Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:43:38 (1252236): wrapper (7.7.26015): starting
11:43:38 (1252236): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 11:43:38] Arguments: --nthreads 8
[2025-11-20 11:43:38] Threads: 8
[2025-11-20 11:43:38] Checking for CVMFS
[2025-11-20 11:43:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 11:43:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 11:43:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 11:43:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 11:43:39] 2.11.3.0 733561 20181 203348 153094 0 514 27475449 45568001 14655 130560 0 140842091 99.794 95726996 21750 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-11-20 11:43:39] CVMFS is ok
[2025-11-20 11:43:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 11:43:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 11:43:39] Further information can be found at the LHC@home message board.
[2025-11-20 11:43:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 11:43:39] Checking for apptainer binary...
[2025-11-20 11:43:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 11:43:39] Running /usr/bin/apptainer --version
[2025-11-20 11:43:39] apptainer version 1.4.1-1.el9
[2025-11-20 11:43:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 11:43:40] wns0024.triumf.lcg
[2025-11-20 11:43:40] apptainer works
[2025-11-20 11:43:40] Set ATHENA_PROC_NUMBER=8
[2025-11-20 11:43:40] Set ATHENA_CORE_NUMBER=8
[2025-11-20 11:43:40] Starting ATLAS job with PandaID=6893870412
[2025-11-20 11:43:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 11:52:28]  *** The last 200 lines of the pilot log: ***
[2025-11-20 11:52:28] 2025-11-20 19:51:24,522 | WARNING  | wrong length of table data, x=[1763667952.0, 1763668013.0, 1763668074.0, 1763668135.0], y=[1581.0, 610955.0, 905715.0, 737037.0] (must be same and length>=4)
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | ..............................
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | . Timing measurements:
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | . get job = 0 s
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | . initial setup = 6 s
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | . payload setup = 31 s
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | . stage-in = 0 s
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | . payload execution = 211 s
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | . stage-out = 0 s
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | . log creation = 0 s
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | ..............................
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 11:52:28] 2025-11-20 19:51:24,524 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893870412/pilotlog.txt
[2025-11-20 11:52:28] 2025-11-20 19:51:24,647 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-20 11:52:28] - Log from pilotlog.txt -
[2025-11-20 11:52:28] 2025-11-20 19:51:24,520 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6893870412/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 11:52:28] 2025-11-20 19:51:24,520 | INFO     | extracted standard info from prmon json
[2025-11-20 11:52:28] 2025-11-20 19:51:24,521 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 11:52:28] 2025-11-20 19:51:24,521 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 11:52:28] 2025-11-20 19:51:24,521 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-20 11:52:28] 2025-11-20 19:51:24,521 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-20 11:52:28] 2025-11-20 19:51:24,522 | WARNING  | wrong length of table data, x=[1763667952.0, 1763668013.0, 1763668074.0, 1763668135.0], y=[1581.0, 610955.0, 905715.0, 737037.0] (must be same and length>=4)
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | ..............................
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | . Timing measurements:
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | . get job = 0 s
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | . initial setup = 6 s
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | . payload setup = 31 s
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | . stage-in = 0 s
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | . payload execution = 211 s
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | . stage-out = 0 s
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | . log creation = 0 s
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | ..............................
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 11:52:28] 2025-11-20 19:51:24,524 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893870412/pilotlog.txt
[2025-11-20 11:52:28] 2025-11-20 19:51:24,648 | WARNING  | 
[2025-11-20 11:52:28] [begin log extracts]
[2025-11-20 11:52:28] - Log from pilotlog.txt -
[2025-11-20 11:52:28] 2025-11-20 19:51:24,520 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6893870412/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 11:52:28] 2025-11-20 19:51:24,520 | INFO     | extracted standard info from prmon json
[2025-11-20 11:52:28] 2025-11-20 19:51:24,521 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 11:52:28] 2025-11-20 19:51:24,521 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 11:52:28] 2025-11-20 19:51:24,521 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-20 11:52:28] 2025-11-20 19:51:24,521 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-20 11:52:28] 2025-11-20 19:51:24,522 | WARNING  | wrong length of table data, x=[1763667952.0, 1763668013.0, 1763668074.0, 1763668135.0], y=[1581.0, 610955.0, 905715.0, 737037.0] (must be same and length>=4)
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | ..............................
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | . Timing measurements:
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | . get job = 0 s
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | . initial setup = 6 s
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | . payload setup = 31 s
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | . stage-in = 0 s
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | . payload execution = 211 s
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | . stage-out = 0 s
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | . log creation = 0 s
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | ..............................
