Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:22:23 (32610): wrapper (7.7.26015): starting
14:22:23 (32610): wrapper: running run_atlas (--nthreads 12)
[2025-11-20 14:22:23] Arguments: --nthreads 12
[2025-11-20 14:22:23] Threads: 12
[2025-11-20 14:22:23] Checking for CVMFS
[2025-11-20 14:22:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 14:22:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 14:22:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 14:22:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 14:22:23] 2.11.2.0 2925 279456 93576 153094 2 80 18951583 20275200 1 130560 1 125149254 99.975 15484864 13633 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 14:22:23] CVMFS is ok
[2025-11-20 14:22:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 14:22:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 14:22:23] Further information can be found at the LHC@home message board.
[2025-11-20 14:22:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 14:22:23] Checking for apptainer binary...
[2025-11-20 14:22:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 14:22:23] Running /usr/bin/apptainer --version
[2025-11-20 14:22:23] apptainer version 1.3.2-1.el7
[2025-11-20 14:22:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 14:22:25] c-205-10.aglt2.org
[2025-11-20 14:22:25] apptainer works
[2025-11-20 14:22:25] Set ATHENA_PROC_NUMBER=12
[2025-11-20 14:22:25] Set ATHENA_CORE_NUMBER=12
[2025-11-20 14:22:25] Starting ATLAS job with PandaID=6893852491
[2025-11-20 14:22:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 23:53:36]  *** The last 200 lines of the pilot log: ***
[2025-11-20 23:53:36] 2025-11-21 04:52:41,851 | INFO     | time since job start (34201s) is within the limit (172800.0s)
[2025-11-20 23:53:36] 2025-11-21 04:52:43,256 | INFO     | monitor loop #2571: job 0:6893852491 is in state 'finished'
[2025-11-20 23:53:36] 2025-11-21 04:52:43,256 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 23:53:36] 2025-11-21 04:52:43,857 | INFO     | time since job start (34203s) is within the limit (172800.0s)
[2025-11-20 23:53:36] 2025-11-21 04:52:44,929 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-20 23:53:36] 2025-11-21 04:52:44,933 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-20 23:53:36] 2025-11-21 04:52:44,936 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893852491/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 23:53:36] 2025-11-21 04:52:44,937 | INFO     | extracted standard info from prmon json
[2025-11-20 23:53:36] 2025-11-21 04:52:44,937 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 23:53:36] 2025-11-21 04:52:44,937 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 23:53:36] 2025-11-21 04:52:44,945 | INFO     | fitting pss+swap vs Time
[2025-11-20 23:53:36] 2025-11-21 04:52:44,946 | INFO     | sum of square deviations: 54455377471.93577
[2025-11-20 23:53:36] 2025-11-21 04:52:44,952 | INFO     | sum of deviations: 650638956680.629
[2025-11-20 23:53:36] 2025-11-21 04:52:44,952 | INFO     | mean x: 1763683639.5107143
[2025-11-20 23:53:36] 2025-11-21 04:52:44,953 | INFO     | mean y: 3445831.2285714285
[2025-11-20 23:53:36] 2025-11-21 04:52:44,953 | INFO     | intersect: -21069244073.77364
[2025-11-20 23:53:36] 2025-11-21 04:52:44,953 | INFO     | chi2: 5.338109924778061
[2025-11-20 23:53:36] 2025-11-21 04:52:44,954 | INFO     | sum of square deviations: 53009733591.93542
[2025-11-20 23:53:36] 2025-11-21 04:52:44,960 | INFO     | sum of deviations: 841052864404.8816
