Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:30:20 (543581): wrapper (7.7.26015): starting
23:30:20 (543581): wrapper: running run_atlas (--nthreads 4)
[2025-11-26 23:30:21] Arguments: --nthreads 4
[2025-11-26 23:30:21] Threads: 4
[2025-11-26 23:30:21] Checking for CVMFS
[2025-11-26 23:30:21] No cvmfs_config command found, will try listing directly
[2025-11-26 23:30:21] CVMFS is ok
[2025-11-26 23:30:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 23:30:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 23:30:21] Further information can be found at the LHC@home message board.
[2025-11-26 23:30:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 23:30:21] Checking for apptainer binary...
[2025-11-26 23:30:21] which: no apptainer in ((null))
[2025-11-26 23:30:21] apptainer is not installed, using version from CVMFS
[2025-11-26 23:30:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 23:30:21] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-11-26 23:30:21] apptainer works
[2025-11-26 23:30:21] Set ATHENA_PROC_NUMBER=4
[2025-11-26 23:30:21] Set ATHENA_CORE_NUMBER=4
[2025-11-26 23:30:21] Starting ATLAS job with PandaID=6893855226
[2025-11-26 23:30:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 16:36:44]  *** The last 200 lines of the pilot log: ***
[2025-11-27 16:36:44] 2025-11-27 15:34:39,086 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 16:36:44] 2025-11-27 15:34:39,086 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 16:36:44] 2025-11-27 15:34:39,099 | INFO     | fitting pss+swap vs Time
[2025-11-27 16:36:44] 2025-11-27 15:34:39,101 | INFO     | sum of square deviations: 316640459688.0
[2025-11-27 16:36:44] 2025-11-27 15:34:39,114 | INFO     | sum of deviations: 1022835928831.9991
[2025-11-27 16:36:44] 2025-11-27 15:34:39,114 | INFO     | mean x: 1764226944.0
[2025-11-27 16:36:44] 2025-11-27 15:34:39,114 | INFO     | mean y: 2302212.9632571996
[2025-11-27 16:36:44] 2025-11-27 15:34:39,115 | INFO     | intersect: -5696636914.129813
[2025-11-27 16:36:44] 2025-11-27 15:34:39,115 | INFO     | chi2: 3.513666778074598
[2025-11-27 16:36:44] 2025-11-27 15:34:39,116 | INFO     | sum of square deviations: 311947246110.5
[2025-11-27 16:36:44] 2025-11-27 15:34:39,129 | INFO     | sum of deviations: 1213021517985.5
[2025-11-27 16:36:44] 2025-11-27 15:34:39,130 | INFO     | mean x: 1764226791.5
[2025-11-27 16:36:44] 2025-11-27 15:34:39,130 | INFO     | mean y: 2308389.47005988
[2025-11-27 16:36:44] 2025-11-27 15:34:39,130 | INFO     | intersect: -6857970351.179432
[2025-11-27 16:36:44] 2025-11-27 15:34:39,131 | INFO     | chi2: 1.839542109945394
[2025-11-27 16:36:44] 2025-11-27 15:34:39,131 | INFO     | current chi2=1.839542109945394 (change=47.64608523994933 %)
[2025-11-27 16:36:44] 2025-11-27 15:34:39,132 | INFO     | sum of square deviations: 307300638058.0
[2025-11-27 16:36:44] 2025-11-27 15:34:39,146 | INFO     | sum of deviations: 1212202945047.0005
[2025-11-27 16:36:44] 2025-11-27 15:34:39,147 | INFO     | mean x: 1764226639.0
[2025-11-27 16:36:44] 2025-11-27 15:34:39,147 | INFO     | mean y: 2308361.423269809
[2025-11-27 16:36:44] 2025-11-27 15:34:39,147 | INFO     | intersect: -6957002693.188114
[2025-11-27 16:36:44] 2025-11-27 15:34:39,148 | INFO     | chi2: 1.8220318726695168
