Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:11:56 (1815842): wrapper (7.7.26015): starting
01:11:56 (1815842): wrapper: running run_atlas (--nthreads 4)
[2025-11-21 01:11:56] Arguments: --nthreads 4
[2025-11-21 01:11:56] Threads: 4
[2025-11-21 01:11:56] Checking for CVMFS
[2025-11-21 01:11:56] No cvmfs_config command found, will try listing directly
[2025-11-21 01:11:56] CVMFS is ok
[2025-11-21 01:11:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 01:11:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 01:11:56] Further information can be found at the LHC@home message board.
[2025-11-21 01:11:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 01:11:56] Checking for apptainer binary...
[2025-11-21 01:11:56] which: no apptainer in ((null))
[2025-11-21 01:11:56] apptainer is not installed, using version from CVMFS
[2025-11-21 01:11:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 01:11:57] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-11-21 01:11:57] apptainer works
[2025-11-21 01:11:57] Set ATHENA_PROC_NUMBER=4
[2025-11-21 01:11:57] Set ATHENA_CORE_NUMBER=4
[2025-11-21 01:11:57] Starting ATLAS job with PandaID=6893840241
[2025-11-21 01:11:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 21:47:34]  *** The last 200 lines of the pilot log: ***
[2025-11-21 21:47:34] 2025-11-21 20:35:34,055 | INFO     | monitor loop #4948: job 0:6893840241 is in state 'finished'
[2025-11-21 21:47:34] 2025-11-21 20:35:34,055 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 21:47:34] 2025-11-21 20:35:35,154 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-21 21:47:34] 2025-11-21 20:35:35,165 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2705.996500000001
[2025-11-21 21:47:34] 2025-11-21 20:35:35,180 | INFO     | using path: /scratch/boinc/var/slot60/slots/1/PanDA_Pilot-6893840241/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 21:47:34] 2025-11-21 20:35:35,181 | INFO     | extracted standard info from prmon json
[2025-11-21 21:47:34] 2025-11-21 20:35:35,181 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 21:47:34] 2025-11-21 20:35:35,181 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 21:47:34] 2025-11-21 20:35:35,203 | INFO     | fitting pss+swap vs Time
[2025-11-21 21:47:34] 2025-11-21 20:35:35,205 | INFO     | sum of square deviations: 539852634174.962
[2025-11-21 21:47:34] 2025-11-21 20:35:35,236 | INFO     | sum of deviations: 1722570004596.7139
[2025-11-21 21:47:34] 2025-11-21 20:35:35,236 | INFO     | mean x: 1763720618.4438903
[2025-11-21 21:47:34] 2025-11-21 20:35:35,236 | INFO     | mean y: 2298696.5735660847
[2025-11-21 21:47:34] 2025-11-21 20:35:35,236 | INFO     | intersect: -5625407906.105669
[2025-11-21 21:47:34] 2025-11-21 20:35:35,238 | INFO     | chi2: 3.5302255365413293
[2025-11-21 21:47:34] 2025-11-21 20:35:35,240 | INFO     | sum of square deviations: 533149406241.47296
[2025-11-21 21:47:34] 2025-11-21 20:35:35,269 | INFO     | sum of deviations: 1942003047334.209
[2025-11-21 21:47:34] 2025-11-21 20:35:35,270 | INFO     | mean x: 1763720465.9457428
[2025-11-21 21:47:34] 2025-11-21 20:35:35,270 | INFO     | mean y: 2303685.7570951586
[2025-11-21 21:47:34] 2025-11-21 20:35:35,270 | INFO     | intersect: -6422069068.699338
