Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:09:41 (3299303): wrapper (7.7.26015): starting
11:09:41 (3299303): wrapper: running run_atlas (--nthreads 12)
[2025-11-20 11:09:41] Arguments: --nthreads 12
[2025-11-20 11:09:41] Threads: 12
[2025-11-20 11:09:41] Checking for CVMFS
[2025-11-20 11:09:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 11:09:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 11:09:42] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 11:09:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 11:09:43] 2.11.3.0 1506499 20103 228296 153093 2 103 26852780 45568001 13319 130560 0 214042615 99.787 131263290 17015 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-20 11:09:43] CVMFS is ok
[2025-11-20 11:09:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 11:09:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 11:09:43] Further information can be found at the LHC@home message board.
[2025-11-20 11:09:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 11:09:43] Checking for apptainer binary...
[2025-11-20 11:09:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 11:09:43] Running /usr/bin/apptainer --version
[2025-11-20 11:09:43] apptainer version 1.4.1-1.el9
[2025-11-20 11:09:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 11:09:43] wns0169.triumf.lcg
[2025-11-20 11:09:43] apptainer works
[2025-11-20 11:09:43] Set ATHENA_PROC_NUMBER=12
[2025-11-20 11:09:43] Set ATHENA_CORE_NUMBER=12
[2025-11-20 11:09:43] Starting ATLAS job with PandaID=6893867247
[2025-11-20 11:09:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 11:15:13]  *** The last 200 lines of the pilot log: ***
[2025-11-20 11:15:13] 2025-11-20 19:14:34,668 | WARNING  | wrong length of table data, x=[1763665869.0, 1763665930.0], y=[1715.0, 591287.0] (must be same and length>=4)
[2025-11-20 11:15:13] 2025-11-20 19:14:34,689 | INFO     | could have reported an average CPU frequency of 2781 MHz (4 samples)
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | ..............................
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | . Timing measurements:
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | . get job = 0 s
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | . initial setup = 3 s
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | . payload setup = 14 s
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | . stage-in = 0 s
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | . payload execution = 88 s
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | . stage-out = 1 s
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | . log creation = 0 s
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | ..............................
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893867247/pilotlog.txt
[2025-11-20 11:15:13] 2025-11-20 19:14:34,700 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-20 11:15:13] - Log from pilotlog.txt -
[2025-11-20 11:15:13] 2025-11-20 19:14:34,667 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6893867247/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 11:15:13] 2025-11-20 19:14:34,667 | INFO     | extracted standard info from prmon json
[2025-11-20 11:15:13] 2025-11-20 19:14:34,667 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 11:15:13] 2025-11-20 19:14:34,667 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 11:15:13] 2025-11-20 19:14:34,668 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-20 11:15:13] 2025-11-20 19:14:34,668 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-20 11:15:13] 2025-11-20 19:14:34,668 | WARNING  | wrong length of table data, x=[1763665869.0, 1763665930.0], y=[1715.0, 591287.0] (must be same and length>=4)
[2025-11-20 11:15:13] 2025-11-20 19:14:34,689 | INFO     | could have reported an average CPU frequency of 2781 MHz (4 samples)
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | ..............................
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | . Timing measurements:
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | . get job = 0 s
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | . initial setup = 3 s
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | . payload setup = 14 s
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | . stage-in = 0 s
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | . payload execution = 88 s
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | . stage-out = 1 s
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | . log creation = 0 s
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | ..............................
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893867247/pilotlog.txt
[2025-11-20 11:15:13] 2025-11-20 19:14:34,700 | WARNING  | 
[2025-11-20 11:15:13] [begin log extracts]
[2025-11-20 11:15:13] - Log from pilotlog.txt -
[2025-11-20 11:15:13] 2025-11-20 19:14:34,667 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6893867247/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 11:15:13] 2025-11-20 19:14:34,667 | INFO     | extracted standard info from prmon json
[2025-11-20 11:15:13] 2025-11-20 19:14:34,667 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 11:15:13] 2025-11-20 19:14:34,667 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 11:15:13] 2025-11-20 19:14:34,668 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-20 11:15:13] 2025-11-20 19:14:34,668 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-20 11:15:13] 2025-11-20 19:14:34,668 | WARNING  | wrong length of table data, x=[1763665869.0, 1763665930.0], y=[1715.0, 591287.0] (must be same and length>=4)
[2025-11-20 11:15:13] 2025-11-20 19:14:34,689 | INFO     | could have reported an average CPU frequency of 2781 MHz (4 samples)
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | ..............................
