Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:20:16 (3936109): wrapper (7.7.26015): starting
06:20:16 (3936109): wrapper: running run_atlas (--nthreads 4)
[2025-11-26 06:20:16] Arguments: --nthreads 4
[2025-11-26 06:20:16] Threads: 4
[2025-11-26 06:20:16] Checking for CVMFS
[2025-11-26 06:20:16] No cvmfs_config command found, will try listing directly
[2025-11-26 06:20:16] CVMFS is ok
[2025-11-26 06:20:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 06:20:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 06:20:16] Further information can be found at the LHC@home message board.
[2025-11-26 06:20:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 06:20:16] Checking for apptainer binary...
[2025-11-26 06:20:16] which: no apptainer in ((null))
[2025-11-26 06:20:16] apptainer is not installed, using version from CVMFS
[2025-11-26 06:20:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 06:20:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-11-26 06:20:16] apptainer works
[2025-11-26 06:20:16] Set ATHENA_PROC_NUMBER=4
[2025-11-26 06:20:16] Set ATHENA_CORE_NUMBER=4
[2025-11-26 06:20:16] Starting ATLAS job with PandaID=6893853426
[2025-11-26 06:20:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 23:30:08]  *** The last 200 lines of the pilot log: ***
[2025-11-26 23:30:08] 2025-11-26 22:24:45,965 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6893853426/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 23:30:08] 2025-11-26 22:24:45,966 | INFO     | extracted standard info from prmon json
[2025-11-26 23:30:08] 2025-11-26 22:24:45,966 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 23:30:08] 2025-11-26 22:24:45,966 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 23:30:08] 2025-11-26 22:24:45,985 | INFO     | fitting pss+swap vs Time
[2025-11-26 23:30:08] 2025-11-26 22:24:45,986 | INFO     | sum of square deviations: 316640451640.97473
[2025-11-26 23:30:08] 2025-11-26 22:24:46,008 | INFO     | sum of deviations: 835274252110.3749
[2025-11-26 23:30:08] 2025-11-26 22:24:46,008 | INFO     | mean x: 1764165139.0049653
[2025-11-26 23:30:08] 2025-11-26 22:24:46,008 | INFO     | mean y: 2292697.125124131
[2025-11-26 23:30:08] 2025-11-26 22:24:46,008 | INFO     | intersect: -4651445350.066577
[2025-11-26 23:30:08] 2025-11-26 22:24:46,010 | INFO     | chi2: 3.6025616713795423
[2025-11-26 23:30:08] 2025-11-26 22:24:46,011 | INFO     | sum of square deviations: 311947239588.475
[2025-11-26 23:30:08] 2025-11-26 22:24:46,032 | INFO     | sum of deviations: 1029711978290.2885
[2025-11-26 23:30:08] 2025-11-26 22:24:46,033 | INFO     | mean x: 1764164986.50499
[2025-11-26 23:30:08] 2025-11-26 22:24:46,033 | INFO     | mean y: 2299012.2425149702
[2025-11-26 23:30:08] 2025-11-26 22:24:46,033 | INFO     | intersect: -5821063363.654681
[2025-11-26 23:30:08] 2025-11-26 22:24:46,034 | INFO     | chi2: 1.8476472358501623
[2025-11-26 23:30:08] 2025-11-26 22:24:46,035 | INFO     | current chi2=1.8476472358501623 (change=48.71296026578121 %)
[2025-11-26 23:30:08] 2025-11-26 22:24:46,036 | INFO     | sum of square deviations: 307300633060.975
