Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:32:54 (17350): wrapper (7.7.26015): starting
17:32:54 (17350): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 17:32:54] Arguments: --nthreads 8
[2025-11-23 17:32:54] Threads: 8
[2025-11-23 17:32:54] Checking for CVMFS
[2025-11-23 17:32:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 17:32:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 17:32:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 17:32:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 17:32:57] 2.11.2.0 9859 281151 137912 153215 3 184 19871287 25165825 4568 130560 3 146196657 99.890 82143187 3464 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-23 17:32:57] CVMFS is ok
[2025-11-23 17:32:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 17:32:57] Checking for apptainer binary...
[2025-11-23 17:32:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 17:32:57] Running /usr/bin/apptainer --version
[2025-11-23 17:32:57] apptainer version 1.3.2-1.el7
[2025-11-23 17:32:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 17:33:05] cg-vwn461.simple-grid.lan
[2025-11-23 17:33:05] apptainer works
[2025-11-23 17:33:05] Set ATHENA_PROC_NUMBER=8
[2025-11-23 17:33:05] Set ATHENA_CORE_NUMBER=8
[2025-11-23 17:33:05] Starting ATLAS job with PandaID=6893851962
[2025-11-23 17:33:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 12:46:49]  *** The last 200 lines of the pilot log: ***
[2025-11-24 12:46:49] 2025-11-24 11:45:56,961 | INFO     | time since job start (69136s) is within the limit (172800.0s)
[2025-11-24 12:46:49] 2025-11-24 11:45:58,911 | INFO     | monitor loop #4627: job 0:6893851962 is in state 'finished'
[2025-11-24 12:46:49] 2025-11-24 11:45:58,911 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 12:46:49] 2025-11-24 11:45:58,967 | INFO     | time since job start (69138s) is within the limit (172800.0s)
[2025-11-24 12:46:49] 2025-11-24 11:46:00,974 | INFO     | time since job start (69140s) is within the limit (172800.0s)
[2025-11-24 12:46:49] 2025-11-24 11:46:01,418 | INFO     | monitor loop #4628: job 0:6893851962 is in state 'finished'
[2025-11-24 12:46:49] 2025-11-24 11:46:01,418 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 12:46:49] 2025-11-24 11:46:02,981 | INFO     | time since job start (69142s) is within the limit (172800.0s)
[2025-11-24 12:46:49] 2025-11-24 11:46:03,928 | INFO     | monitor loop #4629: job 0:6893851962 is in state 'finished'
[2025-11-24 12:46:49] 2025-11-24 11:46:03,928 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 12:46:49] 2025-11-24 11:46:04,137 | INFO     | PID=21176 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 12:46:49] 2025-11-24 11:46:04,138 | INFO     | .. there are 2 such processes running
[2025-11-24 12:46:49] 2025-11-24 11:46:05,139 | INFO     | time since job start (69145s) is within the limit (172800.0s)
[2025-11-24 12:46:49] 2025-11-24 11:46:06,224 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 12:46:49] 2025-11-24 11:46:06,226 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2250.0
[2025-11-24 12:46:49] 2025-11-24 11:46:06,229 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-6893851962/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 12:46:49] 2025-11-24 11:46:06,230 | INFO     | extracted standard info from prmon json
