Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:12:18 (1028372): wrapper (7.7.26015): starting
06:12:18 (1028372): wrapper: running run_atlas (--nthreads 4)
[2025-11-27 06:12:18] Arguments: --nthreads 4
[2025-11-27 06:12:18] Threads: 4
[2025-11-27 06:12:18] Checking for CVMFS
[2025-11-27 06:12:18] No cvmfs_config command found, will try listing directly
[2025-11-27 06:12:18] CVMFS is ok
[2025-11-27 06:12:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 06:12:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 06:12:18] Further information can be found at the LHC@home message board.
[2025-11-27 06:12:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 06:12:18] Checking for apptainer binary...
[2025-11-27 06:12:18] which: no apptainer in ((null))
[2025-11-27 06:12:18] apptainer is not installed, using version from CVMFS
[2025-11-27 06:12:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 06:12:19] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-11-27 06:12:19] apptainer works
[2025-11-27 06:12:19] Set ATHENA_PROC_NUMBER=4
[2025-11-27 06:12:19] Set ATHENA_CORE_NUMBER=4
[2025-11-27 06:12:19] Starting ATLAS job with PandaID=6893833027
[2025-11-27 06:12:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
21:45:01 (1720718): wrapper (7.7.26015): starting
21:45:01 (1720718): wrapper: running run_atlas (--nthreads 4)
[2025-11-27 21:45:01] Arguments: --nthreads 4
[2025-11-27 21:45:01] Threads: 4
[2025-11-27 21:45:01] This job has been restarted, cleaning up previous attempt
[2025-11-27 21:45:01] Checking for CVMFS
[2025-11-27 21:45:01] No cvmfs_config command found, will try listing directly
[2025-11-27 21:45:01] CVMFS is ok
[2025-11-27 21:45:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 21:45:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 21:45:01] Further information can be found at the LHC@home message board.
[2025-11-27 21:45:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 21:45:01] Checking for apptainer binary...
[2025-11-27 21:45:01] which: no apptainer in ((null))
[2025-11-27 21:45:01] apptainer is not installed, using version from CVMFS
[2025-11-27 21:45:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 21:45:01] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-11-27 21:45:01] apptainer works
[2025-11-27 21:45:01] Set ATHENA_PROC_NUMBER=4
[2025-11-27 21:45:01] Set ATHENA_CORE_NUMBER=4
[2025-11-27 21:45:01] Starting ATLAS job with PandaID=6893833027
[2025-11-27 21:45:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 15:09:33]  *** The last 200 lines of the pilot log: ***
[2025-11-28 15:09:33] 2025-11-28 14:07:25,616 | INFO     | time since job start (62531s) is within the limit (172800.0s)
[2025-11-28 15:09:33] 2025-11-28 14:07:26,120 | INFO     | monitor loop #4496: job 0:6893833027 is in state 'finished'
[2025-11-28 15:09:33] 2025-11-28 14:07:26,120 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 15:09:33] 2025-11-28 14:07:26,770 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-28 15:09:33] 2025-11-28 14:07:26,780 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2728.036203125
[2025-11-28 15:09:33] 2025-11-28 14:07:26,792 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6893833027/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 15:09:33] 2025-11-28 14:07:26,793 | INFO     | extracted standard info from prmon json
[2025-11-28 15:09:33] 2025-11-28 14:07:26,793 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 15:09:33] 2025-11-28 14:07:26,793 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 15:09:33] 2025-11-28 14:07:26,811 | INFO     | fitting pss+swap vs Time
[2025-11-28 15:09:33] 2025-11-28 14:07:26,813 | INFO     | sum of square deviations: 333925484348.99896
[2025-11-28 15:09:33] 2025-11-28 14:07:26,835 | INFO     | sum of deviations: 945416008527.3278
[2025-11-28 15:09:33] 2025-11-28 14:07:26,835 | INFO     | mean x: 1764307574.0009756