[2025-11-20 23:53:36] 2025-11-21 04:52:44,960 | INFO     | mean x: 1763683487.0108109
[2025-11-20 23:53:36] 2025-11-21 04:52:44,960 | INFO     | mean y: 3465901.3531531533
[2025-11-20 23:53:36] 2025-11-21 04:52:44,960 | INFO     | intersect: -27979150651.160522
[2025-11-20 23:53:36] 2025-11-21 04:52:44,961 | INFO     | chi2: 2.9696307529257595
[2025-11-20 23:53:36] 2025-11-21 04:52:44,961 | INFO     | current chi2=2.9696307529257595 (change=44.36924689127255 %)
[2025-11-20 23:53:36] 2025-11-21 04:52:44,962 | INFO     | sum of square deviations: 51589904149.43421
[2025-11-20 23:53:36] 2025-11-21 04:52:44,968 | INFO     | sum of deviations: 923908730919.3873
[2025-11-20 23:53:36] 2025-11-21 04:52:44,968 | INFO     | mean x: 1763683334.510909
[2025-11-20 23:53:36] 2025-11-21 04:52:44,968 | INFO     | mean y: 3474780.101818182
[2025-11-20 23:53:36] 2025-11-21 04:52:44,969 | INFO     | intersect: -31581821959.580494
[2025-11-20 23:53:36] 2025-11-21 04:52:44,969 | INFO     | chi2: 2.338848384029969
[2025-11-20 23:53:36] 2025-11-21 04:52:44,969 | INFO     | current chi2=2.338848384029969 (change=21.24110441253771 %)
[2025-11-20 23:53:36] 2025-11-21 04:52:44,969 | INFO     | right removable region: 549
[2025-11-20 23:53:36] 2025-11-21 04:52:44,970 | INFO     | sum of square deviations: 53009729931.93542
[2025-11-20 23:53:36] 2025-11-21 04:52:44,976 | INFO     | sum of deviations: 478005277929.854
[2025-11-20 23:53:36] 2025-11-21 04:52:44,976 | INFO     | mean x: 1763683792.0108109
[2025-11-20 23:53:36] 2025-11-21 04:52:44,976 | INFO     | mean y: 3463992.8576576575
[2025-11-20 23:53:36] 2025-11-21 04:52:44,977 | INFO     | intersect: -15900223165.38639
[2025-11-20 23:53:36] 2025-11-21 04:52:44,977 | INFO     | chi2: 3.179933734010038
[2025-11-20 23:53:36] 2025-11-21 04:52:44,977 | INFO     | current chi2=3.179933734010038 (change=40.429594391646994 %)
[2025-11-20 23:53:36] 2025-11-21 04:52:44,978 | INFO     | sum of square deviations: 51589896829.43421
[2025-11-20 23:53:36] 2025-11-21 04:52:44,984 | INFO     | sum of deviations: 428459057842.1749
[2025-11-20 23:53:36] 2025-11-21 04:52:44,984 | INFO     | mean x: 1763683944.510909
[2025-11-20 23:53:36] 2025-11-21 04:52:44,984 | INFO     | mean y: 3469311.9709090907
[2025-11-20 23:53:36] 2025-11-21 04:52:44,984 | INFO     | intersect: -14644095572.581743
[2025-11-20 23:53:36] 2025-11-21 04:52:44,985 | INFO     | chi2: 3.104014352615198
[2025-11-20 23:53:36] 2025-11-21 04:52:44,985 | INFO     | current chi2=3.104014352615198 (change=2.3874516812368376 %)
[2025-11-20 23:53:36] 2025-11-21 04:52:44,985 | INFO     | left removable region: 20
[2025-11-20 23:53:36] 2025-11-21 04:52:44,986 | INFO     | sum of square deviations: 45903251037.931946
[2025-11-20 23:53:36] 2025-11-21 04:52:44,991 | INFO     | sum of deviations: 634095557457.7789
[2025-11-20 23:53:36] 2025-11-21 04:52:44,991 | INFO     | mean x: 1763683914.011342
[2025-11-20 23:53:36] 2025-11-21 04:52:44,991 | INFO     | mean y: 3506210.5368620036
[2025-11-20 23:53:36] 2025-11-21 04:52:44,992 | INFO     | intersect: -24359564146.074715
[2025-11-20 23:53:36] 2025-11-21 04:52:44,992 | INFO     | chi2: 0.05842381667951459
[2025-11-20 23:53:36] 2025-11-21 04:52:44,992 | INFO     | current memory leak: 13.81 B/s (using 529 data points, chi2=0.06)
[2025-11-20 23:53:36] 2025-11-21 04:52:44,993 | INFO     | could have reported an average CPU frequency of 2454 MHz (22 samples)
[2025-11-20 23:53:36] 2025-11-21 04:52:44,993 | INFO     | ..............................