[2025-11-24 12:46:49] 2025-11-24 11:46:06,230 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 12:46:49] 2025-11-24 11:46:06,230 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 12:46:49] 2025-11-24 11:46:06,265 | INFO     | fitting pss+swap vs Time
[2025-11-24 12:46:49] 2025-11-24 11:46:06,267 | INFO     | sum of square deviations: 448594182038.37885
[2025-11-24 12:46:49] 2025-11-24 11:46:06,344 | INFO     | sum of deviations: 661197079515.4226
[2025-11-24 12:46:49] 2025-11-24 11:46:06,344 | INFO     | mean x: 1763950135.056587
[2025-11-24 12:46:49] 2025-11-24 11:46:06,345 | INFO     | mean y: 2809743.4933687
[2025-11-24 12:46:49] 2025-11-24 11:46:06,345 | INFO     | intersect: -2597131861.6576047
[2025-11-24 12:46:49] 2025-11-24 11:46:06,346 | INFO     | chi2: 20.04004238965614
[2025-11-24 12:46:49] 2025-11-24 11:46:06,348 | INFO     | sum of square deviations: 442671114515.27167
[2025-11-24 12:46:49] 2025-11-24 11:46:06,401 | INFO     | sum of deviations: 1031538724568.6565
[2025-11-24 12:46:49] 2025-11-24 11:46:06,401 | INFO     | mean x: 1763949982.5612788
[2025-11-24 12:46:49] 2025-11-24 11:46:06,402 | INFO     | mean y: 2819277.4325044407
[2025-11-24 12:46:49] 2025-11-24 11:46:06,402 | INFO     | intersect: -4107642542.9792986
[2025-11-24 12:46:49] 2025-11-24 11:46:06,403 | INFO     | chi2: 16.64814063931713
[2025-11-24 12:46:49] 2025-11-24 11:46:06,403 | INFO     | current chi2=16.64814063931713 (change=16.925621634861272 %)
[2025-11-24 12:46:49] 2025-11-24 11:46:06,404 | INFO     | right removable region: 1125
[2025-11-24 12:46:49] 2025-11-24 11:46:06,405 | INFO     | sum of square deviations: 442670454313.39307
[2025-11-24 12:46:49] 2025-11-24 11:46:06,443 | INFO     | sum of deviations: 349491622359.27435
[2025-11-24 12:46:49] 2025-11-24 11:46:06,449 | INFO     | mean x: 1763950287.5603907
[2025-11-24 12:46:49] 2025-11-24 11:46:06,449 | INFO     | mean y: 2817759.378330373
[2025-11-24 12:46:49] 2025-11-24 11:46:06,449 | INFO     | intersect: -1389834137.2041824
[2025-11-24 12:46:49] 2025-11-24 11:46:06,451 | INFO     | chi2: 17.724940646813906
[2025-11-24 12:46:49] 2025-11-24 11:46:06,451 | INFO     | current chi2=17.724940646813906 (change=11.552379470201101 %)
[2025-11-24 12:46:49] 2025-11-24 11:46:06,451 | INFO     | left removable region: 10
[2025-11-24 12:46:49] 2025-11-24 11:46:06,453 | INFO     | sum of square deviations: 429823480771.35077
[2025-11-24 12:46:49] 2025-11-24 11:46:06,464 | INFO     | monitor loop #4630: job 0:6893851962 is in state 'finished'
[2025-11-24 12:46:49] 2025-11-24 11:46:06,464 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 12:46:49] 2025-11-24 11:46:06,503 | INFO     | sum of deviations: 733205310039.9651
[2025-11-24 12:46:49] 2025-11-24 11:46:06,504 | INFO     | mean x: 1763950257.064574
[2025-11-24 12:46:49] 2025-11-24 11:46:06,504 | INFO     | mean y: 2831177.5560538117
[2025-11-24 12:46:49] 2025-11-24 11:46:06,504 | INFO     | intersect: -3006166127.11682
[2025-11-24 12:46:49] 2025-11-24 11:46:06,505 | INFO     | chi2: 13.507494353257075
[2025-11-24 12:46:49] 2025-11-24 11:46:06,506 | INFO     | current memory leak: 1.71 B/s (using 1115 data points, chi2=13.51)
[2025-11-24 12:46:49] 2025-11-24 11:46:06,509 | INFO     | could have reported an average CPU frequency of 2250 MHz (39 samples)
[2025-11-24 12:46:49] 2025-11-24 11:46:06,509 | INFO     | ..............................