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | . Timing measurements:
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | . get job = 0 s
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | . initial setup = 3 s
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | . payload setup = 14 s
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | . stage-in = 0 s
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | . payload execution = 88 s
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | . stage-out = 1 s
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | . log creation = 0 s
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | ..............................
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 11:15:13] 2025-11-20 19:14:34,690 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893867247/pilotlog.txt
[2025-11-20 11:15:13] [end log extracts]
[2025-11-20 11:15:13] 2025-11-20 19:14:34,701 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-20 11:15:13] 2025-11-20 19:14:34,701 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-20 11:15:13] 2025-11-20 19:14:34,785 | INFO     | time since job start (268s) is within the limit (172800.0s)
[2025-11-20 11:15:13] 2025-11-20 19:14:35,288 | INFO     | 
[2025-11-20 11:15:13] 2025-11-20 19:14:35,288 | INFO     | job summary report
[2025-11-20 11:15:13] 2025-11-20 19:14:35,288 | INFO     | --------------------------------------------------
[2025-11-20 11:15:13] 2025-11-20 19:14:35,289 | INFO     | PanDA job id: 6893867247
[2025-11-20 11:15:13] 2025-11-20 19:14:35,289 | INFO     | task id: 47523449
[2025-11-20 11:15:13] 2025-11-20 19:14:35,289 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-20 11:12:17,540 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-20 11:15:13] 2025-11-20 19:14:35,289 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-20 11:15:13] 2025-11-20 19:14:35,289 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 11:15:13] 2025-11-20 19:14:35,289 | INFO     | pilot state: failed 
[2025-11-20 11:15:13] 2025-11-20 19:14:35,289 | INFO     | transexitcode: 65
[2025-11-20 11:15:13] 2025-11-20 19:14:35,289 | INFO     | exeerrorcode: 65
[2025-11-20 11:15:13] 2025-11-20 19:14:35,289 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-20 11:15:13] 2025-11-20 19:14:35,289 | INFO     | exitcode: 65
[2025-11-20 11:15:13] 2025-11-20 19:14:35,289 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-20 11:15:13] 2025-11-20 19:14:35,289 | INFO     | cpuconsumptiontime: 34 s
[2025-11-20 11:15:13] 2025-11-20 19:14:35,289 | INFO     | nevents: 0
[2025-11-20 11:15:13] 2025-11-20 19:14:35,289 | INFO     | neventsw: 0
[2025-11-20 11:15:13] 2025-11-20 19:14:35,289 | INFO     | pid: 3309844
[2025-11-20 11:15:13] 2025-11-20 19:14:35,289 | INFO     | pgrp: 3309844
[2025-11-20 11:15:13] 2025-11-20 19:14:35,289 | INFO     | corecount: 12
[2025-11-20 11:15:13] 2025-11-20 19:14:35,289 | INFO     | event service: False
[2025-11-20 11:15:13] 2025-11-20 19:14:35,289 | INFO     | sizes: {0: 2298804, 11: 2298804, 14: 2299094, 22: 2299122, 106: 2324519, 108: 2328809, 110: 2328965, 236: 2329131}
[2025-11-20 11:15:13] 2025-11-20 19:14:35,289 | INFO     | --------------------------------------------------
[2025-11-20 11:15:13] 2025-11-20 19:14:35,289 | INFO     | 
[2025-11-20 11:15:13] 2025-11-20 19:14:35,290 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-20 11:15:13] 2025-11-20 19:14:35,359 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 11:15:13] 2025-11-20 19:14:35,359 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 11:15:13] 2025-11-20 19:14:35,359 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 11:15:13] 2025-11-20 19:14:35,359 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 11:15:13] 2025-11-20 19:14:35,359 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 11:15:13] 2025-11-20 19:14:35,359 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 11:15:13] 2025-11-20 19:14:35,359 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 11:15:13] 2025-11-20 19:14:35,359 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 11:15:13] 2025-11-20 19:14:35,359 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 11:15:13] 