Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:27:19 (2239770): wrapper (7.7.26015): starting
15:27:19 (2239770): wrapper: running run_atlas (--nthreads 4)
[2025-11-23 15:27:19] Arguments: --nthreads 4
[2025-11-23 15:27:19] Threads: 4
[2025-11-23 15:27:19] Checking for CVMFS
[2025-11-23 15:27:19] No cvmfs_config command found, will try listing directly
[2025-11-23 15:27:19] CVMFS is ok
[2025-11-23 15:27:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 15:27:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 15:27:19] Further information can be found at the LHC@home message board.
[2025-11-23 15:27:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 15:27:19] Checking for apptainer binary...
[2025-11-23 15:27:19] which: no apptainer in ((null))
[2025-11-23 15:27:19] apptainer is not installed, using version from CVMFS
[2025-11-23 15:27:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 15:27:20] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-11-23 15:27:20] apptainer works
[2025-11-23 15:27:20] Set ATHENA_PROC_NUMBER=4
[2025-11-23 15:27:20] Set ATHENA_CORE_NUMBER=4
[2025-11-23 15:27:20] Starting ATLAS job with PandaID=6893854798
[2025-11-23 15:27:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 07:46:26]  *** The last 200 lines of the pilot log: ***
[2025-11-24 07:46:26] 2025-11-24 06:42:36,216 | INFO     | time since job start (58473s) is within the limit (172800.0s)
[2025-11-24 07:46:26] 2025-11-24 06:42:36,960 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 07:46:26] 2025-11-24 06:42:36,983 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2670.5095234375003
[2025-11-24 07:46:26] 2025-11-24 06:42:37,008 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6893854798/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 07:46:26] 2025-11-24 06:42:37,009 | INFO     | extracted standard info from prmon json
[2025-11-24 07:46:26] 2025-11-24 06:42:37,009 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 07:46:26] 2025-11-24 06:42:37,009 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 07:46:26] 2025-11-24 06:42:37,025 | INFO     | fitting pss+swap vs Time
[2025-11-24 07:46:26] 2025-11-24 06:42:37,026 | INFO     | sum of square deviations: 271776988814.44662
[2025-11-24 07:46:26] 2025-11-24 06:42:37,048 | INFO     | sum of deviations: 625580534829.9612
[2025-11-24 07:46:26] 2025-11-24 06:42:37,048 | INFO     | mean x: 1763937357.0240335
[2025-11-24 07:46:26] 2025-11-24 06:42:37,048 | INFO     | mean y: 2274103.958202717
[2025-11-24 07:46:26] 2025-11-24 06:42:37,048 | INFO     | intersect: -4057984566.3114786
[2025-11-24 07:46:26] 2025-11-24 06:42:37,049 | INFO     | chi2: 5.323181909134323
[2025-11-24 07:46:26] 2025-11-24 06:42:37,050 | INFO     | sum of square deviations: 267539372189.44415
[2025-11-24 07:46:26] 2025-11-24 06:42:37,072 | INFO     | sum of deviations: 889536586808.915
[2025-11-24 07:46:26] 2025-11-24 06:42:37,072 | INFO     | mean x: 1763937204.5241597
[2025-11-24 07:46:26] 2025-11-24 06:42:37,072 | INFO     | mean y: 2283605.112394958
[2025-11-24 07:46:26] 2025-11-24 06:42:37,072 | INFO     | intersect: -5862597766.9894
[2025-11-24 07:46:26] 2025-11-24 06:42:37,073 | INFO     | chi2: 1.953471194704138