[2025-11-24 12:46:49] 2025-11-24 11:46:06,509 | INFO     | . Timing measurements:
[2025-11-24 12:46:49] 2025-11-24 11:46:06,509 | INFO     | . get job = 0 s
[2025-11-24 12:46:49] 2025-11-24 11:46:06,509 | INFO     | . initial setup = 3 s
[2025-11-24 12:46:49] 2025-11-24 11:46:06,509 | INFO     | . payload setup = 10 s
[2025-11-24 12:46:49] 2025-11-24 11:46:06,509 | INFO     | . stage-in = 0 s
[2025-11-24 12:46:49] 2025-11-24 11:46:06,509 | INFO     | . payload execution = 69002 s
[2025-11-24 12:46:49] 2025-11-24 11:46:06,510 | INFO     | . stage-out = 4 s
[2025-11-24 12:46:49] 2025-11-24 11:46:06,510 | INFO     | . log creation = 1 s
[2025-11-24 12:46:49] 2025-11-24 11:46:06,510 | INFO     | ..............................
[2025-11-24 12:46:49] 2025-11-24 11:46:06,919 | INFO     | 
[2025-11-24 12:46:49] 2025-11-24 11:46:06,919 | INFO     | job summary report
[2025-11-24 12:46:49] 2025-11-24 11:46:06,919 | INFO     | --------------------------------------------------
[2025-11-24 12:46:49] 2025-11-24 11:46:06,919 | INFO     | PanDA job id: 6893851962
[2025-11-24 12:46:49] 2025-11-24 11:46:06,919 | INFO     | task id: 47523449
[2025-11-24 12:46:49] 2025-11-24 11:46:06,920 | INFO     | errors: (none)
[2025-11-24 12:46:49] 2025-11-24 11:46:06,920 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 12:46:49] 2025-11-24 11:46:06,920 | INFO     | pilot state: finished 
[2025-11-24 12:46:49] 2025-11-24 11:46:06,920 | INFO     | transexitcode: 0
[2025-11-24 12:46:49] 2025-11-24 11:46:06,920 | INFO     | exeerrorcode: 0
[2025-11-24 12:46:49] 2025-11-24 11:46:06,920 | INFO     | exeerrordiag: 
[2025-11-24 12:46:49] 2025-11-24 11:46:06,920 | INFO     | exitcode: 0
[2025-11-24 12:46:49] 2025-11-24 11:46:06,920 | INFO     | exitmsg: OK
[2025-11-24 12:46:49] 2025-11-24 11:46:06,920 | INFO     | cpuconsumptiontime: 305655 s
[2025-11-24 12:46:49] 2025-11-24 11:46:06,921 | INFO     | nevents: 1000
[2025-11-24 12:46:49] 2025-11-24 11:46:06,921 | INFO     | neventsw: 0
[2025-11-24 12:46:49] 2025-11-24 11:46:06,921 | INFO     | pid: 27677
[2025-11-24 12:46:49] 2025-11-24 11:46:06,921 | INFO     | pgrp: 27677
[2025-11-24 12:46:49] 2025-11-24 11:46:06,921 | INFO     | corecount: 8
[2025-11-24 12:46:49] 2025-11-24 11:46:06,921 | INFO     | event service: False
[2025-11-24 12:46:49] 2025-11-24 11:46:06,921 | INFO     | sizes: {0: 2298637, 1: 2298836, 8: 2299098, 12: 2299126, 69014: 2352519, 69019: 2362306, 69023: 2362490, 69127: 2362736}
[2025-11-24 12:46:49] 2025-11-24 11:46:06,921 | INFO     | --------------------------------------------------
[2025-11-24 12:46:49] 2025-11-24 11:46:06,921 | INFO     | 
[2025-11-24 12:46:49] 2025-11-24 11:46:06,922 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2025-11-24 12:46:49] 2025-11-24 11:46:07,147 | INFO     | time since job start (69147s) is within the limit (172800.0s)
