Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:16:59 (218858): wrapper (7.7.26015): starting
23:16:59 (218858): wrapper: running run_atlas (--nthreads 4)
[2025-11-20 23:16:59] Arguments: --nthreads 4
[2025-11-20 23:16:59] Threads: 4
[2025-11-20 23:16:59] Checking for CVMFS
[2025-11-20 23:16:59] No cvmfs_config command found, will try listing directly
[2025-11-20 23:16:59] CVMFS is ok
[2025-11-20 23:16:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 23:16:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 23:16:59] Further information can be found at the LHC@home message board.
[2025-11-20 23:16:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 23:16:59] Checking for apptainer binary...
[2025-11-20 23:16:59] which: no apptainer in ((null))
[2025-11-20 23:16:59] apptainer is not installed, using version from CVMFS
[2025-11-20 23:16:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 23:16:59] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-11-20 23:16:59] apptainer works
[2025-11-20 23:16:59] Set ATHENA_PROC_NUMBER=4
[2025-11-20 23:16:59] Set ATHENA_CORE_NUMBER=4
[2025-11-20 23:16:59] Starting ATLAS job with PandaID=6893847154
[2025-11-20 23:16:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 15:21:05]  *** The last 200 lines of the pilot log: ***
[2025-11-21 15:21:05] 2025-11-21 14:05:56,830 | INFO     | monitor loop #3830: job 0:6893847154 is in state 'finished'
[2025-11-21 15:21:05] 2025-11-21 14:05:56,830 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 15:21:05] 2025-11-21 14:05:57,814 | INFO     | time since job start (56922s) is within the limit (172800.0s)
[2025-11-21 15:21:05] 2025-11-21 14:05:58,203 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 15:21:05] 2025-11-21 14:05:58,222 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2683.3042109375015
[2025-11-21 15:21:05] 2025-11-21 14:05:58,245 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6893847154/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 15:21:05] 2025-11-21 14:05:58,246 | INFO     | extracted standard info from prmon json
[2025-11-21 15:21:05] 2025-11-21 14:05:58,246 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 15:21:05] 2025-11-21 14:05:58,246 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 15:21:05] 2025-11-21 14:05:58,262 | INFO     | fitting pss+swap vs Time
[2025-11-21 15:21:05] 2025-11-21 14:05:58,263 | INFO     | sum of square deviations: 251838929077.98303
[2025-11-21 15:21:05] 2025-11-21 14:05:58,283 | INFO     | sum of deviations: 749388641861.7838
[2025-11-21 15:21:05] 2025-11-21 14:05:58,284 | INFO     | mean x: 1763705495.0042872
[2025-11-21 15:21:05] 2025-11-21 14:05:58,284 | INFO     | mean y: 2270320.5541264736
[2025-11-21 15:21:05] 2025-11-21 14:05:58,284 | INFO     | intersect: -5245928877.180539
[2025-11-21 15:21:05] 2025-11-21 14:05:58,285 | INFO     | chi2: 4.271803726219975
[2025-11-21 15:21:05] 2025-11-21 14:05:58,286 | INFO     | sum of square deviations: 247811729207.98273
[2025-11-21 15:21:05] 2025-11-21 14:05:58,307 | INFO     | sum of deviations: 946486543707.7339
[2025-11-21 15:21:05] 2025-11-21 14:05:58,307 | INFO     | mean x: 1763705342.5043104
[2025-11-21 15:21:05] 2025-11-21 14:05:58,307 | INFO     | mean y: 2277777.566810345