[2025-11-26 23:30:08] 2025-11-26 22:24:46,057 | INFO     | sum of deviations: 1027254142698.4308
[2025-11-26 23:30:08] 2025-11-26 22:24:46,057 | INFO     | mean x: 1764164834.0050151
[2025-11-26 23:30:08] 2025-11-26 22:24:46,057 | INFO     | mean y: 2298929.9137412235
[2025-11-26 23:30:08] 2025-11-26 22:24:46,058 | INFO     | intersect: -5895006311.806842
[2025-11-26 23:30:08] 2025-11-26 22:24:46,059 | INFO     | chi2: 1.8181817245263545
[2025-11-26 23:30:08] 2025-11-26 22:24:46,059 | INFO     | current chi2=1.8181817245263545 (change=1.5947584989214554 %)
[2025-11-26 23:30:08] 2025-11-26 22:24:46,059 | INFO     | right removable region: 996
[2025-11-26 23:30:08] 2025-11-26 22:24:46,060 | INFO     | sum of square deviations: 311947236538.475
[2025-11-26 23:30:08] 2025-11-26 22:24:46,066 | INFO     | monitor loop #4378: job 0:6893853426 is in state 'finished'
[2025-11-26 23:30:08] 2025-11-26 22:24:46,066 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:30:08] 2025-11-26 22:24:46,082 | INFO     | sum of deviations: 656018656369.618
[2025-11-26 23:30:08] 2025-11-26 22:24:46,082 | INFO     | mean x: 1764165291.50499
[2025-11-26 23:30:08] 2025-11-26 22:24:46,082 | INFO     | mean y: 2298511.876247505
[2025-11-26 23:30:08] 2025-11-26 22:24:46,082 | INFO     | intersect: -3707705003.4274597
[2025-11-26 23:30:08] 2025-11-26 22:24:46,084 | INFO     | chi2: 1.8584659917322661
[2025-11-26 23:30:08] 2025-11-26 22:24:46,084 | INFO     | current chi2=1.8584659917322661 (change=48.41265296034206 %)
[2025-11-26 23:30:08] 2025-11-26 22:24:46,085 | INFO     | sum of square deviations: 307300626960.97504
[2025-11-26 23:30:08] 2025-11-26 22:24:46,106 | INFO     | sum of deviations: 642784428053.9102
[2025-11-26 23:30:08] 2025-11-26 22:24:46,106 | INFO     | mean x: 1764165444.0050151
[2025-11-26 23:30:08] 2025-11-26 22:24:46,107 | INFO     | mean y: 2298945.6178535605
[2025-11-26 23:30:08] 2025-11-26 22:24:46,107 | INFO     | intersect: -3687827192.853199
[2025-11-26 23:30:08] 2025-11-26 22:24:46,108 | INFO     | chi2: 1.8564304197914994
[2025-11-26 23:30:08] 2025-11-26 22:24:46,108 | INFO     | current chi2=1.8564304197914994 (change=0.10952968468739158 %)
[2025-11-26 23:30:08] 2025-11-26 22:24:46,108 | INFO     | left removable region: 20
[2025-11-26 23:30:08] 2025-11-26 22:24:46,110 | INFO     | sum of square deviations: 288288557307.9744
[2025-11-26 23:30:08] 2025-11-26 22:24:46,129 | INFO     | sum of deviations: 833837867350.4652
[2025-11-26 23:30:08] 2025-11-26 22:24:46,130 | INFO     | mean x: 1764165413.505123
[2025-11-26 23:30:08] 2025-11-26 22:24:46,130 | INFO     | mean y: 2305149.007172131
[2025-11-26 23:30:08] 2025-11-26 22:24:46,130 | INFO     | intersect: -5100318207.906317
[2025-11-26 23:30:08] 2025-11-26 22:24:46,131 | INFO     | chi2: 0.046258518273744595
[2025-11-26 23:30:08] 2025-11-26 22:24:46,131 | INFO     | current memory leak: 2.89 B/s (using 976 data points, chi2=0.05)
[2025-11-26 23:30:08] 2025-11-26 22:24:46,132 | INFO     | could have reported an average CPU frequency of 2649 MHz (37 samples)
[2025-11-26 23:30:08] 2025-11-26 22:24:46,133 | INFO     | ..............................