[2025-11-24 07:46:26] 2025-11-24 06:42:37,074 | INFO     | current chi2=1.953471194704138 (change=63.302565494670105 %)
[2025-11-24 07:46:26] 2025-11-24 06:42:37,075 | INFO     | sum of square deviations: 263346035464.44174
[2025-11-24 07:46:26] 2025-11-24 06:42:37,096 | INFO     | sum of deviations: 914882919508.4485
[2025-11-24 07:46:26] 2025-11-24 06:42:37,096 | INFO     | mean x: 1763937052.0242872
[2025-11-24 07:46:26] 2025-11-24 06:42:37,096 | INFO     | mean y: 2284524.5892291446
[2025-11-24 07:46:26] 2025-11-24 06:42:37,096 | INFO     | intersect: -6125758668.234945
[2025-11-24 07:46:26] 2025-11-24 06:42:37,097 | INFO     | chi2: 1.8668877716998455
[2025-11-24 07:46:26] 2025-11-24 06:42:37,097 | INFO     | current chi2=1.8668877716998455 (change=4.4322856277082705 %)
[2025-11-24 07:46:26] 2025-11-24 06:42:37,098 | INFO     | right removable region: 946
[2025-11-24 07:46:26] 2025-11-24 06:42:37,099 | INFO     | sum of square deviations: 267539416291.4916
[2025-11-24 07:46:26] 2025-11-24 06:42:37,120 | INFO     | sum of deviations: 452799132822.8261
[2025-11-24 07:46:26] 2025-11-24 06:42:37,120 | INFO     | mean x: 1763937509.5231092
[2025-11-24 07:46:26] 2025-11-24 06:42:37,120 | INFO     | mean y: 2280311.598739496
[2025-11-24 07:46:26] 2025-11-24 06:42:37,120 | INFO     | intersect: -2983109227.3972764
[2025-11-24 07:46:26] 2025-11-24 06:42:37,121 | INFO     | chi2: 3.5790435628693325
[2025-11-24 07:46:26] 2025-11-24 06:42:37,121 | INFO     | current chi2=3.5790435628693325 (change=32.7649585536826 %)
[2025-11-24 07:46:26] 2025-11-24 06:42:37,122 | INFO     | sum of square deviations: 263346123912.5342
[2025-11-24 07:46:26] 2025-11-24 06:42:37,144 | INFO     | sum of deviations: 435598488113.8023
[2025-11-24 07:46:26] 2025-11-24 06:42:37,144 | INFO     | mean x: 1763937662.0221753
[2025-11-24 07:46:26] 2025-11-24 06:42:37,144 | INFO     | mean y: 2280936.5332629355
[2025-11-24 07:46:26] 2025-11-24 06:42:37,144 | INFO     | intersect: -2915432706.9721
[2025-11-24 07:46:26] 2025-11-24 06:42:37,145 | INFO     | chi2: 3.57476640178447
[2025-11-24 07:46:26] 2025-11-24 06:42:37,145 | INFO     | current chi2=3.57476640178447 (change=0.1195057006077179 %)
[2025-11-24 07:46:26] 2025-11-24 06:42:37,145 | INFO     | left removable region: 20
[2025-11-24 07:46:26] 2025-11-24 06:42:37,146 | INFO     | sum of square deviations: 246212483835.11063
[2025-11-24 07:46:26] 2025-11-24 06:42:37,168 | INFO     | sum of deviations: 711917563386.2075
[2025-11-24 07:46:26] 2025-11-24 06:42:37,168 | INFO     | mean x: 1763937631.5205183
[2025-11-24 07:46:26] 2025-11-24 06:42:37,168 | INFO     | mean y: 2291768.568034557
[2025-11-24 07:46:26] 2025-11-24 06:42:37,169 | INFO     | intersect: -5098092099.206617
[2025-11-24 07:46:26] 2025-11-24 06:42:37,170 | INFO     | chi2: 0.09409603552120498
[2025-11-24 07:46:26] 2025-11-24 06:42:37,170 | INFO     | current memory leak: 2.89 B/s (using 926 data points, chi2=0.09)
[2025-11-24 07:46:26] 2025-11-24 06:42:37,171 | INFO     | could have reported an average CPU frequency of 2674 MHz (36 samples)
[2025-11-24 07:46:26] 2025-11-24 06:42:37,171 | INFO     | ..............................