2025-11-20 19:14:35,359 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 11:15:13] 2025-11-20 19:14:35,359 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 11:15:13] 2025-11-20 19:14:35,359 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 11:15:13] 2025-11-20 19:14:35,359 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 11:15:13] 2025-11-20 19:14:35,359 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 11:15:13] 2025-11-20 19:14:35,359 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 11:15:13] 2025-11-20 19:14:35,360 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 11:15:13] 2025-11-20 19:14:35,360 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 11:15:13] 2025-11-20 19:14:35,360 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 11:15:13] 2025-11-20 19:14:35,360 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 11:15:13] 2025-11-20 19:14:35,360 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 11:15:13] 2025-11-20 19:14:35,380 | INFO     | job 6893867247 has completed (purged errors)
[2025-11-20 11:15:13] 2025-11-20 19:14:35,380 | INFO     | overall cleanup function is called
[2025-11-20 11:15:13] 2025-11-20 19:14:36,388 | INFO     | --- collectZombieJob: --- 10, [3309844]
[2025-11-20 11:15:13] 2025-11-20 19:14:36,388 | INFO     | zombie collector waiting for pid 3309844
[2025-11-20 11:15:13] 2025-11-20 19:14:36,388 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 11:15:13] 2025-11-20 19:14:36,389 | INFO     | collected zombie processes
[2025-11-20 11:15:13] 2025-11-20 19:14:36,389 | INFO     | will attempt to kill all subprocesses of pid=3309844
[2025-11-20 11:15:13] 2025-11-20 19:14:37,157 | INFO     | process IDs to be killed: [3309844] (in reverse order)
[2025-11-20 11:15:13] 2025-11-20 19:14:37,455 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 11:15:13] 2025-11-20 19:14:37,456 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 11:15:13] 2025-11-20 19:14:37,482 | INFO     | did not find any defunct processes belonging to 3309844
[2025-11-20 11:15:13] 2025-11-20 19:14:37,520 | INFO     | did not find any defunct processes belonging to 3309844
[2025-11-20 11:15:13] 2025-11-20 19:14:37,521 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 11:15:13] 2025-11-20 19:14:37,521 | INFO     | ready for new job
[2025-11-20 11:15:13] 2025-11-20 19:14:37,521 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 11:15:13] 2025-11-20 19:14:37,522 | INFO     | ***************************************
[2025-11-20 11:15:13] 2025-11-20 19:14:37,523 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 11:15:13] 2025-11-20 19:14:37,523 | INFO     | ***************************************
[2025-11-20 11:15:13] 2025-11-20 19:14:37,523 | INFO     | 
[2025-11-20 11:15:13] 2025-11-20 19:14:37,543 | INFO     | architecture information:
[2025-11-20 11:15:13] 2025-11-20 19:14:37,549 | INFO     | executing command: cat /etc/os-release
[2025-11-20 11:15:13] 2025-11-20 19:14:37,600 | INFO     | cat /etc/os-release:
[2025-11-20 11:15:13] NAME="CentOS Linux"
[2025-11-20 11:15:13] VERSION="7 (Core)"
[2025-11-20 11:15:13] ID="centos"
[2025-11-20 11:15:13] ID_LIKE="rhel fedora"
[2025-11-20 11:15:13] VERSION_ID="7"
[2025-11-20 11:15:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 11:15:13] ANSI_COLOR="0;31"
[2025-11-20 11:15:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 11:15:13] HOME_URL="https://www.centos.org/"
[2025-11-20 11:15:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 11:15:13] 
[2025-11-20 11:15:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 11:15:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 11:15:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 11:15:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 11:15:13] 
[2025-11-20 11:15:13] 2025-11-20 19:14:37,601 | INFO     | ***************************************
[2025-11-20 11:15:13] 2025-11-20 19:14:38,106 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-20 11:15:13] 2025-11-20 19:14:38,209 | INFO     | sufficient remaining disk space (2460215148544 B)
[2025-11-20 11:15:13] 2025-11-20 19:14:38,209 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 11:15:13] 2025-11-20 19:14:38,209 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 11:15:13] 2025-11-20 19:14:38,209 | INFO     | update_server=False