[2025-11-21 21:47:34] 2025-11-21 20:35:35,272 | INFO     | chi2: 1.8697646189407287
[2025-11-21 21:47:34] 2025-11-21 20:35:35,272 | INFO     | current chi2=1.8697646189407287 (change=47.03554774087905 %)
[2025-11-21 21:47:34] 2025-11-21 20:35:35,274 | INFO     | sum of square deviations: 526501900282.97577
[2025-11-21 21:47:34] 2025-11-21 20:35:35,303 | INFO     | sum of deviations: 1928580013126.364
[2025-11-21 21:47:34] 2025-11-21 20:35:35,303 | INFO     | mean x: 1763720313.447611
[2025-11-21 21:47:34] 2025-11-21 20:35:35,303 | INFO     | mean y: 2303377.2858340316
[2025-11-21 21:47:34] 2025-11-21 20:35:35,303 | INFO     | intersect: -6458216030.966743
[2025-11-21 21:47:34] 2025-11-21 20:35:35,305 | INFO     | chi2: 1.8621719056711945
[2025-11-21 21:47:34] 2025-11-21 20:35:35,305 | INFO     | current chi2=1.8621719056711945 (change=0.4060785615804207 %)
[2025-11-21 21:47:34] 2025-11-21 20:35:35,305 | INFO     | right removable region: 1192
[2025-11-21 21:47:34] 2025-11-21 20:35:35,307 | INFO     | sum of square deviations: 533149080501.473
[2025-11-21 21:47:34] 2025-11-21 20:35:35,336 | INFO     | sum of deviations: 1497970407386.771
[2025-11-21 21:47:34] 2025-11-21 20:35:35,336 | INFO     | mean x: 1763720770.9457428
[2025-11-21 21:47:34] 2025-11-21 20:35:35,337 | INFO     | mean y: 2303799.6118530883
[2025-11-21 21:47:34] 2025-11-21 20:35:35,337 | INFO     | intersect: -4953161038.262523
[2025-11-21 21:47:34] 2025-11-21 20:35:35,340 | INFO     | chi2: 1.7542022246563957
[2025-11-21 21:47:34] 2025-11-21 20:35:35,340 | INFO     | current chi2=1.7542022246563957 (change=50.309060809326034 %)
[2025-11-21 21:47:34] 2025-11-21 20:35:35,341 | INFO     | sum of square deviations: 526501248802.9753
[2025-11-21 21:47:34] 2025-11-21 20:35:35,371 | INFO     | sum of deviations: 1456258213692.9338
[2025-11-21 21:47:34] 2025-11-21 20:35:35,372 | INFO     | mean x: 1763720923.447611
[2025-11-21 21:47:34] 2025-11-21 20:35:35,372 | INFO     | mean y: 2304756.134953898
[2025-11-21 21:47:34] 2025-11-21 20:35:35,372 | INFO     | intersect: -4875999117.354654
[2025-11-21 21:47:34] 2025-11-21 20:35:35,373 | INFO     | chi2: 1.7377861160870238
[2025-11-21 21:47:34] 2025-11-21 20:35:35,374 | INFO     | current chi2=1.7377861160870238 (change=0.9358161983056102 %)
[2025-11-21 21:47:34] 2025-11-21 20:35:35,374 | INFO     | left removable region: 20
[2025-11-21 21:47:34] 2025-11-21 20:35:35,375 | INFO     | sum of square deviations: 499184307793.6928
[2025-11-21 21:47:34] 2025-11-21 20:35:35,404 | INFO     | sum of deviations: 1601934322447.2727
[2025-11-21 21:47:34] 2025-11-21 20:35:35,404 | INFO     | mean x: 1763720892.9556315
[2025-11-21 21:47:34] 2025-11-21 20:35:35,404 | INFO     | mean y: 2310788.178327645
[2025-11-21 21:47:34] 2025-11-21 20:35:35,404 | INFO     | intersect: -5657652855.572007
[2025-11-21 21:47:34] 2025-11-21 20:35:35,406 | INFO     | chi2: 0.05947822692850727
[2025-11-21 21:47:34] 2025-11-21 20:35:35,406 | INFO     | current memory leak: 3.21 B/s (using 1172 data points, chi2=0.06)
[2025-11-21 21:47:34] 2025-11-21 20:35:35,407 | INFO     | could have reported an average CPU frequency of 2618 MHz (44 samples)
[2025-11-21 21:47:34] 2025-11-21 20:35:35,408 | INFO     | ..............................