[2025-11-24 07:46:26] 2025-11-24 06:42:37,171 | INFO     | . Timing measurements:
[2025-11-24 07:46:26] 2025-11-24 06:42:37,171 | INFO     | . get job = 0 s
[2025-11-24 07:46:26] 2025-11-24 06:42:37,171 | INFO     | . initial setup = 2 s
[2025-11-24 07:46:26] 2025-11-24 06:42:37,171 | INFO     | . payload setup = 29 s
[2025-11-24 07:46:26] 2025-11-24 06:42:37,171 | INFO     | . stage-in = 0 s
[2025-11-24 07:46:26] 2025-11-24 06:42:37,172 | INFO     | . payload execution = 58360 s
[2025-11-24 07:46:26] 2025-11-24 06:42:37,172 | INFO     | . stage-out = 2 s
[2025-11-24 07:46:26] 2025-11-24 06:42:37,172 | INFO     | . log creation = 0 s
[2025-11-24 07:46:26] 2025-11-24 06:42:37,172 | INFO     | ..............................
[2025-11-24 07:46:26] 2025-11-24 06:42:37,384 | INFO     | 
[2025-11-24 07:46:26] 2025-11-24 06:42:37,384 | INFO     | job summary report
[2025-11-24 07:46:26] 2025-11-24 06:42:37,384 | INFO     | --------------------------------------------------
[2025-11-24 07:46:26] 2025-11-24 06:42:37,384 | INFO     | PanDA job id: 6893854798
[2025-11-24 07:46:26] 2025-11-24 06:42:37,384 | INFO     | task id: 47523449
[2025-11-24 07:46:26] 2025-11-24 06:42:37,384 | INFO     | errors: (none)
[2025-11-24 07:46:26] 2025-11-24 06:42:37,384 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 07:46:26] 2025-11-24 06:42:37,385 | INFO     | pilot state: finished 
[2025-11-24 07:46:26] 2025-11-24 06:42:37,385 | INFO     | transexitcode: 0
[2025-11-24 07:46:26] 2025-11-24 06:42:37,385 | INFO     | exeerrorcode: 0
[2025-11-24 07:46:26] 2025-11-24 06:42:37,385 | INFO     | exeerrordiag: 
[2025-11-24 07:46:26] 2025-11-24 06:42:37,385 | INFO     | exitcode: 0
[2025-11-24 07:46:26] 2025-11-24 06:42:37,385 | INFO     | exitmsg: OK
[2025-11-24 07:46:26] 2025-11-24 06:42:37,385 | INFO     | cpuconsumptiontime: 229050 s
[2025-11-24 07:46:26] 2025-11-24 06:42:37,385 | INFO     | nevents: 1000
[2025-11-24 07:46:26] 2025-11-24 06:42:37,385 | INFO     | neventsw: 0
[2025-11-24 07:46:26] 2025-11-24 06:42:37,385 | INFO     | pid: 2257070
[2025-11-24 07:46:26] 2025-11-24 06:42:37,385 | INFO     | pgrp: 2257070
[2025-11-24 07:46:26] 2025-11-24 06:42:37,385 | INFO     | corecount: 4
[2025-11-24 07:46:26] 2025-11-24 06:42:37,386 | INFO     | event service: False
[2025-11-24 07:46:26] 2025-11-24 06:42:37,386 | INFO     | sizes: {0: 2298648, 1: 2298847, 12: 2298847, 23: 2298875, 24: 2299165, 33: 2299193, 58393: 2353857, 58396: 2362875, 58397: 2362931, 58418: 2363205}
[2025-11-24 07:46:26] 2025-11-24 06:42:37,386 | INFO     | --------------------------------------------------
[2025-11-24 07:46:26] 2025-11-24 06:42:37,386 | INFO     | 
[2025-11-24 07:46:26] 2025-11-24 06:42:37,386 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2025-11-24 07:46:26] 2025-11-24 06:42:37,419 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 07:46:26] 2025-11-24 06:42:37,420 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 07:46:26] 2025-11-24 06:42:37,420 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 07:46:26] 2025-11-24 06:42:37,420 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 07:46:26] 2025-11-24 06:42:37,420 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 07:46:26] 2025-11-24 06:42:37,420 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 07:46:26] 2025-11-24 06:42:37,420 