[2025-11-20 23:53:36] 2025-11-21 04:52:44,993 | INFO     | . Timing measurements:
[2025-11-20 23:53:36] 2025-11-21 04:52:44,993 | INFO     | . get job = 0 s
[2025-11-20 23:53:36] 2025-11-21 04:52:44,993 | INFO     | . initial setup = 2 s
[2025-11-20 23:53:36] 2025-11-21 04:52:44,993 | INFO     | . payload setup = 7 s
[2025-11-20 23:53:36] 2025-11-21 04:52:44,993 | INFO     | . stage-in = 0 s
[2025-11-20 23:53:36] 2025-11-21 04:52:44,993 | INFO     | . payload execution = 34162 s
[2025-11-20 23:53:36] 2025-11-21 04:52:44,994 | INFO     | . stage-out = 3 s
[2025-11-20 23:53:36] 2025-11-21 04:52:44,994 | INFO     | . log creation = 0 s
[2025-11-20 23:53:36] 2025-11-21 04:52:44,994 | INFO     | ..............................
[2025-11-20 23:53:36] 2025-11-21 04:52:45,401 | INFO     | 
[2025-11-20 23:53:36] 2025-11-21 04:52:45,401 | INFO     | job summary report
[2025-11-20 23:53:36] 2025-11-21 04:52:45,401 | INFO     | --------------------------------------------------
[2025-11-20 23:53:36] 2025-11-21 04:52:45,401 | INFO     | PanDA job id: 6893852491
[2025-11-20 23:53:36] 2025-11-21 04:52:45,401 | INFO     | task id: 47523449
[2025-11-20 23:53:36] 2025-11-21 04:52:45,401 | INFO     | errors: (none)
[2025-11-20 23:53:36] 2025-11-21 04:52:45,402 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 23:53:36] 2025-11-21 04:52:45,402 | INFO     | pilot state: finished 
[2025-11-20 23:53:36] 2025-11-21 04:52:45,402 | INFO     | transexitcode: 0
[2025-11-20 23:53:36] 2025-11-21 04:52:45,402 | INFO     | exeerrorcode: 0
[2025-11-20 23:53:36] 2025-11-21 04:52:45,402 | INFO     | exeerrordiag: 
[2025-11-20 23:53:36] 2025-11-21 04:52:45,402 | INFO     | exitcode: 0
[2025-11-20 23:53:36] 2025-11-21 04:52:45,403 | INFO     | exitmsg: OK
[2025-11-20 23:53:36] 2025-11-21 04:52:45,403 | INFO     | cpuconsumptiontime: 327613 s
[2025-11-20 23:53:36] 2025-11-21 04:52:45,403 | INFO     | nevents: 1000
[2025-11-20 23:53:36] 2025-11-21 04:52:45,403 | INFO     | neventsw: 0
[2025-11-20 23:53:36] 2025-11-21 04:52:45,403 | INFO     | pid: 11342
[2025-11-20 23:53:36] 2025-11-21 04:52:45,403 | INFO     | pgrp: 11342
[2025-11-20 23:53:36] 2025-11-21 04:52:45,403 | INFO     | corecount: 12
[2025-11-20 23:53:36] 2025-11-21 04:52:45,404 | INFO     | event service: False
[2025-11-20 23:53:36] 2025-11-21 04:52:45,404 | INFO     | sizes: {0: 2298807, 5: 2299069, 11: 2299125, 34174: 2340285, 34177: 2349279, 34181: 2349335, 34188: 2349709}
[2025-11-20 23:53:36] 2025-11-21 04:52:45,404 | INFO     | --------------------------------------------------
[2025-11-20 23:53:36] 2025-11-21 04:52:45,404 | INFO     | 
[2025-11-20 23:53:36] 2025-11-21 04:52:45,404 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-20 23:53:36] 2025-11-21 04:52:45,526 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 23:53:36] 2025-11-21 04:52:45,527 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 23:53:36] 2025-11-21 04:52:45,527 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 23:53:36] 2025-11-21 04:52:45,527 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 23:53:36] 2025-11-21 04:52:45,527 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 23:53:36] 2025-11-21 04:52:45,527 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 23:53:36] 2025-11-21 04:52:45,527 