinc       670 Nov 21 17:00 A4wLDmY8Ig8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLpHKDmEzyaXm.diag
[2025-11-21 17:14:06] -rw-r--r-- 1 boinc boinc      8192 Nov 21 17:14 boinc_mmap_file
[2025-11-21 17:14:06] -rw-r--r-- 1 boinc boinc        28 Nov 21 17:14 wrapper_checkpoint.txt
[2025-11-21 17:14:06] -rw-r--r-- 1 boinc boinc     21131 Nov 21 17:14 stderr.txt
[2025-11-21 17:14:06] HITS file was successfully produced:
[2025-11-21 17:14:06] -rw------- 1 boinc boinc 915680435 Nov 21 16:58 shared/HITS.pool.root.1
[2025-11-21 17:14:06]  *** Contents of shared directory: ***
[2025-11-21 17:14:06] total 1307928
[2025-11-21 17:14:06] -rw-r--r-- 2 boinc boinc 412396500 Nov 20 23:16 ATLAS.root_0
[2025-11-21 17:14:06] -rw-r--r-- 2 boinc boinc     15847 Nov 20 23:16 start_atlas.sh
[2025-11-21 17:14:06] -rw-r--r-- 2 boinc boinc    590101 Nov 20 23:16 input.tar.gz
[2025-11-21 17:14:06] -rw------- 1 boinc boinc 915680435 Nov 21 16:58 HITS.pool.root.1
[2025-11-21 17:14:06] -rw------- 1 boinc boinc  10618880 Nov 21 17:00 result.tar.gz
17:14:08 (1670002): run_atlas exited; CPU time 248035.752198
17:14:08 (1670002): called boinc_finish(0)

</stderr_txt>
]]>

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