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 07:46:26] 2025-11-24 06:42:37,420 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 07:46:26] 2025-11-24 06:42:37,420 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 07:46:26] 2025-11-24 06:42:37,420 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 07:46:26] 2025-11-24 06:42:37,421 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 07:46:26] 2025-11-24 06:42:37,421 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 07:46:26] 2025-11-24 06:42:37,421 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 07:46:26] 2025-11-24 06:42:37,421 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 07:46:26] 2025-11-24 06:42:37,421 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 07:46:26] 2025-11-24 06:42:37,421 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 07:46:26] 2025-11-24 06:42:37,421 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 07:46:26] 2025-11-24 06:42:37,421 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 07:46:26] 2025-11-24 06:42:37,421 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 07:46:26] 2025-11-24 06:42:37,421 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 07:46:26] 2025-11-24 06:42:37,422 | INFO     | job 6893854798 has completed (purged errors)
[2025-11-24 07:46:26] 2025-11-24 06:42:37,422 | INFO     | overall cleanup function is called
[2025-11-24 07:46:26] 2025-11-24 06:42:38,438 | INFO     | --- collectZombieJob: --- 10, [2257070]
[2025-11-24 07:46:26] 2025-11-24 06:42:38,439 | INFO     | zombie collector waiting for pid 2257070
[2025-11-24 07:46:26] 2025-11-24 06:42:38,439 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 07:46:26] 2025-11-24 06:42:38,439 | INFO     | collected zombie processes
[2025-11-24 07:46:26] 2025-11-24 06:42:38,439 | INFO     | will attempt to kill all subprocesses of pid=2257070
[2025-11-24 07:46:26] 2025-11-24 06:42:39,423 | INFO     | process IDs to be killed: [2257070] (in reverse order)
[2025-11-24 07:46:26] 2025-11-24 06:42:39,742 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 07:46:26] 2025-11-24 06:42:39,743 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 07:46:26] 2025-11-24 06:42:39,795 | INFO     | did not find any defunct processes belonging to 2257070
[2025-11-24 07:46:26] 2025-11-24 06:42:39,827 | INFO     | did not find any defunct processes belonging to 2257070
[2025-11-24 07:46:26] 2025-11-24 06:42:39,858 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 07:46:26] 2025-11-24 06:42:39,858 | INFO     | ready for new job
[2025-11-24 07:46:26] 2025-11-24 06:42:39,859 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 07:46:26] 2025-11-24 06:42:39,865 | INFO     | ***************************************
[2025-11-24 07:46:26] 2025-11-24 06:42:39,868 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 07:46:26] 2025-11-24 06:42:39,868 | INFO     | ***************************************
[2025-11-24 07:46:26] 2025-11-24 06:42:39,868 | INFO     | 
[2025-11-24 07:46:26] 2025-11-24 06:42:39,877 | INFO     | architecture information:
[2025-11-24 07:46:26] 2025-11-24 06:42:39,882 | INFO     | executing command: cat /etc/os-release
[2025-11-24 07:46:26] 2025-11-24 06:42:39,919 | INFO     | cat /etc/os-release:
[2025-11-24 07:46:26] NAME="CentOS Linux"
[2025-11-24 07:46:26] VERSION="7 (Core)"