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 23:53:36] 2025-11-21 04:52:45,528 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 23:53:36] 2025-11-21 04:52:45,528 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 23:53:36] 2025-11-21 04:52:45,528 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 23:53:36] 2025-11-21 04:52:45,528 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 23:53:36] 2025-11-21 04:52:45,528 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 23:53:36] 2025-11-21 04:52:45,528 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 23:53:36] 2025-11-21 04:52:45,529 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 23:53:36] 2025-11-21 04:52:45,529 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 23:53:36] 2025-11-21 04:52:45,529 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 23:53:36] 2025-11-21 04:52:45,529 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 23:53:36] 2025-11-21 04:52:45,529 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 23:53:36] 2025-11-21 04:52:45,529 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 23:53:36] 2025-11-21 04:52:45,530 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 23:53:36] 2025-11-21 04:52:45,530 | INFO     | job 6893852491 has completed (purged errors)
[2025-11-20 23:53:36] 2025-11-21 04:52:45,530 | INFO     | overall cleanup function is called
[2025-11-20 23:53:36] 2025-11-21 04:52:46,547 | INFO     | --- collectZombieJob: --- 10, [11342]
[2025-11-20 23:53:36] 2025-11-21 04:52:46,547 | INFO     | zombie collector waiting for pid 11342
[2025-11-20 23:53:36] 2025-11-21 04:52:46,547 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 23:53:36] 2025-11-21 04:52:46,548 | INFO     | collected zombie processes
[2025-11-20 23:53:36] 2025-11-21 04:52:46,548 | INFO     | will attempt to kill all subprocesses of pid=11342
[2025-11-20 23:53:36] 2025-11-21 04:52:46,647 | INFO     | process IDs to be killed: [11342] (in reverse order)
[2025-11-20 23:53:36] 2025-11-21 04:52:46,703 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 23:53:36] 2025-11-21 04:52:46,703 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 23:53:36] 2025-11-21 04:52:46,707 | INFO     | did not find any defunct processes belonging to 11342
[2025-11-20 23:53:36] 2025-11-21 04:52:46,710 | INFO     | did not find any defunct processes belonging to 11342
[2025-11-20 23:53:36] 2025-11-21 04:52:46,712 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 23:53:36] 2025-11-21 04:52:46,712 | INFO     | ready for new job
[2025-11-20 23:53:36] 2025-11-21 04:52:46,713 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 23:53:36] 2025-11-21 04:52:46,715 | INFO     | ***************************************
[2025-11-20 23:53:36] 2025-11-21 04:52:46,716 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 23:53:36] 2025-11-21 04:52:46,716 | INFO     | ***************************************
[2025-11-20 23:53:36] 2025-11-21 04:52:46,716 | INFO     | 
[2025-11-20 23:53:36] 2025-11-21 04:52:46,717 | INFO     | architecture information:
[2025-11-20 23:53:36] 2025-11-21 04:52:46,717 | INFO     | executing command: cat /etc/os-release
[2025-11-20 23:53:36] 2025-11-21 04:52:46,732 | INFO     | cat /etc/os-release:
[2025-11-20 23:53:36] NAME="CentOS Linux"
[2025-11-20 23:53:36] VERSION="7 (Core)"