[2025-11-21 15:21:05] 2025-11-21 14:05:58,307 | INFO     | intersect: -6733978730.876116
[2025-11-21 15:21:05] 2025-11-21 14:05:58,309 | INFO     | chi2: 2.0733263158953577
[2025-11-21 15:21:05] 2025-11-21 14:05:58,309 | INFO     | current chi2=2.0733263158953577 (change=51.4648507100302 %)
[2025-11-21 15:21:05] 2025-11-21 14:05:58,310 | INFO     | sum of square deviations: 243827692937.9828
[2025-11-21 15:21:05] 2025-11-21 14:05:58,330 | INFO     | sum of deviations: 953226048567.66
[2025-11-21 15:21:05] 2025-11-21 14:05:58,331 | INFO     | mean x: 1763705190.0043337
[2025-11-21 15:21:05] 2025-11-21 14:05:58,331 | INFO     | mean y: 2278033.334777898
[2025-11-21 15:21:05] 2025-11-21 14:05:58,331 | INFO     | intersect: -6892794912.844958
[2025-11-21 15:21:05] 2025-11-21 14:05:58,332 | INFO     | chi2: 2.0335023977888693
[2025-11-21 15:21:05] 2025-11-21 14:05:58,332 | INFO     | current chi2=2.0335023977888693 (change=1.9207742554162552 %)
[2025-11-21 15:21:05] 2025-11-21 14:05:58,332 | INFO     | right removable region: 922
[2025-11-21 15:21:05] 2025-11-21 14:05:58,333 | INFO     | sum of square deviations: 247811726767.98273
[2025-11-21 15:21:05] 2025-11-21 14:05:58,355 | INFO     | sum of deviations: 574441030148.4303
[2025-11-21 15:21:05] 2025-11-21 14:05:58,355 | INFO     | mean x: 1763705647.5043104
[2025-11-21 15:21:05] 2025-11-21 14:05:58,355 | INFO     | mean y: 2276933.6422413792
[2025-11-21 15:21:05] 2025-11-21 14:05:58,355 | INFO     | intersect: -4086088464.7376003
[2025-11-21 15:21:05] 2025-11-21 14:05:58,356 | INFO     | chi2: 2.3476515982517374
[2025-11-21 15:21:05] 2025-11-21 14:05:58,357 | INFO     | current chi2=2.3476515982517374 (change=45.0430837015744 %)
[2025-11-21 15:21:05] 2025-11-21 14:05:58,358 | INFO     | sum of square deviations: 243827688057.9828
[2025-11-21 15:21:05] 2025-11-21 14:05:58,380 | INFO     | sum of deviations: 542773093070.7815
[2025-11-21 15:21:05] 2025-11-21 14:05:58,380 | INFO     | mean x: 1763705800.0043337
[2025-11-21 15:21:05] 2025-11-21 14:05:58,380 | INFO     | mean y: 2278145.5547128925
[2025-11-21 15:21:05] 2025-11-21 14:05:58,380 | INFO     | intersect: -3923822536.282467
[2025-11-21 15:21:05] 2025-11-21 14:05:58,381 | INFO     | chi2: 2.3234533437477616
[2025-11-21 15:21:05] 2025-11-21 14:05:58,381 | INFO     | current chi2=2.3234533437477616 (change=1.0307429995999378 %)
[2025-11-21 15:21:05] 2025-11-21 14:05:58,381 | INFO     | left removable region: 20
[2025-11-21 15:21:05] 2025-11-21 14:05:58,382 | INFO     | sum of square deviations: 227560828885.4818
[2025-11-21 15:21:05] 2025-11-21 14:05:58,403 | INFO     | sum of deviations: 701620709001.7449
[2025-11-21 15:21:05] 2025-11-21 14:05:58,403 | INFO     | mean x: 1763705769.5044346
[2025-11-21 15:21:05] 2025-11-21 14:05:58,403 | INFO     | mean y: 2287698.8137472286
[2025-11-21 15:21:05] 2025-11-21 14:05:58,403 | INFO     | intersect: -5435609932.913142
[2025-11-21 15:21:05] 2025-11-21 14:05:58,404 | INFO     | chi2: 0.06357635513287059
[2025-11-21 15:21:05] 2025-11-21 14:05:58,405 | INFO     | current memory leak: 3.08 B/s (using 902 data points, chi2=0.06)
[2025-11-21 15:21:05] 2025-11-21 14:05:58,406 | INFO     | could have reported an average CPU frequency of 2674 MHz (35 samples)
[2025-11-21 15:21:05] 2025-11-21 14:05:58,406 | INFO     | ..............................
