Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:45:18 (2382714): wrapper (7.7.26015): starting
19:45:18 (2382714): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 19:45:18] Arguments: --nthreads 8
[2025-11-20 19:45:18] Threads: 8
[2025-11-20 19:45:18] Checking for CVMFS
[2025-11-20 19:45:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 19:45:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 19:45:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 19:45:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 19:45:19] 2.13.2.0 5239 25835 168912 153102 0 140 25416783 39288833 6136 16776704 0 13985026 99.644 12374691 34281 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 19:45:19] CVMFS is ok
[2025-11-20 19:45:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 19:45:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 19:45:19] Further information can be found at the LHC@home message board.
[2025-11-20 19:45:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 19:45:19] Checking for apptainer binary...
[2025-11-20 19:45:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 19:45:19] Running /usr/bin/apptainer --version
[2025-11-20 19:45:19] apptainer version 1.4.4-1.el9
[2025-11-20 19:45:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 19:45:19] c-210-6.aglt2.org
[2025-11-20 19:45:19] apptainer works
[2025-11-20 19:45:20] Set ATHENA_PROC_NUMBER=8
[2025-11-20 19:45:20] Set ATHENA_CORE_NUMBER=8
[2025-11-20 19:45:20] Starting ATLAS job with PandaID=6893850883
[2025-11-20 19:45:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 12:57:36]  *** The last 200 lines of the pilot log: ***
[2025-11-21 12:57:36] 2025-11-21 17:56:53,737 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 12:57:36] 2025-11-21 17:56:53,737 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 12:57:36] 2025-11-21 17:56:53,758 | INFO     | fitting pss+swap vs Time
[2025-11-21 12:57:36] 2025-11-21 17:56:53,760 | INFO     | sum of square deviations: 323265048597.3976
[2025-11-21 12:57:36] 2025-11-21 17:56:53,785 | INFO     | sum of deviations: 2304958537642.7153
[2025-11-21 12:57:36] 2025-11-21 17:56:53,786 | INFO     | mean x: 1763716884.781065
[2025-11-21 12:57:36] 2025-11-21 17:56:53,786 | INFO     | mean y: 2887507.818540434
[2025-11-21 12:57:36] 2025-11-21 17:56:53,787 | INFO     | intersect: -12572843488.153587
[2025-11-21 12:57:36] 2025-11-21 17:56:53,789 | INFO     | chi2: 11.420670825457332
[2025-11-21 12:57:36] 2025-11-21 17:56:53,790 | INFO     | sum of square deviations: 318506592766.65027
[2025-11-21 12:57:36] 2025-11-21 17:56:53,829 | INFO     | sum of deviations: 2657736109888.8623
[2025-11-21 12:57:36] 2025-11-21 17:56:53,830 | INFO     | mean x: 1763716732.2874134
[2025-11-21 12:57:36] 2025-11-21 17:56:53,830 | INFO     | mean y: 2898811.917740337
[2025-11-21 12:57:36] 2025-11-21 17:56:53,830 | INFO     | intersect: -14714202037.701653
[2025-11-21 12:57:36] 2025-11-21 17:56:53,832 | INFO     | chi2: 7.998790019831262
[2025-11-21 12:57:36] 2025-11-21 17:56:53,832 | INFO     | current chi2=7.998790019831262 (change=29.96216998040519 %)
[2025-11-21 12:57:36] 2025-11-21 17:56:53,834 | INFO     | sum of square deviations: 313795068048.32214
[2025-11-21 12:57:36] 2025-11-21 17:56:53,863 | INFO     | sum of deviations: 2999701003630.8784
[2025-11-21 12:57:36] 2025-11-21 17:56:53,863 | INFO     | mean x: 1763716579.7938247
[2025-11-21 12:57:36] 2025-11-21 17:56:53,863 | INFO     | mean y: 2909875.076693227
[2025-11-21 12:57:36] 2025-11-21 17:56:53,863 | INFO     | intersect: -16857209780.192202
[2025-11-21 12:57:36] 2025-11-21 17:56:53,865 | INFO     | chi2: 4.720388934891562
[2025-11-21 12:57:36] 2025-11-21 17:56:53,865 | INFO     | current chi2=4.720388934891562 (change=40.98621262480471 %)