[2025-11-24 07:46:26] ID="centos"
[2025-11-24 07:46:26] ID_LIKE="rhel fedora"
[2025-11-24 07:46:26] VERSION_ID="7"
[2025-11-24 07:46:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 07:46:26] ANSI_COLOR="0;31"
[2025-11-24 07:46:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 07:46:26] HOME_URL="https://www.centos.org/"
[2025-11-24 07:46:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 07:46:26] 
[2025-11-24 07:46:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 07:46:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 07:46:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 07:46:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 07:46:26] 
[2025-11-24 07:46:26] 2025-11-24 06:42:39,920 | INFO     | ***************************************
[2025-11-24 07:46:26] 2025-11-24 06:42:40,423 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2025-11-24 07:46:26] 2025-11-24 06:42:40,448 | INFO     | sufficient remaining disk space (3303730577408 B)
[2025-11-24 07:46:26] 2025-11-24 06:42:40,448 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 07:46:26] 2025-11-24 06:42:40,448 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 07:46:26] 2025-11-24 06:42:40,448 | INFO     | update_server=False
[2025-11-24 07:46:26] 2025-11-24 06:42:40,449 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 07:46:26] 2025-11-24 06:42:40,958 | INFO     | all job control threads have been joined
[2025-11-24 07:46:26] 2025-11-24 06:42:41,060 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 07:46:26] 2025-11-24 06:42:41,061 | INFO     | aborting loop
[2025-11-24 07:46:26] 2025-11-24 06:42:41,172 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 07:46:26] 2025-11-24 06:42:41,209 | INFO     | all payload control threads have been joined
[2025-11-24 07:46:26] 2025-11-24 06:42:41,210 | INFO     | all data control threads have been joined
[2025-11-24 07:46:26] 2025-11-24 06:42:41,454 | INFO     | [job] retrieve thread has finished
[2025-11-24 07:46:26] 2025-11-24 06:42:41,607 | INFO     | [payload] validate_post thread has finished
[2025-11-24 07:46:26] 2025-11-24 06:42:41,611 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 07:46:26] 2025-11-24 06:42:41,964 | INFO     | [job] control thread has finished
[2025-11-24 07:46:26] 2025-11-24 06:42:41,995 | INFO     | [payload] failed_post thread has finished
[2025-11-24 07:46:26] 2025-11-24 06:42:42,002 | INFO     | [job] validate thread has finished
[2025-11-24 07:46:26] 2025-11-24 06:42:42,066 | INFO     | [job] job monitor thread has finished
[2025-11-24 07:46:26] 2025-11-24 06:42:42,215 | INFO     | [payload] control thread has finished
[2025-11-24 07:46:26] 2025-11-24 06:42:42,215 | INFO     | [data] control thread has finished
[2025-11-24 07:46:26] 2025-11-24 06:42:42,301 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 07:46:26] 2025-11-24 06:42:42,302 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 07:46:26] 2025-11-24 06:42:42,553 | INFO     | [data] copytool_in thread has finished
[2025-11-24 07:46:26] 2025-11-24 06:42:42,780 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 07:46:26] 2025-11-24 06:42:42,940 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 07:46:26] 2025-11-24 06:42:43,307 | INFO     | [job] queue monitor thread has finished
