Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:49:15 (3263657): wrapper (7.7.26015): starting
13:49:15 (3263657): wrapper: running run_atlas (--nthreads 4)
[2025-11-25 13:49:15] Arguments: --nthreads 4
[2025-11-25 13:49:15] Threads: 4
[2025-11-25 13:49:15] Checking for CVMFS
[2025-11-25 13:49:15] No cvmfs_config command found, will try listing directly
[2025-11-25 13:49:15] CVMFS is ok
[2025-11-25 13:49:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 13:49:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 13:49:15] Further information can be found at the LHC@home message board.
[2025-11-25 13:49:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 13:49:15] Checking for apptainer binary...
[2025-11-25 13:49:15] which: no apptainer in ((null))
[2025-11-25 13:49:15] apptainer is not installed, using version from CVMFS
[2025-11-25 13:49:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 13:49:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-11-25 13:49:15] apptainer works
[2025-11-25 13:49:15] Set ATHENA_PROC_NUMBER=4
[2025-11-25 13:49:15] Set ATHENA_CORE_NUMBER=4
[2025-11-25 13:49:16] Starting ATLAS job with PandaID=6893854870
[2025-11-25 13:49:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 06:20:04]  *** The last 200 lines of the pilot log: ***
[2025-11-26 06:20:04] 2025-11-26 05:16:07,785 | INFO     | monitor loop #4226: job 0:6893854870 is in state 'finished'
[2025-11-26 06:20:04] 2025-11-26 05:16:07,785 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 06:20:04] 2025-11-26 05:16:07,941 | INFO     | time since job start (59201s) is within the limit (172800.0s)
[2025-11-26 06:20:04] 2025-11-26 05:16:09,472 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 06:20:04] 2025-11-26 05:16:09,483 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2693.393968749999
[2025-11-26 06:20:04] 2025-11-26 05:16:09,497 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6893854870/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 06:20:04] 2025-11-26 05:16:09,498 | INFO     | extracted standard info from prmon json
[2025-11-26 06:20:04] 2025-11-26 05:16:09,499 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 06:20:04] 2025-11-26 05:16:09,499 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 06:20:04] 2025-11-26 05:16:09,515 | INFO     | fitting pss+swap vs Time
[2025-11-26 06:20:04] 2025-11-26 05:16:09,517 | INFO     | sum of square deviations: 283005307580.20197
[2025-11-26 06:20:04] 2025-11-26 05:16:09,535 | INFO     | sum of deviations: 842211590461.8145
[2025-11-26 06:20:04] 2025-11-26 05:16:09,536 | INFO     | mean x: 1764104548.5175257
[2025-11-26 06:20:04] 2025-11-26 05:16:09,536 | INFO     | mean y: 2306711.9226804124
[2025-11-26 06:20:04] 2025-11-26 05:16:09,536 | INFO     | intersect: -5247592345.630556
[2025-11-26 06:20:04] 2025-11-26 05:16:09,537 | INFO     | chi2: 3.995868226526804
[2025-11-26 06:20:04] 2025-11-26 05:16:09,538 | INFO     | sum of square deviations: 278651472992.7003
[2025-11-26 06:20:04] 2025-11-26 05:16:09,556 | INFO     | sum of deviations: 1052628196033.1519
[2025-11-26 06:20:04] 2025-11-26 05:16:09,557 | INFO     | mean x: 1764104396.0176165
[2025-11-26 06:20:04] 2025-11-26 05:16:09,557 | INFO     | mean y: 2314079.10880829
[2025-11-26 06:20:04] 2025-11-26 05:16:09,557 | INFO     | intersect: -6661731181.62743