[2025-11-28 15:09:33] 2025-11-28 14:07:26,835 | INFO     | mean y: 2288670.672195122
[2025-11-28 15:09:33] 2025-11-28 14:07:26,835 | INFO     | intersect: -4992851570.505793
[2025-11-28 15:09:33] 2025-11-28 14:07:26,837 | INFO     | chi2: 4.084236501428916
[2025-11-28 15:09:33] 2025-11-28 14:07:26,838 | INFO     | sum of square deviations: 329062565568.9982
[2025-11-28 15:09:33] 2025-11-28 14:07:26,859 | INFO     | sum of deviations: 1169548243279.248
[2025-11-28 15:09:33] 2025-11-28 14:07:26,859 | INFO     | mean x: 1764307421.5009804
[2025-11-28 15:09:33] 2025-11-28 14:07:26,860 | INFO     | mean y: 2295694.253921569
[2025-11-28 15:09:33] 2025-11-28 14:07:26,860 | INFO     | intersect: -6268373963.514689
[2025-11-28 15:09:33] 2025-11-28 14:07:26,861 | INFO     | chi2: 1.7753856360827776
[2025-11-28 15:09:33] 2025-11-28 14:07:26,861 | INFO     | current chi2=1.7753856360827776 (change=56.53078279228837 %)
[2025-11-28 15:09:33] 2025-11-28 14:07:26,862 | INFO     | sum of square deviations: 324247089538.999
[2025-11-28 15:09:33] 2025-11-28 14:07:26,884 | INFO     | sum of deviations: 1165184701718.505
[2025-11-28 15:09:33] 2025-11-28 14:07:26,884 | INFO     | mean x: 1764307269.0009851
[2025-11-28 15:09:33] 2025-11-28 14:07:26,884 | INFO     | mean y: 2295554.4945812807
[2025-11-28 15:09:33] 2025-11-28 14:07:26,884 | INFO     | intersect: -6337757773.026334
[2025-11-28 15:09:33] 2025-11-28 14:07:26,885 | INFO     | chi2: 1.7474955601100528
[2025-11-28 15:09:33] 2025-11-28 14:07:26,886 | INFO     | current chi2=1.7474955601100528 (change=1.5709305857774987 %)
[2025-11-28 15:09:33] 2025-11-28 14:07:26,886 | INFO     | right removable region: 1014
[2025-11-28 15:09:33] 2025-11-28 14:07:26,887 | INFO     | sum of square deviations: 329062564958.9982
[2025-11-28 15:09:33] 2025-11-28 14:07:26,908 | INFO     | sum of deviations: 770896451234.6055
[2025-11-28 15:09:33] 2025-11-28 14:07:26,908 | INFO     | mean x: 1764307726.5009804
[2025-11-28 15:09:33] 2025-11-28 14:07:26,909 | INFO     | mean y: 2294133.8950980394
[2025-11-28 15:09:33] 2025-11-28 14:07:26,909 | INFO     | intersect: -4130958049.971126
[2025-11-28 15:09:33] 2025-11-28 14:07:26,910 | INFO     | chi2: 2.448698715949136
[2025-11-28 15:09:33] 2025-11-28 14:07:26,910 | INFO     | current chi2=2.448698715949136 (change=40.04512924037501 %)
[2025-11-28 15:09:33] 2025-11-28 14:07:26,911 | INFO     | sum of square deviations: 324247088318.999
[2025-11-28 15:09:33] 2025-11-28 14:07:26,932 | INFO     | sum of deviations: 759332708410.3018
[2025-11-28 15:09:33] 2025-11-28 14:07:26,932 | INFO     | mean x: 1764307879.0009851
[2025-11-28 15:09:33] 2025-11-28 14:07:26,933 | INFO     | mean y: 2294499.6985221673
[2025-11-28 15:09:33] 2025-11-28 14:07:26,933 | INFO     | intersect: -4129420875.6865606
[2025-11-28 15:09:33] 2025-11-28 14:07:26,934 | INFO     | chi2: 2.4478166424454666
[2025-11-28 15:09:33] 2025-11-28 14:07:26,934 | INFO     | current chi2=2.4478166424454666 (change=0.03602213281380767 %)
[2025-11-28 15:09:33] 2025-11-28 14:07:26,934 | INFO     | left removable region: 20
[2025-11-28 15:09:33] 2025-11-28 14:07:26,935 | INFO     | sum of square deviations: 304534914132.4995
[2025-11-28 15:09:33] 2025-11-28 14:07:26,956 | INFO     | sum of deviations: 971131899385.369
[2025-11-28 15:09:33] 2025-11-28 14:07:26,956 | INFO     | mean x: 1764307848.5010061
[2025-11-28 15:09:33] 2025-11-28 14:07:26,956 | INFO     | mean y: 2301555.1317907446
[2025-11-28 15:09:33] 2025-11-28 14:07:26,956 | INFO     | intersect: -5623902707.509262
[2025-11-28 15:09:33] 2025-11-28 14:07:26,957 | INFO     | chi2: 0.08569231957264002
[2025-11-28 15:09:33] 2025-11-28 14:07:26,958 | INFO     | current memory leak: 3.19 B/s (using 994 data points, chi2=0.09)
[2025-11-28 15:09:33] 2025-11-28 14:07:26,959 | INFO     | could have reported an average CPU frequency of 2665 MHz (38 samples)
[2025-11-28 15:09:33] 2025-11-28 14:07:26,959 | INFO     | ..............................
