Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:43:04 (1755372): wrapper (7.7.26015): starting
10:43:04 (1755372): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 10:43:04] Arguments: --nthreads 8
[2025-11-20 10:43:04] Threads: 8
[2025-11-20 10:43:04] Checking for CVMFS
[2025-11-20 10:43:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 10:43:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 10:43:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 10:43:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 10:43:05] 2.11.3.0 1967046 20119 210788 153092 1 540 29082243 45568000 10352 130560 0 137339268 99.803 85248324 24808 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-20 10:43:05] CVMFS is ok
[2025-11-20 10:43:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 10:43:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 10:43:05] Further information can be found at the LHC@home message board.
[2025-11-20 10:43:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 10:43:05] Checking for apptainer binary...
[2025-11-20 10:43:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 10:43:05] Running /usr/bin/apptainer --version
[2025-11-20 10:43:06] apptainer version 1.4.1-1.el9
[2025-11-20 10:43:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 10:43:07] wns0023.triumf.lcg
[2025-11-20 10:43:07] apptainer works
[2025-11-20 10:43:07] Set ATHENA_PROC_NUMBER=8
[2025-11-20 10:43:07] Set ATHENA_CORE_NUMBER=8
[2025-11-20 10:43:07] Starting ATLAS job with PandaID=6893864177
[2025-11-20 10:43:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 10:51:41]  *** The last 200 lines of the pilot log: ***
[2025-11-20 10:51:41] 2025-11-20 18:51:01,686 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-20 10:51:41] 2025-11-20 18:51:01,687 | WARNING  | wrong length of table data, x=[1763664276.0, 1763664337.0, 1763664398.0, 1763664459.0, 1763664520.0], y=[2294.0, 613150.0, 372121.0, 519786.0, 823406.0] (must be s
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | ..............................
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | . Timing measurements:
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | . get job = 0 s
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | . initial setup = 3 s
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | . payload setup = 10 s
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | . stage-in = 0 s
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | . payload execution = 262 s
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | . stage-out = 0 s
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | . log creation = 0 s
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | ..............................
[2025-11-20 10:51:41] 2025-11-20 18:51:01,689 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 10:51:41] 2025-11-20 18:51:01,689 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893864177/pilotlog.txt
[2025-11-20 10:51:41] 2025-11-20 18:51:01,702 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-20 10:51:41] - Log from pilotlog.txt -
[2025-11-20 10:51:41] 2025-11-20 18:51:01,685 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6893864177/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 10:51:41] 2025-11-20 18:51:01,686 | INFO     | extracted standard info from prmon json
[2025-11-20 10:51:41] 2025-11-20 18:51:01,686 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 10:51:41] 2025-11-20 18:51:01,686 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 10:51:41] 2025-11-20 18:51:01,686 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-20 10:51:41] 2025-11-20 18:51:01,686 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-20 10:51:41] 2025-11-20 18:51:01,687 | WARNING  | wrong length of table data, x=[1763664276.0, 1763664337.0, 1763664398.0, 1763664459.0, 1763664520.0], y=[2294.0, 613150.0, 372121.0, 519786.0, 823406.0] (must be s
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | ..............................
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | . Timing measurements:
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | . get job = 0 s
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | . initial setup = 3 s
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | . payload setup = 10 s
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | . stage-in = 0 s
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | . payload execution = 262 s
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | . stage-out = 0 s
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | . log creation = 0 s
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | ..............................
[2025-11-20 10:51:41] 2025-11-20 18:51:01,689 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 10:51:41] 2025-11-20 18:51:01,689 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893864177/pilotlog.txt
[2025-11-20 10:51:41] 2025-11-20 18:51:01,702 | WARNING  | 
[2025-11-20 10:51:41] [begin log extracts]
[2025-11-20 10:51:41] - Log from pilotlog.txt -
[2025-11-20 10:51:41] 2025-11-20 18:51:01,685 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6893864177/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 10:51:41] 2025-11-20 18:51:01,686 | INFO     | extracted standard info from prmon json
[2025-11-20 10:51:41] 2025-11-20 18:51:01,686 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 10:51:41] 2025-11-20 18:51:01,686 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 10:51:41] 2025-11-20 18:51:01,686 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-20 10:51:41] 2025-11-20 18:51:01,686 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-20 10:51:41] 2025-11-20 18:51:01,687 | WARNING  | wrong length of table data, x=[1763664276.0, 1763664337.0, 1763664398.0, 1763664459.0, 1763664520.0], y=[2294.0, 613150.0, 372121.0, 519786.0, 823406.0] (must be s
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | ..............................