[2025-11-20 11:52:28] 2025-11-20 19:51:24,523 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 11:52:28] 2025-11-20 19:51:24,524 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893870412/pilotlog.txt
[2025-11-20 11:52:28] [end log extracts]
[2025-11-20 11:52:28] 2025-11-20 19:51:24,648 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-20 11:52:28] 2025-11-20 19:51:24,648 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-20 11:52:28] 2025-11-20 19:51:24,809 | INFO     | time since job start (423s) is within the limit (172800.0s)
[2025-11-20 11:52:28] 2025-11-20 19:51:24,859 | INFO     | 
[2025-11-20 11:52:28] 2025-11-20 19:51:24,860 | INFO     | job summary report
[2025-11-20 11:52:28] 2025-11-20 19:51:24,860 | INFO     | --------------------------------------------------
[2025-11-20 11:52:28] 2025-11-20 19:51:24,860 | INFO     | PanDA job id: 6893870412
[2025-11-20 11:52:28] 2025-11-20 19:51:24,861 | INFO     | task id: 47523449
[2025-11-20 11:52:28] 2025-11-20 19:51:24,861 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-20 11:49:00,063 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-20 11:52:28] 2025-11-20 19:51:24,861 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-20 11:52:28] 2025-11-20 19:51:24,861 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 11:52:28] 2025-11-20 19:51:24,861 | INFO     | pilot state: failed 
[2025-11-20 11:52:28] 2025-11-20 19:51:24,861 | INFO     | transexitcode: 65
[2025-11-20 11:52:28] 2025-11-20 19:51:24,861 | INFO     | exeerrorcode: 65
[2025-11-20 11:52:28] 2025-11-20 19:51:24,861 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-20 11:52:28] 2025-11-20 19:51:24,861 | INFO     | exitcode: 65
[2025-11-20 11:52:28] 2025-11-20 19:51:24,861 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-20 11:52:28] 2025-11-20 19:51:24,861 | INFO     | cpuconsumptiontime: 55 s
[2025-11-20 11:52:28] 2025-11-20 19:51:24,861 | INFO     | nevents: 0
[2025-11-20 11:52:28] 2025-11-20 19:51:24,861 | INFO     | neventsw: 0
[2025-11-20 11:52:28] 2025-11-20 19:51:24,861 | INFO     | pid: 1267377
[2025-11-20 11:52:28] 2025-11-20 19:51:24,862 | INFO     | pgrp: 1267377
[2025-11-20 11:52:28] 2025-11-20 19:51:24,862 | INFO     | corecount: 8
[2025-11-20 11:52:28] 2025-11-20 19:51:24,862 | INFO     | event service: False
[2025-11-20 11:52:28] 2025-11-20 19:51:24,862 | INFO     | sizes: {0: 2297978, 1: 2298831, 12: 2298831, 15: 2299121, 23: 2299149, 247: 2324761, 248: 2329079, 385: 2329217}
[2025-11-20 11:52:28] 2025-11-20 19:51:24,862 | INFO     | --------------------------------------------------
[2025-11-20 11:52:28] 2025-11-20 19:51:24,862 | INFO     | 
[2025-11-20 11:52:28] 2025-11-20 19:51:24,862 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-20 11:52:28] 2025-11-20 19:51:25,080 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 11:52:28] 2025-11-20 19:51:25,081 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 11:52:28] 2025-11-20 19:51:25,081 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 11:52:28] 2025-11-20 19:51:25,081 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 11:52:28] 2025-11-20 19:51:25,081 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 11:52:28] 2025-11-20 19:51:25,081 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 11:52:28] 2025-11-20 19:51:25,081 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 11:52:28] 2025-11-20 19:51:25,081 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 11:52:28] 2025-11-20 19:51:25,081 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 11:52:28] 2025-11-20 19:51:25,081 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 11:52:28] 2025-11-20 19:51:25,081 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 11:52:28] 2025-11-20 19:51:25,081 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 11:52:28] 2025-11-20 19:51:25,081 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 11:52:28] 2025-11-20 19:51:25,082 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 11:52:28] 2025-11-20 19:51:25,082 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 11:52:28] 2025-11-20 19:51:25,082 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 11:52:28] 2025-11-20 19:51:25,082 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 11:52:28] 2025-11-20 19:51:25,082 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 11:52:28] 2025-11-20 19:51:25,082 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 11:52:28] 2025-11-20 19:51:25,082 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 11:52:28] 2025-11-20 19:51:25,082 | INFO     | job 6893870412 has completed (purged errors)