[2025-11-27 16:36:44] 2025-11-27 15:34:39,148 | INFO     | current chi2=1.8220318726695168 (change=0.9518802087328606 %)
[2025-11-27 16:36:44] 2025-11-27 15:34:39,148 | INFO     | right removable region: 996
[2025-11-27 16:36:44] 2025-11-27 15:34:39,149 | INFO     | sum of square deviations: 311947246110.5
[2025-11-27 16:36:44] 2025-11-27 15:34:39,162 | INFO     | sum of deviations: 845022501046.0
[2025-11-27 16:36:44] 2025-11-27 15:34:39,162 | INFO     | mean x: 1764227096.5
[2025-11-27 16:36:44] 2025-11-27 15:34:39,162 | INFO     | mean y: 2307980.7804391216
[2025-11-27 16:36:44] 2025-11-27 15:34:39,162 | INFO     | intersect: -4776742362.14026
[2025-11-27 16:36:44] 2025-11-27 15:34:39,163 | INFO     | chi2: 1.8123129275398506
[2025-11-27 16:36:44] 2025-11-27 15:34:39,163 | INFO     | current chi2=1.8123129275398506 (change=48.42103585778976 %)
[2025-11-27 16:36:44] 2025-11-27 15:34:39,164 | INFO     | sum of square deviations: 307300638058.0
[2025-11-27 16:36:44] 2025-11-27 15:34:39,177 | INFO     | sum of deviations: 828362830390.9999
[2025-11-27 16:36:44] 2025-11-27 15:34:39,177 | INFO     | mean x: 1764227249.0
[2025-11-27 16:36:44] 2025-11-27 15:34:39,177 | INFO     | mean y: 2308527.1283851555
[2025-11-27 16:36:44] 2025-11-27 15:34:39,177 | INFO     | intersect: -4753360991.392882
[2025-11-27 16:36:44] 2025-11-27 15:34:39,178 | INFO     | chi2: 1.8110541636909803
[2025-11-27 16:36:44] 2025-11-27 15:34:39,178 | INFO     | current chi2=1.8110541636909803 (change=0.06945620867909856 %)
[2025-11-27 16:36:44] 2025-11-27 15:34:39,178 | INFO     | left removable region: 20
[2025-11-27 16:36:44] 2025-11-27 15:34:39,179 | INFO     | sum of square deviations: 288288568100.0
[2025-11-27 16:36:44] 2025-11-27 15:34:39,197 | INFO     | sum of deviations: 1006172813994.9999
[2025-11-27 16:36:44] 2025-11-27 15:34:39,197 | INFO     | mean x: 1764227218.5
[2025-11-27 16:36:44] 2025-11-27 15:34:39,197 | INFO     | mean y: 2315036.6024590163
[2025-11-27 16:36:44] 2025-11-27 15:34:39,198 | INFO     | intersect: -6155117693.608935
[2025-11-27 16:36:44] 2025-11-27 15:34:39,198 | INFO     | chi2: 0.10109246916600126
[2025-11-27 16:36:44] 2025-11-27 15:34:39,198 | INFO     | current memory leak: 3.49 B/s (using 976 data points, chi2=0.10)
[2025-11-27 16:36:44] 2025-11-27 15:34:39,199 | INFO     | could have reported an average CPU frequency of 2687 MHz (37 samples)
[2025-11-27 16:36:44] 2025-11-27 15:34:39,200 | INFO     | ..............................
[2025-11-27 16:36:44] 2025-11-27 15:34:39,200 | INFO     | . Timing measurements:
[2025-11-27 16:36:44] 2025-11-27 15:34:39,200 | INFO     | . get job = 0 s
[2025-11-27 16:36:44] 2025-11-27 15:34:39,200 | INFO     | . initial setup = 1 s
[2025-11-27 16:36:44] 2025-11-27 15:34:39,200 | INFO     | . payload setup = 6 s
[2025-11-27 16:36:44] 2025-11-27 15:34:39,200 | INFO     | . stage-in = 0 s
[2025-11-27 16:36:44] 2025-11-27 15:34:39,200 | INFO     | . payload execution = 61412 s
[2025-11-27 16:36:44] 2025-11-27 15:34:39,200 | INFO     | . stage-out = 2 s
[2025-11-27 16:36:44] 2025-11-27 15:34:39,200 | INFO     | . log creation = 0 s
[2025-11-27 16:36:44] 2025-11-27 15:34:39,200 | INFO     | ..............................