[2025-11-20 11:15:13] 2025-11-20 19:14:38,209 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 11:15:13] 2025-11-20 19:14:38,210 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 11:15:13] 2025-11-20 19:14:38,210 | INFO     | aborting loop
[2025-11-20 11:15:13] 2025-11-20 19:14:38,438 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 11:15:13] 2025-11-20 19:14:38,639 | INFO     | all job control threads have been joined
[2025-11-20 11:15:13] 2025-11-20 19:14:38,934 | INFO     | all data control threads have been joined
[2025-11-20 11:15:13] 2025-11-20 19:14:39,060 | INFO     | all payload control threads have been joined
[2025-11-20 11:15:13] 2025-11-20 19:14:39,215 | INFO     | [job] retrieve thread has finished
[2025-11-20 11:15:13] 2025-11-20 19:14:39,216 | INFO     | [job] job monitor thread has finished
[2025-11-20 11:15:13] 2025-11-20 19:14:39,346 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 11:15:13] 2025-11-20 19:14:39,371 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 11:15:13] 2025-11-20 19:14:39,393 | INFO     | [job] validate thread has finished
[2025-11-20 11:15:13] 2025-11-20 19:14:39,397 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 11:15:13] 2025-11-20 19:14:39,644 | INFO     | [job] control thread has finished
[2025-11-20 11:15:13] 2025-11-20 19:14:39,816 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 11:15:13] 2025-11-20 19:14:39,940 | INFO     | [data] control thread has finished
[2025-11-20 11:15:13] 2025-11-20 19:14:40,033 | INFO     | [payload] failed_post thread has finished
[2025-11-20 11:15:13] 2025-11-20 19:14:40,066 | INFO     | [payload] control thread has finished
[2025-11-20 11:15:13] 2025-11-20 19:14:40,075 | INFO     | [payload] validate_post thread has finished
[2025-11-20 11:15:13] 2025-11-20 19:14:40,205 | INFO     | [data] copytool_in thread has finished
[2025-11-20 11:15:13] 2025-11-20 19:14:40,221 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 11:15:13] 2025-11-20 19:14:40,445 | INFO     | [data] copytool_out thread has finished
[2025-11-20 11:15:13] 2025-11-20 19:14:40,822 | INFO     | [job] queue monitor thread has finished
[2025-11-20 11:15:13] 2025-11-20 19:14:41,631 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 11:15:13] 2025-11-20 19:14:45,639 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 11:15:13] 2025-11-20 19:15:06,767 | INFO     | [monitor] cgroup control has ended
[2025-11-20 11:15:13] 2025-11-20 19:15:07,532 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139953833752384)>', '<ExcThread(monitor, started 139953430316800)>']
[2025-11-20 11:15:13] 2025-11-20 19:15:08,351 | INFO     | PID=3303004 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-20 11:15:13] 2025-11-20 19:15:08,351 | INFO     | .. there are 21 such processes running
[2025-11-20 11:15:13] 2025-11-20 19:15:08,352 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 11:15:13] 2025-11-20 19:15:08,352 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 11:15:13] 2025-11-20 19:15:08,352 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 11:15:13] 2025-11-20 19:15:08,352 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 11:15:13] 2025-11-20 19:15:08,352 | INFO     | [monitor] control thread has ended
[2025-11-20 11:15:13] 2025-11-20 19:15:12,558 | INFO     | all workflow threads have been joined
[2025-11-20 11:15:13] 2025-11-20 19:15:12,558 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 11:15:13] 2025-11-20 19:15:12,559 | INFO     | traces error code: 0
[2025-11-20 11:15:13] 2025-11-20 19:15:12,559 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 11:15:13] 2025-11-20 19:15:12,752 [wrapper] ==== pilot stdout END ====
[2025-11-20 11:15:13] 2025-11-20 19:15:12,754 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 11:15:13] 2025-11-20 19:15:12,755 [wrapper] pilotpid: 3303004
[2025-11-20 11:15:13] 2025-11-20 19:15:12,756 [wrapper] Pilot exit status: 0
[2025-11-20 11:15:13] 2025-11-20 19:15:12,807 [wrapper] pandaids: 6893867247
[2025-11-20 11:15:13] 2025-11-20 19:15:12,852 [wrapper] cleanup supervisor_pilot 3303010 3303005