[2025-11-20 11:52:28] 2025-11-20 19:51:25,082 | INFO     | overall cleanup function is called
[2025-11-20 11:52:28] 2025-11-20 19:51:26,120 | INFO     | --- collectZombieJob: --- 10, [1267377]
[2025-11-20 11:52:28] 2025-11-20 19:51:26,120 | INFO     | zombie collector waiting for pid 1267377
[2025-11-20 11:52:28] 2025-11-20 19:51:26,120 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 11:52:28] 2025-11-20 19:51:26,120 | INFO     | collected zombie processes
[2025-11-20 11:52:28] 2025-11-20 19:51:26,121 | INFO     | will attempt to kill all subprocesses of pid=1267377
[2025-11-20 11:52:28] 2025-11-20 19:51:26,915 | INFO     | process IDs to be killed: [1267377] (in reverse order)
[2025-11-20 11:52:28] 2025-11-20 19:51:26,982 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 11:52:28] 2025-11-20 19:51:26,983 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 11:52:28] 2025-11-20 19:51:27,012 | INFO     | did not find any defunct processes belonging to 1267377
[2025-11-20 11:52:28] 2025-11-20 19:51:27,052 | INFO     | did not find any defunct processes belonging to 1267377
[2025-11-20 11:52:28] 2025-11-20 19:51:27,053 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 11:52:28] 2025-11-20 19:51:27,053 | INFO     | ready for new job
[2025-11-20 11:52:28] 2025-11-20 19:51:27,053 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 11:52:28] 2025-11-20 19:51:27,058 | INFO     | ***************************************
[2025-11-20 11:52:28] 2025-11-20 19:51:27,058 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 11:52:28] 2025-11-20 19:51:27,058 | INFO     | ***************************************
[2025-11-20 11:52:28] 2025-11-20 19:51:27,059 | INFO     | 
[2025-11-20 11:52:28] 2025-11-20 19:51:27,060 | INFO     | architecture information:
[2025-11-20 11:52:28] 2025-11-20 19:51:27,099 | INFO     | executing command: cat /etc/os-release
[2025-11-20 11:52:28] 2025-11-20 19:51:27,114 | INFO     | cat /etc/os-release:
[2025-11-20 11:52:28] NAME="CentOS Linux"
[2025-11-20 11:52:28] VERSION="7 (Core)"
[2025-11-20 11:52:28] ID="centos"
[2025-11-20 11:52:28] ID_LIKE="rhel fedora"
[2025-11-20 11:52:28] VERSION_ID="7"
[2025-11-20 11:52:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 11:52:28] ANSI_COLOR="0;31"
[2025-11-20 11:52:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 11:52:28] HOME_URL="https://www.centos.org/"
[2025-11-20 11:52:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 11:52:28] 
[2025-11-20 11:52:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 11:52:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 11:52:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 11:52:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 11:52:28] 
[2025-11-20 11:52:28] 2025-11-20 19:51:27,114 | INFO     | ***************************************
[2025-11-20 11:52:28] 2025-11-20 19:51:27,618 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-20 11:52:28] 2025-11-20 19:51:27,659 | INFO     | sufficient remaining disk space (1057658765312 B)
[2025-11-20 11:52:28] 2025-11-20 19:51:27,659 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 11:52:28] 2025-11-20 19:51:27,660 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 11:52:28] 2025-11-20 19:51:27,660 | INFO     | update_server=False
[2025-11-20 11:52:28] 2025-11-20 19:51:27,660 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 11:52:28] 2025-11-20 19:51:27,660 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 11:52:28] 2025-11-20 19:51:27,660 | INFO     | aborting loop