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | . Timing measurements:
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | . get job = 0 s
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | . initial setup = 3 s
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | . payload setup = 10 s
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | . stage-in = 0 s
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | . payload execution = 262 s
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | . stage-out = 0 s
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | . log creation = 0 s
[2025-11-20 10:51:41] 2025-11-20 18:51:01,688 | INFO     | ..............................
[2025-11-20 10:51:41] 2025-11-20 18:51:01,689 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 10:51:41] 2025-11-20 18:51:01,689 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893864177/pilotlog.txt
[2025-11-20 10:51:41] [end log extracts]
[2025-11-20 10:51:41] 2025-11-20 18:51:01,702 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-20 10:51:41] 2025-11-20 18:51:01,703 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-20 10:51:41] 2025-11-20 18:51:01,828 | INFO     | 
[2025-11-20 10:51:41] 2025-11-20 18:51:01,828 | INFO     | job summary report
[2025-11-20 10:51:41] 2025-11-20 18:51:01,829 | INFO     | --------------------------------------------------
[2025-11-20 10:51:41] 2025-11-20 18:51:01,829 | INFO     | PanDA job id: 6893864177
[2025-11-20 10:51:41] 2025-11-20 18:51:01,829 | INFO     | task id: 47523449
[2025-11-20 10:51:41] 2025-11-20 18:51:01,829 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-20 10:48:42,766 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-20 10:51:41] 2025-11-20 18:51:01,829 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-20 10:51:41] 2025-11-20 18:51:01,829 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 10:51:41] 2025-11-20 18:51:01,829 | INFO     | pilot state: failed 
[2025-11-20 10:51:41] 2025-11-20 18:51:01,829 | INFO     | transexitcode: 65
[2025-11-20 10:51:41] 2025-11-20 18:51:01,829 | INFO     | exeerrorcode: 65
[2025-11-20 10:51:41] 2025-11-20 18:51:01,829 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-20 10:51:41] 2025-11-20 18:51:01,829 | INFO     | exitcode: 65
[2025-11-20 10:51:41] 2025-11-20 18:51:01,829 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-20 10:51:41] 2025-11-20 18:51:01,829 | INFO     | cpuconsumptiontime: 58 s
[2025-11-20 10:51:41] 2025-11-20 18:51:01,830 | INFO     | nevents: 0
[2025-11-20 10:51:41] 2025-11-20 18:51:01,830 | INFO     | neventsw: 0
[2025-11-20 10:51:41] 2025-11-20 18:51:01,830 | INFO     | pid: 1765709
[2025-11-20 10:51:41] 2025-11-20 18:51:01,830 | INFO     | pgrp: 1765709
[2025-11-20 10:51:41] 2025-11-20 18:51:01,830 | INFO     | corecount: 8
[2025-11-20 10:51:41] 2025-11-20 18:51:01,830 | INFO     | event service: False
[2025-11-20 10:51:41] 2025-11-20 18:51:01,830 | INFO     | sizes: {0: 2298804, 11: 2298804, 17: 2299094, 22: 2299122, 273: 2324666, 274: 2329144, 278: 2329144, 408: 2329366}
[2025-11-20 10:51:41] 2025-11-20 18:51:01,830 | INFO     | --------------------------------------------------
[2025-11-20 10:51:41] 2025-11-20 18:51:01,830 | INFO     | 
[2025-11-20 10:51:41] 2025-11-20 18:51:01,830 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-20 10:51:41] 2025-11-20 18:51:01,848 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 10:51:41] 2025-11-20 18:51:01,848 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 10:51:41] 2025-11-20 18:51:01,848 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 10:51:41] 2025-11-20 18:51:01,848 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 10:51:41] 2025-11-20 18:51:01,848 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 10:51:41] 2025-11-20 18:51:01,848 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 10:51:41] 2025-11-20 18:51:01,848 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 10:51:41] 2025-11-20 18:51:01,849 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 10:51:41] 2025-11-20 18:51:01,849 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 10:51:41] 2025-11-20 18:51:01,849 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 