[2025-11-20 11:15:13] 2025-11-20 19:15:12,854 [wrapper] Test setup, not cleaning
[2025-11-20 11:15:13] 2025-11-20 19:15:12,886 [wrapper] apfmon messages muted
[2025-11-20 11:15:13] 2025-11-20 19:15:12,906 [wrapper] ==== wrapper stdout END ====
[2025-11-20 11:15:13] 2025-11-20 19:15:12,950 [wrapper] ==== wrapper stderr END ====
[2025-11-20 11:15:13]  *** Error codes and diagnostics ***
[2025-11-20 11:15:13]     "exeErrorCode": 65,
[2025-11-20 11:15:13]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-20 11:15:13]     "pilotErrorCode": 1305,
[2025-11-20 11:15:13]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-20 11:15:13]  *** Listing of results directory ***
[2025-11-20 11:15:13] total 403916
[2025-11-20 11:15:13] -rw-r--r--. 1 boinc boinc    576529 Nov 20 06:06 pilot3.tar.gz
[2025-11-20 11:15:13] -rwx------. 1 boinc boinc     36292 Nov 20 06:30 runpilot2-wrapper.sh
[2025-11-20 11:15:13] -rw-r--r--. 1 boinc boinc      5112 Nov 20 06:30 queuedata.json
[2025-11-20 11:15:13] -rw-r--r--. 1 boinc boinc       100 Nov 20 11:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 11:15:13] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 11:09 run_atlas
[2025-11-20 11:15:13] -rw-r--r--. 1 boinc boinc       105 Nov 20 11:09 job.xml
[2025-11-20 11:15:13] -rw-r--r--. 1 boinc boinc      6628 Nov 20 11:09 init_data.xml
[2025-11-20 11:15:13] -rw-r--r--. 2 boinc boinc 409387475 Nov 20 11:09 EVNT.47493127._000617.pool.root.1
[2025-11-20 11:15:13] -rw-r--r--. 2 boinc boinc     15847 Nov 20 11:09 start_atlas.sh
[2025-11-20 11:15:13] drwxrwx--x. 2 boinc boinc      4096 Nov 20 11:09 shared
[2025-11-20 11:15:13] -rw-r--r--. 2 boinc boinc    590099 Nov 20 11:09 input.tar.gz
[2025-11-20 11:15:13] -rw-r--r--. 1 boinc boinc         0 Nov 20 11:09 boinc_lockfile
[2025-11-20 11:15:13] -rw-r--r--. 1 boinc boinc      2786 Nov 20 11:09 pandaJob.out
[2025-11-20 11:15:13] -rw-------. 1 boinc boinc    989472 Nov 20 11:10 agis_schedconf.cvmfs.json
[2025-11-20 11:15:13] -rw-------. 1 boinc boinc   1526164 Nov 20 11:10 agis_ddmendpoints.agis.ALL.json
[2025-11-20 11:15:13] drwx------. 5 boinc boinc      4096 Nov 20 11:10 pilot3
[2025-11-20 11:15:13] -rw-r--r--. 1 boinc boinc       524 Nov 20 11:12 boinc_task_state.xml
[2025-11-20 11:15:13] -rw-------. 1 boinc boinc       992 Nov 20 11:12 memory_monitor_summary.json
[2025-11-20 11:15:13] -rw-------. 1 boinc boinc     48337 Nov 20 11:12 log.47523449._006166.job.log.tgz.1
[2025-11-20 11:15:13] -rw-------. 1 boinc boinc     10339 Nov 20 11:14 heartbeat.json
[2025-11-20 11:15:13] -rw-------. 1 boinc boinc        95 Nov 20 11:15 pilot_heartbeat.json
[2025-11-20 11:15:13] -rw-r--r--. 1 boinc boinc      8192 Nov 20 11:15 boinc_mmap_file
[2025-11-20 11:15:13] -rw-r--r--. 1 boinc boinc        23 Nov 20 11:15 wrapper_checkpoint.txt
[2025-11-20 11:15:13] -rw-------. 1 boinc boinc      4823 Nov 20 11:15 pilotlog.txt
[2025-11-20 11:15:13] -rw-------. 1 boinc boinc     99271 Nov 20 11:15 log.47523449._006166.job.log.1
[2025-11-20 11:15:13] -rw-------. 1 boinc boinc       186 Nov 20 11:15 output.list
[2025-11-20 11:15:13] -rw-r--r--. 1 boinc boinc       620 Nov 20 11:15 runtime_log
[2025-11-20 11:15:13] -rw-------. 1 boinc boinc    174080 Nov 20 11:15 result.tar.gz
[2025-11-20 11:15:13] -rw-r--r--. 1 boinc boinc      8636 Nov 20 11:15 runtime_log.err
[2025-11-20 11:15:13] -rw-------. 1 boinc boinc       647 Nov 20 11:15 a8pLDmBrKg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxnGKDmqXVYTm.diag
[2025-11-20 11:15:13] -rw-r--r--. 1 boinc boinc     22505 Nov 20 11:15 stderr.txt
[2025-11-20 11:15:13] No HITS result produced
[2025-11-20 11:15:13]  *** Contents of shared directory: ***
[2025-11-20 11:15:13] total 400568
[2025-11-20 11:15:13] -rw-r--r--. 2 boinc boinc 409387475 Nov 20 11:09 ATLAS.root_0
[2025-11-20 11:15:13] -rw-r--r--. 2 boinc boinc     15847 Nov 20 11:09 start_atlas.sh
[2025-11-20 11:15:13] -rw-r--r--. 2 boinc boinc    590099 Nov 20 11:09 input.tar.gz
[2025-11-20 11:15:13] -rw-------. 1 boinc boinc    174080 Nov 20 11:15 result.tar.gz
11:15:15 (3299303): run_atlas exited; CPU time 38.738935
11:15:15 (3299303): called boinc_finish(0)

</stderr_txt>
]]>

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