[2025-11-26 06:20:04] 2025-11-26 05:16:09,558 | INFO     | chi2: 1.7789525302527067
[2025-11-26 06:20:04] 2025-11-26 05:16:09,558 | INFO     | current chi2=1.7789525302527067 (change=55.480200311836434 %)
[2025-11-26 06:20:04] 2025-11-26 05:16:09,560 | INFO     | sum of square deviations: 274342522967.69913
[2025-11-26 06:20:04] 2025-11-26 05:16:09,578 | INFO     | sum of deviations: 1058018592881.2063
[2025-11-26 06:20:04] 2025-11-26 05:16:09,578 | INFO     | mean x: 1764104243.5177083
[2025-11-26 06:20:04] 2025-11-26 05:16:09,578 | INFO     | mean y: 2314267.69375
[2025-11-26 06:20:04] 2025-11-26 05:16:09,578 | INFO     | intersect: -6801060831.5508
[2025-11-26 06:20:04] 2025-11-26 05:16:09,579 | INFO     | chi2: 1.7396051481280783
[2025-11-26 06:20:04] 2025-11-26 05:16:09,580 | INFO     | current chi2=1.7396051481280783 (change=2.2118286719566917 %)
[2025-11-26 06:20:04] 2025-11-26 05:16:09,580 | INFO     | right removable region: 959
[2025-11-26 06:20:04] 2025-11-26 05:16:09,581 | INFO     | sum of square deviations: 278651462622.70044
[2025-11-26 06:20:04] 2025-11-26 05:16:09,599 | INFO     | sum of deviations: 674724421073.3871
[2025-11-26 06:20:04] 2025-11-26 05:16:09,599 | INFO     | mean x: 1764104701.0176165
[2025-11-26 06:20:04] 2025-11-26 05:16:09,599 | INFO     | mean y: 2312567.741968912
[2025-11-26 06:20:04] 2025-11-26 05:16:09,599 | INFO     | intersect: -4269276434.174093
[2025-11-26 06:20:04] 2025-11-26 05:16:09,600 | INFO     | chi2: 2.3615438338015395
[2025-11-26 06:20:04] 2025-11-26 05:16:09,601 | INFO     | current chi2=2.3615438338015395 (change=40.90035757124589 %)
[2025-11-26 06:20:04] 2025-11-26 05:16:09,602 | INFO     | sum of square deviations: 274342502227.69907
[2025-11-26 06:20:04] 2025-11-26 05:16:09,619 | INFO     | sum of deviations: 660755994313.3656
[2025-11-26 06:20:04] 2025-11-26 05:16:09,620 | INFO     | mean x: 1764104853.5177083
[2025-11-26 06:20:04] 2025-11-26 05:16:09,620 | INFO     | mean y: 2313061.566666667
[2025-11-26 06:20:04] 2025-11-26 05:16:09,620 | INFO     | intersect: -4246546838.353857
[2025-11-26 06:20:04] 2025-11-26 05:16:09,621 | INFO     | chi2: 2.3601683278194012
[2025-11-26 06:20:04] 2025-11-26 05:16:09,621 | INFO     | current chi2=2.3601683278194012 (change=0.05824604915014716 %)
[2025-11-26 06:20:04] 2025-11-26 05:16:09,621 | INFO     | left removable region: 20
[2025-11-26 06:20:04] 2025-11-26 05:16:09,623 | INFO     | sum of square deviations: 256729724993.72797
[2025-11-26 06:20:04] 2025-11-26 05:16:09,639 | INFO     | sum of deviations: 869896787786.6844
[2025-11-26 06:20:04] 2025-11-26 05:16:09,640 | INFO     | mean x: 1764104823.0170393
[2025-11-26 06:20:04] 2025-11-26 05:16:09,640 | INFO     | mean y: 2320830.5197018106
[2025-11-26 06:20:04] 2025-11-26 05:16:09,640 | INFO     | intersect: -5975129263.734131
[2025-11-26 06:20:04] 2025-11-26 05:16:09,641 | INFO     | chi2: 0.07927140514560466
[2025-11-26 06:20:04] 2025-11-26 05:16:09,641 | INFO     | current memory leak: 3.39 B/s (using 939 data points, chi2=0.08)
[2025-11-26 06:20:04] 2025-11-26 05:16:09,642 | INFO     | could have reported an average CPU frequency of 2680 MHz (36 samples)
[2025-11-26 06:20:04] 2025-11-26 05:16:09,643 | INFO     | ..............................