[2025-11-26 23:30:08] 2025-11-26 22:24:46,133 | INFO     | . Timing measurements:
[2025-11-26 23:30:08] 2025-11-26 22:24:46,133 | INFO     | . get job = 0 s
[2025-11-26 23:30:08] 2025-11-26 22:24:46,133 | INFO     | . initial setup = 1 s
[2025-11-26 23:30:08] 2025-11-26 22:24:46,133 | INFO     | . payload setup = 6 s
[2025-11-26 23:30:08] 2025-11-26 22:24:46,133 | INFO     | . stage-in = 0 s
[2025-11-26 23:30:08] 2025-11-26 22:24:46,133 | INFO     | . payload execution = 61417 s
[2025-11-26 23:30:08] 2025-11-26 22:24:46,133 | INFO     | . stage-out = 2 s
[2025-11-26 23:30:08] 2025-11-26 22:24:46,133 | INFO     | . log creation = 0 s
[2025-11-26 23:30:08] 2025-11-26 22:24:46,133 | INFO     | ..............................
[2025-11-26 23:30:08] 2025-11-26 22:24:46,232 | INFO     | 
[2025-11-26 23:30:08] 2025-11-26 22:24:46,232 | INFO     | job summary report
[2025-11-26 23:30:08] 2025-11-26 22:24:46,232 | INFO     | --------------------------------------------------
[2025-11-26 23:30:08] 2025-11-26 22:24:46,232 | INFO     | PanDA job id: 6893853426
[2025-11-26 23:30:08] 2025-11-26 22:24:46,232 | INFO     | task id: 47523449
[2025-11-26 23:30:08] 2025-11-26 22:24:46,232 | INFO     | errors: (none)
[2025-11-26 23:30:08] 2025-11-26 22:24:46,233 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 23:30:08] 2025-11-26 22:24:46,233 | INFO     | pilot state: finished 
[2025-11-26 23:30:08] 2025-11-26 22:24:46,233 | INFO     | transexitcode: 0
[2025-11-26 23:30:08] 2025-11-26 22:24:46,233 | INFO     | exeerrorcode: 0
[2025-11-26 23:30:08] 2025-11-26 22:24:46,233 | INFO     | exeerrordiag: 
[2025-11-26 23:30:08] 2025-11-26 22:24:46,233 | INFO     | exitcode: 0
[2025-11-26 23:30:08] 2025-11-26 22:24:46,233 | INFO     | exitmsg: OK
[2025-11-26 23:30:08] 2025-11-26 22:24:46,233 | INFO     | cpuconsumptiontime: 241945 s
[2025-11-26 23:30:08] 2025-11-26 22:24:46,233 | INFO     | nevents: 1000
[2025-11-26 23:30:08] 2025-11-26 22:24:46,233 | INFO     | neventsw: 0
[2025-11-26 23:30:08] 2025-11-26 22:24:46,233 | INFO     | pid: 3946741
[2025-11-26 23:30:08] 2025-11-26 22:24:46,233 | INFO     | pgrp: 3946741
[2025-11-26 23:30:08] 2025-11-26 22:24:46,233 | INFO     | corecount: 4
[2025-11-26 23:30:08] 2025-11-26 22:24:46,234 | INFO     | event service: False
[2025-11-26 23:30:08] 2025-11-26 22:24:46,234 | INFO     | sizes: {0: 2284275, 5: 2284537, 11: 2284593, 61428: 2337190, 61432: 2346206, 61435: 2346262, 61442: 2346636}
[2025-11-26 23:30:08] 2025-11-26 22:24:46,234 | INFO     | --------------------------------------------------
[2025-11-26 23:30:08] 2025-11-26 22:24:46,234 | INFO     | 
[2025-11-26 23:30:08] 2025-11-26 22:24:46,234 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-11-26 23:30:08] 2025-11-26 22:24:46,254 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 23:30:08] 2025-11-26 22:24:46,255 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 23:30:08] 2025-11-26 22:24:46,255 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 23:30:08] 2025-11-26 22:24:46,255 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 23:30:08] 2025-11-26 22:24:46,255 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 23:30:08] 2025-11-26 22:24:46,255 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 23:30:08] 2025-11-26 22:24:46,256 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 