Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:20:17 (3272788): wrapper (7.7.26015): starting
23:20:17 (3272788): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 23:20:17] Arguments: --nthreads 8
[2025-11-20 23:20:17] Threads: 8
[2025-11-20 23:20:17] Checking for CVMFS
[2025-11-20 23:20:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 23:20:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 23:20:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 23:20:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 23:20:20] 2.13.2.0 4359 26044 273632 153108 2 134 24213172 40960001 8930 16776704 0 29952089 99.532 34789351 27275 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 23:20:20] CVMFS is ok
[2025-11-20 23:20:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 23:20:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 23:20:20] Further information can be found at the LHC@home message board.
[2025-11-20 23:20:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 23:20:20] Checking for apptainer binary...
[2025-11-20 23:20:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 23:20:20] Running /usr/bin/apptainer --version
[2025-11-20 23:20:20] apptainer version 1.4.4-1.el9
[2025-11-20 23:20:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 23:20:21] c-211-14.aglt2.org
[2025-11-20 23:20:21] apptainer works
[2025-11-20 23:20:21] Set ATHENA_PROC_NUMBER=8
[2025-11-20 23:20:21] Set ATHENA_CORE_NUMBER=8
[2025-11-20 23:20:21] Starting ATLAS job with PandaID=6893850243
[2025-11-20 23:20:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 08:08:28]  *** The last 200 lines of the pilot log: ***
[2025-11-22 08:08:28] 2025-11-22 13:07:47,712 | INFO     | 117981s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-22 08:08:28] 2025-11-22 13:07:48,178 | INFO     | monitor loop #7291: job 0:6893850243 is in state 'finished'
[2025-11-22 08:08:28] 2025-11-22 13:07:48,178 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 08:08:28] 2025-11-22 13:07:49,719 | INFO     | time since job start (117978s) is within the limit (172800.0s)
[2025-11-22 08:08:28] 2025-11-22 13:07:50,688 | INFO     | monitor loop #7292: job 0:6893850243 is in state 'finished'
[2025-11-22 08:08:28] 2025-11-22 13:07:50,689 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 08:08:28] 2025-11-22 13:07:51,760 | INFO     | time since job start (117980s) is within the limit (172800.0s)
[2025-11-22 08:08:28] 2025-11-22 13:07:52,736 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 08:08:28] 2025-11-22 13:07:52,751 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2636.0206249999997
[2025-11-22 08:08:28] 2025-11-22 13:07:52,832 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6893850243/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 08:08:28] 2025-11-22 13:07:52,833 | INFO     | extracted standard info from prmon json
[2025-11-22 08:08:28] 2025-11-22 13:07:52,833 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 08:08:28] 2025-11-22 13:07:52,834 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 08:08:28] 2025-11-22 13:07:52,868 | INFO     | fitting pss+swap vs Time
[2025-11-22 08:08:28] 2025-11-22 13:07:52,871 | INFO     | sum of square deviations: 2236653115884.389
[2025-11-22 08:08:28] 2025-11-22 13:07:52,970 | INFO     | sum of deviations: 9548809094015.37
[2025-11-22 08:08:28] 2025-11-22 13:07:52,971 | INFO     | mean x: 1763757934.3700829
[2025-11-22 08:08:28] 2025-11-22 13:07:52,971 | INFO     | mean y: 2992103.8302277434