[2025-11-21 15:21:05] 2025-11-21 14:05:58,406 | INFO     | . Timing measurements:
[2025-11-21 15:21:05] 2025-11-21 14:05:58,406 | INFO     | . get job = 0 s
[2025-11-21 15:21:05] 2025-11-21 14:05:58,406 | INFO     | . initial setup = 1 s
[2025-11-21 15:21:05] 2025-11-21 14:05:58,407 | INFO     | . payload setup = 9 s
[2025-11-21 15:21:05] 2025-11-21 14:05:58,407 | INFO     | . stage-in = 0 s
[2025-11-21 15:21:05] 2025-11-21 14:05:58,407 | INFO     | . payload execution = 56881 s
[2025-11-21 15:21:05] 2025-11-21 14:05:58,407 | INFO     | . stage-out = 2 s
[2025-11-21 15:21:05] 2025-11-21 14:05:58,407 | INFO     | . log creation = 0 s
[2025-11-21 15:21:05] 2025-11-21 14:05:58,407 | INFO     | ..............................
[2025-11-21 15:21:05] 2025-11-21 14:05:58,507 | INFO     | 
[2025-11-21 15:21:05] 2025-11-21 14:05:58,507 | INFO     | job summary report
[2025-11-21 15:21:05] 2025-11-21 14:05:58,507 | INFO     | --------------------------------------------------
[2025-11-21 15:21:05] 2025-11-21 14:05:58,507 | INFO     | PanDA job id: 6893847154
[2025-11-21 15:21:05] 2025-11-21 14:05:58,507 | INFO     | task id: 47523449
[2025-11-21 15:21:05] 2025-11-21 14:05:58,507 | INFO     | errors: (none)
[2025-11-21 15:21:05] 2025-11-21 14:05:58,507 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 15:21:05] 2025-11-21 14:05:58,507 | INFO     | pilot state: finished 
[2025-11-21 15:21:05] 2025-11-21 14:05:58,507 | INFO     | transexitcode: 0
[2025-11-21 15:21:05] 2025-11-21 14:05:58,508 | INFO     | exeerrorcode: 0
[2025-11-21 15:21:05] 2025-11-21 14:05:58,508 | INFO     | exeerrordiag: 
[2025-11-21 15:21:05] 2025-11-21 14:05:58,508 | INFO     | exitcode: 0
[2025-11-21 15:21:05] 2025-11-21 14:05:58,508 | INFO     | exitmsg: OK
[2025-11-21 15:21:05] 2025-11-21 14:05:58,508 | INFO     | cpuconsumptiontime: 225351 s
[2025-11-21 15:21:05] 2025-11-21 14:05:58,508 | INFO     | nevents: 1000
[2025-11-21 15:21:05] 2025-11-21 14:05:58,508 | INFO     | neventsw: 0
[2025-11-21 15:21:05] 2025-11-21 14:05:58,508 | INFO     | pid: 230544
[2025-11-21 15:21:05] 2025-11-21 14:05:58,508 | INFO     | pgrp: 230544
[2025-11-21 15:21:05] 2025-11-21 14:05:58,508 | INFO     | corecount: 4
[2025-11-21 15:21:05] 2025-11-21 14:05:58,508 | INFO     | event service: False
[2025-11-21 15:21:05] 2025-11-21 14:05:58,508 | INFO     | sizes: {0: 2298819, 7: 2299081, 11: 2299109, 56894: 2353200, 56898: 2362274, 56906: 2362464}
[2025-11-21 15:21:05] 2025-11-21 14:05:58,509 | INFO     | --------------------------------------------------
[2025-11-21 15:21:05] 2025-11-21 14:05:58,509 | INFO     | 
[2025-11-21 15:21:05] 2025-11-21 14:05:58,509 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2025-11-21 15:21:05] 2025-11-21 14:05:58,539 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 15:21:05] 2025-11-21 14:05:58,539 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 15:21:05] 2025-11-21 14:05:58,539 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 15:21:05] 2025-11-21 14:05:58,539 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 15:21:05] 2025-11-21 14:05:58,539 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 15:21:05] 2025-11-21 14:05:58,539 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 15:21:05] 2025-11-21 14:05:58,540 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 