23:30:08] 2025-11-26 22:24:46,256 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 23:30:08] 2025-11-26 22:24:46,256 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 23:30:08] 2025-11-26 22:24:46,256 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 23:30:08] 2025-11-26 22:24:46,256 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 23:30:08] 2025-11-26 22:24:46,256 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 23:30:08] 2025-11-26 22:24:46,256 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 23:30:08] 2025-11-26 22:24:46,256 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 23:30:08] 2025-11-26 22:24:46,256 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 23:30:08] 2025-11-26 22:24:46,256 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 23:30:08] 2025-11-26 22:24:46,256 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 23:30:08] 2025-11-26 22:24:46,257 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 23:30:08] 2025-11-26 22:24:46,257 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 23:30:08] 2025-11-26 22:24:46,257 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 23:30:08] 2025-11-26 22:24:46,257 | INFO     | job 6893853426 has completed (purged errors)
[2025-11-26 23:30:08] 2025-11-26 22:24:46,257 | INFO     | overall cleanup function is called
[2025-11-26 23:30:08] 2025-11-26 22:24:47,270 | INFO     | --- collectZombieJob: --- 10, [3946741]
[2025-11-26 23:30:08] 2025-11-26 22:24:47,271 | INFO     | zombie collector waiting for pid 3946741
[2025-11-26 23:30:08] 2025-11-26 22:24:47,271 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 23:30:08] 2025-11-26 22:24:47,271 | INFO     | collected zombie processes
[2025-11-26 23:30:08] 2025-11-26 22:24:47,271 | INFO     | will attempt to kill all subprocesses of pid=3946741
[2025-11-26 23:30:08] 2025-11-26 22:24:47,666 | INFO     | process IDs to be killed: [3946741] (in reverse order)
[2025-11-26 23:30:08] 2025-11-26 22:24:47,782 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 23:30:08] 2025-11-26 22:24:47,783 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 23:30:08] 2025-11-26 22:24:47,796 | INFO     | did not find any defunct processes belonging to 3946741
[2025-11-26 23:30:08] 2025-11-26 22:24:47,809 | INFO     | did not find any defunct processes belonging to 3946741
[2025-11-26 23:30:08] 2025-11-26 22:24:47,811 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 23:30:08] 2025-11-26 22:24:47,811 | INFO     | ready for new job
[2025-11-26 23:30:08] 2025-11-26 22:24:47,811 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 23:30:08] 2025-11-26 22:24:47,817 | INFO     | ***************************************
[2025-11-26 23:30:08] 2025-11-26 22:24:47,817 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 23:30:08] 2025-11-26 22:24:47,817 | INFO     | ***************************************
[2025-11-26 23:30:08] 2025-11-26 22:24:47,817 | INFO     | 
[2025-11-26 23:30:08] 2025-11-26 22:24:47,821 | INFO     | architecture information:
[2025-11-26 23:30:08] 2025-11-26 22:24:47,822 | INFO     | executing command: cat /etc/os-release
[2025-11-26 23:30:08] 2025-11-26 22:24:47,839 | INFO     | cat /etc/os-release:
[2025-11-26 23:30:08] NAME="CentOS Linux"
[2025-11-26 23:30:08] VERSION="7 (Core)"
[2025-11-26 23:30:08] ID="centos"