[2025-11-27 16:36:44] 2025-11-27 15:34:39,201 | INFO     | size of work directory /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6893855226: 5906805 B (within 2537553920 B limit)
[2025-11-27 16:36:44] 2025-11-27 15:34:39,222 | INFO     | pfn file=/scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6893855226/HITS.47523449._004409.pool.root.1 does not exist (skip from workdir size calculation)
[2025-11-27 16:36:44] 2025-11-27 15:34:39,233 | INFO     | total size of present files: 0 B (workdir size: 5906805 B)
[2025-11-27 16:36:44] 2025-11-27 15:34:39,249 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6893855226/HITS.47523449._004409.pool.root.1 since it does not exist
[2025-11-27 16:36:44] 2025-11-27 15:34:39,262 | INFO     | 
[2025-11-27 16:36:44] 2025-11-27 15:34:39,262 | INFO     | job summary report
[2025-11-27 16:36:44] 2025-11-27 15:34:39,262 | INFO     | --------------------------------------------------
[2025-11-27 16:36:44] 2025-11-27 15:34:39,263 | INFO     | PanDA job id: 6893855226
[2025-11-27 16:36:44] 2025-11-27 15:34:39,263 | INFO     | task id: 47523449
[2025-11-27 16:36:44] 2025-11-27 15:34:39,263 | INFO     | errors: (none)
[2025-11-27 16:36:44] 2025-11-27 15:34:39,263 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 16:36:44] 2025-11-27 15:34:39,263 | INFO     | pilot state: finished 
[2025-11-27 16:36:44] 2025-11-27 15:34:39,263 | INFO     | transexitcode: 0
[2025-11-27 16:36:44] 2025-11-27 15:34:39,263 | INFO     | exeerrorcode: 0
[2025-11-27 16:36:44] 2025-11-27 15:34:39,263 | INFO     | exeerrordiag: 
[2025-11-27 16:36:44] 2025-11-27 15:34:39,263 | INFO     | exitcode: 0
[2025-11-27 16:36:44] 2025-11-27 15:34:39,263 | INFO     | exitmsg: OK
[2025-11-27 16:36:44] 2025-11-27 15:34:39,263 | INFO     | cpuconsumptiontime: 243770 s
[2025-11-27 16:36:44] 2025-11-27 15:34:39,263 | INFO     | nevents: 1000
[2025-11-27 16:36:44] 2025-11-27 15:34:39,263 | INFO     | neventsw: 0
[2025-11-27 16:36:44] 2025-11-27 15:34:39,263 | INFO     | pid: 554784
[2025-11-27 16:36:44] 2025-11-27 15:34:39,263 | INFO     | pgrp: 554784
[2025-11-27 16:36:44] 2025-11-27 15:34:39,264 | INFO     | corecount: 4
[2025-11-27 16:36:44] 2025-11-27 15:34:39,264 | INFO     | event service: False
[2025-11-27 16:36:44] 2025-11-27 15:34:39,264 | INFO     | sizes: {0: 2284326, 1: 2284326, 5: 2284616, 11: 2284672, 61419: 2337296, 61422: 2346312, 61425: 2346496, 61430: 2346770}
[2025-11-27 16:36:44] 2025-11-27 15:34:39,264 | INFO     | --------------------------------------------------
[2025-11-27 16:36:44] 2025-11-27 15:34:39,264 | INFO     | 
[2025-11-27 16:36:44] 2025-11-27 15:34:39,264 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-11-27 16:36:44] 2025-11-27 15:34:39,283 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 16:36:44] 2025-11-27 15:34:39,284 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 16:36:44] 2025-11-27 15:34:39,284 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 16:36:44] 2025-11-27 15:34:39,284 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 16:36:44] 2025-11-27 15:34:39,284 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 16:36:44] 2025-11-27 15:34:39,284 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 16:36:44] 2025-11-27 15:34:39,285 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 16:36:44] 2025-11-27 15:34:39,285 