[2025-11-20 23:53:36] ID="centos"
[2025-11-20 23:53:36] ID_LIKE="rhel fedora"
[2025-11-20 23:53:36] VERSION_ID="7"
[2025-11-20 23:53:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 23:53:36] ANSI_COLOR="0;31"
[2025-11-20 23:53:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 23:53:36] HOME_URL="https://www.centos.org/"
[2025-11-20 23:53:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 23:53:36] 
[2025-11-20 23:53:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 23:53:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 23:53:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 23:53:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 23:53:36] 
[2025-11-20 23:53:36] 2025-11-21 04:52:46,733 | INFO     | ***************************************
[2025-11-20 23:53:36] 2025-11-21 04:52:47,236 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-20 23:53:36] 2025-11-21 04:52:47,253 | INFO     | sufficient remaining disk space (27828158464 B)
[2025-11-20 23:53:36] 2025-11-21 04:52:47,253 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 23:53:36] 2025-11-21 04:52:47,254 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 23:53:36] 2025-11-21 04:52:47,254 | INFO     | update_server=False
[2025-11-20 23:53:36] 2025-11-21 04:52:47,254 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 23:53:36] 2025-11-21 04:52:47,254 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 23:53:36] 2025-11-21 04:52:47,255 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 23:53:36] 2025-11-21 04:52:47,255 | INFO     | aborting loop
[2025-11-20 23:53:36] 2025-11-21 04:52:47,368 | INFO     | all job control threads have been joined
[2025-11-20 23:53:36] 2025-11-21 04:52:48,076 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 23:53:36] 2025-11-21 04:52:48,124 | INFO     | all data control threads have been joined
[2025-11-20 23:53:36] 2025-11-21 04:52:48,259 | INFO     | [job] retrieve thread has finished
[2025-11-20 23:53:36] 2025-11-21 04:52:48,261 | INFO     | [job] job monitor thread has finished
[2025-11-20 23:53:36] 2025-11-21 04:52:48,365 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 23:53:36] 2025-11-21 04:52:48,374 | INFO     | [job] control thread has finished
[2025-11-20 23:53:36] 2025-11-21 04:52:48,467 | INFO     | all payload control threads have been joined
[2025-11-20 23:53:36] 2025-11-21 04:52:48,481 | INFO     | [payload] failed_post thread has finished
[2025-11-20 23:53:36] 2025-11-21 04:52:48,626 | INFO     | [data] copytool_in thread has finished
[2025-11-20 23:53:36] 2025-11-21 04:52:48,975 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 23:53:36] 2025-11-21 04:52:49,129 | INFO     | [data] control thread has finished
[2025-11-20 23:53:36] 2025-11-21 04:52:49,249 | INFO     | [payload] validate_post thread has finished
[2025-11-20 23:53:36] 2025-11-21 04:52:49,260 | INFO     | [data] copytool_out thread has finished
[2025-11-20 23:53:36] 2025-11-21 04:52:49,355 | INFO     | [job] validate thread has finished
[2025-11-20 23:53:36] 2025-11-21 04:52:49,472 | INFO     | [payload] control thread has finished
[2025-11-20 23:53:36] 2025-11-21 04:52:49,547 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 23:53:36] 2025-11-21 04:52:49,731 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 23:53:36] 2025-11-21 04:52:50,089 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 23:53:36] 2025-11-21 04:52:51,094 | INFO     | [job] queue monitor thread has finished