[2025-11-26 23:30:08] ID_LIKE="rhel fedora"
[2025-11-26 23:30:08] VERSION_ID="7"
[2025-11-26 23:30:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 23:30:08] ANSI_COLOR="0;31"
[2025-11-26 23:30:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 23:30:08] HOME_URL="https://www.centos.org/"
[2025-11-26 23:30:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 23:30:08] 
[2025-11-26 23:30:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 23:30:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 23:30:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 23:30:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 23:30:08] 
[2025-11-26 23:30:08] 2025-11-26 22:24:47,839 | INFO     | ***************************************
[2025-11-26 23:30:08] 2025-11-26 22:24:48,342 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-11-26 23:30:08] 2025-11-26 22:24:48,361 | INFO     | sufficient remaining disk space (675876438016 B)
[2025-11-26 23:30:08] 2025-11-26 22:24:48,361 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 23:30:08] 2025-11-26 22:24:48,362 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 23:30:08] 2025-11-26 22:24:48,362 | INFO     | update_server=False
[2025-11-26 23:30:08] 2025-11-26 22:24:48,362 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 23:30:08] 2025-11-26 22:24:48,520 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 23:30:08] 2025-11-26 22:24:48,540 | INFO     | all data control threads have been joined
[2025-11-26 23:30:08] 2025-11-26 22:24:48,569 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 23:30:08] 2025-11-26 22:24:48,569 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 23:30:08] 2025-11-26 22:24:48,570 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:30:08] 2025-11-26 22:24:48,570 | INFO     | will abort loop
[2025-11-26 23:30:08] 2025-11-26 22:24:49,093 | INFO     | all job control threads have been joined
[2025-11-26 23:30:08] 2025-11-26 22:24:49,367 | INFO     | [job] retrieve thread has finished
[2025-11-26 23:30:08] 2025-11-26 22:24:49,377 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 23:30:08] 2025-11-26 22:24:49,545 | INFO     | [data] control thread has finished
[2025-11-26 23:30:08] 2025-11-26 22:24:49,560 | INFO     | all payload control threads have been joined
[2025-11-26 23:30:08] 2025-11-26 22:24:49,575 | INFO     | [job] job monitor thread has finished
[2025-11-26 23:30:08] 2025-11-26 22:24:49,576 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 23:30:08] 2025-11-26 22:24:49,585 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 23:30:08] 2025-11-26 22:24:49,716 | INFO     | [payload] failed_post thread has finished
[2025-11-26 23:30:08] 2025-11-26 22:24:49,740 | INFO     | [data] copytool_in thread has finished
[2025-11-26 23:30:08] 2025-11-26 22:24:49,817 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 23:30:08] 2025-11-26 22:24:50,099 | INFO     | [job] control thread has finished
[2025-11-26 23:30:08] 2025-11-26 22:24:50,205 | INFO     | [job] validate thread has finished
[2025-11-26 23:30:08] 2025-11-26 22:24:50,506 | INFO     | [payload] validate_post thread has finished
[2025-11-26 23:30:08] 2025-11-26 22:24:50,525 | INFO     | [data] copytool_out thread has finished
[2025-11-26 23:30:08] 2025-11-26 22:24:50,566 | INFO     | [payload] control thread has finished