[2025-11-28 15:09:33] 2025-11-28 14:07:26,959 | INFO     | . Timing measurements:
[2025-11-28 15:09:33] 2025-11-28 14:07:26,959 | INFO     | . get job = 0 s
[2025-11-28 15:09:33] 2025-11-28 14:07:26,959 | INFO     | . initial setup = 1 s
[2025-11-28 15:09:33] 2025-11-28 14:07:26,959 | INFO     | . payload setup = 6 s
[2025-11-28 15:09:33] 2025-11-28 14:07:26,959 | INFO     | . stage-in = 0 s
[2025-11-28 15:09:33] 2025-11-28 14:07:26,959 | INFO     | . payload execution = 62493 s
[2025-11-28 15:09:33] 2025-11-28 14:07:26,960 | INFO     | . stage-out = 2 s
[2025-11-28 15:09:33] 2025-11-28 14:07:26,960 | INFO     | . log creation = 0 s
[2025-11-28 15:09:33] 2025-11-28 14:07:26,960 | INFO     | ..............................
[2025-11-28 15:09:33] 2025-11-28 14:07:27,058 | INFO     | 
[2025-11-28 15:09:33] 2025-11-28 14:07:27,058 | INFO     | job summary report
[2025-11-28 15:09:33] 2025-11-28 14:07:27,058 | INFO     | --------------------------------------------------
[2025-11-28 15:09:33] 2025-11-28 14:07:27,059 | INFO     | PanDA job id: 6893833027
[2025-11-28 15:09:33] 2025-11-28 14:07:27,059 | INFO     | task id: 47523449
[2025-11-28 15:09:33] 2025-11-28 14:07:27,059 | INFO     | errors: (none)
[2025-11-28 15:09:33] 2025-11-28 14:07:27,059 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 15:09:33] 2025-11-28 14:07:27,059 | INFO     | pilot state: finished 
[2025-11-28 15:09:33] 2025-11-28 14:07:27,059 | INFO     | transexitcode: 0
[2025-11-28 15:09:33] 2025-11-28 14:07:27,059 | INFO     | exeerrorcode: 0
[2025-11-28 15:09:33] 2025-11-28 14:07:27,059 | INFO     | exeerrordiag: 
[2025-11-28 15:09:33] 2025-11-28 14:07:27,059 | INFO     | exitcode: 0
[2025-11-28 15:09:33] 2025-11-28 14:07:27,059 | INFO     | exitmsg: OK
[2025-11-28 15:09:33] 2025-11-28 14:07:27,060 | INFO     | cpuconsumptiontime: 248167 s
[2025-11-28 15:09:33] 2025-11-28 14:07:27,060 | INFO     | nevents: 1000
[2025-11-28 15:09:33] 2025-11-28 14:07:27,060 | INFO     | neventsw: 0
[2025-11-28 15:09:33] 2025-11-28 14:07:27,060 | INFO     | pid: 1732052
[2025-11-28 15:09:33] 2025-11-28 14:07:27,060 | INFO     | pgrp: 1732052
[2025-11-28 15:09:33] 2025-11-28 14:07:27,060 | INFO     | corecount: 4
[2025-11-28 15:09:33] 2025-11-28 14:07:27,060 | INFO     | event service: False
[2025-11-28 15:09:33] 2025-11-28 14:07:27,060 | INFO     | sizes: {0: 2284322, 5: 2284584, 11: 2284640, 62503: 2337679, 62506: 2346695, 62509: 2346751, 62516: 2347125}
[2025-11-28 15:09:33] 2025-11-28 14:07:27,060 | INFO     | --------------------------------------------------
[2025-11-28 15:09:33] 2025-11-28 14:07:27,060 | INFO     | 
[2025-11-28 15:09:33] 2025-11-28 14:07:27,060 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2025-11-28 15:09:33] 2025-11-28 14:07:27,083 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 15:09:33] 2025-11-28 14:07:27,084 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 15:09:33] 2025-11-28 14:07:27,084 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 15:09:33] 2025-11-28 14:07:27,084 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 15:09:33] 2025-11-28 14:07:27,084 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 15:09:33] 2025-11-28 14:07:27,084 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 15:09:33] 2025-11-28 14:07:27,084 