15:21:05] 2025-11-21 14:05:58,540 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 15:21:05] 2025-11-21 14:05:58,540 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 15:21:05] 2025-11-21 14:05:58,540 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 15:21:05] 2025-11-21 14:05:58,540 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 15:21:05] 2025-11-21 14:05:58,540 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 15:21:05] 2025-11-21 14:05:58,540 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 15:21:05] 2025-11-21 14:05:58,540 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 15:21:05] 2025-11-21 14:05:58,540 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 15:21:05] 2025-11-21 14:05:58,540 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 15:21:05] 2025-11-21 14:05:58,540 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 15:21:05] 2025-11-21 14:05:58,540 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 15:21:05] 2025-11-21 14:05:58,541 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 15:21:05] 2025-11-21 14:05:58,541 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 15:21:05] 2025-11-21 14:05:58,541 | INFO     | job 6893847154 has completed (purged errors)
[2025-11-21 15:21:05] 2025-11-21 14:05:58,541 | INFO     | overall cleanup function is called
[2025-11-21 15:21:05] 2025-11-21 14:05:59,556 | INFO     | --- collectZombieJob: --- 10, [230544]
[2025-11-21 15:21:05] 2025-11-21 14:05:59,557 | INFO     | zombie collector waiting for pid 230544
[2025-11-21 15:21:05] 2025-11-21 14:05:59,557 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 15:21:05] 2025-11-21 14:05:59,557 | INFO     | collected zombie processes
[2025-11-21 15:21:05] 2025-11-21 14:05:59,557 | INFO     | will attempt to kill all subprocesses of pid=230544
[2025-11-21 15:21:05] 2025-11-21 14:06:00,312 | INFO     | process IDs to be killed: [230544] (in reverse order)
[2025-11-21 15:21:05] 2025-11-21 14:06:00,589 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 15:21:05] 2025-11-21 14:06:00,589 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 15:21:05] 2025-11-21 14:06:00,625 | INFO     | did not find any defunct processes belonging to 230544
[2025-11-21 15:21:05] 2025-11-21 14:06:00,658 | INFO     | did not find any defunct processes belonging to 230544
[2025-11-21 15:21:05] 2025-11-21 14:06:00,659 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 15:21:05] 2025-11-21 14:06:00,659 | INFO     | ready for new job
[2025-11-21 15:21:05] 2025-11-21 14:06:00,659 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 15:21:05] 2025-11-21 14:06:00,665 | INFO     | ***************************************
[2025-11-21 15:21:05] 2025-11-21 14:06:00,665 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 15:21:05] 2025-11-21 14:06:00,665 | INFO     | ***************************************
[2025-11-21 15:21:05] 2025-11-21 14:06:00,666 | INFO     | 
[2025-11-21 15:21:05] 2025-11-21 14:06:00,674 | INFO     | architecture information:
[2025-11-21 15:21:05] 2025-11-21 14:06:00,675 | INFO     | executing command: cat /etc/os-release
[2025-11-21 15:21:05] 2025-11-21 14:06:00,699 | INFO     | cat /etc/os-release:
[2025-11-21 15:21:05] NAME="CentOS Linux"
[2025-11-21 15:21:05] VERSION="7 (Core)"