[2025-11-22 08:08:28] 2025-11-22 13:07:52,971 | INFO     | intersect: -7526913934.681892
[2025-11-22 08:08:28] 2025-11-22 13:07:52,974 | INFO     | chi2: 15.876921083610835
[2025-11-22 08:08:28] 2025-11-22 13:07:52,976 | INFO     | sum of square deviations: 2219340690397.7896
[2025-11-22 08:08:28] 2025-11-22 13:07:53,075 | INFO     | sum of deviations: 10259895497832.393
[2025-11-22 08:08:28] 2025-11-22 13:07:53,075 | INFO     | mean x: 1763757781.8879087
[2025-11-22 08:08:28] 2025-11-22 13:07:53,076 | INFO     | mean y: 2998366.7239231966
[2025-11-22 08:08:28] 2025-11-22 13:07:53,076 | INFO     | intersect: -8150761262.860087
[2025-11-22 08:08:28] 2025-11-22 13:07:53,078 | INFO     | chi2: 12.404661762630619
[2025-11-22 08:08:28] 2025-11-22 13:07:53,079 | INFO     | current chi2=12.404661762630619 (change=21.86985312010212 %)
[2025-11-22 08:08:28] 2025-11-22 13:07:53,079 | INFO     | right removable region: 1926
[2025-11-22 08:08:28] 2025-11-22 13:07:53,082 | INFO     | sum of square deviations: 2219332593867.789
[2025-11-22 08:08:28] 2025-11-22 13:07:53,240 | INFO     | sum of deviations: 8742225183885.547
[2025-11-22 08:08:28] 2025-11-22 13:07:53,240 | INFO     | mean x: 1763758086.8879087
[2025-11-22 08:08:28] 2025-11-22 13:07:53,240 | INFO     | mean y: 2999205.6875973013
[2025-11-22 08:08:28] 2025-11-22 13:07:53,240 | INFO     | intersect: -6944661729.89177
[2025-11-22 08:08:28] 2025-11-22 13:07:53,243 | INFO     | chi2: 11.721873648987835
[2025-11-22 08:08:28] 2025-11-22 13:07:53,243 | INFO     | current chi2=11.721873648987835 (change=26.17036018974802 %)
[2025-11-22 08:08:28] 2025-11-22 13:07:53,246 | INFO     | sum of square deviations: 2202101701437.4546
[2025-11-22 08:08:28] 2025-11-22 13:07:53,252 | INFO     | monitor loop #7293: job 0:6893850243 is in state 'finished'
[2025-11-22 08:08:28] 2025-11-22 13:07:53,253 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 08:08:28] 2025-11-22 13:07:53,334 | INFO     | sum of deviations: 8056951864295.035
[2025-11-22 08:08:28] 2025-11-22 13:07:53,334 | INFO     | mean x: 1763758239.4058273
[2025-11-22 08:08:28] 2025-11-22 13:07:53,334 | INFO     | mean y: 3005271.1742976066
[2025-11-22 08:08:28] 2025-11-22 13:07:53,334 | INFO     | intersect: -6450155010.147126
[2025-11-22 08:08:28] 2025-11-22 13:07:53,337 | INFO     | chi2: 8.833817795502206
[2025-11-22 08:08:28] 2025-11-22 13:07:53,338 | INFO     | current chi2=8.833817795502206 (change=24.63817594327173 %)
[2025-11-22 08:08:28] 2025-11-22 13:07:53,338 | INFO     | left removable region: 20
[2025-11-22 08:08:28] 2025-11-22 13:07:53,340 | INFO     | sum of square deviations: 2147572746835.6248
[2025-11-22 08:08:28] 2025-11-22 13:07:53,426 | INFO     | sum of deviations: 8366290837688.496
[2025-11-22 08:08:28] 2025-11-22 13:07:53,426 | INFO     | mean x: 1763758361.4611752
[2025-11-22 08:08:28] 2025-11-22 13:07:53,426 | INFO     | mean y: 3018078.9527806924
[2025-11-22 08:08:28] 2025-11-22 13:07:53,426 | INFO     | intersect: -6868048543.182249
[2025-11-22 08:08:28] 2025-11-22 13:07:53,429 | INFO     | chi2: 3.4624953992922123
[2025-11-22 08:08:28] 2025-11-22 13:07:53,429 | INFO     | current memory leak: 3.90 B/s (using 1906 data points, chi2=3.46)
[2025-11-22 08:08:28] 2025-11-22 13:07:53,431 | INFO     | could have reported an average CPU frequency of 2682 MHz (68 samples)
[2025-11-22 08:08:28] 2025-11-22 13:07:53,431 | INFO     | ..............................