[2025-11-26 06:20:04] 2025-11-26 05:16:09,643 | INFO     | . Timing measurements:
[2025-11-26 06:20:04] 2025-11-26 05:16:09,643 | INFO     | . get job = 0 s
[2025-11-26 06:20:04] 2025-11-26 05:16:09,643 | INFO     | . initial setup = 1 s
[2025-11-26 06:20:04] 2025-11-26 05:16:09,643 | INFO     | . payload setup = 6 s
[2025-11-26 06:20:04] 2025-11-26 05:16:09,643 | INFO     | . stage-in = 0 s
[2025-11-26 06:20:04] 2025-11-26 05:16:09,643 | INFO     | . payload execution = 59169 s
[2025-11-26 06:20:04] 2025-11-26 05:16:09,643 | INFO     | . stage-out = 2 s
[2025-11-26 06:20:04] 2025-11-26 05:16:09,643 | INFO     | . log creation = 0 s
[2025-11-26 06:20:04] 2025-11-26 05:16:09,643 | INFO     | ..............................
[2025-11-26 06:20:04] 2025-11-26 05:16:09,736 | INFO     | 
[2025-11-26 06:20:04] 2025-11-26 05:16:09,738 | INFO     | job summary report
[2025-11-26 06:20:04] 2025-11-26 05:16:09,738 | INFO     | --------------------------------------------------
[2025-11-26 06:20:04] 2025-11-26 05:16:09,738 | INFO     | PanDA job id: 6893854870
[2025-11-26 06:20:04] 2025-11-26 05:16:09,738 | INFO     | task id: 47523449
[2025-11-26 06:20:04] 2025-11-26 05:16:09,738 | INFO     | errors: (none)
[2025-11-26 06:20:04] 2025-11-26 05:16:09,738 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 06:20:04] 2025-11-26 05:16:09,738 | INFO     | pilot state: finished 
[2025-11-26 06:20:04] 2025-11-26 05:16:09,738 | INFO     | transexitcode: 0
[2025-11-26 06:20:04] 2025-11-26 05:16:09,738 | INFO     | exeerrorcode: 0
[2025-11-26 06:20:04] 2025-11-26 05:16:09,738 | INFO     | exeerrordiag: 
[2025-11-26 06:20:04] 2025-11-26 05:16:09,739 | INFO     | exitcode: 0
[2025-11-26 06:20:04] 2025-11-26 05:16:09,739 | INFO     | exitmsg: OK
[2025-11-26 06:20:04] 2025-11-26 05:16:09,739 | INFO     | cpuconsumptiontime: 233857 s
[2025-11-26 06:20:04] 2025-11-26 05:16:09,739 | INFO     | nevents: 1000
[2025-11-26 06:20:04] 2025-11-26 05:16:09,739 | INFO     | neventsw: 0
[2025-11-26 06:20:04] 2025-11-26 05:16:09,739 | INFO     | pid: 3274409
[2025-11-26 06:20:04] 2025-11-26 05:16:09,739 | INFO     | pgrp: 3274409
[2025-11-26 06:20:04] 2025-11-26 05:16:09,739 | INFO     | corecount: 4
[2025-11-26 06:20:04] 2025-11-26 05:16:09,739 | INFO     | event service: False
[2025-11-26 06:20:04] 2025-11-26 05:16:09,739 | INFO     | sizes: {0: 2284326, 1: 2284326, 5: 2284616, 11: 2284672, 59179: 2336545, 59182: 2345561, 59183: 2345745, 59188: 2346019}
[2025-11-26 06:20:04] 2025-11-26 05:16:09,740 | INFO     | --------------------------------------------------
[2025-11-26 06:20:04] 2025-11-26 05:16:09,740 | INFO     | 
[2025-11-26 06:20:04] 2025-11-26 05:16:09,740 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-11-26 06:20:04] 2025-11-26 05:16:09,762 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 06:20:04] 2025-11-26 05:16:09,762 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 06:20:04] 2025-11-26 05:16:09,762 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 06:20:04] 2025-11-26 05:16:09,763 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 06:20:04] 2025-11-26 05:16:09,763 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 06:20:04] 2025-11-26 05:16:09,763 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 06:20:04] 