[2025-11-21 15:21:05] ID="centos"
[2025-11-21 15:21:05] ID_LIKE="rhel fedora"
[2025-11-21 15:21:05] VERSION_ID="7"
[2025-11-21 15:21:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 15:21:05] ANSI_COLOR="0;31"
[2025-11-21 15:21:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 15:21:05] HOME_URL="https://www.centos.org/"
[2025-11-21 15:21:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 15:21:05] 
[2025-11-21 15:21:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 15:21:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 15:21:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 15:21:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 15:21:05] 
[2025-11-21 15:21:05] 2025-11-21 14:06:00,699 | INFO     | ***************************************
[2025-11-21 15:21:05] 2025-11-21 14:06:01,202 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2025-11-21 15:21:05] 2025-11-21 14:06:01,225 | INFO     | sufficient remaining disk space (3298952216576 B)
[2025-11-21 15:21:05] 2025-11-21 14:06:01,226 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 15:21:05] 2025-11-21 14:06:01,226 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 15:21:05] 2025-11-21 14:06:01,226 | INFO     | update_server=False
[2025-11-21 15:21:05] 2025-11-21 14:06:01,226 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 15:21:05] 2025-11-21 14:06:01,226 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 15:21:05] 2025-11-21 14:06:01,227 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 15:21:05] 2025-11-21 14:06:01,227 | INFO     | aborting loop
[2025-11-21 15:21:05] 2025-11-21 14:06:01,261 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 15:21:05] 2025-11-21 14:06:01,517 | INFO     | all job control threads have been joined
[2025-11-21 15:21:05] 2025-11-21 14:06:01,605 | INFO     | all data control threads have been joined
[2025-11-21 15:21:05] 2025-11-21 14:06:01,795 | INFO     | all payload control threads have been joined
[2025-11-21 15:21:05] 2025-11-21 14:06:02,227 | INFO     | [job] retrieve thread has finished
[2025-11-21 15:21:05] 2025-11-21 14:06:02,232 | INFO     | [job] job monitor thread has finished
[2025-11-21 15:21:05] 2025-11-21 14:06:02,478 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 15:21:05] 2025-11-21 14:06:02,523 | INFO     | [job] control thread has finished
[2025-11-21 15:21:05] 2025-11-21 14:06:02,610 | INFO     | [data] control thread has finished
[2025-11-21 15:21:05] 2025-11-21 14:06:02,679 | INFO     | [payload] validate_post thread has finished
[2025-11-21 15:21:05] 2025-11-21 14:06:02,801 | INFO     | [payload] control thread has finished
[2025-11-21 15:21:05] 2025-11-21 14:06:03,181 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 15:21:05] 2025-11-21 14:06:03,233 | INFO     | [data] copytool_out thread has finished
[2025-11-21 15:21:05] 2025-11-21 14:06:03,416 | INFO     | [job] validate thread has finished
[2025-11-21 15:21:05] 2025-11-21 14:06:03,478 | INFO     | [payload] failed_post thread has finished
[2025-11-21 15:21:05] 2025-11-21 14:06:03,517 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 15:21:05] 2025-11-21 14:06:03,534 | INFO     | [data] copytool_in thread has finished