10:51:41] 2025-11-20 18:51:01,849 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 10:51:41] 2025-11-20 18:51:01,849 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 10:51:41] 2025-11-20 18:51:01,849 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 10:51:41] 2025-11-20 18:51:01,849 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 10:51:41] 2025-11-20 18:51:01,849 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 10:51:41] 2025-11-20 18:51:01,849 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 10:51:41] 2025-11-20 18:51:01,849 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 10:51:41] 2025-11-20 18:51:01,849 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 10:51:41] 2025-11-20 18:51:01,849 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 10:51:41] 2025-11-20 18:51:01,849 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 10:51:41] 2025-11-20 18:51:01,850 | INFO     | job 6893864177 has completed (purged errors)
[2025-11-20 10:51:41] 2025-11-20 18:51:01,850 | INFO     | overall cleanup function is called
[2025-11-20 10:51:41] 2025-11-20 18:51:02,858 | INFO     | --- collectZombieJob: --- 10, [1765709]
[2025-11-20 10:51:41] 2025-11-20 18:51:02,858 | INFO     | zombie collector waiting for pid 1765709
[2025-11-20 10:51:41] 2025-11-20 18:51:02,858 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 10:51:41] 2025-11-20 18:51:02,858 | INFO     | collected zombie processes
[2025-11-20 10:51:41] 2025-11-20 18:51:02,858 | INFO     | will attempt to kill all subprocesses of pid=1765709
[2025-11-20 10:51:41] 2025-11-20 18:51:03,254 | INFO     | process IDs to be killed: [1765709] (in reverse order)
[2025-11-20 10:51:41] 2025-11-20 18:51:03,316 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 10:51:41] 2025-11-20 18:51:03,317 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 10:51:41] 2025-11-20 18:51:03,362 | INFO     | did not find any defunct processes belonging to 1765709
[2025-11-20 10:51:41] 2025-11-20 18:51:03,370 | INFO     | did not find any defunct processes belonging to 1765709
[2025-11-20 10:51:41] 2025-11-20 18:51:03,371 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 10:51:41] 2025-11-20 18:51:03,371 | INFO     | ready for new job
[2025-11-20 10:51:41] 2025-11-20 18:51:03,371 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 10:51:41] 2025-11-20 18:51:03,372 | INFO     | ***************************************
[2025-11-20 10:51:41] 2025-11-20 18:51:03,373 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 10:51:41] 2025-11-20 18:51:03,373 | INFO     | ***************************************
[2025-11-20 10:51:41] 2025-11-20 18:51:03,373 | INFO     | 
[2025-11-20 10:51:41] 2025-11-20 18:51:03,374 | INFO     | architecture information:
[2025-11-20 10:51:41] 2025-11-20 18:51:03,375 | INFO     | executing command: cat /etc/os-release
[2025-11-20 10:51:41] 2025-11-20 18:51:03,409 | INFO     | cat /etc/os-release:
[2025-11-20 10:51:41] NAME="CentOS Linux"
[2025-11-20 10:51:41] VERSION="7 (Core)"
[2025-11-20 10:51:41] ID="centos"
[2025-11-20 10:51:41] ID_LIKE="rhel fedora"
[2025-11-20 10:51:41] VERSION_ID="7"
[2025-11-20 10:51:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 10:51:41] ANSI_COLOR="0;31"
[2025-11-20 10:51:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 10:51:41] HOME_URL="https://www.centos.org/"
[2025-11-20 10:51:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 10:51:41] 
[2025-11-20 10:51:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 10:51:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 10:51:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 10:51:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 10:51:41] 
[2025-11-20 10:51:41] 2025-11-20 18:51:03,410 | INFO     | ***************************************
[2025-11-20 10:51:41] 2025-11-20 18:51:03,913 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-20 10:51:41] 2025-11-20 18:51:04,024 | INFO     | sufficient remaining disk space (1217843429376 B)
[2025-11-20 10:51:41] 2025-11-20 18:51:04,024 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 10:51:41] 2025-11-20 18:51:04,025 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 10:51:41] 2025-11-20 18:51:04,025 | INFO     | update_server=False