[2025-11-24 07:46:26] 2025-11-24 06:42:43,618 | INFO     | [data] copytool_out thread has finished
[2025-11-24 07:46:26] 2025-11-24 06:42:45,178 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 07:46:26] 2025-11-24 06:42:51,225 | INFO     | job.realtimelogging is not enabled
[2025-11-24 07:46:26] 2025-11-24 06:42:52,230 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 07:46:26] 2025-11-24 06:43:03,238 [wrapper] supervise_pilot (15 min periods counter: 66)
[2025-11-24 07:46:26] 2025-11-24 06:43:10,443 | INFO     | PID=2244408 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 07:46:26] 2025-11-24 06:43:10,443 | INFO     | .. there are 11 such processes running
[2025-11-24 07:46:26] 2025-11-24 06:43:10,443 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 07:46:26] 2025-11-24 06:43:10,443 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 07:46:26] 2025-11-24 06:43:10,444 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 07:46:26] 2025-11-24 06:43:39,881 | INFO     | [monitor] cgroup control has ended
[2025-11-24 07:46:26] 2025-11-24 06:43:40,886 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22631194437440)>', '<ExcThread(monitor, started 22630948095744)>']
[2025-11-24 07:46:26] 2025-11-24 06:43:41,598 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 07:46:26] 2025-11-24 06:43:41,599 | INFO     | [monitor] control thread has ended
[2025-11-24 07:46:26] 2025-11-24 06:43:45,911 | INFO     | all workflow threads have been joined
[2025-11-24 07:46:26] 2025-11-24 06:43:45,912 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 07:46:26] 2025-11-24 06:43:45,912 | INFO     | traces error code: 0
[2025-11-24 07:46:26] 2025-11-24 06:43:45,912 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 07:46:26] 2025-11-24 06:43:46,071 [wrapper] ==== pilot stdout END ====
[2025-11-24 07:46:26] 2025-11-24 06:43:46,074 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 07:46:26] 2025-11-24 06:43:46,077 [wrapper] pilotpid: 2244408
[2025-11-24 07:46:26] 2025-11-24 06:43:46,081 [wrapper] Pilot exit status: 0
[2025-11-24 07:46:26] 2025-11-24 06:43:46,130 [wrapper] pandaids: 6893854798
[2025-11-24 07:46:26] 2025-11-24 06:43:46,320 [wrapper] cleanup supervisor_pilot 3920571 2244409
[2025-11-24 07:46:26] 2025-11-24 06:43:46,325 [wrapper] Test setup, not cleaning
[2025-11-24 07:46:26] 2025-11-24 06:43:46,329 [wrapper] apfmon messages muted
[2025-11-24 07:46:26] 2025-11-24 06:43:46,334 [wrapper] ==== wrapper stdout END ====
[2025-11-24 07:46:26] 2025-11-24 06:43:46,355 [wrapper] ==== wrapper stderr END ====
[2025-11-24 07:46:26]  *** Error codes and diagnostics ***
[2025-11-24 07:46:26]     "exeErrorCode": 0,
[2025-11-24 07:46:26]     "exeErrorDiag": "",
[2025-11-24 07:46:26]     "pilotErrorCode": 0,
[2025-11-24 07:46:26]     "pilotErrorDiag": "",
[2025-11-24 07:46:26]  *** Listing of results directory ***
[2025-11-24 07:46:26] total 1325584
[2025-11-24 07:46:26] -rw-r--r-- 1 boinc boinc    576529 Nov 20 13:07 pilot3.tar.gz
[2025-11-24 07:46:26] -rw-r--r-- 1 boinc boinc      5112 Nov 20 13:22 queuedata.json
[2025-11-24 07:46:26] -rwx------ 1 boinc boinc     36292 Nov 20 13:23 runpilot2-wrapper.sh
[2025-11-24 07:46:26] -rw-r--r-- 1 boinc boinc       100 Nov 23 15:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 07:46:26] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 15:27 run_atlas