[2025-11-21 15:21:05] 2025-11-21 14:06:03,536 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 15:21:05] 2025-11-21 14:06:03,648 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 15:21:05] 2025-11-21 14:06:04,521 | INFO     | [job] queue monitor thread has finished
[2025-11-21 15:21:05] 2025-11-21 14:06:05,264 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 15:21:05] 2025-11-21 14:06:31,817 | INFO     | PID=223166 has CPU usage=13.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 15:21:05] 2025-11-21 14:06:31,817 | INFO     | .. there are 10 such processes running
[2025-11-21 15:21:05] 2025-11-21 14:06:31,818 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 15:21:05] 2025-11-21 14:06:31,818 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 15:21:05] 2025-11-21 14:06:31,818 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 15:21:05] 2025-11-21 14:06:49,219 | INFO     | [monitor] cgroup control has ended
[2025-11-21 15:21:05] 2025-11-21 14:06:50,683 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23045320087360)>', '<ExcThread(monitor, started 23045081102080)>']
[2025-11-21 15:21:05] 2025-11-21 14:06:50,910 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 15:21:05] 2025-11-21 14:06:50,910 | INFO     | [monitor] control thread has ended
[2025-11-21 15:21:05] 2025-11-21 14:06:55,708 | INFO     | all workflow threads have been joined
[2025-11-21 15:21:05] 2025-11-21 14:06:55,709 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 15:21:05] 2025-11-21 14:06:55,709 | INFO     | traces error code: 0
[2025-11-21 15:21:05] 2025-11-21 14:06:55,709 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 15:21:05] 2025-11-21 14:06:55,843 [wrapper] ==== pilot stdout END ====
[2025-11-21 15:21:05] 2025-11-21 14:06:55,847 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 15:21:05] 2025-11-21 14:06:55,851 [wrapper] pilotpid: 223166
[2025-11-21 15:21:05] 2025-11-21 14:06:55,855 [wrapper] Pilot exit status: 0
[2025-11-21 15:21:05] 2025-11-21 14:06:55,869 [wrapper] pandaids: 6893847154
[2025-11-21 15:21:05] 2025-11-21 14:06:56,037 [wrapper] cleanup supervisor_pilot 1696682 223167
[2025-11-21 15:21:05] 2025-11-21 14:06:56,043 [wrapper] Test setup, not cleaning
[2025-11-21 15:21:05] 2025-11-21 14:06:56,047 [wrapper] apfmon messages muted
[2025-11-21 15:21:05] 2025-11-21 14:06:56,050 [wrapper] ==== wrapper stdout END ====
[2025-11-21 15:21:05] 2025-11-21 14:06:56,054 [wrapper] ==== wrapper stderr END ====
[2025-11-21 15:21:05]  *** Error codes and diagnostics ***
[2025-11-21 15:21:05]     "exeErrorCode": 0,
[2025-11-21 15:21:05]     "exeErrorDiag": "",
[2025-11-21 15:21:05]     "pilotErrorCode": 0,
[2025-11-21 15:21:05]     "pilotErrorDiag": "",
[2025-11-21 15:21:05]  *** Listing of results directory ***
[2025-11-21 15:21:05] total 1346604
[2025-11-21 15:21:05] -rw-r--r-- 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-21 15:21:05] -rwx------ 1 boinc boinc     36292 Nov 20 11:23 runpilot2-wrapper.sh
[2025-11-21 15:21:05] -rw-r--r-- 1 boinc boinc      5112 Nov 20 11:25 queuedata.json
[2025-11-21 15:21:05] -rw-r--r-- 1 boinc boinc       100 Nov 20 21:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 15:21:05] -rwxr-xr-x 1 boinc boinc      7986 Nov 20 21:04 run_atlas
[2025-11-21 15:21:05] -rw-r--r-- 1 boinc boinc       105 Nov 20 21:04 job.xml
[2025-11-21 15:21:05] -rw------- 2 boinc boinc  28246016 Nov 20 21:12 copy_NniY5c
