Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:14:39 (26187): wrapper (7.7.26015): starting
16:14:39 (26187): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 16:14:39] Arguments: --nthreads 8
[2025-11-23 16:14:39] Threads: 8
[2025-11-23 16:14:39] Checking for CVMFS
[2025-11-23 16:14:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 16:14:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 16:14:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 16:14:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 16:14:41] 2.11.2.0 3140 281077 136800 153213 3 47 13389472 25165824 4472 130560 9 161432230 99.909 77778021 3352 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-23 16:14:41] CVMFS is ok
[2025-11-23 16:14:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 16:14:42] Checking for apptainer binary...
[2025-11-23 16:14:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 16:14:42] Running /usr/bin/apptainer --version
[2025-11-23 16:14:42] apptainer version 1.3.2-1.el7
[2025-11-23 16:14:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 16:15:00] cg-vwn243.simple-grid.lan
[2025-11-23 16:15:00] apptainer works
[2025-11-23 16:15:01] Set ATHENA_PROC_NUMBER=8
[2025-11-23 16:15:01] Set ATHENA_CORE_NUMBER=8
[2025-11-23 16:15:01] Starting ATLAS job with PandaID=6893852121
[2025-11-23 16:15:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 14:57:45]  *** The last 200 lines of the pilot log: ***
[2025-11-24 14:57:45] 2025-11-24 13:56:55,690 | INFO     | monitor loop #5447: job 0:6893852121 is in state 'finished'
[2025-11-24 14:57:45] 2025-11-24 13:56:55,690 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 14:57:45] 2025-11-24 13:56:56,970 | INFO     | time since job start (81480s) is within the limit (172800.0s)
[2025-11-24 14:57:45] 2025-11-24 13:56:58,203 | INFO     | monitor loop #5448: job 0:6893852121 is in state 'finished'
[2025-11-24 14:57:45] 2025-11-24 13:56:58,203 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 14:57:45] 2025-11-24 13:56:58,977 | INFO     | time since job start (81482s) is within the limit (172800.0s)
[2025-11-24 14:57:45] 2025-11-24 13:57:00,718 | INFO     | monitor loop #5449: job 0:6893852121 is in state 'finished'
[2025-11-24 14:57:45] 2025-11-24 13:57:00,718 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 14:57:45] 2025-11-24 13:57:00,984 | INFO     | time since job start (81484s) is within the limit (172800.0s)
[2025-11-24 14:57:45] 2025-11-24 13:57:02,991 | INFO     | time since job start (81486s) is within the limit (172800.0s)
[2025-11-24 14:57:45] 2025-11-24 13:57:03,223 | INFO     | monitor loop #5450: job 0:6893852121 is in state 'finished'
[2025-11-24 14:57:45] 2025-11-24 13:57:03,223 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 14:57:45] 2025-11-24 13:57:04,998 | INFO     | time since job start (81488s) is within the limit (172800.0s)
[2025-11-24 14:57:45] 2025-11-24 13:57:05,732 | INFO     | monitor loop #5451: job 0:6893852121 is in state 'finished'
[2025-11-24 14:57:45] 2025-11-24 13:57:05,732 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 14:57:45] 2025-11-24 13:57:07,009 | INFO     | time since job start (81491s) is within the limit (172800.0s)