[2025-11-24 12:46:49] 2025-11-24 11:46:07,542 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 12:46:49] 2025-11-24 11:46:07,542 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 12:46:49] 2025-11-24 11:46:07,543 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 12:46:49] 2025-11-24 11:46:07,543 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 12:46:49] 2025-11-24 11:46:07,543 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 12:46:49] 2025-11-24 11:46:07,543 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 12:46:49] 2025-11-24 11:46:07,543 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 12:46:49] 2025-11-24 11:46:07,543 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 12:46:49] 2025-11-24 11:46:07,543 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 12:46:49] 2025-11-24 11:46:07,543 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 12:46:49] 2025-11-24 11:46:07,543 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 12:46:49] 2025-11-24 11:46:07,544 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 12:46:49] 2025-11-24 11:46:07,544 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 12:46:49] 2025-11-24 11:46:07,544 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 12:46:49] 2025-11-24 11:46:07,544 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 12:46:49] 2025-11-24 11:46:07,544 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 12:46:49] 2025-11-24 11:46:07,544 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 12:46:49] 2025-11-24 11:46:07,544 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 12:46:49] 2025-11-24 11:46:07,544 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 12:46:49] 2025-11-24 11:46:07,544 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 12:46:49] 2025-11-24 11:46:07,545 | INFO     | job 6893851962 has completed (purged errors)
[2025-11-24 12:46:49] 2025-11-24 11:46:07,545 | INFO     | overall cleanup function is called
[2025-11-24 12:46:49] 2025-11-24 11:46:08,561 | INFO     | --- collectZombieJob: --- 10, [27677]
[2025-11-24 12:46:49] 2025-11-24 11:46:08,561 | INFO     | zombie collector waiting for pid 27677
[2025-11-24 12:46:49] 2025-11-24 11:46:08,561 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 12:46:49] 2025-11-24 11:46:08,561 | INFO     | collected zombie processes
[2025-11-24 12:46:49] 2025-11-24 11:46:08,561 | INFO     | will attempt to kill all subprocesses of pid=27677
[2025-11-24 12:46:49] 2025-11-24 11:46:08,640 | INFO     | process IDs to be killed: [27677] (in reverse order)
[2025-11-24 12:46:49] 2025-11-24 11:46:08,909 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 12:46:49] 2025-11-24 11:46:08,910 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 12:46:49] 2025-11-24 11:46:08,912 | INFO     | did not find any defunct processes belonging to 27677
[2025-11-24 12:46:49] 2025-11-24 11:46:08,914 | INFO     | did not find any defunct processes belonging to 27677
[2025-11-24 12:46:49] 2025-11-24 11:46:08,961 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 12:46:49] 2025-11-24 11:46:08,961 | INFO     | ready for new job
[2025-11-24 12:46:49] 2025-11-24 11:46:08,961 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 12:46:49] 2025-11-24 11:46:08,966 | INFO     | ***************************************
[2025-11-24 12:46:49] 2025-11-24 11:46:08,966 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 12:46:49] 2025-11-24 11:46:08,966 | INFO     | ***************************************
[2025-11-24 12:46:49] 2025-11-24 11:46:08,966 | INFO     | 
[2025-11-24 12:46:49] 2025-11-24 11:46:08,967 | INFO     | pilot is running in a VM
[2025-11-24 12:46:49] 2025-11-24 11:46:08,967 | INFO     | architecture information:
[2025-11-24 12:46:49] 2025-11-24 11:46:08,976 | INFO     | executing command: cat /etc/os-release