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 15:09:33] 2025-11-28 14:07:27,084 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 15:09:33] 2025-11-28 14:07:27,084 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 15:09:33] 2025-11-28 14:07:27,084 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 15:09:33] 2025-11-28 14:07:27,084 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 15:09:33] 2025-11-28 14:07:27,084 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 15:09:33] 2025-11-28 14:07:27,085 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 15:09:33] 2025-11-28 14:07:27,085 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 15:09:33] 2025-11-28 14:07:27,085 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 15:09:33] 2025-11-28 14:07:27,085 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 15:09:33] 2025-11-28 14:07:27,085 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 15:09:33] 2025-11-28 14:07:27,085 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 15:09:33] 2025-11-28 14:07:27,085 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 15:09:33] 2025-11-28 14:07:27,085 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 15:09:33] 2025-11-28 14:07:27,085 | INFO     | job 6893833027 has completed (purged errors)
[2025-11-28 15:09:33] 2025-11-28 14:07:27,086 | INFO     | overall cleanup function is called
[2025-11-28 15:09:33] 2025-11-28 14:07:28,099 | INFO     | --- collectZombieJob: --- 10, [1732052]
[2025-11-28 15:09:33] 2025-11-28 14:07:28,100 | INFO     | zombie collector waiting for pid 1732052
[2025-11-28 15:09:33] 2025-11-28 14:07:28,100 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 15:09:33] 2025-11-28 14:07:28,100 | INFO     | collected zombie processes
[2025-11-28 15:09:33] 2025-11-28 14:07:28,100 | INFO     | will attempt to kill all subprocesses of pid=1732052
[2025-11-28 15:09:33] 2025-11-28 14:07:28,474 | INFO     | process IDs to be killed: [1732052] (in reverse order)
[2025-11-28 15:09:33] 2025-11-28 14:07:28,588 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 15:09:33] 2025-11-28 14:07:28,589 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 15:09:33] 2025-11-28 14:07:28,602 | INFO     | did not find any defunct processes belonging to 1732052
[2025-11-28 15:09:33] 2025-11-28 14:07:28,615 | INFO     | did not find any defunct processes belonging to 1732052
[2025-11-28 15:09:33] 2025-11-28 14:07:28,616 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 15:09:33] 2025-11-28 14:07:28,616 | INFO     | ready for new job
[2025-11-28 15:09:33] 2025-11-28 14:07:28,617 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 15:09:33] 2025-11-28 14:07:28,622 | INFO     | ***************************************
[2025-11-28 15:09:33] 2025-11-28 14:07:28,622 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 15:09:33] 2025-11-28 14:07:28,622 | INFO     | ***************************************
[2025-11-28 15:09:33] 2025-11-28 14:07:28,622 | INFO     | 
[2025-11-28 15:09:33] 2025-11-28 14:07:28,626 | INFO     | architecture information:
[2025-11-28 15:09:33] 2025-11-28 14:07:28,627 | INFO     | executing command: cat /etc/os-release
[2025-11-28 15:09:33] 2025-11-28 14:07:28,641 | INFO     | cat /etc/os-release:
[2025-11-28 15:09:33] NAME="CentOS Linux"