[2025-11-20 11:52:28] 2025-11-20 19:51:27,660 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 11:52:28] 2025-11-20 19:51:28,517 | INFO     | all data control threads have been joined
[2025-11-20 11:52:28] 2025-11-20 19:51:28,554 | INFO     | all payload control threads have been joined
[2025-11-20 11:52:28] 2025-11-20 19:51:28,666 | INFO     | [job] retrieve thread has finished
[2025-11-20 11:52:28] 2025-11-20 19:51:28,667 | INFO     | [job] job monitor thread has finished
[2025-11-20 11:52:28] 2025-11-20 19:51:28,841 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 11:52:28] 2025-11-20 19:51:29,032 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 11:52:28] 2025-11-20 19:51:29,176 | INFO     | all job control threads have been joined
[2025-11-20 11:52:28] 2025-11-20 19:51:29,186 | INFO     | [payload] validate_post thread has finished
[2025-11-20 11:52:28] 2025-11-20 19:51:29,471 | INFO     | [data] copytool_in thread has finished
[2025-11-20 11:52:28] 2025-11-20 19:51:29,523 | INFO     | [data] control thread has finished
[2025-11-20 11:52:28] 2025-11-20 19:51:29,536 | INFO     | [job] validate thread has finished
[2025-11-20 11:52:28] 2025-11-20 19:51:29,560 | INFO     | [payload] control thread has finished
[2025-11-20 11:52:28] 2025-11-20 19:51:29,593 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 11:52:28] 2025-11-20 19:51:29,667 | INFO     | [data] copytool_out thread has finished
[2025-11-20 11:52:28] 2025-11-20 19:51:29,885 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 11:52:28] 2025-11-20 19:51:29,995 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 11:52:28] 2025-11-20 19:51:29,996 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 11:52:28] 2025-11-20 19:51:30,182 | INFO     | [job] control thread has finished
[2025-11-20 11:52:28] 2025-11-20 19:51:30,255 | INFO     | [payload] failed_post thread has finished
[2025-11-20 11:52:28] 2025-11-20 19:51:30,904 | INFO     | [job] queue monitor thread has finished
[2025-11-20 11:52:28] 2025-11-20 19:51:33,602 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 11:52:28] 2025-11-20 19:51:59,552 | INFO     | PID=1260599 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-20 11:52:28] 2025-11-20 19:51:59,552 | INFO     | .. there are 26 such processes running
[2025-11-20 11:52:28] 2025-11-20 19:51:59,553 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 11:52:28] 2025-11-20 19:51:59,553 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 11:52:28] 2025-11-20 19:51:59,553 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 11:52:28] 2025-11-20 19:52:21,469 | INFO     | [monitor] cgroup control has ended
[2025-11-20 11:52:28] 2025-11-20 19:52:21,808 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140329340929856)>', '<ExcThread(monitor, started 140328476579584)>']
[2025-11-20 11:52:28] 2025-11-20 19:52:22,726 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 11:52:28] 2025-11-20 19:52:22,726 | INFO     | [monitor] control thread has ended
[2025-11-20 11:52:28] 2025-11-20 19:52:26,835 | INFO     | all workflow threads have been joined
[2025-11-20 11:52:28] 2025-11-20 19:52:26,835 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 11:52:28] 2025-11-20 19:52:26,836 | INFO     | traces error code: 0
[2025-11-20 11:52:28] 2025-11-20 19:52:26,836 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 11:52:28] 2025-11-20 19:52:27,609 [wrapper] ==== pilot stdout END ====
[2025-11-20 11:52:28] 2025-11-20 19:52:27,619 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 11:52:28] 2025-11-20 19:52:27,633 [wrapper] pilotpid: 1260599
[2025-11-20 11:52:28] 2025-11-20 19:52:27,636 [wrapper] Pilot exit status: 0
[2025-11-20 11:52:28] 2025-11-20 19:52:27,719 [wrapper] pandaids: 6893870412
[2025-11-20 11:52:28] 2025-11-20 19:52:28,005 [wrapper] cleanup supervisor_pilot 1260605 1260600
[2025-11-20 11:52:28] 2025-11-20 19:52:28,052 [wrapper] Test setup, not cleaning
[2025-11-20 11:52:28] 2025-11-20 19:52:28,065 [wrapper] apfmon messages muted