[2025-11-21 21:47:34] 2025-11-21 20:35:35,408 | INFO     | . Timing measurements:
[2025-11-21 21:47:34] 2025-11-21 20:35:35,408 | INFO     | . get job = 0 s
[2025-11-21 21:47:34] 2025-11-21 20:35:35,408 | INFO     | . initial setup = 1 s
[2025-11-21 21:47:34] 2025-11-21 20:35:35,408 | INFO     | . payload setup = 6 s
[2025-11-21 21:47:34] 2025-11-21 20:35:35,408 | INFO     | . stage-in = 0 s
[2025-11-21 21:47:34] 2025-11-21 20:35:35,408 | INFO     | . payload execution = 73371 s
[2025-11-21 21:47:34] 2025-11-21 20:35:35,408 | INFO     | . stage-out = 2 s
[2025-11-21 21:47:34] 2025-11-21 20:35:35,408 | INFO     | . log creation = 0 s
[2025-11-21 21:47:34] 2025-11-21 20:35:35,408 | INFO     | ..............................
[2025-11-21 21:47:34] 2025-11-21 20:35:35,816 | INFO     | time since job start (73406s) is within the limit (172800.0s)
[2025-11-21 21:47:34] 2025-11-21 20:35:35,948 | INFO     | 
[2025-11-21 21:47:34] 2025-11-21 20:35:35,949 | INFO     | job summary report
[2025-11-21 21:47:34] 2025-11-21 20:35:35,949 | INFO     | --------------------------------------------------
[2025-11-21 21:47:34] 2025-11-21 20:35:35,949 | INFO     | PanDA job id: 6893840241
[2025-11-21 21:47:34] 2025-11-21 20:35:35,949 | INFO     | task id: 47523449
[2025-11-21 21:47:34] 2025-11-21 20:35:35,949 | INFO     | errors: (none)
[2025-11-21 21:47:34] 2025-11-21 20:35:35,949 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 21:47:34] 2025-11-21 20:35:35,949 | INFO     | pilot state: finished 
[2025-11-21 21:47:34] 2025-11-21 20:35:35,949 | INFO     | transexitcode: 0
[2025-11-21 21:47:34] 2025-11-21 20:35:35,950 | INFO     | exeerrorcode: 0
[2025-11-21 21:47:34] 2025-11-21 20:35:35,950 | INFO     | exeerrordiag: 
[2025-11-21 21:47:34] 2025-11-21 20:35:35,950 | INFO     | exitcode: 0
[2025-11-21 21:47:34] 2025-11-21 20:35:35,950 | INFO     | exitmsg: OK
[2025-11-21 21:47:34] 2025-11-21 20:35:35,950 | INFO     | cpuconsumptiontime: 272614 s
[2025-11-21 21:47:34] 2025-11-21 20:35:35,950 | INFO     | nevents: 1000
[2025-11-21 21:47:34] 2025-11-21 20:35:35,950 | INFO     | neventsw: 0
[2025-11-21 21:47:34] 2025-11-21 20:35:35,950 | INFO     | pid: 1827002
[2025-11-21 21:47:34] 2025-11-21 20:35:35,950 | INFO     | pgrp: 1827002
[2025-11-21 21:47:34] 2025-11-21 20:35:35,950 | INFO     | corecount: 4
[2025-11-21 21:47:34] 2025-11-21 20:35:35,950 | INFO     | event service: False
[2025-11-21 21:47:34] 2025-11-21 20:35:35,950 | INFO     | sizes: {0: 2298647, 1: 2298846, 5: 2299108, 11: 2299164, 73382: 2360077, 73384: 2369277, 73390: 2369467}
[2025-11-21 21:47:34] 2025-11-21 20:35:35,951 | INFO     | --------------------------------------------------
[2025-11-21 21:47:34] 2025-11-21 20:35:35,951 | INFO     | 
[2025-11-21 21:47:34] 2025-11-21 20:35:35,951 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/1