[2025-11-24 14:57:45] 2025-11-24 13:57:07,300 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 14:57:45] 2025-11-24 13:57:07,301 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-24 14:57:45] 2025-11-24 13:57:07,303 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6893852121/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 14:57:45] 2025-11-24 13:57:07,304 | INFO     | extracted standard info from prmon json
[2025-11-24 14:57:45] 2025-11-24 13:57:07,304 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 14:57:45] 2025-11-24 13:57:07,304 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 14:57:45] 2025-11-24 13:57:07,340 | INFO     | fitting pss+swap vs Time
[2025-11-24 14:57:45] 2025-11-24 13:57:07,343 | INFO     | sum of square deviations: 722938395594.5283
[2025-11-24 14:57:45] 2025-11-24 13:57:07,402 | INFO     | sum of deviations: 2264439743261.511
[2025-11-24 14:57:45] 2025-11-24 13:57:07,402 | INFO     | mean x: 1763952059.724736
[2025-11-24 14:57:45] 2025-11-24 13:57:07,402 | INFO     | mean y: 2812500.963046757
[2025-11-24 14:57:45] 2025-11-24 13:57:07,402 | INFO     | intersect: -5522365264.652542
[2025-11-24 14:57:45] 2025-11-24 13:57:07,404 | INFO     | chi2: 26.3636863231943
[2025-11-24 14:57:45] 2025-11-24 13:57:07,406 | INFO     | sum of square deviations: 714791510239.5021
[2025-11-24 14:57:45] 2025-11-24 13:57:07,463 | INFO     | sum of deviations: 2692445313945.9253
[2025-11-24 14:57:45] 2025-11-24 13:57:07,463 | INFO     | mean x: 1763951907.2293718
[2025-11-24 14:57:45] 2025-11-24 13:57:07,464 | INFO     | mean y: 2820511.5018925057
[2025-11-24 14:57:45] 2025-11-24 13:57:07,464 | INFO     | intersect: -6641556175.420925
[2025-11-24 14:57:45] 2025-11-24 13:57:07,465 | INFO     | chi2: 23.127448008503173
[2025-11-24 14:57:45] 2025-11-24 13:57:07,465 | INFO     | current chi2=23.127448008503173 (change=12.275363448866191 %)
[2025-11-24 14:57:45] 2025-11-24 13:57:07,466 | INFO     | right removable region: 1320
[2025-11-24 14:57:45] 2025-11-24 13:57:07,468 | INFO     | sum of square deviations: 714790519599.5018
[2025-11-24 14:57:45] 2025-11-24 13:57:07,525 | INFO     | sum of deviations: 1742102004006.0168
[2025-11-24 14:57:45] 2025-11-24 13:57:07,525 | INFO     | mean x: 1763952212.2293718
[2025-11-24 14:57:45] 2025-11-24 13:57:07,526 | INFO     | mean y: 2822276.092354277
[2025-11-24 14:57:45] 2025-11-24 13:57:07,526 | INFO     | intersect: -4296317960.99058
[2025-11-24 14:57:45] 2025-11-24 13:57:07,527 | INFO     | chi2: 22.20004425163332
[2025-11-24 14:57:45] 2025-11-24 13:57:07,528 | INFO     | current chi2=22.20004425163332 (change=15.793095170829293 %)
[2025-11-24 14:57:45] 2025-11-24 13:57:07,528 | INFO     | left removable region: 10
[2025-11-24 14:57:45] 2025-11-24 13:57:07,530 | INFO     | sum of square deviations: 697082333134.2363
[2025-11-24 14:57:45] 2025-11-24 13:57:07,593 | INFO     | sum of deviations: 1824540353565.964
[2025-11-24 14:57:45] 2025-11-24 13:57:07,593 | INFO     | mean x: 1763952181.7396946
[2025-11-24 14:57:45] 2025-11-24 13:57:07,593 | INFO     | mean y: 2840512.1083969465
[2025-11-24 14:57:45] 2025-11-24 13:57:07,593 | INFO     | intersect: -4614120475.662086
[2025-11-24 14:57:45] 2025-11-24 13:57:07,595 | INFO     | chi2: 15.311811879085683
[2025-11-24 14:57:45] 2025-11-24 13:57:07,595 | INFO     | current memory leak: 2.62 B/s (using 1310 data points, chi2=15.31)
[2025-11-24 14:57:45] 2025-11-24 13:57:07,596 | INFO     | could have reported an average CPU frequency of 1999 MHz (45 samples)
[2025-11-24 14:57:45] 2025-11-24 13:57:07,597 | INFO     | ..............................