[2025-11-20 10:51:41] 2025-11-20 18:51:04,025 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 10:51:41] 2025-11-20 18:51:04,364 | INFO     | all data control threads have been joined
[2025-11-20 10:51:41] 2025-11-20 18:51:04,536 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 10:51:41] 2025-11-20 18:51:04,621 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 10:51:41] 2025-11-20 18:51:04,621 | INFO     | aborting loop
[2025-11-20 10:51:41] 2025-11-20 18:51:04,870 | INFO     | all job control threads have been joined
[2025-11-20 10:51:41] 2025-11-20 18:51:05,000 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 10:51:41] 2025-11-20 18:51:05,031 | INFO     | [job] retrieve thread has finished
[2025-11-20 10:51:41] 2025-11-20 18:51:05,049 | INFO     | all payload control threads have been joined
[2025-11-20 10:51:41] 2025-11-20 18:51:05,071 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 10:51:41] 2025-11-20 18:51:05,158 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 10:51:41] 2025-11-20 18:51:05,375 | INFO     | [data] control thread has finished
[2025-11-20 10:51:41] 2025-11-20 18:51:05,564 | INFO     | [payload] failed_post thread has finished
[2025-11-20 10:51:41] 2025-11-20 18:51:05,629 | INFO     | [job] job monitor thread has finished
[2025-11-20 10:51:41] 2025-11-20 18:51:05,769 | INFO     | [job] validate thread has finished
[2025-11-20 10:51:41] 2025-11-20 18:51:05,876 | INFO     | [job] control thread has finished
[2025-11-20 10:51:41] 2025-11-20 18:51:05,880 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 10:51:41] 2025-11-20 18:51:05,924 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 10:51:41] 2025-11-20 18:51:05,974 | INFO     | [data] copytool_in thread has finished
[2025-11-20 10:51:41] 2025-11-20 18:51:06,055 | INFO     | [payload] control thread has finished
[2025-11-20 10:51:41] 2025-11-20 18:51:06,398 | INFO     | [payload] validate_post thread has finished
[2025-11-20 10:51:41] 2025-11-20 18:51:06,543 | INFO     | [data] copytool_out thread has finished
[2025-11-20 10:51:41] 2025-11-20 18:51:06,842 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 10:51:41] 2025-11-20 18:51:07,848 | INFO     | [job] queue monitor thread has finished
[2025-11-20 10:51:41] 2025-11-20 18:51:09,009 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 10:51:41] 2025-11-20 18:51:33,886 | INFO     | [monitor] cgroup control has ended
[2025-11-20 10:51:41] 2025-11-20 18:51:35,038 | INFO     | PID=1759065 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-20 10:51:41] 2025-11-20 18:51:35,038 | INFO     | .. there are 19 such processes running
[2025-11-20 10:51:41] 2025-11-20 18:51:35,038 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 10:51:41] 2025-11-20 18:51:35,038 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 10:51:41] 2025-11-20 18:51:35,039 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 10:51:41] 2025-11-20 18:51:35,257 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140020969690944)>', '<ExcThread(monitor, started 140020650317568)>']
[2025-11-20 10:51:41] 2025-11-20 18:51:36,044 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 10:51:41] 2025-11-20 18:51:36,044 | INFO     | [monitor] control thread has ended
[2025-11-20 10:51:41] 2025-11-20 18:51:40,283 | INFO     | all workflow threads have been joined
[2025-11-20 10:51:41] 2025-11-20 18:51:40,283 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 10:51:41] 2025-11-20 18:51:40,284 | INFO     | traces error code: 0
[2025-11-20 10:51:41] 2025-11-20 18:51:40,284 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 10:51:41] 2025-11-20 18:51:40,586 [wrapper] ==== pilot stdout END ====
[2025-11-20 10:51:41] 2025-11-20 18:51:40,619 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 10:51:41] 2025-11-20 18:51:40,641 [wrapper] pilotpid: 1759065
[2025-11-20 10:51:41] 2025-11-20 18:51:40,684 [wrapper] Pilot exit status: 0
[2025-11-20 10:51:41] 2025-11-20 18:51:40,815 [wrapper] pandaids: 6893864177
[2025-11-20 10:51:41] 2025-11-20 18:51:41,016 [wrapper] cleanup supervisor_pilot 1759071 1759066