[2025-11-20 23:53:36] 2025-11-21 04:52:52,082 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 23:53:36] 2025-11-21 04:53:17,063 | INFO     | PID=4230 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-20 23:53:36] 2025-11-21 04:53:17,063 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 23:53:36] 2025-11-21 04:53:17,064 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 23:53:36] 2025-11-21 04:53:17,064 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 23:53:36] 2025-11-21 04:53:30,848 | INFO     | [monitor] cgroup control has ended
[2025-11-20 23:53:36] 2025-11-21 04:53:31,517 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140064738957120)>', '<ExcThread(monitor, started 140064151549696)>']
[2025-11-20 23:53:36] 2025-11-21 04:53:32,140 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 23:53:36] 2025-11-21 04:53:32,140 | INFO     | [monitor] control thread has ended
[2025-11-20 23:53:36] 2025-11-21 04:53:36,543 | INFO     | all workflow threads have been joined
[2025-11-20 23:53:36] 2025-11-21 04:53:36,543 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 23:53:36] 2025-11-21 04:53:36,543 | INFO     | traces error code: 0
[2025-11-20 23:53:36] 2025-11-21 04:53:36,544 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 23:53:36] 2025-11-21 04:53:36,636 [wrapper] ==== pilot stdout END ====
[2025-11-20 23:53:36] 2025-11-21 04:53:36,640 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 23:53:36] 2025-11-21 04:53:36,644 [wrapper] pilotpid: 4230
[2025-11-20 23:53:36] 2025-11-21 04:53:36,648 [wrapper] Pilot exit status: 0
[2025-11-20 23:53:36] 2025-11-21 04:53:36,663 [wrapper] pandaids: 6893852491
[2025-11-20 23:53:36] 2025-11-21 04:53:36,707 [wrapper] cleanup supervisor_pilot  8554 4231
[2025-11-20 23:53:36] 2025-11-21 04:53:36,711 [wrapper] Test setup, not cleaning
[2025-11-20 23:53:36] 2025-11-21 04:53:36,716 [wrapper] apfmon messages muted
[2025-11-20 23:53:36] 2025-11-21 04:53:36,720 [wrapper] ==== wrapper stdout END ====
[2025-11-20 23:53:36] 2025-11-21 04:53:36,724 [wrapper] ==== wrapper stderr END ====
[2025-11-20 23:53:36]  *** Error codes and diagnostics ***
[2025-11-20 23:53:36]     "exeErrorCode": 0,
[2025-11-20 23:53:36]     "exeErrorDiag": "",
[2025-11-20 23:53:36]     "pilotErrorCode": 0,
[2025-11-20 23:53:36]     "pilotErrorDiag": "",
[2025-11-20 23:53:36]  *** Listing of results directory ***
[2025-11-20 23:53:36] total 1325172
[2025-11-20 23:53:36] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 06:54 pilot3.tar.gz
[2025-11-20 23:53:36] -rwx------ 1 boincer umatlas     36292 Nov 20 07:01 runpilot2-wrapper.sh
[2025-11-20 23:53:36] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 07:01 queuedata.json
[2025-11-20 23:53:36] -rw-r--r-- 1 boincer umatlas       100 Nov 20 14:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 23:53:36] -rwxr-xr-x 1 boincer umatlas      7986 Nov 20 14:22 run_atlas
[2025-11-20 23:53:36] -rw-r--r-- 1 boincer umatlas       105 Nov 20 14:22 job.xml
[2025-11-20 23:53:36] -rw-r--r-- 2 boincer umatlas 411277383 Nov 20 14:22 EVNT.47493127._000387.pool.root.1