[2025-11-21 21:47:34] 2025-11-21 20:35:35,973 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 21:47:34] 2025-11-21 20:35:35,974 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 21:47:34] 2025-11-21 20:35:35,974 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 21:47:34] 2025-11-21 20:35:35,974 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 21:47:34] 2025-11-21 20:35:35,974 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 21:47:34] 2025-11-21 20:35:35,974 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 21:47:34] 2025-11-21 20:35:35,974 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 21:47:34] 2025-11-21 20:35:35,974 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 21:47:34] 2025-11-21 20:35:35,974 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 21:47:34] 2025-11-21 20:35:35,974 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 21:47:34] 2025-11-21 20:35:35,974 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 21:47:34] 2025-11-21 20:35:35,975 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 21:47:34] 2025-11-21 20:35:35,975 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 21:47:34] 2025-11-21 20:35:35,975 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 21:47:34] 2025-11-21 20:35:35,975 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 21:47:34] 2025-11-21 20:35:35,975 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 21:47:34] 2025-11-21 20:35:35,975 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 21:47:34] 2025-11-21 20:35:35,975 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 21:47:34] 2025-11-21 20:35:35,975 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 21:47:34] 2025-11-21 20:35:35,975 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 21:47:34] 2025-11-21 20:35:35,976 | INFO     | job 6893840241 has completed (purged errors)
[2025-11-21 21:47:34] 2025-11-21 20:35:35,976 | INFO     | overall cleanup function is called
[2025-11-21 21:47:34] 2025-11-21 20:35:36,989 | INFO     | --- collectZombieJob: --- 10, [1827002]
[2025-11-21 21:47:34] 2025-11-21 20:35:36,990 | INFO     | zombie collector waiting for pid 1827002
[2025-11-21 21:47:34] 2025-11-21 20:35:36,990 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 21:47:34] 2025-11-21 20:35:36,990 | INFO     | collected zombie processes
[2025-11-21 21:47:34] 2025-11-21 20:35:36,990 | INFO     | will attempt to kill all subprocesses of pid=1827002
[2025-11-21 21:47:34] 2025-11-21 20:35:37,423 | INFO     | process IDs to be killed: [1827002] (in reverse order)
[2025-11-21 21:47:34] 2025-11-21 20:35:37,544 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 21:47:34] 2025-11-21 20:35:37,544 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 21:47:34] 2025-11-21 20:35:37,558 | INFO     | did not find any defunct processes belonging to 1827002
[2025-11-21 21:47:34] 2025-11-21 20:35:37,573 | INFO     | did not find any defunct processes belonging to 1827002
[2025-11-21 21:47:34] 2025-11-21 20:35:37,575 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 21:47:34] 2025-11-21 20:35:37,575 | INFO     | ready for new job
[2025-11-21 21:47:34] 2025-11-21 20:35:37,575 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 21:47:34] 2025-11-21 20:35:37,582 | INFO     | ***************************************
[2025-11-21 21:47:34] 2025-11-21 20:35:37,582 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 21:47:34] 2025-11-21 20:35:37,582 | INFO     | ***************************************
[2025-11-21 21:47:34] 2025-11-21 20:35:37,582 | INFO     | 
[2025-11-21 21:47:34] 2025-11-21 20:35:37,587 | INFO     | architecture information:
[2025-11-21 21:47:34] 2025-11-21 20:35:37,587 | INFO     | executing command: cat /etc/os-release
[2025-11-21 21:47:34] 2025-11-21 20:35:37,606 | INFO     | cat /etc/os-release:
[2025-11-21 21:47:34] NAME="CentOS Linux"
[2025-11-21 21:47:34] VERSION="7 (Core)"
[2025-11-21 21:47:34] ID="centos"
[2025-11-21 21:47:34] ID_LIKE="rhel fedora"
[2025-11-21 21:47:34] VERSION_ID="7"
[2025-11-21 21:47:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 21:47:34] ANSI_COLOR="0;31"
[2025-11-21 21:47:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 21:47:34] HOME_URL="https://www.centos.org/"
[2025-11-21 21:47:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 21:47:34] 
[2025-11-21 21:47:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 21:47:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 21:47:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 21:47:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 21:47:34] 
[2025-11-21 21:47:34] 2025-11-21 20:35:37,606 | INFO     | ***************************************
[2025-11-21 21:47:34] 2025-11-21 20:35:38,109 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/1
[2025-11-21 21:47:34] 2025-11-21 20:35:38,126 | INFO     | sufficient remaining disk space (668272164864 B)
[2025-11-21 21:47:34] 2025-11-21 20:35:38,126 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 21:47:34] 2025-11-21 20:35:38,126 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 21:47:34] 2025-11-21 20:35:38,126 | INFO     | update_server=False
[2025-11-21 21:47:34] 2025-11-21 20:35:38,126 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 21:47:34] 2025-11-21 20:35:38,127 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 21:47:34] 2025-11-21 20:35:38,127 | INFO     | aborting loop
[2025-11-21 21:47:34] 2025-11-21 20:35:38,271 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 21:47:34] 2025-11-21 20:35:38,983 | INFO     | all data control threads have been joined
[2025-11-21 21:47:34] 2025-11-21 20:35:39,132 | INFO     | [job] retrieve thread has finished
[2025-11-21 21:47:34] 2025-11-21 20:35:39,132 | INFO     | [job] job monitor thread has finished
[2025-11-21 21:47:34] 2025-11-21 20:35:39,284 | INFO     | all payload control threads have been joined
[2025-11-21 21:47:34] 2025-11-21 20:35:39,290 | INFO     | all job control threads have been joined
[2025-11-21 21:47:34] 2025-11-21 20:35:39,368 | INFO     | [data] copytool_in thread has finished
[2025-11-21 21:47:34] 2025-11-21 20:35:39,427 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 21:47:34] 2025-11-21 20:35:39,440 | INFO     | [payload] failed_post thread has finished
[2025-11-21 21:47:34] 2025-11-21 20:35:39,550 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 21:47:34] 2025-11-21 20:35:39,692 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 21:47:34] 2025-11-21 20:35:39,772 | INFO     | [payload] validate_post thread has finished
[2025-11-21 21:47:34] 2025-11-21 20:35:39,990 | INFO     | [data] control thread has finished
[2025-11-21 21:47:34] 2025-11-21 20:35:40,276 | INFO     | [data] copytool_out thread has finished
[2025-11-21 21:47:34] 2025-11-21 20:35:40,290 | INFO     | [payload] control thread has finished
[2025-11-21 21:47:34] 2025-11-21 20:35:40,296 | INFO     | [job] control thread has finished
[2025-11-21 21:47:34] 2025-11-21 20:35:40,487 | INFO     | [job] validate thread has finished