2025-11-26 05:16:09,763 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 06:20:04] 2025-11-26 05:16:09,763 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 06:20:04] 2025-11-26 05:16:09,763 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 06:20:04] 2025-11-26 05:16:09,763 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 06:20:04] 2025-11-26 05:16:09,763 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 06:20:04] 2025-11-26 05:16:09,763 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 06:20:04] 2025-11-26 05:16:09,763 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 06:20:04] 2025-11-26 05:16:09,763 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 06:20:04] 2025-11-26 05:16:09,764 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 06:20:04] 2025-11-26 05:16:09,764 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 06:20:04] 2025-11-26 05:16:09,764 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 06:20:04] 2025-11-26 05:16:09,764 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 06:20:04] 2025-11-26 05:16:09,764 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 06:20:04] 2025-11-26 05:16:09,764 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 06:20:04] 2025-11-26 05:16:09,764 | INFO     | job 6893854870 has completed (purged errors)
[2025-11-26 06:20:04] 2025-11-26 05:16:09,764 | INFO     | overall cleanup function is called
[2025-11-26 06:20:04] 2025-11-26 05:16:10,776 | INFO     | --- collectZombieJob: --- 10, [3274409]
[2025-11-26 06:20:04] 2025-11-26 05:16:10,777 | INFO     | zombie collector waiting for pid 3274409
[2025-11-26 06:20:04] 2025-11-26 05:16:10,777 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 06:20:04] 2025-11-26 05:16:10,777 | INFO     | collected zombie processes
[2025-11-26 06:20:04] 2025-11-26 05:16:10,777 | INFO     | will attempt to kill all subprocesses of pid=3274409
[2025-11-26 06:20:04] 2025-11-26 05:16:11,176 | INFO     | process IDs to be killed: [3274409] (in reverse order)
[2025-11-26 06:20:04] 2025-11-26 05:16:11,288 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 06:20:04] 2025-11-26 05:16:11,289 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 06:20:04] 2025-11-26 05:16:11,302 | INFO     | did not find any defunct processes belonging to 3274409
[2025-11-26 06:20:04] 2025-11-26 05:16:11,316 | INFO     | did not find any defunct processes belonging to 3274409
[2025-11-26 06:20:04] 2025-11-26 05:16:11,317 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 06:20:04] 2025-11-26 05:16:11,317 | INFO     | ready for new job
[2025-11-26 06:20:04] 2025-11-26 05:16:11,317 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 06:20:04] 2025-11-26 05:16:11,322 | INFO     | ***************************************
[2025-11-26 06:20:04] 2025-11-26 05:16:11,323 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 06:20:04] 2025-11-26 05:16:11,323 | INFO     | ***************************************
[2025-11-26 06:20:04] 2025-11-26 05:16:11,323 | INFO     | 
[2025-11-26 06:20:04] 2025-11-26 05:16:11,327 | INFO     | architecture information:
[2025-11-26 06:20:04] 2025-11-26 05:16:11,327 | INFO     | executing command: cat /etc/os-release
[2025-11-26 06:20:04] 2025-11-26 05:16:11,344 | INFO     | cat /etc/os-release:
[2025-11-26 06:20:04] NAME="CentOS Linux"
[2025-11-26 06:20:04] VERSION="7 (Core)"
[2025-11-26 06:20:04] ID="centos"
[2025-11-26 06:20:04] ID_LIKE="rhel fedora"
[2025-11-26 06:20:04] VERSION_ID="7"
[2025-11-26 06:20:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 06:20:04] ANSI_COLOR="0;31"
[2025-11-26 06:20:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 06:20:04] HOME_URL="https://www.centos.org/"
[2025-11-26 06:20:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 06:20:04] 
[2025-11-26 06:20:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 06:20:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 06:20:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 06:20:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 06:20:04] 
[2025-11-26 06:20:04] 2025-11-26 05:16:11,344 | INFO     | ***************************************
[2025-11-26 06:20:04] 2025-11-26 05:16:11,847 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-11-26 06:20:04] 2025-11-26 05:16:11,861 | INFO     | sufficient remaining disk space (670354636800 B)
[2025-11-26 06:20:04] 2025-11-26 05:16:11,861 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 06:20:04] 2025-11-26 05:16:11,862 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 06:20:04] 2025-11-26 05:16:11,862 | INFO     | update_server=False
[2025-11-26 06:20:04] 2025-11-26 05:16:11,862 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 06:20:04] 2025-11-26 05:16:11,862 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:20:04] 2025-11-26 05:16:11,862 | INFO     | aborting loop
[2025-11-26 06:20:04] 2025-11-26 05:16:12,187 | INFO     | all payload control threads have been joined
[2025-11-26 06:20:04] 2025-11-26 05:16:12,297 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 06:20:04] 2025-11-26 05:16:12,586 | INFO     | all data control threads have been joined
[2025-11-26 06:20:04] 2025-11-26 05:16:12,867 | INFO     | [job] retrieve thread has finished
[2025-11-26 06:20:04] 2025-11-26 05:16:12,867 | INFO     | [job] job monitor thread has finished
[2025-11-26 06:20:04] 2025-11-26 05:16:13,192 | INFO     | [payload] control thread has finished
[2025-11-26 06:20:04] 2025-11-26 05:16:13,202 | INFO     | [data] copytool_in thread has finished
[2025-11-26 06:20:04] 2025-11-26 05:16:13,267 | INFO     | [payload] validate_post thread has finished
[2025-11-26 06:20:04] 2025-11-26 05:16:13,395 | INFO     | all job control threads have been joined
[2025-11-26 06:20:04] 2025-11-26 05:16:13,592 | INFO     | [data] control thread has finished
[2025-11-26 06:20:04] 2025-11-26 05:16:13,717 | INFO     | [job] validate thread has finished
[2025-11-26 06:20:04] 2025-11-26 05:16:13,747 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 06:20:04] 2025-11-26 05:16:13,891 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 06:20:04] 2025-11-26 05:16:14,119 | INFO     | [payload] failed_post thread has finished
[2025-11-26 06:20:04] 2025-11-26 05:16:14,302 | INFO     | [data] copytool_out thread has finished
[2025-11-26 06:20:04] 2025-11-26 05:16:14,331 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 06:20:04] 2025-11-26 05:16:14,359 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 06:20:04] 2025-11-26 05:16:14,401 | INFO     | [job] control thread has finished