[2025-11-24 14:57:45] 2025-11-24 13:57:07,597 | INFO     | . Timing measurements:
[2025-11-24 14:57:45] 2025-11-24 13:57:07,597 | INFO     | . get job = 0 s
[2025-11-24 14:57:45] 2025-11-24 13:57:07,597 | INFO     | . initial setup = 9 s
[2025-11-24 14:57:45] 2025-11-24 13:57:07,597 | INFO     | . payload setup = 143 s
[2025-11-24 14:57:45] 2025-11-24 13:57:07,597 | INFO     | . stage-in = 0 s
[2025-11-24 14:57:45] 2025-11-24 13:57:07,597 | INFO     | . payload execution = 81049 s
[2025-11-24 14:57:45] 2025-11-24 13:57:07,597 | INFO     | . stage-out = 5 s
[2025-11-24 14:57:45] 2025-11-24 13:57:07,597 | INFO     | . log creation = 2 s
[2025-11-24 14:57:45] 2025-11-24 13:57:07,598 | INFO     | ..............................
[2025-11-24 14:57:45] 2025-11-24 13:57:08,052 | INFO     | 
[2025-11-24 14:57:45] 2025-11-24 13:57:08,052 | INFO     | job summary report
[2025-11-24 14:57:45] 2025-11-24 13:57:08,052 | INFO     | --------------------------------------------------
[2025-11-24 14:57:45] 2025-11-24 13:57:08,052 | INFO     | PanDA job id: 6893852121
[2025-11-24 14:57:45] 2025-11-24 13:57:08,052 | INFO     | task id: 47523449
[2025-11-24 14:57:45] 2025-11-24 13:57:08,053 | INFO     | errors: (none)
[2025-11-24 14:57:45] 2025-11-24 13:57:08,053 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 14:57:45] 2025-11-24 13:57:08,053 | INFO     | pilot state: finished 
[2025-11-24 14:57:45] 2025-11-24 13:57:08,053 | INFO     | transexitcode: 0
[2025-11-24 14:57:45] 2025-11-24 13:57:08,053 | INFO     | exeerrorcode: 0
[2025-11-24 14:57:45] 2025-11-24 13:57:08,053 | INFO     | exeerrordiag: 
[2025-11-24 14:57:45] 2025-11-24 13:57:08,053 | INFO     | exitcode: 0
[2025-11-24 14:57:45] 2025-11-24 13:57:08,053 | INFO     | exitmsg: OK
[2025-11-24 14:57:45] 2025-11-24 13:57:08,053 | INFO     | cpuconsumptiontime: 343811 s
[2025-11-24 14:57:45] 2025-11-24 13:57:08,054 | INFO     | nevents: 1000
[2025-11-24 14:57:45] 2025-11-24 13:57:08,054 | INFO     | neventsw: 0
[2025-11-24 14:57:45] 2025-11-24 13:57:08,054 | INFO     | pid: 4247
[2025-11-24 14:57:45] 2025-11-24 13:57:08,054 | INFO     | pgrp: 4247
[2025-11-24 14:57:45] 2025-11-24 13:57:08,054 | INFO     | corecount: 8
[2025-11-24 14:57:45] 2025-11-24 13:57:08,054 | INFO     | event service: False
[2025-11-24 14:57:45] 2025-11-24 13:57:08,054 | INFO     | sizes: {0: 2298580, 1: 2298636, 2: 2298863, 3: 2298863, 13: 2298891, 24: 2298947, 35: 2299103, 45: 2299131, 56: 2299159, 67: 2299187, 78: 2299215, 89: 2299551, 94:
[2025-11-24 14:57:45] 2025-11-24 13:57:08,054 | INFO     | --------------------------------------------------
[2025-11-24 14:57:45] 2025-11-24 13:57:08,055 | INFO     | 
[2025-11-24 14:57:45] 2025-11-24 13:57:08,055 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-24 14:57:45] 2025-11-24 13:57:08,675 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 14:57:45] 2025-11-24 13:57:08,676 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 14:57:45] 2025-11-24 13:57:08,676 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 14:57:45] 2025-11-24 13:57:08,676 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 14:57:45] 2025-11-24 13:57:08,676 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 14:57:45] 2025-11-24 13:57:08,676 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 