[2025-11-20 10:51:41] 2025-11-20 18:51:41,062 [wrapper] Test setup, not cleaning
[2025-11-20 10:51:41] 2025-11-20 18:51:41,085 [wrapper] apfmon messages muted
[2025-11-20 10:51:41] 2025-11-20 18:51:41,099 [wrapper] ==== wrapper stdout END ====
[2025-11-20 10:51:41] 2025-11-20 18:51:41,147 [wrapper] ==== wrapper stderr END ====
[2025-11-20 10:51:41]  *** Error codes and diagnostics ***
[2025-11-20 10:51:41]     "exeErrorCode": 65,
[2025-11-20 10:51:41]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-20 10:51:41]     "pilotErrorCode": 1305,
[2025-11-20 10:51:41]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-20 10:51:41]  *** Listing of results directory ***
[2025-11-20 10:51:41] total 404356
[2025-11-20 10:51:41] -rw-r--r--. 1 boinc boinc    576529 Nov 20 06:06 pilot3.tar.gz
[2025-11-20 10:51:41] -rw-r--r--. 1 boinc boinc      5112 Nov 20 06:20 queuedata.json
[2025-11-20 10:51:41] -rwx------. 1 boinc boinc     36292 Nov 20 06:21 runpilot2-wrapper.sh
[2025-11-20 10:51:41] -rw-r--r--. 1 boinc boinc       100 Nov 20 10:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 10:51:41] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 10:43 run_atlas
[2025-11-20 10:51:41] -rw-r--r--. 1 boinc boinc       105 Nov 20 10:43 job.xml
[2025-11-20 10:51:41] -rw-r--r--. 1 boinc boinc      6445 Nov 20 10:43 init_data.xml
[2025-11-20 10:51:41] -rw-r--r--. 2 boinc boinc 409794560 Nov 20 10:43 EVNT.47493127._000600.pool.root.1
[2025-11-20 10:51:41] -rw-r--r--. 2 boinc boinc     15847 Nov 20 10:43 start_atlas.sh
[2025-11-20 10:51:41] drwxrwx--x. 2 boinc boinc      4096 Nov 20 10:43 shared
[2025-11-20 10:51:41] -rw-r--r--. 2 boinc boinc    590102 Nov 20 10:43 input.tar.gz
[2025-11-20 10:51:41] -rw-r--r--. 1 boinc boinc         0 Nov 20 10:43 boinc_lockfile
[2025-11-20 10:51:41] -rw-r--r--. 1 boinc boinc      2786 Nov 20 10:43 pandaJob.out
[2025-11-20 10:51:41] -rw-------. 1 boinc boinc    989472 Nov 20 10:43 agis_schedconf.cvmfs.json
[2025-11-20 10:51:41] -rw-------. 1 boinc boinc   1526164 Nov 20 10:43 agis_ddmendpoints.agis.ALL.json
[2025-11-20 10:51:41] drwx------. 5 boinc boinc      4096 Nov 20 10:43 pilot3
[2025-11-20 10:51:41] -rw-r--r--. 1 boinc boinc       524 Nov 20 10:48 boinc_task_state.xml
[2025-11-20 10:51:41] -rw-------. 1 boinc boinc      1011 Nov 20 10:48 memory_monitor_summary.json
[2025-11-20 10:51:41] -rw-------. 1 boinc boinc     52346 Nov 20 10:48 log.47523449._005998.job.log.tgz.1
[2025-11-20 10:51:41] -rw-------. 1 boinc boinc        95 Nov 20 10:50 pilot_heartbeat.json
[2025-11-20 10:51:41] -rw-------. 1 boinc boinc     10333 Nov 20 10:51 heartbeat.json
[2025-11-20 10:51:41] -rw-r--r--. 1 boinc boinc      8192 Nov 20 10:51 boinc_mmap_file
[2025-11-20 10:51:41] -rw-r--r--. 1 boinc boinc        23 Nov 20 10:51 wrapper_checkpoint.txt
[2025-11-20 10:51:41] -rw-------. 1 boinc boinc      4823 Nov 20 10:51 pilotlog.txt
[2025-11-20 10:51:41] -rw-------. 1 boinc boinc    123287 Nov 20 10:51 log.47523449._005998.job.log.1
[2025-11-20 10:51:41] -rw-------. 1 boinc boinc       186 Nov 20 10:51 output.list
[2025-11-20 10:51:41] -rw-r--r--. 1 boinc boinc       620 Nov 20 10:51 runtime_log
[2025-11-20 10:51:41] -rw-------. 1 boinc boinc    194560 Nov 20 10:51 result.tar.gz
[2025-11-20 10:51:41] -rw-r--r--. 1 boinc boinc      8634 Nov 20 10:51 runtime_log.err
[2025-11-20 10:51:41] -rw-------. 1 boinc boinc       645 Nov 20 10:51 qOyNDmNiKg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmzmGKDmKJc1im.diag
[2025-11-20 10:51:41] -rw-r--r--. 1 boinc boinc     22644 Nov 20 10:51 stderr.txt
[2025-11-20 10:51:41] No HITS result produced
[2025-11-20 10:51:41]  *** Contents of shared directory: ***
[2025-11-20 10:51:41] total 400980
[2025-11-20 10:51:41] -rw-r--r--. 2 boinc boinc 409794560 Nov 20 10:43 ATLAS.root_0
[2025-11-20 10:51:41] -rw-r--r--. 2 boinc boinc     15847 Nov 20 10:43 start_atlas.sh
[2025-11-20 10:51:41] -rw-r--r--. 2 boinc boinc    590102 Nov 20 10:43 input.tar.gz
[2025-11-20 10:51:41] -rw-------. 1 boinc boinc    194560 Nov 20 10:51 result.tar.gz
10:51:43 (1755372): run_atlas exited; CPU time 62.446944
10:51:43 (1755372): called boinc_finish(0)

</stderr_txt>
]]>

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