[2025-11-26 06:20:04] 2025-11-26 05:16:14,747 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:20:04] 2025-11-26 05:16:15,340 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 06:20:04] 2025-11-26 05:16:15,752 | INFO     | [job] queue monitor thread has finished
[2025-11-26 06:20:04] 2025-11-26 05:16:19,346 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 06:20:04] 2025-11-26 05:16:41,545 | INFO     | PID=3267509 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 06:20:04] 2025-11-26 05:16:41,545 | INFO     | .. there are 3 such processes running
[2025-11-26 06:20:04] 2025-11-26 05:16:41,545 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 06:20:04] 2025-11-26 05:16:41,545 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 06:20:04] 2025-11-26 05:16:41,546 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 06:20:04] 2025-11-26 05:17:01,691 | INFO     | [monitor] cgroup control has ended
[2025-11-26 06:20:04] 2025-11-26 05:17:03,501 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23009135966016)>', '<ExcThread(monitor, started 23008898942720)>']
[2025-11-26 06:20:04] 2025-11-26 05:17:03,657 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 06:20:04] 2025-11-26 05:17:03,657 | INFO     | [monitor] control thread has ended
[2025-11-26 06:20:04] 2025-11-26 05:17:08,506 | INFO     | all workflow threads have been joined
[2025-11-26 06:20:04] 2025-11-26 05:17:08,506 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 06:20:04] 2025-11-26 05:17:08,507 | INFO     | traces error code: 0
[2025-11-26 06:20:04] 2025-11-26 05:17:08,507 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 06:20:04] 2025-11-26 05:17:08,683 [wrapper] ==== pilot stdout END ====
[2025-11-26 06:20:04] 2025-11-26 05:17:08,686 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 06:20:04] 2025-11-26 05:17:08,689 [wrapper] pilotpid: 3267509
[2025-11-26 06:20:04] 2025-11-26 05:17:08,691 [wrapper] Pilot exit status: 0
[2025-11-26 06:20:04] 2025-11-26 05:17:08,702 [wrapper] pandaids: 6893854870
[2025-11-26 06:20:04] 2025-11-26 05:17:08,781 [wrapper] cleanup supervisor_pilot 3925091 3267510
[2025-11-26 06:20:04] 2025-11-26 05:17:08,784 [wrapper] Test setup, not cleaning
[2025-11-26 06:20:04] 2025-11-26 05:17:08,787 [wrapper] apfmon messages muted
[2025-11-26 06:20:04] 2025-11-26 05:17:08,790 [wrapper] ==== wrapper stdout END ====
[2025-11-26 06:20:04] 2025-11-26 05:17:08,792 [wrapper] ==== wrapper stderr END ====
[2025-11-26 06:20:04]  *** Error codes and diagnostics ***
[2025-11-26 06:20:04]     "exeErrorCode": 0,
[2025-11-26 06:20:04]     "exeErrorDiag": "",
[2025-11-26 06:20:04]     "pilotErrorCode": 0,
[2025-11-26 06:20:04]     "pilotErrorDiag": "",
[2025-11-26 06:20:04]  *** Listing of results directory ***
[2025-11-26 06:20:04] total 1318420
[2025-11-26 06:20:04] -rw-r--r-- 1 boinc boinc    576529 Nov 20 13:07 pilot3.tar.gz
[2025-11-26 06:20:04] -rw-r--r-- 1 boinc boinc      5112 Nov 20 13:26 queuedata.json
[2025-11-26 06:20:04] -rwx------ 1 boinc boinc     36292 Nov 20 13:26 runpilot2-wrapper.sh
[2025-11-26 06:20:04] -rw-r--r-- 1 boinc boinc       100 Nov 25 13:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 06:20:04] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 13:49 run_atlas