[2025-11-28 15:09:33] VERSION="7 (Core)"
[2025-11-28 15:09:33] ID="centos"
[2025-11-28 15:09:33] ID_LIKE="rhel fedora"
[2025-11-28 15:09:33] VERSION_ID="7"
[2025-11-28 15:09:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 15:09:33] ANSI_COLOR="0;31"
[2025-11-28 15:09:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 15:09:33] HOME_URL="https://www.centos.org/"
[2025-11-28 15:09:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 15:09:33] 
[2025-11-28 15:09:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 15:09:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 15:09:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 15:09:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 15:09:33] 
[2025-11-28 15:09:33] 2025-11-28 14:07:28,641 | INFO     | ***************************************
[2025-11-28 15:09:33] 2025-11-28 14:07:29,144 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2025-11-28 15:09:33] 2025-11-28 14:07:29,159 | INFO     | sufficient remaining disk space (649722855424 B)
[2025-11-28 15:09:33] 2025-11-28 14:07:29,160 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 15:09:33] 2025-11-28 14:07:29,160 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 15:09:33] 2025-11-28 14:07:29,160 | INFO     | update_server=False
[2025-11-28 15:09:33] 2025-11-28 14:07:29,160 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 15:09:33] 2025-11-28 14:07:29,485 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 15:09:33] 2025-11-28 14:07:29,628 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 15:09:33] 2025-11-28 14:07:29,628 | INFO     | aborting loop
[2025-11-28 15:09:33] 2025-11-28 14:07:29,790 | INFO     | all job control threads have been joined
[2025-11-28 15:09:33] 2025-11-28 14:07:29,799 | INFO     | all payload control threads have been joined
[2025-11-28 15:09:33] 2025-11-28 14:07:30,035 | INFO     | all data control threads have been joined
[2025-11-28 15:09:33] 2025-11-28 14:07:30,165 | INFO     | [job] retrieve thread has finished
[2025-11-28 15:09:33] 2025-11-28 14:07:30,192 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 15:09:33] 2025-11-28 14:07:30,293 | INFO     | [data] copytool_in thread has finished
[2025-11-28 15:09:33] 2025-11-28 14:07:30,413 | INFO     | [job] validate thread has finished
[2025-11-28 15:09:33] 2025-11-28 14:07:30,545 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 15:09:33] 2025-11-28 14:07:30,591 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 15:09:33] 2025-11-28 14:07:30,633 | INFO     | [job] job monitor thread has finished
[2025-11-28 15:09:33] 2025-11-28 14:07:30,796 | INFO     | [job] control thread has finished
[2025-11-28 15:09:33] 2025-11-28 14:07:30,802 | INFO     | [payload] control thread has finished
[2025-11-28 15:09:33] 2025-11-28 14:07:30,853 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 15:09:33] 2025-11-28 14:07:30,894 | INFO     | [payload] validate_post thread has finished
[2025-11-28 15:09:33] 2025-11-28 14:07:31,040 | INFO     | [data] control thread has finished
[2025-11-28 15:09:33] 2025-11-28 14:07:31,192 | INFO     | [payload] failed_post thread has finished
[2025-11-28 15:09:33] 2025-11-28 14:07:31,212 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 15:09:33] 2025-11-28 14:07:31,491 | INFO     | [data] copytool_out thread has finished