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 16:36:44] 2025-11-27 15:34:39,285 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 16:36:44] 2025-11-27 15:34:39,285 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 16:36:44] 2025-11-27 15:34:39,285 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 16:36:44] 2025-11-27 15:34:39,285 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 16:36:44] 2025-11-27 15:34:39,285 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 16:36:44] 2025-11-27 15:34:39,285 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 16:36:44] 2025-11-27 15:34:39,285 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 16:36:44] 2025-11-27 15:34:39,286 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 16:36:44] 2025-11-27 15:34:39,286 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 16:36:44] 2025-11-27 15:34:39,286 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 16:36:44] 2025-11-27 15:34:39,286 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 16:36:44] 2025-11-27 15:34:39,286 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 16:36:44] 2025-11-27 15:34:39,286 | INFO     | job 6893855226 has completed (purged errors)
[2025-11-27 16:36:44] 2025-11-27 15:34:39,286 | INFO     | overall cleanup function is called
[2025-11-27 16:36:44] 2025-11-27 15:34:39,558 | INFO     | number of running child processes to parent process 554784: 1
[2025-11-27 16:36:44] 2025-11-27 15:34:39,558 | INFO     | maximum number of monitored processes: 12
[2025-11-27 16:36:44] 2025-11-27 15:34:39,558 | INFO     | aborting job monitoring since job object (job id=6893855226) has expired
[2025-11-27 16:36:44] 2025-11-27 15:34:40,300 | INFO     | --- collectZombieJob: --- 10, [554784]
[2025-11-27 16:36:44] 2025-11-27 15:34:40,300 | INFO     | zombie collector waiting for pid 554784
[2025-11-27 16:36:44] 2025-11-27 15:34:40,300 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 16:36:44] 2025-11-27 15:34:40,300 | INFO     | collected zombie processes
[2025-11-27 16:36:44] 2025-11-27 15:34:40,301 | INFO     | will attempt to kill all subprocesses of pid=554784
[2025-11-27 16:36:44] 2025-11-27 15:34:40,706 | INFO     | process IDs to be killed: [554784] (in reverse order)
[2025-11-27 16:36:44] 2025-11-27 15:34:40,824 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 16:36:44] 2025-11-27 15:34:40,824 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 16:36:44] 2025-11-27 15:34:40,838 | INFO     | did not find any defunct processes belonging to 554784
[2025-11-27 16:36:44] 2025-11-27 15:34:40,851 | INFO     | did not find any defunct processes belonging to 554784
[2025-11-27 16:36:44] 2025-11-27 15:34:40,853 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 16:36:44] 2025-11-27 15:34:40,853 | INFO     | ready for new job
[2025-11-27 16:36:44] 2025-11-27 15:34:40,853 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 16:36:44] 2025-11-27 15:34:40,859 | INFO     | ***************************************
[2025-11-27 16:36:44] 2025-11-27 15:34:40,859 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 16:36:44] 2025-11-27 15:34:40,859 | INFO     | ***************************************
[2025-11-27 16:36:44] 2025-11-27 15:34:40,859 | INFO     | 
[2025-11-27 16:36:44] 2025-11-27 15:34:40,863 | INFO     | architecture information:
[2025-11-27 16:36:44] 2025-11-27 15:34:40,864 | INFO     | executing command: cat /etc/os-release
[2025-11-27 16:36:44] 2025-11-27 15:34:40,879 | INFO     | cat /etc/os-release:
[2025-11-27 16:36:44] NAME="CentOS Linux"
[2025-11-27 16:36:44] VERSION="7 (Core)"
[2025-11-27 16:36:44] ID="centos"
[2025-11-27 16:36:44] ID_LIKE="rhel fedora"
[2025-11-27 16:36:44] VERSION_ID="7"
[2025-11-27 16:36:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 16:36:44] ANSI_COLOR="0;31"
[2025-11-27 16:36:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 16:36:44] HOME_URL="https://www.centos.org/"
[2025-11-27 16:36:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 16:36:44] 
[2025-11-27 16:36:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 16:36:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 16:36:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 16:36:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 16:36:44] 
[2025-11-27 16:36:44] 2025-11-27 15:34:40,879 | INFO     | ***************************************
[2025-11-27 16:36:44] 2025-11-27 15:34:41,381 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-11-27 16:36:44] 2025-11-27 15:34:41,397 | INFO     | sufficient remaining disk space (679522336768 B)
[2025-11-27 16:36:44] 2025-11-27 15:34:41,397 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 16:36:44] 2025-11-27 15:34:41,397 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 16:36:44] 2025-11-27 15:34:41,398 | INFO     | update_server=False
[2025-11-27 16:36:44] 2025-11-27 15:34:41,398 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 16:36:44] 2025-11-27 15:34:41,398 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 16:36:44] 2025-11-27 15:34:41,398 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 16:36:44] 2025-11-27 15:34:41,399 | INFO     | aborting loop
[2025-11-27 16:36:44] 2025-11-27 15:34:41,617 | INFO     | all data control threads have been joined
[2025-11-27 16:36:44] 2025-11-27 15:34:42,395 | INFO     | all payload control threads have been joined
[2025-11-27 16:36:44] 2025-11-27 15:34:42,403 | INFO     | [job] retrieve thread has finished
[2025-11-27 16:36:44] 2025-11-27 15:34:42,404 | INFO     | [job] job monitor thread has finished
[2025-11-27 16:36:44] 2025-11-27 15:34:42,455 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 16:36:44] 2025-11-27 15:34:42,456 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 16:36:44] 2025-11-27 15:34:42,456 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 16:36:44] 2025-11-27 15:34:42,603 | INFO     | all job control threads have been joined
[2025-11-27 16:36:44] 2025-11-27 15:34:42,622 | INFO     | [data] control thread has finished
[2025-11-27 16:36:44] 2025-11-27 15:34:42,792 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 16:36:44] 2025-11-27 15:34:42,808 | INFO     | [payload] failed_post thread has finished
[2025-11-27 16:36:44] 2025-11-27 15:34:43,238 | INFO     | [data] copytool_in thread has finished
[2025-11-27 16:36:44] 2025-11-27 15:34:43,401 | INFO     | [payload] control thread has finished
[2025-11-27 16:36:44] 2025-11-27 15:34:43,404 | INFO     | [data] copytool_out thread has finished
[2025-11-27 16:36:44] 2025-11-27 15:34:43,450 | INFO     | [payload] validate_post thread has finished
[2025-11-27 16:36:44] 2025-11-27 15:34:43,496 | INFO     | [job] validate thread has finished