[2025-11-26 06:20:04] -rw-r--r-- 1 boinc boinc       105 Nov 25 13:49 job.xml
[2025-11-26 06:20:04] -rw-r--r-- 2 boinc boinc 408810051 Nov 25 13:49 EVNT.47493127._000427.pool.root.1
[2025-11-26 06:20:04] -rw-r--r-- 1 boinc boinc      6635 Nov 25 13:49 init_data.xml
[2025-11-26 06:20:04] -rw-r--r-- 2 boinc boinc     15847 Nov 25 13:49 start_atlas.sh
[2025-11-26 06:20:04] drwxrwx--x 2 boinc boinc      4096 Nov 25 13:49 shared
[2025-11-26 06:20:04] -rw-r--r-- 2 boinc boinc    590100 Nov 25 13:49 input.tar.gz
[2025-11-26 06:20:04] -rw-r--r-- 1 boinc boinc         0 Nov 25 13:49 boinc_lockfile
[2025-11-26 06:20:04] -rw-r--r-- 1 boinc boinc      2786 Nov 25 13:49 pandaJob.out
[2025-11-26 06:20:04] -rw------- 1 boinc boinc    991909 Nov 25 13:49 agis_schedconf.cvmfs.json
[2025-11-26 06:20:04] drwx------ 5 boinc boinc      4096 Nov 25 13:49 pilot3
[2025-11-26 06:20:04] -rw-r--r-- 1 boinc boinc       532 Nov 26 06:08 boinc_task_state.xml
[2025-11-26 06:20:04] -rw------- 1 boinc boinc 917364694 Nov 26 06:15 HITS.47523449._004267.pool.root.1
[2025-11-26 06:20:04] -rw------- 1 boinc boinc        95 Nov 26 06:15 pilot_heartbeat.json
[2025-11-26 06:20:04] -rw------- 1 boinc boinc      1046 Nov 26 06:15 memory_monitor_summary.json
[2025-11-26 06:20:04] -rw------- 1 boinc boinc   1516240 Nov 26 06:16 agis_ddmendpoints.agis.ALL.json
[2025-11-26 06:20:04] -rw------- 1 boinc boinc   1713558 Nov 26 06:16 log.47523449._004267.job.log.tgz.1
[2025-11-26 06:20:04] -rw------- 1 boinc boinc      8630 Nov 26 06:16 heartbeat.json
[2025-11-26 06:20:04] -rw------- 1 boinc boinc      4833 Nov 26 06:17 pilotlog.txt
[2025-11-26 06:20:04] -rw------- 1 boinc boinc   8267957 Nov 26 06:17 log.47523449._004267.job.log.1
[2025-11-26 06:20:04] -rw------- 1 boinc boinc       353 Nov 26 06:17 output.list
[2025-11-26 06:20:04] -rw-r--r-- 1 boinc boinc       620 Nov 26 06:17 runtime_log
[2025-11-26 06:20:04] -rw------- 1 boinc boinc  10004480 Nov 26 06:17 result.tar.gz
[2025-11-26 06:20:04] -rw------- 1 boinc boinc       670 Nov 26 06:17 DlwKDmXvIg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmUcGKDmgyEElm.diag
[2025-11-26 06:20:04] -rw-r--r-- 1 boinc boinc      9206 Nov 26 06:17 runtime_log.err
[2025-11-26 06:20:04] -rw-r--r-- 1 boinc boinc        28 Nov 26 06:19 wrapper_checkpoint.txt
[2025-11-26 06:20:04] -rw-r--r-- 1 boinc boinc      8192 Nov 26 06:20 boinc_mmap_file
[2025-11-26 06:20:04] -rw-r--r-- 1 boinc boinc     21121 Nov 26 06:20 stderr.txt
[2025-11-26 06:20:04] HITS file was successfully produced:
[2025-11-26 06:20:04] -rw------- 1 boinc boinc 917364694 Nov 26 06:15 shared/HITS.pool.root.1
[2025-11-26 06:20:04]  *** Contents of shared directory: ***
[2025-11-26 06:20:04] total 1305472
[2025-11-26 06:20:04] -rw-r--r-- 2 boinc boinc 408810051 Nov 25 13:49 ATLAS.root_0
[2025-11-26 06:20:04] -rw-r--r-- 2 boinc boinc     15847 Nov 25 13:49 start_atlas.sh
[2025-11-26 06:20:04] -rw-r--r-- 2 boinc boinc    590100 Nov 25 13:49 input.tar.gz
[2025-11-26 06:20:04] -rw------- 1 boinc boinc 917364694 Nov 26 06:15 HITS.pool.root.1
[2025-11-26 06:20:04] -rw------- 1 boinc boinc  10004480 Nov 26 06:17 result.tar.gz
06:20:05 (3263657): run_atlas exited; CPU time 236308.762397
06:20:05 (3263657): called boinc_finish(0)

</stderr_txt>
]]>

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