[2025-11-22 08:08:28] 2025-11-22 13:07:53,431 | INFO     | . Timing measurements:
[2025-11-22 08:08:28] 2025-11-22 13:07:53,431 | INFO     | . get job = 0 s
[2025-11-22 08:08:28] 2025-11-22 13:07:53,431 | INFO     | . initial setup = 4 s
[2025-11-22 08:08:28] 2025-11-22 13:07:53,431 | INFO     | . payload setup = 45 s
[2025-11-22 08:08:28] 2025-11-22 13:07:53,431 | INFO     | . stage-in = 0 s
[2025-11-22 08:08:28] 2025-11-22 13:07:53,431 | INFO     | . payload execution = 117836 s
[2025-11-22 08:08:28] 2025-11-22 13:07:53,432 | INFO     | . stage-out = 5 s
[2025-11-22 08:08:28] 2025-11-22 13:07:53,432 | INFO     | . log creation = 2 s
[2025-11-22 08:08:28] 2025-11-22 13:07:53,432 | INFO     | ..............................
[2025-11-22 08:08:28] 2025-11-22 13:07:53,827 | INFO     | time since job start (117982s) is within the limit (172800.0s)
[2025-11-22 08:08:28] 2025-11-22 13:07:53,972 | INFO     | 
[2025-11-22 08:08:28] 2025-11-22 13:07:53,973 | INFO     | job summary report
[2025-11-22 08:08:28] 2025-11-22 13:07:53,973 | INFO     | --------------------------------------------------
[2025-11-22 08:08:28] 2025-11-22 13:07:53,973 | INFO     | PanDA job id: 6893850243
[2025-11-22 08:08:28] 2025-11-22 13:07:53,973 | INFO     | task id: 47523449
[2025-11-22 08:08:28] 2025-11-22 13:07:53,973 | INFO     | errors: (none)
[2025-11-22 08:08:28] 2025-11-22 13:07:53,973 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 08:08:28] 2025-11-22 13:07:53,973 | INFO     | pilot state: finished 
[2025-11-22 08:08:28] 2025-11-22 13:07:53,973 | INFO     | transexitcode: 0
[2025-11-22 08:08:28] 2025-11-22 13:07:53,974 | INFO     | exeerrorcode: 0
[2025-11-22 08:08:28] 2025-11-22 13:07:53,974 | INFO     | exeerrordiag: 
[2025-11-22 08:08:28] 2025-11-22 13:07:53,974 | INFO     | exitcode: 0
[2025-11-22 08:08:28] 2025-11-22 13:07:53,974 | INFO     | exitmsg: OK
[2025-11-22 08:08:28] 2025-11-22 13:07:53,974 | INFO     | cpuconsumptiontime: 320152 s
[2025-11-22 08:08:28] 2025-11-22 13:07:53,974 | INFO     | nevents: 1000
[2025-11-22 08:08:28] 2025-11-22 13:07:53,974 | INFO     | neventsw: 0
[2025-11-22 08:08:28] 2025-11-22 13:07:53,974 | INFO     | pid: 3285960
[2025-11-22 08:08:28] 2025-11-22 13:07:53,974 | INFO     | pgrp: 3285960
[2025-11-22 08:08:28] 2025-11-22 13:07:53,975 | INFO     | corecount: 8
[2025-11-22 08:08:28] 2025-11-22 13:07:53,975 | INFO     | event service: False
[2025-11-22 08:08:28] 2025-11-22 13:07:53,975 | INFO     | sizes: {0: 2297979, 1: 2298664, 2: 2298664, 3: 2298891, 14: 2298891, 25: 2298919, 34: 2299337, 36: 2299365, 117885: 2379956, 117886: 2379955, 117892: 2389005, 1178
[2025-11-22 08:08:28] 2025-11-22 13:07:53,975 | INFO     | --------------------------------------------------
[2025-11-22 08:08:28] 2025-11-22 13:07:53,975 | INFO     | 
[2025-11-22 08:08:28] 2025-11-22 13:07:53,975 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-22 08:08:28] 2025-11-22 13:07:54,038 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 08:08:28] 2025-11-22 13:07:54,038 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 08:08:28] 2025-11-22 13:07:54,038 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 08:08:28] 2025-11-22 13:07:54,038 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 08:08:28] 2025-11-22 13:07:54,038 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 08:08:28] 2025-11-22 13:07:54,039 