Stderr output

<core_client_version>7.16.16</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-21 03:12:48 (41400): vboxwrapper version 26210
2025-11-21 03:12:48 (41400): BOINC client version: 7.16.16
2025-11-21 03:12:48 (41400): Detected: VirtualBox VboxManage Interface (Version: 7.0.12)
2025-11-21 03:12:48 (41400): Successfully copied 'init_data.xml' to the shared directory.
2025-11-21 03:12:49 (41400): Create VM. (boinc_6d55ef9a8a2704d0, slot#0)
2025-11-21 03:12:49 (41400): Setting Memory Size for VM. (4400MB)
2025-11-21 03:12:49 (41400): Setting CPU Count for VM. (4)
2025-11-21 03:12:49 (41400): Setting Chipset Options for VM.
2025-11-21 03:12:49 (41400): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-21 03:12:49 (41400): Setting Boot Options for VM.
2025-11-21 03:12:49 (41400): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-21 03:12:49 (41400): Enabling VM Network Access.
2025-11-21 03:12:49 (41400): Disabling USB Support for VM.
2025-11-21 03:12:49 (41400): Disabling COM Port Support for VM.
2025-11-21 03:12:49 (41400): Disabling LPT Port Support for VM.
2025-11-21 03:12:49 (41400): Disabling Audio Support for VM.
2025-11-21 03:12:49 (41400): Disabling Clipboard Support for VM.
2025-11-21 03:12:49 (41400): Disabling Drag and Drop Support for VM.
2025-11-21 03:12:50 (41400): Adding storage controller(s) to VM.
2025-11-21 03:12:50 (41400): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-21 03:12:50 (41400): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-21 03:12:50 (41400): forwarding host port 56235 to guest port 80
2025-11-21 03:12:50 (41400): Enabling remote desktop for VM.
2025-11-21 03:12:50 (41400): Enabling shared directory for VM.
2025-11-21 03:12:50 (41400): Starting VM using VBoxManage interface. (boinc_6d55ef9a8a2704d0, slot#0)
2025-11-21 03:12:52 (41400): Successfully started VM. (PID = '41885')
2025-11-21 03:12:52 (41400): Reporting VM Process ID to BOINC.
2025-11-21 03:12:52 (41400): Guest Log: BIOS: VirtualBox 7.0.12
2025-11-21 03:12:52 (41400): Guest Log: CPUID EDX: 0x178bfbff
2025-11-21 03:12:52 (41400): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-21 03:12:52 (41400): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-21 03:12:52 (41400): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-21 03:12:52 (41400): Detected: Web Application Enabled (http://localhost:56235)
2025-11-21 03:12:52 (41400): Detected: Remote Desktop Enabled (localhost:52739)
2025-11-21 03:12:52 (41400): Preference change detected
2025-11-21 03:12:52 (41400): Setting CPU throttle for VM. (100%)
2025-11-21 03:12:52 (41400): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-21 03:12:54 (41400): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-21 03:12:54 (41400): Guest Log: BIOS: Booting from Hard Disk...
2025-11-21 03:12:57 (41400): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-21 03:12:57 (41400): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-21 03:12:57 (41400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-21 03:13:02 (41400): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-21 03:13:02 (41400): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-21 03:13:08 (41400): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-21 03:13:08 (41400): Guest Log: 00:00:00.000130 main     Log opened 2025-11-21T09:13:06.521057000Z
2025-11-21 03:13:08 (41400): Guest Log: 00:00:00.000201 main     OS Product: Linux
2025-11-21 03:13:08 (41400): Guest Log: 00:00:00.000223 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-21 03:13:08 (41400): Guest Log: 00:00:00.000261 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-21 03:13:08 (41400): Guest Log: 00:00:00.000282 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-21 03:13:08 (41400): Guest Log: 00:00:00.000282 main     Process ID: 1297
2025-11-21 03:13:08 (41400): Guest Log: 00:00:00.000283 main     Package type: LINUX_64BITS_GENERIC
2025-11-21 03:13:08 (41400): Guest Log: 00:00:00.001390 main     5.2.32 r132073 started. Verbose level = 0
2025-11-21 03:13:08 (41400): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-21 03:13:08 (41400): Guest Log: [INFO] Mounting shared directory
2025-11-21 03:13:08 (41400): Guest Log: [INFO] Checking for init_data.xml
2025-11-21 03:13:11 (41400): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-21 03:13:11 (41400): Guest Log: [INFO] Detected branch: prod
2025-11-21 03:13:11 (41400): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-21 03:13:11 (41400): Guest Log: Copying input files
2025-11-21 03:13:12 (41400): Guest Log: Copied input files into RunAtlas.