[2025-11-28 15:09:33] 2025-11-28 14:07:32,069 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 15:09:33] 2025-11-28 14:07:33,074 | INFO     | [job] queue monitor thread has finished
[2025-11-28 15:09:33] 2025-11-28 14:07:34,198 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 15:09:33] 2025-11-28 14:07:54,111 | INFO     | [monitor] cgroup control has ended
[2025-11-28 15:09:33] 2025-11-28 14:07:55,762 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22937943410496)>', '<ExcThread(monitor, started 22937698518784)>']
[2025-11-28 15:09:33] 2025-11-28 14:07:59,221 | INFO     | PID=1725177 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 15:09:33] 2025-11-28 14:07:59,222 | INFO     | .. there are 3 such processes running
[2025-11-28 15:09:33] 2025-11-28 14:07:59,222 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 15:09:33] 2025-11-28 14:07:59,223 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 15:09:33] 2025-11-28 14:07:59,223 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 15:09:33] 2025-11-28 14:07:59,223 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 15:09:33] 2025-11-28 14:07:59,223 | INFO     | [monitor] control thread has ended
[2025-11-28 15:09:33] 2025-11-28 14:08:00,784 | INFO     | all workflow threads have been joined
[2025-11-28 15:09:33] 2025-11-28 14:08:00,784 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 15:09:33] 2025-11-28 14:08:00,784 | INFO     | traces error code: 0
[2025-11-28 15:09:33] 2025-11-28 14:08:00,785 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 15:09:33] 2025-11-28 14:08:00,989 [wrapper] ==== pilot stdout END ====
[2025-11-28 15:09:33] 2025-11-28 14:08:00,992 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 15:09:33] 2025-11-28 14:08:00,995 [wrapper] pilotpid: 1725177
[2025-11-28 15:09:33] 2025-11-28 14:08:00,997 [wrapper] Pilot exit status: 0
[2025-11-28 15:09:33] 2025-11-28 14:08:01,007 [wrapper] pandaids: 6893833027 6893833027
[2025-11-28 15:09:33] 2025-11-28 14:08:01,085 [wrapper] cleanup supervisor_pilot 2530311 1725178
[2025-11-28 15:09:33] 2025-11-28 14:08:01,087 [wrapper] Test setup, not cleaning
[2025-11-28 15:09:33] 2025-11-28 14:08:01,090 [wrapper] apfmon messages muted
[2025-11-28 15:09:33] 2025-11-28 14:08:01,094 [wrapper] ==== wrapper stdout END ====
[2025-11-28 15:09:33] 2025-11-28 14:08:01,096 [wrapper] ==== wrapper stderr END ====
[2025-11-28 15:09:33]  *** Error codes and diagnostics ***
[2025-11-28 15:09:33]     "exeErrorCode": 0,
[2025-11-28 15:09:33]     "exeErrorDiag": "",
[2025-11-28 15:09:33]     "pilotErrorCode": 0,
[2025-11-28 15:09:33]     "pilotErrorDiag": "",
[2025-11-28 15:09:33]  *** Listing of results directory ***
[2025-11-28 15:09:33] total 1723100
[2025-11-28 15:09:33] drwx------ 5 boinc boinc      4096 Nov  5 18:16 pilot3
[2025-11-28 15:09:33] -rw-r--r-- 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-28 15:09:33] -rw-r--r-- 1 boinc boinc      5112 Nov 20 11:11 queuedata.json
[2025-11-28 15:09:33] -rwx------ 1 boinc boinc     36292 Nov 20 11:11 runpilot2-wrapper.sh
[2025-11-28 15:09:33] -rw-r--r-- 1 boinc boinc       100 Nov 27 06:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 15:09:33] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 06:12 run_atlas