14:57:45] 2025-11-24 13:57:08,676 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 14:57:45] 2025-11-24 13:57:08,676 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 14:57:45] 2025-11-24 13:57:08,677 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 14:57:45] 2025-11-24 13:57:08,677 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 14:57:45] 2025-11-24 13:57:08,677 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 14:57:45] 2025-11-24 13:57:08,677 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 14:57:45] 2025-11-24 13:57:08,677 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 14:57:45] 2025-11-24 13:57:08,677 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 14:57:45] 2025-11-24 13:57:08,677 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 14:57:45] 2025-11-24 13:57:08,677 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 14:57:45] 2025-11-24 13:57:08,677 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 14:57:45] 2025-11-24 13:57:08,678 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 14:57:45] 2025-11-24 13:57:08,678 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 14:57:45] 2025-11-24 13:57:08,678 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 14:57:45] 2025-11-24 13:57:08,678 | INFO     | job 6893852121 has completed (purged errors)
[2025-11-24 14:57:45] 2025-11-24 13:57:08,678 | INFO     | overall cleanup function is called
[2025-11-24 14:57:45] 2025-11-24 13:57:09,703 | INFO     | --- collectZombieJob: --- 10, [4247]
[2025-11-24 14:57:45] 2025-11-24 13:57:09,703 | INFO     | zombie collector waiting for pid 4247
[2025-11-24 14:57:45] 2025-11-24 13:57:09,703 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 14:57:45] 2025-11-24 13:57:09,703 | INFO     | collected zombie processes
[2025-11-24 14:57:45] 2025-11-24 13:57:09,703 | INFO     | will attempt to kill all subprocesses of pid=4247
[2025-11-24 14:57:45] 2025-11-24 13:57:09,780 | INFO     | process IDs to be killed: [4247] (in reverse order)
[2025-11-24 14:57:45] 2025-11-24 13:57:10,956 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 14:57:45] 2025-11-24 13:57:10,957 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 14:57:45] 2025-11-24 13:57:10,959 | INFO     | did not find any defunct processes belonging to 4247
[2025-11-24 14:57:45] 2025-11-24 13:57:10,961 | INFO     | did not find any defunct processes belonging to 4247
[2025-11-24 14:57:45] 2025-11-24 13:57:10,997 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 14:57:45] 2025-11-24 13:57:10,997 | INFO     | ready for new job
[2025-11-24 14:57:45] 2025-11-24 13:57:10,998 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 14:57:45] 2025-11-24 13:57:11,003 | INFO     | ***************************************
[2025-11-24 14:57:45] 2025-11-24 13:57:11,003 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 14:57:45] 2025-11-24 13:57:11,003 | INFO     | ***************************************
[2025-11-24 14:57:45] 2025-11-24 13:57:11,003 | INFO     | 
[2025-11-24 14:57:45] 2025-11-24 13:57:11,004 | INFO     | pilot is running in a VM
[2025-11-24 14:57:45] 2025-11-24 13:57:11,004 | INFO     | architecture information:
[2025-11-24 14:57:45] 2025-11-24 13:57:11,020 | INFO     | executing command: cat /etc/os-release