[2025-11-21 21:47:34] 2025-11-21 20:35:40,503 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 21:47:34] 2025-11-21 20:35:40,521 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 21:47:34] 2025-11-21 20:35:40,861 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 21:47:34] 2025-11-21 20:35:41,526 | INFO     | [job] queue monitor thread has finished
[2025-11-21 21:47:34] 2025-11-21 20:35:44,867 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 21:47:34] 2025-11-21 20:36:09,444 | INFO     | PID=1819882 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 21:47:34] 2025-11-21 20:36:09,445 | INFO     | .. there are 4 such processes running
[2025-11-21 21:47:34] 2025-11-21 20:36:09,445 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 21:47:34] 2025-11-21 20:36:09,446 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 21:47:34] 2025-11-21 20:36:09,446 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 21:47:34] 2025-11-21 20:36:14,854 | INFO     | [monitor] cgroup control has ended
[2025-11-21 21:47:34] 2025-11-21 20:36:16,144 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22386943121216)>', '<ExcThread(monitor, started 22386497787648)>']
[2025-11-21 21:47:34] 2025-11-21 20:36:16,480 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 21:47:34] 2025-11-21 20:36:16,482 | INFO     | [monitor] control thread has ended
[2025-11-21 21:47:34] 2025-11-21 20:36:21,169 | INFO     | all workflow threads have been joined
[2025-11-21 21:47:34] 2025-11-21 20:36:21,169 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 21:47:34] 2025-11-21 20:36:21,170 | INFO     | traces error code: 0
[2025-11-21 21:47:34] 2025-11-21 20:36:21,170 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 21:47:34] 2025-11-21 20:36:21,366 [wrapper] ==== pilot stdout END ====
[2025-11-21 21:47:34] 2025-11-21 20:36:21,369 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 21:47:34] 2025-11-21 20:36:21,371 [wrapper] pilotpid: 1819882
[2025-11-21 21:47:34] 2025-11-21 20:36:21,373 [wrapper] Pilot exit status: 0
[2025-11-21 21:47:34] 2025-11-21 20:36:21,384 [wrapper] pandaids: 6893840241
[2025-11-21 21:47:34] 2025-11-21 20:36:21,467 [wrapper] cleanup supervisor_pilot 2930551 1819883
[2025-11-21 21:47:34] 2025-11-21 20:36:21,470 [wrapper] Test setup, not cleaning
[2025-11-21 21:47:34] 2025-11-21 20:36:21,473 [wrapper] apfmon messages muted
[2025-11-21 21:47:34] 2025-11-21 20:36:21,475 [wrapper] ==== wrapper stdout END ====
[2025-11-21 21:47:34] 2025-11-21 20:36:21,478 [wrapper] ==== wrapper stderr END ====
[2025-11-21 21:47:34]  *** Error codes and diagnostics ***
[2025-11-21 21:47:34]     "exeErrorCode": 0,
[2025-11-21 21:47:34]     "exeErrorDiag": "",
[2025-11-21 21:47:34]     "pilotErrorCode": 0,
[2025-11-21 21:47:34]     "pilotErrorDiag": "",
[2025-11-21 21:47:34]  *** Listing of results directory ***
[2025-11-21 21:47:34] total 1330856
[2025-11-21 21:47:34] -rw-r--r-- 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-21 21:47:34] -rwx------ 1 boinc boinc     36292 Nov 20 11:20 runpilot2-wrapper.sh
[2025-11-21 21:47:34] -rw-r--r-- 1 boinc boinc      5112 Nov 20 11:21 queuedata.json
[2025-11-21 21:47:34] -rw-r--r-- 1 boinc boinc       100 Nov 20 21:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 21:47:34] -rwxr-xr-x 1 boinc boinc      7986 Nov 20 21:05 run_atlas
[2025-11-21 21:47:34] -rw-r--r-- 1 boinc boinc       105 Nov 20 21:05 job.xml
[2025-11-21 21:47:34] -rw------- 2 boinc boinc   4128768 Nov 20 21:06 copy_hOoki0