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 08:08:28] 2025-11-22 13:07:54,039 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 08:08:28] 2025-11-22 13:07:54,039 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 08:08:28] 2025-11-22 13:07:54,039 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 08:08:28] 2025-11-22 13:07:54,039 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 08:08:28] 2025-11-22 13:07:54,039 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 08:08:28] 2025-11-22 13:07:54,039 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 08:08:28] 2025-11-22 13:07:54,039 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 08:08:28] 2025-11-22 13:07:54,040 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 08:08:28] 2025-11-22 13:07:54,040 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 08:08:28] 2025-11-22 13:07:54,040 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 08:08:28] 2025-11-22 13:07:54,040 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 08:08:28] 2025-11-22 13:07:54,040 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 08:08:28] 2025-11-22 13:07:54,040 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 08:08:28] 2025-11-22 13:07:54,040 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 08:08:28] 2025-11-22 13:07:54,041 | INFO     | job 6893850243 has completed (purged errors)
[2025-11-22 08:08:28] 2025-11-22 13:07:54,041 | INFO     | overall cleanup function is called
[2025-11-22 08:08:28] 2025-11-22 13:07:55,168 | INFO     | --- collectZombieJob: --- 10, [3285960]
[2025-11-22 08:08:28] 2025-11-22 13:07:55,169 | INFO     | zombie collector waiting for pid 3285960
[2025-11-22 08:08:28] 2025-11-22 13:07:55,169 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 08:08:28] 2025-11-22 13:07:55,169 | INFO     | collected zombie processes
[2025-11-22 08:08:28] 2025-11-22 13:07:55,169 | INFO     | will attempt to kill all subprocesses of pid=3285960
[2025-11-22 08:08:28] 2025-11-22 13:07:55,721 | INFO     | process IDs to be killed: [3285960] (in reverse order)
[2025-11-22 08:08:28] 2025-11-22 13:07:55,827 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 08:08:28] 2025-11-22 13:07:55,827 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 08:08:28] 2025-11-22 13:07:55,842 | INFO     | did not find any defunct processes belonging to 3285960
[2025-11-22 08:08:28] 2025-11-22 13:07:55,867 | INFO     | did not find any defunct processes belonging to 3285960
[2025-11-22 08:08:28] 2025-11-22 13:07:55,873 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 08:08:28] 2025-11-22 13:07:55,873 | INFO     | ready for new job
[2025-11-22 08:08:28] 2025-11-22 13:07:55,873 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 08:08:28] 2025-11-22 13:07:55,885 | INFO     | ***************************************
[2025-11-22 08:08:28] 2025-11-22 13:07:55,886 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 08:08:28] 2025-11-22 13:07:55,886 | INFO     | ***************************************
[2025-11-22 08:08:28] 2025-11-22 13:07:55,886 | INFO     | 
[2025-11-22 08:08:28] 2025-11-22 13:07:55,889 | INFO     | architecture information:
[2025-11-22 08:08:28] 2025-11-22 13:07:55,889 | INFO     | executing command: cat /etc/os-release
[2025-11-22 08:08:28] 2025-11-22 13:07:55,920 | INFO     | cat /etc/os-release:
[2025-11-22 08:08:28] NAME="CentOS Linux"