[2025-11-24 14:57:45] 2025-11-24 13:57:11,305 | INFO     | cat /etc/os-release:
[2025-11-24 14:57:45] NAME="CentOS Linux"
[2025-11-24 14:57:45] VERSION="7 (Core)"
[2025-11-24 14:57:45] ID="centos"
[2025-11-24 14:57:45] ID_LIKE="rhel fedora"
[2025-11-24 14:57:45] VERSION_ID="7"
[2025-11-24 14:57:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 14:57:45] ANSI_COLOR="0;31"
[2025-11-24 14:57:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 14:57:45] HOME_URL="https://www.centos.org/"
[2025-11-24 14:57:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 14:57:45] 
[2025-11-24 14:57:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 14:57:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 14:57:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 14:57:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 14:57:45] 
[2025-11-24 14:57:45] 2025-11-24 13:57:11,306 | INFO     | ***************************************
[2025-11-24 14:57:45] 2025-11-24 13:57:11,809 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-24 14:57:45] 2025-11-24 13:57:11,984 | INFO     | sufficient remaining disk space (495033778176 B)
[2025-11-24 14:57:45] 2025-11-24 13:57:11,984 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 14:57:45] 2025-11-24 13:57:11,984 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 14:57:45] 2025-11-24 13:57:11,984 | INFO     | update_server=False
[2025-11-24 14:57:45] 2025-11-24 13:57:11,984 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 14:57:45] 2025-11-24 13:57:11,985 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 14:57:45] 2025-11-24 13:57:11,986 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 14:57:45] 2025-11-24 13:57:11,986 | INFO     | aborting loop
[2025-11-24 14:57:45] 2025-11-24 13:57:12,175 | INFO     | all payload control threads have been joined
[2025-11-24 14:57:45] 2025-11-24 13:57:12,563 | INFO     | all data control threads have been joined
[2025-11-24 14:57:45] 2025-11-24 13:57:12,739 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 14:57:45] 2025-11-24 13:57:12,927 | INFO     | all job control threads have been joined
[2025-11-24 14:57:45] 2025-11-24 13:57:12,951 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 14:57:45] 2025-11-24 13:57:12,990 | INFO     | [job] retrieve thread has finished
[2025-11-24 14:57:45] 2025-11-24 13:57:12,995 | INFO     | [job] job monitor thread has finished
[2025-11-24 14:57:45] 2025-11-24 13:57:13,181 | INFO     | [payload] control thread has finished
[2025-11-24 14:57:45] 2025-11-24 13:57:13,319 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 14:57:45] 2025-11-24 13:57:13,569 | INFO     | [data] control thread has finished
[2025-11-24 14:57:45] 2025-11-24 13:57:13,745 | INFO     | [job] queue monitor thread has finished
[2025-11-24 14:57:45] 2025-11-24 13:57:13,933 | INFO     | [job] control thread has finished
[2025-11-24 14:57:45] 2025-11-24 13:57:13,998 | INFO     | [data] copytool_in thread has finished
[2025-11-24 14:57:45] 2025-11-24 13:57:14,040 | INFO     | [payload] validate_post thread has finished
[2025-11-24 14:57:45] 2025-11-24 13:57:14,050 | INFO     | [job] validate thread has finished