[2025-11-21 12:57:36] 2025-11-21 17:56:53,867 | INFO     | sum of square deviations: 309130180881.50836
[2025-11-21 12:57:36] 2025-11-21 17:56:53,892 | INFO     | sum of deviations: 3073867898274.955
[2025-11-21 12:57:36] 2025-11-21 17:56:53,892 | INFO     | mean x: 1763716427.2992992
[2025-11-21 12:57:36] 2025-11-21 17:56:53,893 | INFO     | mean y: 2912295.3613613616
[2025-11-21 12:57:36] 2025-11-21 17:56:53,893 | INFO     | intersect: -17534784257.190975
[2025-11-21 12:57:36] 2025-11-21 17:56:53,894 | INFO     | chi2: 4.384990673723354
[2025-11-21 12:57:36] 2025-11-21 17:56:53,895 | INFO     | current chi2=4.384990673723354 (change=7.105309875825165 %)
[2025-11-21 12:57:36] 2025-11-21 17:56:53,895 | INFO     | right removable region: 998
[2025-11-21 12:57:36] 2025-11-21 17:56:53,896 | INFO     | sum of square deviations: 318505800376.6502
[2025-11-21 12:57:36] 2025-11-21 17:56:53,930 | INFO     | sum of deviations: 1929693758974.2537
[2025-11-21 12:57:36] 2025-11-21 17:56:53,930 | INFO     | mean x: 1763717037.2874134
[2025-11-21 12:57:36] 2025-11-21 17:56:53,930 | INFO     | mean y: 2899529.350842418
[2025-11-21 12:57:36] 2025-11-21 17:56:53,930 | INFO     | intersect: -10682726149.758738
[2025-11-21 12:57:36] 2025-11-21 17:56:53,932 | INFO     | chi2: 7.973450996210885
[2025-11-21 12:57:36] 2025-11-21 17:56:53,932 | INFO     | current chi2=7.973450996210885 (change=30.184039816316183 %)
[2025-11-21 12:57:36] 2025-11-21 17:56:53,933 | INFO     | sum of square deviations: 313793544696.90845
[2025-11-21 12:57:36] 2025-11-21 17:56:53,978 | INFO     | sum of deviations: 1767167370820.329
[2025-11-21 12:57:36] 2025-11-21 17:56:53,978 | INFO     | mean x: 1763717189.7928288
[2025-11-21 12:57:36] 2025-11-21 17:56:53,979 | INFO     | mean y: 2904782.823705179
[2025-11-21 12:57:36] 2025-11-21 17:56:53,979 | INFO     | intersect: -9929687910.143568
[2025-11-21 12:57:36] 2025-11-21 17:56:53,980 | INFO     | chi2: 7.329123815305786
[2025-11-21 12:57:36] 2025-11-21 17:56:53,980 | INFO     | current chi2=7.329123815305786 (change=8.080907266016863 %)
[2025-11-21 12:57:36] 2025-11-21 17:56:53,981 | INFO     | left removable region: 20
[2025-11-21 12:57:36] 2025-11-21 17:56:53,982 | INFO     | sum of square deviations: 290039865924.3272
[2025-11-21 12:57:36] 2025-11-21 17:56:54,006 | INFO     | sum of deviations: 2427866707667.94
[2025-11-21 12:57:36] 2025-11-21 17:56:54,006 | INFO     | mean x: 1763717006.820041
[2025-11-21 12:57:36] 2025-11-21 17:56:54,006 | INFO     | mean y: 2934163.982617587
[2025-11-21 12:57:36] 2025-11-21 17:56:54,006 | INFO     | intersect: -14760794225.422096
[2025-11-21 12:57:36] 2025-11-21 17:56:54,008 | INFO     | chi2: 0.16784294885951961
[2025-11-21 12:57:36] 2025-11-21 17:56:54,008 | INFO     | current memory leak: 8.37 B/s (using 978 data points, chi2=0.17)
[2025-11-21 12:57:36] 2025-11-21 17:56:54,011 | INFO     | could have reported an average CPU frequency of 2600 MHz (37 samples)
[2025-11-21 12:57:36] 2025-11-21 17:56:54,012 | INFO     | ..............................
[2025-11-21 12:57:36] 2025-11-21 17:56:54,012 | INFO     | . Timing measurements:
[2025-11-21 12:57:36] 2025-11-21 17:56:54,012 | INFO     | . get job = 0 s
[2025-11-21 12:57:36] 2025-11-21 17:56:54,012 | INFO     | . initial setup = 4 s
[2025-11-21 12:57:36] 2025-11-21 17:56:54,012 | INFO     | . payload setup = 12 s
[2025-11-21 12:57:36] 2025-11-21 17:56:54,012 | INFO     | . stage-in = 0 s
[2025-11-21 12:57:36] 2025-11-21 17:56:54,012 | INFO     | . payload execution = 61808 s
[2025-11-21 12:57:36] 2025-11-21 17:56:54,012 | INFO     | . stage-out = 7 s
[2025-11-21 12:57:36] 2025-11-21 17:56:54,012 | INFO     | . log creation = 2 s
[2025-11-21 12:57:36] 2025-11-21 17:56:54,013 | INFO     | ..............................