[2025-11-21 21:47:34] -rw-r--r-- 2 boinc boinc 409127435 Nov 21 01:11 EVNT.47493127._000169.pool.root.1
[2025-11-21 21:47:34] -rw-r--r-- 2 boinc boinc     15847 Nov 21 01:11 start_atlas.sh
[2025-11-21 21:47:34] drwxrwx--x 2 boinc boinc      4096 Nov 21 01:11 shared
[2025-11-21 21:47:34] -rw-r--r-- 2 boinc boinc    590103 Nov 21 01:11 input.tar.gz
[2025-11-21 21:47:34] -rw-r--r-- 1 boinc boinc         0 Nov 21 01:11 boinc_lockfile
[2025-11-21 21:47:34] -rw-r--r-- 1 boinc boinc      2786 Nov 21 01:11 pandaJob.out
[2025-11-21 21:47:34] -rw------- 1 boinc boinc    989817 Nov 21 01:12 agis_schedconf.cvmfs.json
[2025-11-21 21:47:34] drwx------ 5 boinc boinc      4096 Nov 21 01:12 pilot3
[2025-11-21 21:47:34] -rw-r--r-- 1 boinc boinc      6639 Nov 21 01:58 init_data.xml
[2025-11-21 21:47:34] -rw-r--r-- 1 boinc boinc       531 Nov 21 21:29 boinc_task_state.xml
[2025-11-21 21:47:34] -rw------- 1 boinc boinc 921660347 Nov 21 21:34 HITS.47523449._001687.pool.root.1
[2025-11-21 21:47:34] -rw------- 1 boinc boinc      1049 Nov 21 21:35 memory_monitor_summary.json
[2025-11-21 21:47:34] -rw------- 1 boinc boinc   1526164 Nov 21 21:35 agis_ddmendpoints.agis.ALL.json
[2025-11-21 21:47:34] -rw------- 1 boinc boinc   1884017 Nov 21 21:35 log.47523449._001687.job.log.tgz.1
[2025-11-21 21:47:34] -rw------- 1 boinc boinc      8636 Nov 21 21:35 heartbeat.json
[2025-11-21 21:47:34] -rw------- 1 boinc boinc        95 Nov 21 21:36 pilot_heartbeat.json
[2025-11-21 21:47:34] -rw------- 1 boinc boinc      4833 Nov 21 21:36 pilotlog.txt
[2025-11-21 21:47:34] -rw------- 1 boinc boinc  10096204 Nov 21 21:36 log.47523449._001687.job.log.1
[2025-11-21 21:47:34] -rw------- 1 boinc boinc       353 Nov 21 21:36 output.list
[2025-11-21 21:47:34] -rw-r--r-- 1 boinc boinc       620 Nov 21 21:36 runtime_log
[2025-11-21 21:47:34] -rw------- 1 boinc boinc  12001280 Nov 21 21:36 result.tar.gz
[2025-11-21 21:47:34] -rw-r--r-- 1 boinc boinc      9206 Nov 21 21:36 runtime_log.err
[2025-11-21 21:47:34] -rw------- 1 boinc boinc       670 Nov 21 21:36 7p9NDmrwGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzMHKDmypy3Gn.diag
[2025-11-21 21:47:34] -rw-r--r-- 1 boinc boinc        27 Nov 21 21:47 wrapper_checkpoint.txt
[2025-11-21 21:47:34] -rw-r--r-- 1 boinc boinc      8192 Nov 21 21:47 boinc_mmap_file
[2025-11-21 21:47:34] -rw-r--r-- 1 boinc boinc     21111 Nov 21 21:47 stderr.txt
[2025-11-21 21:47:34] HITS file was successfully produced:
[2025-11-21 21:47:34] -rw------- 1 boinc boinc 921660347 Nov 21 21:34 shared/HITS.pool.root.1
[2025-11-21 21:47:34]  *** Contents of shared directory: ***
[2025-11-21 21:47:34] total 1315956
[2025-11-21 21:47:34] -rw------- 2 boinc boinc   4128768 Nov 20 21:06 copy_hOoki0
[2025-11-21 21:47:34] -rw-r--r-- 2 boinc boinc 409127435 Nov 21 01:11 ATLAS.root_0
[2025-11-21 21:47:34] -rw-r--r-- 2 boinc boinc     15847 Nov 21 01:11 start_atlas.sh
[2025-11-21 21:47:34] -rw-r--r-- 2 boinc boinc    590103 Nov 21 01:11 input.tar.gz
[2025-11-21 21:47:34] -rw------- 1 boinc boinc 921660347 Nov 21 21:34 HITS.pool.root.1
[2025-11-21 21:47:34] -rw------- 1 boinc boinc  12001280 Nov 21 21:36 result.tar.gz
21:47:36 (1815842): run_atlas exited; CPU time 275401.750536
21:47:36 (1815842): called boinc_finish(0)

</stderr_txt>
]]>

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