[2025-11-26 23:30:08] 2025-11-26 22:24:50,801 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 23:30:08] 2025-11-26 22:24:51,242 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:30:08] 2025-11-26 22:24:52,248 | INFO     | [job] queue monitor thread has finished
[2025-11-26 23:30:08] 2025-11-26 22:24:53,383 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 23:30:08] 2025-11-26 22:25:09,249 | INFO     | [monitor] cgroup control has ended
[2025-11-26 23:30:08] 2025-11-26 22:25:09,492 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23435617126208)>', '<ExcThread(monitor, started 23435377866496)>']
[2025-11-26 23:30:08] 2025-11-26 22:25:14,505 | INFO     | all workflow threads have been joined
[2025-11-26 23:30:08] 2025-11-26 22:25:14,505 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 23:30:08] 2025-11-26 22:25:14,506 | INFO     | traces error code: 0
[2025-11-26 23:30:08] 2025-11-26 22:25:14,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 23:30:08] 2025-11-26 22:25:18,169 | INFO     | PID=3939860 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 23:30:08] 2025-11-26 22:25:18,170 | INFO     | .. there are 3 such processes running
[2025-11-26 23:30:08] 2025-11-26 22:25:18,170 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 23:30:08] 2025-11-26 22:25:18,170 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 23:30:08] 2025-11-26 22:25:18,171 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 23:30:08] 2025-11-26 22:25:18,171 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 23:30:08] 2025-11-26 22:25:18,171 | CRITICAL | thread 'MainThread' is not alive
[2025-11-26 23:30:08] 2025-11-26 22:25:18,171 | INFO     | [monitor] control thread has ended
[2025-11-26 23:30:08] 2025-11-26 22:25:18,323 [wrapper] ==== pilot stdout END ====
[2025-11-26 23:30:08] 2025-11-26 22:25:18,326 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 23:30:08] 2025-11-26 22:25:18,329 [wrapper] pilotpid: 3939860
[2025-11-26 23:30:08] 2025-11-26 22:25:18,332 [wrapper] Pilot exit status: 0
[2025-11-26 23:30:08] 2025-11-26 22:25:18,344 [wrapper] pandaids: 6893853426
[2025-11-26 23:30:08] 2025-11-26 22:25:18,423 [wrapper] cleanup supervisor_pilot  536404 3939861
[2025-11-26 23:30:08] 2025-11-26 22:25:18,427 [wrapper] Test setup, not cleaning
[2025-11-26 23:30:08] 2025-11-26 22:25:18,430 [wrapper] apfmon messages muted
[2025-11-26 23:30:08] 2025-11-26 22:25:18,433 [wrapper] ==== wrapper stdout END ====
[2025-11-26 23:30:08] 2025-11-26 22:25:18,436 [wrapper] ==== wrapper stderr END ====
[2025-11-26 23:30:08]  *** Error codes and diagnostics ***
[2025-11-26 23:30:08]     "exeErrorCode": 0,
[2025-11-26 23:30:08]     "exeErrorDiag": "",
[2025-11-26 23:30:08]     "pilotErrorCode": 0,
[2025-11-26 23:30:08]     "pilotErrorDiag": "",
[2025-11-26 23:30:08]  *** Listing of results directory ***
[2025-11-26 23:30:08] total 1309040
[2025-11-26 23:30:08] -rw-r--r-- 1 boinc boinc    576529 Nov 20 13:07 pilot3.tar.gz
[2025-11-26 23:30:08] -rw-r--r-- 1 boinc boinc      5112 Nov 20 13:21 queuedata.json
[2025-11-26 23:30:08] -rwx------ 1 boinc boinc     36292 Nov 20 13:21 runpilot2-wrapper.sh
[2025-11-26 23:30:08] -rw-r--r-- 1 boinc boinc       100 Nov 26 06:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 23:30:08] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 06:20 run_atlas