[2025-11-21 12:57:36] 2025-11-21 17:56:54,188 | INFO     | 
[2025-11-21 12:57:36] 2025-11-21 17:56:54,188 | INFO     | job summary report
[2025-11-21 12:57:36] 2025-11-21 17:56:54,188 | INFO     | --------------------------------------------------
[2025-11-21 12:57:36] 2025-11-21 17:56:54,189 | INFO     | PanDA job id: 6893850883
[2025-11-21 12:57:36] 2025-11-21 17:56:54,189 | INFO     | task id: 47523449
[2025-11-21 12:57:36] 2025-11-21 17:56:54,189 | INFO     | errors: (none)
[2025-11-21 12:57:36] 2025-11-21 17:56:54,189 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 12:57:36] 2025-11-21 17:56:54,189 | INFO     | pilot state: finished 
[2025-11-21 12:57:36] 2025-11-21 17:56:54,189 | INFO     | transexitcode: 0
[2025-11-21 12:57:36] 2025-11-21 17:56:54,189 | INFO     | exeerrorcode: 0
[2025-11-21 12:57:36] 2025-11-21 17:56:54,189 | INFO     | exeerrordiag: 
[2025-11-21 12:57:36] 2025-11-21 17:56:54,189 | INFO     | exitcode: 0
[2025-11-21 12:57:36] 2025-11-21 17:56:54,190 | INFO     | exitmsg: OK
[2025-11-21 12:57:36] 2025-11-21 17:56:54,190 | INFO     | cpuconsumptiontime: 298745 s
[2025-11-21 12:57:36] 2025-11-21 17:56:54,190 | INFO     | nevents: 1000
[2025-11-21 12:57:36] 2025-11-21 17:56:54,190 | INFO     | neventsw: 0
[2025-11-21 12:57:36] 2025-11-21 17:56:54,190 | INFO     | pid: 2393062
[2025-11-21 12:57:36] 2025-11-21 17:56:54,190 | INFO     | pgrp: 2393062
[2025-11-21 12:57:36] 2025-11-21 17:56:54,190 | INFO     | corecount: 8
[2025-11-21 12:57:36] 2025-11-21 17:56:54,190 | INFO     | event service: False
[2025-11-21 12:57:36] 2025-11-21 17:56:54,190 | INFO     | sizes: {0: 2298756, 1: 2298756, 9: 2299046, 12: 2299074, 61824: 2353323, 61832: 2362317, 61833: 2362501, 61850: 2362747}
[2025-11-21 12:57:36] 2025-11-21 17:56:54,191 | INFO     | --------------------------------------------------
[2025-11-21 12:57:36] 2025-11-21 17:56:54,191 | INFO     | 
[2025-11-21 12:57:36] 2025-11-21 17:56:54,191 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-21 12:57:36] 2025-11-21 17:56:54,238 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 12:57:36] 2025-11-21 17:56:54,239 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 12:57:36] 2025-11-21 17:56:54,239 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 12:57:36] 2025-11-21 17:56:54,239 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 12:57:36] 2025-11-21 17:56:54,239 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 12:57:36] 2025-11-21 17:56:54,239 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 12:57:36] 2025-11-21 17:56:54,239 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 12:57:36] 2025-11-21 17:56:54,239 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 12:57:36] 2025-11-21 17:56:54,239 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 12:57:36] 2025-11-21 17:56:54,240 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 12:57:36] 2025-11-21 17:56:54,240 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 12:57:36] 2025-11-21 17:56:54,240 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 12:57:36] 2025-11-21 17:56:54,240 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 12:57:36] 2025-11-21 17:56:54,240 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 12:57:36] 2025-11-21 17:56:54,240 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 12:57:36] 2025-11-21 17:56:54,240 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 12:57:36] 2025-11-21 17:56:54,240 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 12:57:36] 2025-11-21 17:56:54,241 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 12:57:36] 2025-11-21 17:56:54,241 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 12:57:36] 2025-11-21 17:56:54,241 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 12:57:36] 2025-11-21 17:56:54,241 | INFO     | job 6893850883 has completed (purged errors)
[2025-11-21 12:57:36] 2025-11-21 17:56:54,241 | INFO     | overall cleanup function is called
[2025-11-21 12:57:36] 2025-11-21 17:56:55,271 | INFO     | --- collectZombieJob: --- 10, [2393062]