[2025-11-24 14:57:45] 2025-11-24 13:57:14,075 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 14:57:45] 2025-11-24 13:57:14,101 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 14:57:45] 2025-11-24 13:57:14,237 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 14:57:45] 2025-11-24 13:57:14,577 | INFO     | [payload] failed_post thread has finished
[2025-11-24 14:57:45] 2025-11-24 13:57:14,957 | INFO     | [data] copytool_out thread has finished
[2025-11-24 14:57:45] 2025-11-24 13:57:15,994 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 14:57:45] 2025-11-24 13:57:17,216 | INFO     | [monitor] cgroup control has ended
[2025-11-24 14:57:45] 2025-11-24 13:57:19,176 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140213654628160)>', '<ExcThread(monitor, started 140213200336640)>']
[2025-11-24 14:57:45] 2025-11-24 13:57:24,202 | INFO     | all workflow threads have been joined
[2025-11-24 14:57:45] 2025-11-24 13:57:24,202 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 14:57:45] 2025-11-24 13:57:24,202 | INFO     | traces error code: 0
[2025-11-24 14:57:45] 2025-11-24 13:57:24,203 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 14:57:45] 2025-11-24 13:57:40,190 | INFO     | PID=30008 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 14:57:45] 2025-11-24 13:57:40,190 | INFO     | .. there are 2 such processes running
[2025-11-24 14:57:45] 2025-11-24 13:57:40,191 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 14:57:45] 2025-11-24 13:57:40,191 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 14:57:45] 2025-11-24 13:57:40,191 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 14:57:45] 2025-11-24 13:57:40,191 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 14:57:45] 2025-11-24 13:57:40,191 | INFO     | [monitor] control thread has ended
[2025-11-24 14:57:45] 2025-11-24 13:57:40,417 [wrapper] ==== pilot stdout END ====
[2025-11-24 14:57:45] 2025-11-24 13:57:40,500 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 14:57:45] 2025-11-24 13:57:40,606 [wrapper] pilotpid: 30008
[2025-11-24 14:57:45] 2025-11-24 13:57:40,693 [wrapper] Pilot exit status: 0
[2025-11-24 14:57:45] 2025-11-24 13:57:41,127 [wrapper] pandaids: 6893852121
[2025-11-24 14:57:45] 2025-11-24 13:57:42,031 [wrapper] cleanup supervisor_pilot 28963 30009
[2025-11-24 14:57:45] 2025-11-24 13:57:42,179 [wrapper] Test setup, not cleaning
[2025-11-24 14:57:45] 2025-11-24 13:57:42,248 [wrapper] apfmon messages muted
[2025-11-24 14:57:45] 2025-11-24 13:57:42,325 [wrapper] ==== wrapper stdout END ====
[2025-11-24 14:57:45] 2025-11-24 13:57:42,413 [wrapper] ==== wrapper stderr END ====
[2025-11-24 14:57:45]  *** Error codes and diagnostics ***
[2025-11-24 14:57:45]     "exeErrorCode": 0,
[2025-11-24 14:57:45]     "exeErrorDiag": "",
[2025-11-24 14:57:45]     "pilotErrorCode": 0,
[2025-11-24 14:57:45]     "pilotErrorDiag": "",
[2025-11-24 14:57:45]  *** Listing of results directory ***
[2025-11-24 14:57:45] total 1334660
[2025-11-24 14:57:45] -rw-r--r--. 1 boinc boinc    576529 Nov 20 12:09 pilot3.tar.gz
[2025-11-24 14:57:45] -rwx------. 1 boinc boinc     36292 Nov 20 12:45 runpilot2-wrapper.sh
[2025-11-24 14:57:45] -rw-r--r--. 1 boinc boinc      5112 Nov 20 12:45 queuedata.json
[2025-11-24 14:57:45] -rw-r--r--. 1 boinc boinc       100 Nov 23 16:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 14:57:45] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 16:14 run_atlas