[2025-11-24 07:46:26] -rw-r--r-- 1 boinc boinc       105 Nov 23 15:27 job.xml
[2025-11-24 07:46:26] -rw-r--r-- 1 boinc boinc      6688 Nov 23 15:27 init_data.xml
[2025-11-24 07:46:26] -rw-r--r-- 2 boinc boinc 412839582 Nov 23 15:27 EVNT.47493127._000426.pool.root.1
[2025-11-24 07:46:26] -rw-r--r-- 2 boinc boinc    590100 Nov 23 15:27 input.tar.gz
[2025-11-24 07:46:26] -rw-r--r-- 2 boinc boinc     15847 Nov 23 15:27 start_atlas.sh
[2025-11-24 07:46:26] drwxrwx--x 2 boinc boinc      4096 Nov 23 15:27 shared
[2025-11-24 07:46:26] -rw-r--r-- 1 boinc boinc         0 Nov 23 15:27 boinc_lockfile
[2025-11-24 07:46:26] -rw-r--r-- 1 boinc boinc      2786 Nov 23 15:27 pandaJob.out
[2025-11-24 07:46:26] -rw------- 1 boinc boinc    989785 Nov 23 15:28 agis_schedconf.cvmfs.json
[2025-11-24 07:46:26] drwx------ 5 boinc boinc      4096 Nov 23 15:28 pilot3
[2025-11-24 07:46:26] -rw-r--r-- 1 boinc boinc       532 Nov 24 07:33 boinc_task_state.xml
[2025-11-24 07:46:26] -rw------- 1 boinc boinc 921262921 Nov 24 07:41 HITS.47523449._004255.pool.root.1
[2025-11-24 07:46:26] -rw------- 1 boinc boinc      1039 Nov 24 07:42 memory_monitor_summary.json
[2025-11-24 07:46:26] -rw------- 1 boinc boinc   1526164 Nov 24 07:42 agis_ddmendpoints.agis.ALL.json
[2025-11-24 07:46:26] -rw------- 1 boinc boinc   1687463 Nov 24 07:42 log.47523449._004255.job.log.tgz.1
[2025-11-24 07:46:26] -rw------- 1 boinc boinc        95 Nov 24 07:42 pilot_heartbeat.json
[2025-11-24 07:46:26] -rw------- 1 boinc boinc      8608 Nov 24 07:42 heartbeat.json
[2025-11-24 07:46:26] -rw------- 1 boinc boinc      4908 Nov 24 07:43 pilotlog.txt
[2025-11-24 07:46:26] -rw------- 1 boinc boinc   8002861 Nov 24 07:43 log.47523449._004255.job.log.1
[2025-11-24 07:46:26] -rw------- 1 boinc boinc       353 Nov 24 07:43 output.list
[2025-11-24 07:46:26] -rw-r--r-- 1 boinc boinc       620 Nov 24 07:43 runtime_log
[2025-11-24 07:46:26] -rw------- 1 boinc boinc   9707520 Nov 24 07:43 result.tar.gz
[2025-11-24 07:46:26] -rw------- 1 boinc boinc       671 Nov 24 07:43 yLILDmZsIg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPmHKDmWpQPLn.diag
[2025-11-24 07:46:26] -rw-r--r-- 1 boinc boinc      9223 Nov 24 07:43 runtime_log.err
[2025-11-24 07:46:26] -rw-r--r-- 1 boinc boinc        28 Nov 24 07:46 wrapper_checkpoint.txt
[2025-11-24 07:46:26] -rw-r--r-- 1 boinc boinc      8192 Nov 24 07:46 boinc_mmap_file
[2025-11-24 07:46:26] -rw-r--r-- 1 boinc boinc     21028 Nov 24 07:46 stderr.txt
[2025-11-24 07:46:26] HITS file was successfully produced:
[2025-11-24 07:46:26] -rw------- 1 boinc boinc 921262921 Nov 24 07:41 shared/HITS.pool.root.1
[2025-11-24 07:46:26]  *** Contents of shared directory: ***
[2025-11-24 07:46:26] total 1312920
[2025-11-24 07:46:26] -rw-r--r-- 2 boinc boinc 412839582 Nov 23 15:27 ATLAS.root_0
[2025-11-24 07:46:26] -rw-r--r-- 2 boinc boinc    590100 Nov 23 15:27 input.tar.gz
[2025-11-24 07:46:26] -rw-r--r-- 2 boinc boinc     15847 Nov 23 15:27 start_atlas.sh
[2025-11-24 07:46:26] -rw------- 1 boinc boinc 921262921 Nov 24 07:41 HITS.pool.root.1
[2025-11-24 07:46:26] -rw------- 1 boinc boinc   9707520 Nov 24 07:43 result.tar.gz
07:46:28 (2239770): run_atlas exited; CPU time 232098.569686
07:46:28 (2239770): called boinc_finish(0)

</stderr_txt>
]]>

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