[2025-11-27 16:36:44] 2025-11-27 15:34:43,609 | INFO     | [job] control thread has finished
[2025-11-27 16:36:44] 2025-11-27 15:34:44,033 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 16:36:44] 2025-11-27 15:34:44,272 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 16:36:44] 2025-11-27 15:34:45,277 | INFO     | [job] queue monitor thread has finished
[2025-11-27 16:36:44] 2025-11-27 15:34:48,039 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 16:36:44] 2025-11-27 15:35:10,118 | INFO     | [monitor] cgroup control has ended
[2025-11-27 16:36:44] 2025-11-27 15:35:11,124 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23029505713984)>', '<ExcThread(monitor, started 23029195175680)>']
[2025-11-27 16:36:44] 2025-11-27 15:35:11,954 | INFO     | PID=547391 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 16:36:44] 2025-11-27 15:35:11,954 | INFO     | .. there are 3 such processes running
[2025-11-27 16:36:44] 2025-11-27 15:35:11,954 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 16:36:44] 2025-11-27 15:35:11,954 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 16:36:44] 2025-11-27 15:35:11,954 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 16:36:44] 2025-11-27 15:35:11,954 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 16:36:44] 2025-11-27 15:35:11,954 | INFO     | [monitor] control thread has ended
[2025-11-27 16:36:44] 2025-11-27 15:35:16,144 | INFO     | all workflow threads have been joined
[2025-11-27 16:36:44] 2025-11-27 15:35:16,144 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 16:36:44] 2025-11-27 15:35:16,145 | INFO     | traces error code: 0
[2025-11-27 16:36:44] 2025-11-27 15:35:16,145 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 16:36:44] 2025-11-27 15:35:16,322 [wrapper] ==== pilot stdout END ====
[2025-11-27 16:36:44] 2025-11-27 15:35:16,325 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 16:36:44] 2025-11-27 15:35:16,328 [wrapper] pilotpid: 547391
[2025-11-27 16:36:44] 2025-11-27 15:35:16,331 [wrapper] Pilot exit status: 0
[2025-11-27 16:36:44] 2025-11-27 15:35:16,343 [wrapper] pandaids: 6893855226
[2025-11-27 16:36:44] 2025-11-27 15:35:16,423 [wrapper] cleanup supervisor_pilot 1338828 547392
[2025-11-27 16:36:44] 2025-11-27 15:35:16,426 [wrapper] Test setup, not cleaning
[2025-11-27 16:36:44] 2025-11-27 15:35:16,428 [wrapper] apfmon messages muted
[2025-11-27 16:36:44] 2025-11-27 15:35:16,431 [wrapper] ==== wrapper stdout END ====
[2025-11-27 16:36:44] 2025-11-27 15:35:16,433 [wrapper] ==== wrapper stderr END ====
[2025-11-27 16:36:44]  *** Error codes and diagnostics ***
[2025-11-27 16:36:44]     "exeErrorCode": 0,
[2025-11-27 16:36:44]     "exeErrorDiag": "",
[2025-11-27 16:36:44]     "pilotErrorCode": 0,
[2025-11-27 16:36:44]     "pilotErrorDiag": "",
[2025-11-27 16:36:44]  *** Listing of results directory ***
[2025-11-27 16:36:44] total 1326568
[2025-11-27 16:36:44] -rw-r--r-- 1 boinc boinc    576529 Nov 20 13:07 pilot3.tar.gz
[2025-11-27 16:36:44] -rw-r--r-- 1 boinc boinc      5112 Nov 20 13:29 queuedata.json
[2025-11-27 16:36:44] -rwx------ 1 boinc boinc     36292 Nov 20 13:31 runpilot2-wrapper.sh
[2025-11-27 16:36:44] -rw-r--r-- 1 boinc boinc       100 Nov 26 23:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 16:36:44] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 23:30 run_atlas