[2025-11-24 12:46:49] 2025-11-24 11:46:09,086 | INFO     | cat /etc/os-release:
[2025-11-24 12:46:49] NAME="CentOS Linux"
[2025-11-24 12:46:49] VERSION="7 (Core)"
[2025-11-24 12:46:49] ID="centos"
[2025-11-24 12:46:49] ID_LIKE="rhel fedora"
[2025-11-24 12:46:49] VERSION_ID="7"
[2025-11-24 12:46:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 12:46:49] ANSI_COLOR="0;31"
[2025-11-24 12:46:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 12:46:49] HOME_URL="https://www.centos.org/"
[2025-11-24 12:46:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 12:46:49] 
[2025-11-24 12:46:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 12:46:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 12:46:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 12:46:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 12:46:49] 
[2025-11-24 12:46:49] 2025-11-24 11:46:09,086 | INFO     | ***************************************
[2025-11-24 12:46:49] 2025-11-24 11:46:09,590 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2025-11-24 12:46:49] 2025-11-24 11:46:09,853 | INFO     | sufficient remaining disk space (495364079616 B)
[2025-11-24 12:46:49] 2025-11-24 11:46:09,853 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 12:46:49] 2025-11-24 11:46:09,854 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 12:46:49] 2025-11-24 11:46:09,854 | INFO     | update_server=False
[2025-11-24 12:46:49] 2025-11-24 11:46:09,854 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 12:46:49] 2025-11-24 11:46:09,975 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 12:46:49] 2025-11-24 11:46:09,975 | INFO     | aborting loop
[2025-11-24 12:46:49] 2025-11-24 11:46:10,195 | INFO     | all payload control threads have been joined
[2025-11-24 12:46:49] 2025-11-24 11:46:10,347 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 12:46:49] 2025-11-24 11:46:10,794 | INFO     | all data control threads have been joined
[2025-11-24 12:46:49] 2025-11-24 11:46:10,797 | INFO     | all job control threads have been joined
[2025-11-24 12:46:49] 2025-11-24 11:46:10,860 | INFO     | [job] retrieve thread has finished
[2025-11-24 12:46:49] 2025-11-24 11:46:10,981 | INFO     | [job] job monitor thread has finished
[2025-11-24 12:46:49] 2025-11-24 11:46:11,069 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 12:46:49] 2025-11-24 11:46:11,089 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 12:46:49] 2025-11-24 11:46:11,201 | INFO     | [payload] control thread has finished
[2025-11-24 12:46:49] 2025-11-24 11:46:11,349 | INFO     | [payload] failed_post thread has finished
[2025-11-24 12:46:49] 2025-11-24 11:46:11,658 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 12:46:49] 2025-11-24 11:46:11,800 | INFO     | [data] control thread has finished
[2025-11-24 12:46:49] 2025-11-24 11:46:11,803 | INFO     | [job] control thread has finished
[2025-11-24 12:46:49] 2025-11-24 11:46:11,806 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 12:46:49] 2025-11-24 11:46:11,885 | INFO     | [job] validate thread has finished
[2025-11-24 12:46:49] 2025-11-24 11:46:12,012 | INFO     | [data] copytool_in thread has finished
[2025-11-24 12:46:49] 2025-11-24 11:46:12,199 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 12:46:49] 2025-11-24 11:46:12,354 | INFO     | [data] copytool_out thread has finished