[2025-11-20 11:52:28] 2025-11-20 19:52:28,068 [wrapper] ==== wrapper stdout END ====
[2025-11-20 11:52:28] 2025-11-20 19:52:28,076 [wrapper] ==== wrapper stderr END ====
[2025-11-20 11:52:28]  *** Error codes and diagnostics ***
[2025-11-20 11:52:28]     "exeErrorCode": 65,
[2025-11-20 11:52:28]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-20 11:52:28]     "pilotErrorCode": 1305,
[2025-11-20 11:52:28]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-20 11:52:28]  *** Listing of results directory ***
[2025-11-20 11:52:28] total 403936
[2025-11-20 11:52:28] -rw-r--r--. 1 boinc boinc    576529 Nov 20 06:50 pilot3.tar.gz
[2025-11-20 11:52:28] -rw-r--r--. 1 boinc boinc      5112 Nov 20 06:52 queuedata.json
[2025-11-20 11:52:28] -rwx------. 1 boinc boinc     36292 Nov 20 06:54 runpilot2-wrapper.sh
[2025-11-20 11:52:28] -rw-r--r--. 1 boinc boinc       100 Nov 20 11:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 11:52:28] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 11:43 run_atlas
[2025-11-20 11:52:28] -rw-r--r--. 1 boinc boinc       105 Nov 20 11:43 job.xml
[2025-11-20 11:52:28] -rw-r--r--. 1 boinc boinc      6445 Nov 20 11:43 init_data.xml
[2025-11-20 11:52:28] -rw-r--r--. 2 boinc boinc 409372977 Nov 20 11:43 EVNT.47493127._000655.pool.root.1
[2025-11-20 11:52:28] -rw-r--r--. 2 boinc boinc     15847 Nov 20 11:43 start_atlas.sh
[2025-11-20 11:52:28] drwxrwx--x. 2 boinc boinc      4096 Nov 20 11:43 shared
[2025-11-20 11:52:28] -rw-r--r--. 2 boinc boinc    590101 Nov 20 11:43 input.tar.gz
[2025-11-20 11:52:28] -rw-r--r--. 1 boinc boinc         0 Nov 20 11:43 boinc_lockfile
[2025-11-20 11:52:28] -rw-r--r--. 1 boinc boinc      2785 Nov 20 11:43 pandaJob.out
[2025-11-20 11:52:28] -rw-------. 1 boinc boinc    989464 Nov 20 11:44 agis_schedconf.cvmfs.json
[2025-11-20 11:52:28] -rw-------. 1 boinc boinc   1526164 Nov 20 11:44 agis_ddmendpoints.agis.ALL.json
[2025-11-20 11:52:28] drwx------. 5 boinc boinc      4096 Nov 20 11:44 pilot3
[2025-11-20 11:52:28] -rw-r--r--. 1 boinc boinc       524 Nov 20 11:48 boinc_task_state.xml
[2025-11-20 11:52:28] -rw-------. 1 boinc boinc      1015 Nov 20 11:49 memory_monitor_summary.json
[2025-11-20 11:52:28] -rw-------. 1 boinc boinc     51448 Nov 20 11:49 log.47523449._006543.job.log.tgz.1
[2025-11-20 11:52:28] -rw-------. 1 boinc boinc        95 Nov 20 11:51 pilot_heartbeat.json
[2025-11-20 11:52:28] -rw-------. 1 boinc boinc     10333 Nov 20 11:51 heartbeat.json
[2025-11-20 11:52:28] -rw-r--r--. 1 boinc boinc      8192 Nov 20 11:52 boinc_mmap_file
[2025-11-20 11:52:28] -rw-r--r--. 1 boinc boinc        23 Nov 20 11:52 wrapper_checkpoint.txt
[2025-11-20 11:52:28] -rw-------. 1 boinc boinc      4823 Nov 20 11:52 pilotlog.txt
[2025-11-20 11:52:28] -rw-------. 1 boinc boinc    118723 Nov 20 11:52 log.47523449._006543.job.log.1
[2025-11-20 11:52:28] -rw-------. 1 boinc boinc       186 Nov 20 11:52 output.list
[2025-11-20 11:52:28] -rw-r--r--. 1 boinc boinc       620 Nov 20 11:52 runtime_log
[2025-11-20 11:52:28] -rw-------. 1 boinc boinc    194560 Nov 20 11:52 result.tar.gz
[2025-11-20 11:52:28] -rw-r--r--. 1 boinc boinc      8634 Nov 20 11:52 runtime_log.err
[2025-11-20 11:52:28] -rw-------. 1 boinc boinc       644 Nov 20 11:52 2jbMDmAELg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQpGKDmMjethn.diag
[2025-11-20 11:52:28] -rw-r--r--. 1 boinc boinc     22641 Nov 20 11:52 stderr.txt
[2025-11-20 11:52:28] No HITS result produced
[2025-11-20 11:52:28]  *** Contents of shared directory: ***
[2025-11-20 11:52:28] total 400568
[2025-11-20 11:52:28] -rw-r--r--. 2 boinc boinc 409372977 Nov 20 11:43 ATLAS.root_0
[2025-11-20 11:52:28] -rw-r--r--. 2 boinc boinc     15847 Nov 20 11:43 start_atlas.sh
[2025-11-20 11:52:28] -rw-r--r--. 2 boinc boinc    590101 Nov 20 11:43 input.tar.gz
[2025-11-20 11:52:28] -rw-------. 1 boinc boinc    194560 Nov 20 11:52 result.tar.gz
11:52:30 (1252236): run_atlas exited; CPU time 60.373520
11:52:30 (1252236): called boinc_finish(0)

</stderr_txt>
]]>

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