[2025-11-27 16:36:44] -rw-r--r-- 1 boinc boinc       105 Nov 26 23:30 job.xml
[2025-11-27 16:36:44] -rw-r--r-- 2 boinc boinc 409400096 Nov 26 23:30 EVNT.47493127._000441.pool.root.1
[2025-11-27 16:36:44] -rw-r--r-- 1 boinc boinc      6635 Nov 26 23:30 init_data.xml
[2025-11-27 16:36:44] -rw-r--r-- 2 boinc boinc     15847 Nov 26 23:30 start_atlas.sh
[2025-11-27 16:36:44] drwxrwx--x 2 boinc boinc      4096 Nov 26 23:30 shared
[2025-11-27 16:36:44] -rw-r--r-- 2 boinc boinc    590102 Nov 26 23:30 input.tar.gz
[2025-11-27 16:36:44] -rw-r--r-- 1 boinc boinc         0 Nov 26 23:30 boinc_lockfile
[2025-11-27 16:36:44] -rw-r--r-- 1 boinc boinc      2786 Nov 26 23:30 pandaJob.out
[2025-11-27 16:36:44] -rw------- 1 boinc boinc    991546 Nov 26 23:30 agis_schedconf.cvmfs.json
[2025-11-27 16:36:44] drwx------ 5 boinc boinc      4096 Nov 26 23:30 pilot3
[2025-11-27 16:36:44] -rw-r--r-- 1 boinc boinc       532 Nov 27 16:27 boinc_task_state.xml
[2025-11-27 16:36:44] -rw------- 1 boinc boinc 924414274 Nov 27 16:33 HITS.47523449._004409.pool.root.1
[2025-11-27 16:36:44] -rw------- 1 boinc boinc      1044 Nov 27 16:34 memory_monitor_summary.json
[2025-11-27 16:36:44] -rw------- 1 boinc boinc   1516240 Nov 27 16:34 agis_ddmendpoints.agis.ALL.json
[2025-11-27 16:36:44] -rw------- 1 boinc boinc        95 Nov 27 16:34 pilot_heartbeat.json
[2025-11-27 16:36:44] -rw------- 1 boinc boinc   1747413 Nov 27 16:34 log.47523449._004409.job.log.tgz.1
[2025-11-27 16:36:44] -rw------- 1 boinc boinc      8629 Nov 27 16:34 heartbeat.json
[2025-11-27 16:36:44] -rw------- 1 boinc boinc      4832 Nov 27 16:35 pilotlog.txt
[2025-11-27 16:36:44] -rw------- 1 boinc boinc   8587965 Nov 27 16:35 log.47523449._004409.job.log.1
[2025-11-27 16:36:44] -rw------- 1 boinc boinc       353 Nov 27 16:35 output.list
[2025-11-27 16:36:44] -rw-r--r-- 1 boinc boinc       620 Nov 27 16:35 runtime_log
[2025-11-27 16:36:44] -rw------- 1 boinc boinc  10352640 Nov 27 16:35 result.tar.gz
[2025-11-27 16:36:44] -rw-r--r-- 1 boinc boinc      9206 Nov 27 16:35 runtime_log.err
[2025-11-27 16:36:44] -rw------- 1 boinc boinc       670 Nov 27 16:35 2gCLDmU0Ig8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm6nHKDm5lMnwn.diag
[2025-11-27 16:36:44] -rw-r--r-- 1 boinc boinc        28 Nov 27 16:36 wrapper_checkpoint.txt
[2025-11-27 16:36:44] -rw-r--r-- 1 boinc boinc      8192 Nov 27 16:36 boinc_mmap_file
[2025-11-27 16:36:44] -rw-r--r-- 1 boinc boinc     21247 Nov 27 16:36 stderr.txt
[2025-11-27 16:36:44] HITS file was successfully produced:
[2025-11-27 16:36:44] -rw------- 1 boinc boinc 924414274 Nov 27 16:33 shared/HITS.pool.root.1
[2025-11-27 16:36:44]  *** Contents of shared directory: ***
[2025-11-27 16:36:44] total 1313276
[2025-11-27 16:36:44] -rw-r--r-- 2 boinc boinc 409400096 Nov 26 23:30 ATLAS.root_0
[2025-11-27 16:36:44] -rw-r--r-- 2 boinc boinc     15847 Nov 26 23:30 start_atlas.sh
[2025-11-27 16:36:44] -rw-r--r-- 2 boinc boinc    590102 Nov 26 23:30 input.tar.gz
[2025-11-27 16:36:44] -rw------- 1 boinc boinc 924414274 Nov 27 16:33 HITS.pool.root.1
[2025-11-27 16:36:44] -rw------- 1 boinc boinc  10352640 Nov 27 16:35 result.tar.gz
16:36:46 (543581): run_atlas exited; CPU time 246115.667104
16:36:46 (543581): called boinc_finish(0)

</stderr_txt>
]]>

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