[2025-11-24 12:46:49] 2025-11-24 11:46:12,356 | INFO     | [payload] validate_post thread has finished
[2025-11-24 12:46:49] 2025-11-24 11:46:12,569 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 12:46:49] 2025-11-24 11:46:12,664 | INFO     | [job] queue monitor thread has finished
[2025-11-24 12:46:49] 2025-11-24 11:46:16,578 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 12:46:49] 2025-11-24 11:46:39,849 | INFO     | [monitor] cgroup control has ended
[2025-11-24 12:46:49] 2025-11-24 11:46:40,265 | INFO     | PID=21176 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 12:46:49] 2025-11-24 11:46:40,265 | INFO     | .. there are 2 such processes running
[2025-11-24 12:46:49] 2025-11-24 11:46:40,265 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 12:46:49] 2025-11-24 11:46:40,265 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 12:46:49] 2025-11-24 11:46:40,266 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 12:46:49] 2025-11-24 11:46:41,277 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139634122708800)>', '<ExcThread(monitor, started 139633547540224)>']
[2025-11-24 12:46:49] 2025-11-24 11:46:42,278 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 12:46:49] 2025-11-24 11:46:42,278 | INFO     | [monitor] control thread has ended
[2025-11-24 12:46:49] 2025-11-24 11:46:46,303 | INFO     | all workflow threads have been joined
[2025-11-24 12:46:49] 2025-11-24 11:46:46,303 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 12:46:49] 2025-11-24 11:46:46,303 | INFO     | traces error code: 0
[2025-11-24 12:46:49] 2025-11-24 11:46:46,303 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 12:46:49] 2025-11-24 11:46:46,821 [wrapper] ==== pilot stdout END ====
[2025-11-24 12:46:49] 2025-11-24 11:46:46,871 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 12:46:49] 2025-11-24 11:46:46,978 [wrapper] pilotpid: 21176
[2025-11-24 12:46:49] 2025-11-24 11:46:47,084 [wrapper] Pilot exit status: 0
[2025-11-24 12:46:49] 2025-11-24 11:46:47,180 [wrapper] pandaids: 6893851962
[2025-11-24 12:46:49] 2025-11-24 11:46:47,208 [wrapper] cleanup supervisor_pilot 12559 21177
[2025-11-24 12:46:49] 2025-11-24 11:46:47,211 [wrapper] Test setup, not cleaning
[2025-11-24 12:46:49] 2025-11-24 11:46:47,269 [wrapper] apfmon messages muted
[2025-11-24 12:46:49] 2025-11-24 11:46:47,354 [wrapper] ==== wrapper stdout END ====
[2025-11-24 12:46:49] 2025-11-24 11:46:47,467 [wrapper] ==== wrapper stderr END ====
[2025-11-24 12:46:49]  *** Error codes and diagnostics ***
[2025-11-24 12:46:49]     "exeErrorCode": 0,
[2025-11-24 12:46:49]     "exeErrorDiag": "",
[2025-11-24 12:46:49]     "pilotErrorCode": 0,
[2025-11-24 12:46:49]     "pilotErrorDiag": "",
[2025-11-24 12:46:49]  *** Listing of results directory ***
[2025-11-24 12:46:49] total 1331360
[2025-11-24 12:46:49] -rw-r--r--. 1 boinc boinc    576529 Nov 20 12:09 pilot3.tar.gz
[2025-11-24 12:46:49] -rw-r--r--. 1 boinc boinc      5112 Nov 20 12:45 queuedata.json
[2025-11-24 12:46:49] -rwx------. 1 boinc boinc     36292 Nov 20 12:46 runpilot2-wrapper.sh
[2025-11-24 12:46:49] -rw-r--r--. 1 boinc boinc       100 Nov 23 17:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 12:46:49] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 17:32 run_atlas