2025-11-21 03:13:12 (41400): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-21 03:13:12 (41400): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-21 03:13:12 (41400): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-21 03:13:12 (41400): Guest Log: Further information can be found at the LHC@home message board.
2025-11-21 03:13:22 (41400): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-21 03:13:23 (41400): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-21 03:13:23 (41400): Guest Log: 2.6.3.0 1572 0 30140 153115 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-11-21 03:13:24 (41400): Guest Log: copied the webapp to /var/www
2025-11-21 03:13:24 (41400): Guest Log: ATHENA_PROC_NUMBER=4
2025-11-21 03:13:24 (41400): Guest Log: ATHENA_CORE_NUMBER=4
2025-11-21 03:13:24 (41400): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-21 03:13:24 (41400): Guest Log:  *** Starting ATLAS job. (PandaID=6893852871 taskID=47523449) ***
2025-11-21 04:52:03 (41400): Status Report: Elapsed Time: '6000.000000'
2025-11-21 04:52:03 (41400): Status Report: CPU Time: '22681.290000'
2025-11-21 06:31:15 (41400): Status Report: Elapsed Time: '12000.000000'
2025-11-21 06:31:15 (41400): Status Report: CPU Time: '46444.250000'
2025-11-21 08:10:27 (41400): Status Report: Elapsed Time: '18000.000000'
2025-11-21 08:10:27 (41400): Status Report: CPU Time: '70215.150000'
2025-11-21 09:49:39 (41400): Status Report: Elapsed Time: '24000.000000'
2025-11-21 09:49:39 (41400): Status Report: CPU Time: '93984.600000'
2025-11-21 11:28:51 (41400): Status Report: Elapsed Time: '30000.000000'
2025-11-21 11:28:51 (41400): Status Report: CPU Time: '117755.330000'
2025-11-21 12:53:52 (41400): Guest Log:  *** Job finished ***
2025-11-21 12:53:52 (41400): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-21 12:53:52 (41400): Guest Log: 2025-11-21 18:53:39,963 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-21 12:53:52 (41400): Guest Log: 2025-11-21 18:53:39,963 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-21 12:53:52 (41400): Guest Log: 2025-11-21 18:53:40,415 | INFO     | [monitor] cgroup control has ended
2025-11-21 12:53:52 (41400): Guest Log: 2025-11-21 18:53:40,943 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140229936834368)>', '<ExcThread(monitor, started 140229121922816)>']
2025-11-21 12:53:52 (41400): Guest Log: 2025-11-21 18:53:40,991 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-21 12:53:52 (41400): Guest Log: 2025-11-21 18:53:40,991 | INFO     | [monitor] control thread has ended
2025-11-21 12:53:52 (41400): Guest Log: 2025-11-21 18:53:45,959 | INFO     | all workflow threads have been joined
2025-11-21 12:53:52 (41400): Guest Log: 2025-11-21 18:53:45,959 | INFO     | end of generic workflow (traces error code: 0)
2025-11-21 12:53:52 (41400): Guest Log: 2025-11-21 18:53:45,960 | INFO     | traces error code: 0