[2025-11-24 14:57:45] -rw-r--r--. 1 boinc boinc       105 Nov 23 16:14 job.xml
[2025-11-24 14:57:45] -rw-r--r--. 1 boinc boinc      6391 Nov 23 16:14 init_data.xml
[2025-11-24 14:57:45] -rw-r--r--. 2 boinc boinc 411774727 Nov 23 16:14 EVNT.47493127._000363.pool.root.1
[2025-11-24 14:57:45] -rw-r--r--. 2 boinc boinc     15847 Nov 23 16:14 start_atlas.sh
[2025-11-24 14:57:45] drwxrwx--x. 2 boinc boinc        68 Nov 23 16:14 shared
[2025-11-24 14:57:45] -rw-r--r--. 2 boinc boinc    590100 Nov 23 16:14 input.tar.gz
[2025-11-24 14:57:45] -rw-r--r--. 1 boinc boinc         0 Nov 23 16:14 boinc_lockfile
[2025-11-24 14:57:45] -rw-r--r--. 1 boinc boinc      2786 Nov 23 16:15 pandaJob.out
[2025-11-24 14:57:45] -rw-------. 1 boinc boinc    989785 Nov 23 16:18 agis_schedconf.cvmfs.json
[2025-11-24 14:57:45] drwx------. 5 boinc boinc      4096 Nov 23 16:18 pilot3
[2025-11-24 14:57:45] -rw-r--r--. 1 boinc boinc       533 Nov 24 14:24 boinc_task_state.xml
[2025-11-24 14:57:45] -rw-------. 1 boinc boinc 924559861 Nov 24 14:53 HITS.47523449._003628.pool.root.1
[2025-11-24 14:57:45] -rw-------. 1 boinc boinc      1033 Nov 24 14:55 memory_monitor_summary.json
[2025-11-24 14:57:45] -rw-------. 1 boinc boinc   1516227 Nov 24 14:55 agis_ddmendpoints.agis.ALL.json
[2025-11-24 14:57:45] -rw-------. 1 boinc boinc   2441646 Nov 24 14:55 log.47523449._003628.job.log.tgz.1
[2025-11-24 14:57:45] -rw-------. 1 boinc boinc        95 Nov 24 14:56 pilot_heartbeat.json
[2025-11-24 14:57:45] -rw-------. 1 boinc boinc      7951 Nov 24 14:57 heartbeat.json
[2025-11-24 14:57:45] -rw-r--r--. 1 boinc boinc      8192 Nov 24 14:57 boinc_mmap_file
[2025-11-24 14:57:45] -rw-r--r--. 1 boinc boinc        29 Nov 24 14:57 wrapper_checkpoint.txt
[2025-11-24 14:57:45] -rw-------. 1 boinc boinc       820 Nov 24 14:57 pilotlog.txt
[2025-11-24 14:57:45] -rw-------. 1 boinc boinc  10791965 Nov 24 14:57 log.47523449._003628.job.log.1
[2025-11-24 14:57:45] -rw-------. 1 boinc boinc       353 Nov 24 14:57 output.list
[2025-11-24 14:57:45] -rw-r--r--. 1 boinc boinc       620 Nov 24 14:57 runtime_log
[2025-11-24 14:57:45] -rw-------. 1 boinc boinc  13250560 Nov 24 14:57 result.tar.gz
[2025-11-24 14:57:45] -rw-------. 1 boinc boinc       662 Nov 24 14:57 U3cNDmoHIg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVfHKDmx9G9Sn.diag
[2025-11-24 14:57:45] -rw-r--r--. 1 boinc boinc      8817 Nov 24 14:57 runtime_log.err
[2025-11-24 14:57:45] -rw-r--r--. 1 boinc boinc     21430 Nov 24 14:57 stderr.txt
[2025-11-24 14:57:45] HITS file was successfully produced:
[2025-11-24 14:57:45] -rw-------. 1 boinc boinc 924559861 Nov 24 14:53 shared/HITS.pool.root.1
[2025-11-24 14:57:45]  *** Contents of shared directory: ***
[2025-11-24 14:57:45] total 1318552
[2025-11-24 14:57:45] -rw-r--r--. 2 boinc boinc 411774727 Nov 23 16:14 ATLAS.root_0
[2025-11-24 14:57:45] -rw-r--r--. 2 boinc boinc     15847 Nov 23 16:14 start_atlas.sh
[2025-11-24 14:57:45] -rw-r--r--. 2 boinc boinc    590100 Nov 23 16:14 input.tar.gz
[2025-11-24 14:57:45] -rw-------. 1 boinc boinc 924559861 Nov 24 14:53 HITS.pool.root.1
[2025-11-24 14:57:45] -rw-------. 1 boinc boinc  13250560 Nov 24 14:57 result.tar.gz
14:57:46 (26187): run_atlas exited; CPU time 344134.933364
14:57:46 (26187): called boinc_finish(0)

</stderr_txt>
]]>

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