[2025-11-28 15:09:33] -rw-r--r-- 1 boinc boinc       105 Nov 27 06:12 job.xml
[2025-11-28 15:09:33] -rw-r--r-- 3 boinc boinc 409584985 Nov 27 06:12 EVNT.47493127._000028.pool.root.1
[2025-11-28 15:09:33] -rw-r--r-- 3 boinc boinc 409584985 Nov 27 06:12 ATLAS.root_0
[2025-11-28 15:09:33] -rw-r--r-- 2 boinc boinc     15847 Nov 27 06:12 start_atlas.sh
[2025-11-28 15:09:33] drwxrwx--x 2 boinc boinc      4096 Nov 27 06:12 shared
[2025-11-28 15:09:33] -rw-r--r-- 2 boinc boinc    590099 Nov 27 06:12 input.tar.gz
[2025-11-28 15:09:33] -rw-r--r-- 1 boinc boinc         0 Nov 27 06:12 boinc_lockfile
[2025-11-28 15:09:33] -rw-r--r-- 1 boinc boinc      2784 Nov 27 21:45 pandaJob.out
[2025-11-28 15:09:33] -rw------- 1 boinc boinc    991500 Nov 27 21:45 agis_schedconf.cvmfs.json
[2025-11-28 15:09:33] -rw-r--r-- 1 boinc boinc      6644 Nov 28 02:13 init_data.xml
[2025-11-28 15:09:33] -rw-r--r-- 1 boinc boinc       532 Nov 28 15:01 boinc_task_state.xml
[2025-11-28 15:09:33] -rw------- 1 boinc boinc 920325131 Nov 28 15:06 HITS.47523449._000276.pool.root.1
[2025-11-28 15:09:33] -rw------- 1 boinc boinc      1054 Nov 28 15:07 memory_monitor_summary.json
[2025-11-28 15:09:33] -rw------- 1 boinc boinc   1516240 Nov 28 15:07 agis_ddmendpoints.agis.ALL.json
[2025-11-28 15:09:33] -rw------- 1 boinc boinc   1757109 Nov 28 15:07 log.47523449._000276.job.log.tgz.1
[2025-11-28 15:09:33] -rw------- 1 boinc boinc      8643 Nov 28 15:07 heartbeat.json
[2025-11-28 15:09:33] -rw------- 1 boinc boinc        97 Nov 28 15:07 pilot_heartbeat.json
[2025-11-28 15:09:33] -rw------- 1 boinc boinc      4833 Nov 28 15:08 pilotlog.txt
[2025-11-28 15:09:33] -rw------- 1 boinc boinc   8758687 Nov 28 15:08 log.47523449._000276.job.log.1
[2025-11-28 15:09:33] -rw------- 1 boinc boinc       353 Nov 28 15:08 output.list
[2025-11-28 15:09:33] -rw-r--r-- 1 boinc boinc       620 Nov 28 15:08 runtime_log
[2025-11-28 15:09:33] -rw------- 1 boinc boinc  10536960 Nov 28 15:08 result.tar.gz
[2025-11-28 15:09:33] -rw-r--r-- 1 boinc boinc      9283 Nov 28 15:08 runtime_log.err
[2025-11-28 15:09:33] -rw------- 1 boinc boinc       798 Nov 28 15:08 JSWMDmeoGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmd9GKDmyqD8am.diag
[2025-11-28 15:09:33] -rw-r--r-- 1 boinc boinc        28 Nov 28 15:09 wrapper_checkpoint.txt
[2025-11-28 15:09:33] -rw-r--r-- 1 boinc boinc      8192 Nov 28 15:09 boinc_mmap_file
[2025-11-28 15:09:33] -rw-r--r-- 1 boinc boinc     23022 Nov 28 15:09 stderr.txt
[2025-11-28 15:09:33] HITS file was successfully produced:
[2025-11-28 15:09:33] -rw------- 1 boinc boinc 920325131 Nov 28 15:06 shared/HITS.pool.root.1
[2025-11-28 15:09:33]  *** Contents of shared directory: ***
[2025-11-28 15:09:33] total 1309640
[2025-11-28 15:09:33] -rw-r--r-- 3 boinc boinc 409584985 Nov 27 06:12 ATLAS.root_0
[2025-11-28 15:09:33] -rw-r--r-- 2 boinc boinc     15847 Nov 27 06:12 start_atlas.sh
[2025-11-28 15:09:33] -rw-r--r-- 2 boinc boinc    590099 Nov 27 06:12 input.tar.gz
[2025-11-28 15:09:33] -rw------- 1 boinc boinc 920325131 Nov 28 15:06 HITS.pool.root.1
[2025-11-28 15:09:33] -rw------- 1 boinc boinc  10536960 Nov 28 15:08 result.tar.gz
15:09:35 (1720718): run_atlas exited; CPU time 250561.549806
15:09:35 (1720718): called boinc_finish(0)

</stderr_txt>
]]>

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