[2025-11-26 23:30:08] -rw-r--r-- 1 boinc boinc       105 Nov 26 06:20 job.xml
[2025-11-26 23:30:08] -rw-r--r-- 1 boinc boinc      6635 Nov 26 06:20 init_data.xml
[2025-11-26 23:30:08] -rw-r--r-- 2 boinc boinc 408599554 Nov 26 06:20 EVNT.47493127._000413.pool.root.1
[2025-11-26 23:30:08] -rw-r--r-- 2 boinc boinc     15847 Nov 26 06:20 start_atlas.sh
[2025-11-26 23:30:08] drwxrwx--x 2 boinc boinc      4096 Nov 26 06:20 shared
[2025-11-26 23:30:08] -rw-r--r-- 2 boinc boinc    590098 Nov 26 06:20 input.tar.gz
[2025-11-26 23:30:08] -rw-r--r-- 1 boinc boinc         0 Nov 26 06:20 boinc_lockfile
[2025-11-26 23:30:08] -rw-r--r-- 1 boinc boinc      2785 Nov 26 06:20 pandaJob.out
[2025-11-26 23:30:08] -rw------- 1 boinc boinc    991877 Nov 26 06:20 agis_schedconf.cvmfs.json
[2025-11-26 23:30:08] drwx------ 5 boinc boinc      4096 Nov 26 06:20 pilot3
[2025-11-26 23:30:08] -rw-r--r-- 1 boinc boinc       531 Nov 26 23:17 boinc_task_state.xml
[2025-11-26 23:30:08] -rw------- 1 boinc boinc 907336046 Nov 26 23:23 HITS.47523449._004130.pool.root.1
[2025-11-26 23:30:08] -rw------- 1 boinc boinc      1045 Nov 26 23:24 memory_monitor_summary.json
[2025-11-26 23:30:08] -rw------- 1 boinc boinc   1516240 Nov 26 23:24 agis_ddmendpoints.agis.ALL.json
[2025-11-26 23:30:08] -rw------- 1 boinc boinc   1737909 Nov 26 23:24 log.47523449._004130.job.log.tgz.1
[2025-11-26 23:30:08] -rw------- 1 boinc boinc      8628 Nov 26 23:24 heartbeat.json
[2025-11-26 23:30:08] -rw------- 1 boinc boinc        95 Nov 26 23:25 pilot_heartbeat.json
[2025-11-26 23:30:08] -rw------- 1 boinc boinc       892 Nov 26 23:25 pilotlog.txt
[2025-11-26 23:30:08] -rw------- 1 boinc boinc   8566091 Nov 26 23:25 log.47523449._004130.job.log.1
[2025-11-26 23:30:08] -rw------- 1 boinc boinc       353 Nov 26 23:25 output.list
[2025-11-26 23:30:08] -rw-r--r-- 1 boinc boinc       620 Nov 26 23:25 runtime_log
[2025-11-26 23:30:08] -rw------- 1 boinc boinc  10321920 Nov 26 23:25 result.tar.gz
[2025-11-26 23:30:08] -rw-r--r-- 1 boinc boinc      9206 Nov 26 23:25 runtime_log.err
[2025-11-26 23:30:08] -rw------- 1 boinc boinc       670 Nov 26 23:25 ewcMDmUqIg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8kHKDmaIp6Gm.diag
[2025-11-26 23:30:08] -rw-r--r-- 1 boinc boinc        28 Nov 26 23:30 wrapper_checkpoint.txt
[2025-11-26 23:30:08] -rw-r--r-- 1 boinc boinc      8192 Nov 26 23:30 boinc_mmap_file
[2025-11-26 23:30:08] -rw-r--r-- 1 boinc boinc     21076 Nov 26 23:30 stderr.txt
[2025-11-26 23:30:08] HITS file was successfully produced:
[2025-11-26 23:30:08] -rw------- 1 boinc boinc 907336046 Nov 26 23:23 shared/HITS.pool.root.1
[2025-11-26 23:30:08]  *** Contents of shared directory: ***
[2025-11-26 23:30:08] total 1295780
[2025-11-26 23:30:08] -rw-r--r-- 2 boinc boinc 408599554 Nov 26 06:20 ATLAS.root_0
[2025-11-26 23:30:08] -rw-r--r-- 2 boinc boinc     15847 Nov 26 06:20 start_atlas.sh
[2025-11-26 23:30:08] -rw-r--r-- 2 boinc boinc    590098 Nov 26 06:20 input.tar.gz
[2025-11-26 23:30:08] -rw------- 1 boinc boinc 907336046 Nov 26 23:23 HITS.pool.root.1
[2025-11-26 23:30:08] -rw------- 1 boinc boinc  10321920 Nov 26 23:25 result.tar.gz
23:30:10 (3936109): run_atlas exited; CPU time 244450.565387
23:30:10 (3936109): called boinc_finish(0)

</stderr_txt>
]]>

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