[2025-11-22 08:08:28] VERSION="7 (Core)"
[2025-11-22 08:08:28] ID="centos"
[2025-11-22 08:08:28] ID_LIKE="rhel fedora"
[2025-11-22 08:08:28] VERSION_ID="7"
[2025-11-22 08:08:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 08:08:28] ANSI_COLOR="0;31"
[2025-11-22 08:08:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 08:08:28] HOME_URL="https://www.centos.org/"
[2025-11-22 08:08:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 08:08:28] 
[2025-11-22 08:08:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 08:08:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 08:08:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 08:08:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 08:08:28] 
[2025-11-22 08:08:28] 2025-11-22 13:07:55,921 | INFO     | ***************************************
[2025-11-22 08:08:28] 2025-11-22 13:07:56,425 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-22 08:08:28] 2025-11-22 13:07:56,471 | INFO     | sufficient remaining disk space (60749250560 B)
[2025-11-22 08:08:28] 2025-11-22 13:07:56,472 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 08:08:28] 2025-11-22 13:07:56,472 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 08:08:28] 2025-11-22 13:07:56,472 | INFO     | update_server=False
[2025-11-22 08:08:28] 2025-11-22 13:07:56,472 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 08:08:28] 2025-11-22 13:07:56,474 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 08:08:28] 2025-11-22 13:07:56,475 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 08:08:28] 2025-11-22 13:07:56,783 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 08:08:28] 2025-11-22 13:07:56,784 | INFO     | aborting loop
[2025-11-22 08:08:28] 2025-11-22 13:07:57,399 | INFO     | all data control threads have been joined
[2025-11-22 08:08:28] 2025-11-22 13:07:57,479 | INFO     | [job] retrieve thread has finished
[2025-11-22 08:08:28] 2025-11-22 13:07:57,503 | INFO     | all job control threads have been joined
[2025-11-22 08:08:28] 2025-11-22 13:07:57,567 | INFO     | [job] validate thread has finished
[2025-11-22 08:08:28] 2025-11-22 13:07:57,574 | INFO     | [data] copytool_in thread has finished
[2025-11-22 08:08:28] 2025-11-22 13:07:57,659 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 08:08:28] 2025-11-22 13:07:57,686 | INFO     | all payload control threads have been joined
[2025-11-22 08:08:28] 2025-11-22 13:07:57,789 | INFO     | [job] job monitor thread has finished
[2025-11-22 08:08:28] 2025-11-22 13:07:58,366 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 08:08:28] 2025-11-22 13:07:58,407 | INFO     | [data] control thread has finished
[2025-11-22 08:08:28] 2025-11-22 13:07:58,481 | INFO     | [data] copytool_out thread has finished
[2025-11-22 08:08:28] 2025-11-22 13:07:58,509 | INFO     | [job] control thread has finished
[2025-11-22 08:08:28] 2025-11-22 13:07:58,616 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 08:08:28] 2025-11-22 13:07:58,693 | INFO     | [payload] control thread has finished
[2025-11-22 08:08:28] 2025-11-22 13:07:58,735 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 08:08:28] 2025-11-22 13:07:58,762 | INFO     | [payload] failed_post thread has finished
[2025-11-22 08:08:28] 2025-11-22 13:07:58,783 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 08:08:28] 2025-11-22 13:07:58,838 | INFO     | [payload] validate_post thread has finished