2025-11-21 12:53:52 (41400): Guest Log: 2025-11-21 18:53:45,960 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-21 12:53:52 (41400): Guest Log: 2025-11-21 18:53:46,033 [wrapper] ==== pilot stdout END ====
2025-11-21 12:53:52 (41400): Guest Log: 2025-11-21 18:53:46,040 [wrapper] ==== wrapper stdout RESUME ====
2025-11-21 12:53:52 (41400): Guest Log: 2025-11-21 18:53:46,046 [wrapper] pilotpid: 5960
2025-11-21 12:53:52 (41400): Guest Log: 2025-11-21 18:53:46,051 [wrapper] Pilot exit status: 0
2025-11-21 12:53:52 (41400): Guest Log: 2025-11-21 18:53:46,066 [wrapper] pandaids: 6893852871
2025-11-21 12:53:52 (41400): Guest Log: 2025-11-21 18:53:46,095 [wrapper] cleanup supervisor_pilot 14019 5961
2025-11-21 12:53:52 (41400): Guest Log: 2025-11-21 18:53:46,098 [wrapper] Test setup, not cleaning
2025-11-21 12:53:52 (41400): Guest Log: 2025-11-21 18:53:46,103 [wrapper] apfmon messages muted
2025-11-21 12:53:52 (41400): Guest Log: 2025-11-21 18:53:46,107 [wrapper] ==== wrapper stdout END ====
2025-11-21 12:53:52 (41400): Guest Log: 2025-11-21 18:53:46,111 [wrapper] ==== wrapper stderr END ====
2025-11-21 12:53:52 (41400): Guest Log:  *** Error codes and diagnostics ***
2025-11-21 12:53:52 (41400): Guest Log:     "exeErrorCode": 0,
2025-11-21 12:53:52 (41400): Guest Log:     "exeErrorDiag": "",
2025-11-21 12:53:52 (41400): Guest Log:     "pilotErrorCode": 0,
2025-11-21 12:53:52 (41400): Guest Log:     "pilotErrorDiag": "",
2025-11-21 12:53:52 (41400): Guest Log:  *** Listing of results directory ***
2025-11-21 12:53:52 (41400): Guest Log: total 910336
2025-11-21 12:53:52 (41400): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 20 12:07 pilot3.tar.gz
2025-11-21 12:53:52 (41400): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 20 12:11 queuedata.json
2025-11-21 12:53:52 (41400): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 20 12:11 runpilot2-wrapper.sh
2025-11-21 12:53:52 (41400): Guest Log: -rw-r--r--. 1 atlas atlas     15847 Nov 21 09:13 start_atlas.sh
2025-11-21 12:53:52 (41400): Guest Log: -rw-r--r--. 1 atlas atlas    590104 Nov 21 09:13 input.tar.gz
2025-11-21 12:53:52 (41400): Guest Log: -rw-r--r--. 1 atlas atlas      9077 Nov 21 09:13 init_data.xml
2025-11-21 12:53:52 (41400): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 21 09:13 EVNT.47493127._000404.pool.root.1 -> /data/./ATLAS.root_0
2025-11-21 12:53:52 (41400): Guest Log: -rw-r--r--. 1 atlas atlas      2786 Nov 21 09:13 pandaJob.out
2025-11-21 12:53:52 (41400): Guest Log: -rw-------. 1 atlas atlas    989817 Nov 21 09:13 agis_schedconf.cvmfs.json
2025-11-21 12:53:52 (41400): Guest Log: drwx------. 5 atlas atlas      4096 Nov 21 09:14 pilot3
2025-11-21 12:53:52 (41400): Guest Log: -rw-------. 1 atlas atlas 916592951 Nov 21 18:52 HITS.47523449._004035.pool.root.1
2025-11-21 12:53:52 (41400): Guest Log: -rw-------. 1 atlas atlas      1040 Nov 21 18:52 memory_monitor_summary.json