[2025-11-24 12:46:49] -rw-r--r--. 1 boinc boinc       105 Nov 23 17:32 job.xml
[2025-11-24 12:46:49] -rw-r--r--. 2 boinc boinc 410345616 Nov 23 17:32 EVNT.47493127._000361.pool.root.1
[2025-11-24 12:46:49] -rw-r--r--. 1 boinc boinc      6393 Nov 23 17:32 init_data.xml
[2025-11-24 12:46:49] -rw-r--r--. 2 boinc boinc     15847 Nov 23 17:32 start_atlas.sh
[2025-11-24 12:46:49] drwxrwx--x. 2 boinc boinc        68 Nov 23 17:32 shared
[2025-11-24 12:46:49] -rw-r--r--. 2 boinc boinc    590106 Nov 23 17:32 input.tar.gz
[2025-11-24 12:46:49] -rw-r--r--. 1 boinc boinc         0 Nov 23 17:32 boinc_lockfile
[2025-11-24 12:46:49] -rw-r--r--. 1 boinc boinc      2786 Nov 23 17:33 pandaJob.out
[2025-11-24 12:46:49] -rw-------. 1 boinc boinc    989785 Nov 23 17:33 agis_schedconf.cvmfs.json
[2025-11-24 12:46:49] drwx------. 5 boinc boinc      4096 Nov 23 17:33 pilot3
[2025-11-24 12:46:49] -rw-r--r--. 1 boinc boinc       533 Nov 24 12:14 boinc_task_state.xml
[2025-11-24 12:46:49] -rw-------. 1 boinc boinc 926087888 Nov 24 12:43 HITS.47523449._003607.pool.root.1
[2025-11-24 12:46:49] -rw-------. 1 boinc boinc      1035 Nov 24 12:44 memory_monitor_summary.json
[2025-11-24 12:46:49] -rw-------. 1 boinc boinc   1516227 Nov 24 12:44 agis_ddmendpoints.agis.ALL.json
[2025-11-24 12:46:49] -rw-------. 1 boinc boinc   2277296 Nov 24 12:44 log.47523449._003607.job.log.tgz.1
[2025-11-24 12:46:49] -rw-------. 1 boinc boinc        95 Nov 24 12:45 pilot_heartbeat.json
[2025-11-24 12:46:49] -rw-------. 1 boinc boinc      7938 Nov 24 12:46 heartbeat.json
[2025-11-24 12:46:49] -rw-r--r--. 1 boinc boinc      8192 Nov 24 12:46 boinc_mmap_file
[2025-11-24 12:46:49] -rw-r--r--. 1 boinc boinc        29 Nov 24 12:46 wrapper_checkpoint.txt
[2025-11-24 12:46:49] -rw-------. 1 boinc boinc      4885 Nov 24 12:46 pilotlog.txt
[2025-11-24 12:46:49] -rw-------. 1 boinc boinc   9216332 Nov 24 12:46 log.47523449._003607.job.log.1
[2025-11-24 12:46:49] -rw-------. 1 boinc boinc       353 Nov 24 12:46 output.list
[2025-11-24 12:46:49] -rw-r--r--. 1 boinc boinc       620 Nov 24 12:46 runtime_log
[2025-11-24 12:46:49] -rw-------. 1 boinc boinc  11509760 Nov 24 12:46 result.tar.gz
[2025-11-24 12:46:49] -rw-r--r--. 1 boinc boinc      8833 Nov 24 12:46 runtime_log.err
[2025-11-24 12:46:49] -rw-------. 1 boinc boinc       661 Nov 24 12:46 DXXNDmSIIg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmBZGKDmj1p8Xm.diag
[2025-11-24 12:46:49] -rw-r--r--. 1 boinc boinc     21464 Nov 24 12:46 stderr.txt
[2025-11-24 12:46:49] HITS file was successfully produced:
[2025-11-24 12:46:49] -rw-------. 1 boinc boinc 926087888 Nov 24 12:43 shared/HITS.pool.root.1
[2025-11-24 12:46:49]  *** Contents of shared directory: ***
[2025-11-24 12:46:49] total 1316952
[2025-11-24 12:46:49] -rw-r--r--. 2 boinc boinc 410345616 Nov 23 17:32 ATLAS.root_0
[2025-11-24 12:46:49] -rw-r--r--. 2 boinc boinc     15847 Nov 23 17:32 start_atlas.sh
[2025-11-24 12:46:49] -rw-r--r--. 2 boinc boinc    590106 Nov 23 17:32 input.tar.gz
[2025-11-24 12:46:49] -rw-------. 1 boinc boinc 926087888 Nov 24 12:43 HITS.pool.root.1
[2025-11-24 12:46:49] -rw-------. 1 boinc boinc  11509760 Nov 24 12:46 result.tar.gz
12:46:51 (17350): run_atlas exited; CPU time 305852.848590
12:46:51 (17350): called boinc_finish(0)

</stderr_txt>
]]>

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