[2025-11-22 08:08:28] 2025-11-22 13:07:59,622 | INFO     | [job] queue monitor thread has finished
[2025-11-22 08:08:28] 2025-11-22 13:08:00,483 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 08:08:28] 2025-11-22 13:08:04,478 | INFO     | [monitor] cgroup control has ended
[2025-11-22 08:08:28] 2025-11-22 13:08:06,137 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140307794782016)>', '<ExcThread(monitor, started 140307286963968)>']
[2025-11-22 08:08:28] 2025-11-22 13:08:11,163 | INFO     | all workflow threads have been joined
[2025-11-22 08:08:28] 2025-11-22 13:08:11,164 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 08:08:28] 2025-11-22 13:08:11,164 | INFO     | traces error code: 0
[2025-11-22 08:08:28] 2025-11-22 13:08:11,164 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 08:08:28] 2025-11-22 13:08:27,516 | INFO     | PID=3278072 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 08:08:28] 2025-11-22 13:08:27,518 | INFO     | .. there are 14 such processes running
[2025-11-22 08:08:28] 2025-11-22 13:08:27,518 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 08:08:28] 2025-11-22 13:08:27,519 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 08:08:28] 2025-11-22 13:08:27,519 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 08:08:28] 2025-11-22 13:08:27,519 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 08:08:28] 2025-11-22 13:08:27,519 | INFO     | [monitor] control thread has ended
[2025-11-22 08:08:28] 2025-11-22 13:08:27,720 [wrapper] ==== pilot stdout END ====
[2025-11-22 08:08:28] 2025-11-22 13:08:27,749 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 08:08:28] 2025-11-22 13:08:27,759 [wrapper] pilotpid: 3278072
[2025-11-22 08:08:28] 2025-11-22 13:08:27,788 [wrapper] Pilot exit status: 0
[2025-11-22 08:08:28] 2025-11-22 13:08:27,829 [wrapper] pandaids: 6893850243
[2025-11-22 08:08:28] 2025-11-22 13:08:27,966 [wrapper] cleanup supervisor_pilot 2500115 3278073
[2025-11-22 08:08:28] 2025-11-22 13:08:27,977 [wrapper] Test setup, not cleaning
[2025-11-22 08:08:28] 2025-11-22 13:08:27,986 [wrapper] apfmon messages muted
[2025-11-22 08:08:28] 2025-11-22 13:08:27,989 [wrapper] ==== wrapper stdout END ====
[2025-11-22 08:08:28] 2025-11-22 13:08:28,020 [wrapper] ==== wrapper stderr END ====
[2025-11-22 08:08:28]  *** Error codes and diagnostics ***
[2025-11-22 08:08:28]     "exeErrorCode": 0,
[2025-11-22 08:08:28]     "exeErrorDiag": "",
[2025-11-22 08:08:28]     "pilotErrorCode": 0,
[2025-11-22 08:08:28]     "pilotErrorDiag": "",
[2025-11-22 08:08:28]  *** Listing of results directory ***
[2025-11-22 08:08:28] total 1327752
[2025-11-22 08:08:28] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 06:09 pilot3.tar.gz
[2025-11-22 08:08:28] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 06:17 queuedata.json
[2025-11-22 08:08:28] -rwx------. 1 boincer umatlas     36292 Nov 20 06:17 runpilot2-wrapper.sh
[2025-11-22 08:08:28] -rw-r--r--. 1 boincer umatlas       100 Nov 20 23:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 08:08:28] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 20 23:20 run_atlas
[2025-11-22 08:08:28] -rw-r--r--. 1 boincer umatlas       105 Nov 20 23:20 job.xml
[2025-11-22 08:08:28] -rw-r--r--. 2 boincer umatlas 408783623 Nov 20 23:20 EVNT.47493127._000323.pool.root.1