[2025-11-20 23:53:36] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 14:22 start_atlas.sh
[2025-11-20 23:53:36] drwxrwx--x 2 boincer umatlas      4096 Nov 20 14:22 shared
[2025-11-20 23:53:36] -rw-r--r-- 2 boincer umatlas    590103 Nov 20 14:22 input.tar.gz
[2025-11-20 23:53:36] -rw-r--r-- 1 boincer umatlas         0 Nov 20 14:22 boinc_lockfile
[2025-11-20 23:53:36] -rw-r--r-- 1 boincer umatlas      2786 Nov 20 14:22 pandaJob.out
[2025-11-20 23:53:36] -rw------- 1 boincer umatlas        57 Nov 20 14:22 setup.sh.local
[2025-11-20 23:53:36] -rw------- 1 boincer umatlas    989464 Nov 20 14:22 agis_schedconf.cvmfs.json
[2025-11-20 23:53:36] drwx------ 5 boincer umatlas      4096 Nov 20 14:22 pilot3
[2025-11-20 23:53:36] -rw-r--r-- 1 boincer umatlas       533 Nov 20 23:41 boinc_task_state.xml
[2025-11-20 23:53:36] -rw-r--r-- 1 boincer umatlas      5955 Nov 20 23:48 init_data.xml
[2025-11-20 23:53:36] -rw------- 1 boincer umatlas 927640289 Nov 20 23:51 HITS.47523449._003867.pool.root.1
[2025-11-20 23:53:36] -rw------- 1 boincer umatlas      1065 Nov 20 23:52 memory_monitor_summary.json
[2025-11-20 23:53:36] -rw------- 1 boincer umatlas   1526164 Nov 20 23:52 agis_ddmendpoints.agis.ALL.json
[2025-11-20 23:53:36] -rw------- 1 boincer umatlas   2289121 Nov 20 23:52 log.47523449._003867.job.log.tgz.1
[2025-11-20 23:53:36] -rw------- 1 boincer umatlas      8666 Nov 20 23:52 heartbeat.json
[2025-11-20 23:53:36] -rw------- 1 boincer umatlas        95 Nov 20 23:53 pilot_heartbeat.json
[2025-11-20 23:53:36] -rw-r--r-- 1 boincer umatlas        29 Nov 20 23:53 wrapper_checkpoint.txt
[2025-11-20 23:53:36] -rw-r--r-- 1 boincer umatlas      8192 Nov 20 23:53 boinc_mmap_file
[2025-11-20 23:53:36] -rw------- 1 boincer umatlas      4745 Nov 20 23:53 pilotlog.txt
[2025-11-20 23:53:36] -rw------- 1 boincer umatlas   4779161 Nov 20 23:53 log.47523449._003867.job.log.1
[2025-11-20 23:53:36] -rw------- 1 boincer umatlas       353 Nov 20 23:53 output.list
[2025-11-20 23:53:36] -rw-r--r-- 1 boincer umatlas       620 Nov 20 23:53 runtime_log
[2025-11-20 23:53:36] -rw------- 1 boincer umatlas   7086080 Nov 20 23:53 result.tar.gz
[2025-11-20 23:53:36] -rw-r--r-- 1 boincer umatlas      9345 Nov 20 23:53 runtime_log.err
[2025-11-20 23:53:36] -rw------- 1 boincer umatlas       670 Nov 20 23:53 GlELDmgWIg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7aGKDmqutjbm.diag
[2025-11-20 23:53:36] -rw-r--r-- 1 boincer umatlas     21305 Nov 20 23:53 stderr.txt
[2025-11-20 23:53:36] HITS file was successfully produced:
[2025-11-20 23:53:36] -rw------- 1 boincer umatlas 927640289 Nov 20 23:51 shared/HITS.pool.root.1
[2025-11-20 23:53:36]  *** Contents of shared directory: ***
[2025-11-20 23:53:36] total 1315064
[2025-11-20 23:53:36] -rw-r--r-- 2 boincer umatlas 411277383 Nov 20 14:22 ATLAS.root_0
[2025-11-20 23:53:36] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 14:22 start_atlas.sh
[2025-11-20 23:53:36] -rw-r--r-- 2 boincer umatlas    590103 Nov 20 14:22 input.tar.gz
[2025-11-20 23:53:36] -rw------- 1 boincer umatlas 927640289 Nov 20 23:51 HITS.pool.root.1
[2025-11-20 23:53:36] -rw------- 1 boincer umatlas   7086080 Nov 20 23:53 result.tar.gz
23:53:38 (32610): run_atlas exited; CPU time 315474.258166
23:53:38 (32610): called boinc_finish(0)

</stderr_txt>
]]>

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