2025-11-21 12:53:52 (41400): Guest Log: -rw-------. 1 atlas atlas   1526164 Nov 21 18:52 agis_ddmendpoints.agis.ALL.json
2025-11-21 12:53:52 (41400): Guest Log: -rw-------. 1 atlas atlas   1372379 Nov 21 18:52 log.47523449._004035.job.log.tgz.1
2025-11-21 12:53:52 (41400): Guest Log: -rw-------. 1 atlas atlas      8658 Nov 21 18:53 heartbeat.json
2025-11-21 12:53:52 (41400): Guest Log: -rw-------. 1 atlas atlas        95 Nov 21 18:53 pilot_heartbeat.json
2025-11-21 12:53:52 (41400): Guest Log: -rw-------. 1 atlas atlas      4805 Nov 21 18:53 pilotlog.txt
2025-11-21 12:53:52 (41400): Guest Log: -rw-------. 1 atlas atlas   4493709 Nov 21 18:53 log.47523449._004035.job.log.1
2025-11-21 12:53:52 (41400): Guest Log: -rw-------. 1 atlas atlas       353 Nov 21 18:53 output.list
2025-11-21 12:53:52 (41400): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 21 18:53 runtime_log
2025-11-21 12:53:52 (41400): Guest Log: -rw-------. 1 atlas atlas   5888000 Nov 21 18:53 result.tar.gz
2025-11-21 12:53:52 (41400): Guest Log: -rw-------. 1 atlas atlas       665 Nov 21 18:53 Tj2MDmfgIg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDkHKDmBvlbRn.diag
2025-11-21 12:53:52 (41400): Guest Log: -rw-r--r--. 1 atlas atlas      8759 Nov 21 18:53 runtime_log.err
2025-11-21 12:53:52 (41400): Guest Log: Looking for outputfile HITS.47523449._004035.pool.root.1
2025-11-21 12:53:52 (41400): Guest Log: HITS file was successfully produced
2025-11-21 12:53:52 (41400): Guest Log: -rw-------. 1 atlas atlas 916592951 Nov 21 18:52 /home/atlas/RunAtlas/HITS.47523449._004035.pool.root.1
2025-11-21 12:53:52 (41400): Guest Log: Successfully finished the ATLAS job!
2025-11-21 12:53:52 (41400): Guest Log: Copying the results back to the shared directory!
2025-11-21 12:53:52 (41400): Guest Log:  *** Contents of shared directory: ***
2025-11-21 12:53:52 (41400): Guest Log: total 406328
2025-11-21 12:53:52 (41400): Guest Log: -rw-r--r--. 1 root root 409562984 Nov 21 09:12 ATLAS.root_0
2025-11-21 12:53:52 (41400): Guest Log: -rw-r--r--. 1 root root      9077 Nov 21 09:12 init_data.xml
2025-11-21 12:53:52 (41400): Guest Log: -rw-r--r--. 1 root root    590104 Nov 21 09:12 input.tar.gz
2025-11-21 12:53:52 (41400): Guest Log: -rw-r--r--. 1 root root   5888000 Nov 21 18:53 result.tar.gz
2025-11-21 12:53:52 (41400): Guest Log: -rw-r--r--. 1 root root     15847 Nov 21 09:12 start_atlas.sh
2025-11-21 12:53:52 (41400): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-21 12:53:52 (41400): VM Completion File Detected.
2025-11-21 12:53:52 (41400): Powering off VM.
2025-11-21 12:53:52 (41400): Successfully stopped VM.
2025-11-21 12:53:52 (41400): Deregistering VM. (boinc_6d55ef9a8a2704d0, slot#0)
2025-11-21 12:53:52 (41400): Removing network bandwidth throttle group from VM.
2025-11-21 12:53:52 (41400): Removing VM from VirtualBox.
2025-11-21 12:53:57 (41400): called boinc_finish(0)

</stderr_txt>
]]>

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