[2025-11-22 08:08:28] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 23:20 start_atlas.sh
[2025-11-22 08:08:28] drwxrwx--x. 2 boincer umatlas      4096 Nov 20 23:20 shared
[2025-11-22 08:08:28] -rw-r--r--. 2 boincer umatlas    590103 Nov 20 23:20 input.tar.gz
[2025-11-22 08:08:28] -rw-r--r--. 1 boincer umatlas         0 Nov 20 23:20 boinc_lockfile
[2025-11-22 08:08:28] -rw-r--r--. 1 boincer umatlas      2786 Nov 20 23:20 pandaJob.out
[2025-11-22 08:08:28] -rw-------. 1 boincer umatlas        57 Nov 20 23:20 setup.sh.local
[2025-11-22 08:08:28] -rw-------. 1 boincer umatlas    989817 Nov 20 23:21 agis_schedconf.cvmfs.json
[2025-11-22 08:08:28] drwx------. 5 boincer umatlas      4096 Nov 20 23:21 pilot3
[2025-11-22 08:08:28] -rw-r--r--. 1 boincer umatlas       533 Nov 22 07:49 boinc_task_state.xml
[2025-11-22 08:08:28] -rw-r--r--. 1 boincer umatlas      6616 Nov 22 08:00 init_data.xml
[2025-11-22 08:08:28] -rw-------. 1 boincer umatlas 910945688 Nov 22 08:06 HITS.47523449._003225.pool.root.1
[2025-11-22 08:08:28] -rw-------. 1 boincer umatlas      1058 Nov 22 08:07 memory_monitor_summary.json
[2025-11-22 08:08:28] -rw-------. 1 boincer umatlas   1526164 Nov 22 08:07 agis_ddmendpoints.agis.ALL.json
[2025-11-22 08:08:28] -rw-------. 1 boincer umatlas   2825528 Nov 22 08:07 log.47523449._003225.job.log.tgz.1
[2025-11-22 08:08:28] -rw-------. 1 boincer umatlas      8622 Nov 22 08:07 heartbeat.json
[2025-11-22 08:08:28] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 08:08 boinc_mmap_file
[2025-11-22 08:08:28] -rw-r--r--. 1 boincer umatlas        29 Nov 22 08:08 wrapper_checkpoint.txt
[2025-11-22 08:08:28] -rw-------. 1 boincer umatlas        95 Nov 22 08:08 pilot_heartbeat.json
[2025-11-22 08:08:28] -rw-------. 1 boincer umatlas       823 Nov 22 08:08 pilotlog.txt
[2025-11-22 08:08:28] -rw-------. 1 boincer umatlas  15161411 Nov 22 08:08 log.47523449._003225.job.log.1
[2025-11-22 08:08:28] -rw-------. 1 boincer umatlas       353 Nov 22 08:08 output.list
[2025-11-22 08:08:28] -rw-r--r--. 1 boincer umatlas       620 Nov 22 08:08 runtime_log
[2025-11-22 08:08:28] -rw-------. 1 boincer umatlas  18001920 Nov 22 08:08 result.tar.gz
[2025-11-22 08:08:28] -rw-r--r--. 1 boincer umatlas      9344 Nov 22 08:08 runtime_log.err
[2025-11-22 08:08:28] -rw-------. 1 boincer umatlas       663 Nov 22 08:08 99qLDmhqHg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm6bHKDmcnNp1m.diag
[2025-11-22 08:08:28] -rw-r--r--. 1 boincer umatlas     21622 Nov 22 08:08 stderr.txt
[2025-11-22 08:08:28] HITS file was successfully produced:
[2025-11-22 08:08:28] -rw-------. 1 boincer umatlas 910945688 Nov 22 08:06 shared/HITS.pool.root.1
[2025-11-22 08:08:28]  *** Contents of shared directory: ***
[2025-11-22 08:08:28] total 1306984
[2025-11-22 08:08:28] -rw-r--r--. 2 boincer umatlas 408783623 Nov 20 23:20 ATLAS.root_0
[2025-11-22 08:08:28] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 23:20 start_atlas.sh
[2025-11-22 08:08:28] -rw-r--r--. 2 boincer umatlas    590103 Nov 20 23:20 input.tar.gz
[2025-11-22 08:08:28] -rw-------. 1 boincer umatlas 910945688 Nov 22 08:06 HITS.pool.root.1
[2025-11-22 08:08:28] -rw-------. 1 boincer umatlas  18001920 Nov 22 08:08 result.tar.gz
08:08:30 (3272788): run_atlas exited; CPU time 324127.915191
08:08:30 (3272788): called boinc_finish(0)

</stderr_txt>
]]>

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