[2025-11-21 15:21:05] -rw-r--r-- 2 boinc boinc 411667974 Nov 20 23:16 EVNT.47493127._000233.pool.root.1
[2025-11-21 15:21:05] -rw-r--r-- 2 boinc boinc    590101 Nov 20 23:16 input.tar.gz
[2025-11-21 15:21:05] -rw-r--r-- 2 boinc boinc     15847 Nov 20 23:16 start_atlas.sh
[2025-11-21 15:21:05] drwxrwx--x 2 boinc boinc      4096 Nov 20 23:16 shared
[2025-11-21 15:21:05] -rw-r--r-- 1 boinc boinc         0 Nov 20 23:16 boinc_lockfile
[2025-11-21 15:21:05] -rw-r--r-- 1 boinc boinc      2786 Nov 20 23:16 pandaJob.out
[2025-11-21 15:21:05] -rw------- 1 boinc boinc    989440 Nov 20 23:17 agis_schedconf.cvmfs.json
[2025-11-21 15:21:05] drwx------ 5 boinc boinc      4096 Nov 20 23:17 pilot3
[2025-11-21 15:21:05] -rw-r--r-- 1 boinc boinc      6693 Nov 21 01:58 init_data.xml
[2025-11-21 15:21:05] -rw-r--r-- 1 boinc boinc       531 Nov 21 14:58 boinc_task_state.xml
[2025-11-21 15:21:05] -rw------- 1 boinc boinc 916052843 Nov 21 15:05 HITS.47523449._002325.pool.root.1
[2025-11-21 15:21:05] -rw------- 1 boinc boinc        95 Nov 21 15:05 pilot_heartbeat.json
[2025-11-21 15:21:05] -rw------- 1 boinc boinc      1040 Nov 21 15:05 memory_monitor_summary.json
[2025-11-21 15:21:05] -rw------- 1 boinc boinc   1526164 Nov 21 15:05 agis_ddmendpoints.agis.ALL.json
[2025-11-21 15:21:05] -rw------- 1 boinc boinc   1673945 Nov 21 15:05 log.47523449._002325.job.log.tgz.1
[2025-11-21 15:21:05] -rw------- 1 boinc boinc      8594 Nov 21 15:05 heartbeat.json
[2025-11-21 15:21:05] -rw------- 1 boinc boinc      4836 Nov 21 15:06 pilotlog.txt
[2025-11-21 15:21:05] -rw------- 1 boinc boinc   7843324 Nov 21 15:06 log.47523449._002325.job.log.1
[2025-11-21 15:21:05] -rw------- 1 boinc boinc       353 Nov 21 15:06 output.list
[2025-11-21 15:21:05] -rw-r--r-- 1 boinc boinc       620 Nov 21 15:06 runtime_log
[2025-11-21 15:21:05] -rw------- 1 boinc boinc   9533440 Nov 21 15:06 result.tar.gz
[2025-11-21 15:21:05] -rw-r--r-- 1 boinc boinc      9223 Nov 21 15:06 runtime_log.err
[2025-11-21 15:21:05] -rw------- 1 boinc boinc       670 Nov 21 15:06 W4eMDmqzGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmRHKDm8e6atm.diag
[2025-11-21 15:21:05] -rw-r--r-- 1 boinc boinc        28 Nov 21 15:21 wrapper_checkpoint.txt
[2025-11-21 15:21:05] -rw-r--r-- 1 boinc boinc      8192 Nov 21 15:21 boinc_mmap_file
[2025-11-21 15:21:05] -rw-r--r-- 1 boinc boinc     21090 Nov 21 15:21 stderr.txt
[2025-11-21 15:21:05] HITS file was successfully produced:
[2025-11-21 15:21:05] -rw------- 1 boinc boinc 916052843 Nov 21 15:05 shared/HITS.pool.root.1
[2025-11-21 15:21:05]  *** Contents of shared directory: ***
[2025-11-21 15:21:05] total 1334108
[2025-11-21 15:21:05] -rw------- 2 boinc boinc  28246016 Nov 20 21:12 copy_NniY5c
[2025-11-21 15:21:05] -rw-r--r-- 2 boinc boinc 411667974 Nov 20 23:16 ATLAS.root_0
[2025-11-21 15:21:05] -rw-r--r-- 2 boinc boinc    590101 Nov 20 23:16 input.tar.gz
[2025-11-21 15:21:05] -rw-r--r-- 2 boinc boinc     15847 Nov 20 23:16 start_atlas.sh
[2025-11-21 15:21:05] -rw------- 1 boinc boinc 916052843 Nov 21 15:05 HITS.pool.root.1
[2025-11-21 15:21:05] -rw------- 1 boinc boinc   9533440 Nov 21 15:06 result.tar.gz
15:21:06 (218858): run_atlas exited; CPU time 228264.953076
15:21:06 (218858): called boinc_finish(0)

</stderr_txt>
]]>

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