[2025-11-21 12:57:36] 2025-11-21 17:56:55,271 | INFO     | zombie collector waiting for pid 2393062
[2025-11-21 12:57:36] 2025-11-21 17:56:55,271 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 12:57:36] 2025-11-21 17:56:55,271 | INFO     | collected zombie processes
[2025-11-21 12:57:36] 2025-11-21 17:56:55,271 | INFO     | will attempt to kill all subprocesses of pid=2393062
[2025-11-21 12:57:36] 2025-11-21 17:56:55,581 | INFO     | process IDs to be killed: [2393062] (in reverse order)
[2025-11-21 12:57:36] 2025-11-21 17:56:55,727 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 12:57:36] 2025-11-21 17:56:55,728 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 12:57:36] 2025-11-21 17:56:55,740 | INFO     | did not find any defunct processes belonging to 2393062
[2025-11-21 12:57:36] 2025-11-21 17:56:55,751 | INFO     | did not find any defunct processes belonging to 2393062
[2025-11-21 12:57:36] 2025-11-21 17:56:55,754 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 12:57:36] 2025-11-21 17:56:55,758 | INFO     | ready for new job
[2025-11-21 12:57:36] 2025-11-21 17:56:55,759 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 12:57:36] 2025-11-21 17:56:55,772 | INFO     | ***************************************
[2025-11-21 12:57:36] 2025-11-21 17:56:55,772 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 12:57:36] 2025-11-21 17:56:55,776 | INFO     | ***************************************
[2025-11-21 12:57:36] 2025-11-21 17:56:55,776 | INFO     | 
[2025-11-21 12:57:36] 2025-11-21 17:56:55,778 | INFO     | architecture information:
[2025-11-21 12:57:36] 2025-11-21 17:56:55,782 | INFO     | executing command: cat /etc/os-release
[2025-11-21 12:57:36] 2025-11-21 17:56:55,814 | INFO     | cat /etc/os-release:
[2025-11-21 12:57:36] NAME="CentOS Linux"
[2025-11-21 12:57:36] VERSION="7 (Core)"
[2025-11-21 12:57:36] ID="centos"
[2025-11-21 12:57:36] ID_LIKE="rhel fedora"
[2025-11-21 12:57:36] VERSION_ID="7"
[2025-11-21 12:57:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 12:57:36] ANSI_COLOR="0;31"
[2025-11-21 12:57:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 12:57:36] HOME_URL="https://www.centos.org/"
[2025-11-21 12:57:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 12:57:36] 
[2025-11-21 12:57:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 12:57:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 12:57:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 12:57:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 12:57:36] 
[2025-11-21 12:57:36] 2025-11-21 17:56:55,815 | INFO     | ***************************************
[2025-11-21 12:57:36] 2025-11-21 17:56:56,318 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-21 12:57:36] 2025-11-21 17:56:56,379 | INFO     | sufficient remaining disk space (48519708672 B)
[2025-11-21 12:57:36] 2025-11-21 17:56:56,380 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 12:57:36] 2025-11-21 17:56:56,380 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 12:57:36] 2025-11-21 17:56:56,380 | INFO     | update_server=False
[2025-11-21 12:57:36] 2025-11-21 17:56:56,380 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 12:57:36] 2025-11-21 17:56:56,382 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 12:57:36] 2025-11-21 17:56:56,382 | INFO     | aborting loop
[2025-11-21 12:57:36] 2025-11-21 17:56:56,495 | INFO     | all payload control threads have been joined
[2025-11-21 12:57:36] 2025-11-21 17:56:56,570 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 12:57:36] 2025-11-21 17:56:56,857 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 12:57:36] 2025-11-21 17:56:57,357 | INFO     | all data control threads have been joined
[2025-11-21 12:57:36] 2025-11-21 17:56:57,386 | INFO     | [job] retrieve thread has finished
[2025-11-21 12:57:36] 2025-11-21 17:56:57,388 | INFO     | [job] job monitor thread has finished
[2025-11-21 12:57:36] 2025-11-21 17:56:57,497 | INFO     | [payload] validate_post thread has finished
[2025-11-21 12:57:36] 2025-11-21 17:56:57,501 | INFO     | [payload] control thread has finished
[2025-11-21 12:57:36] 2025-11-21 17:56:57,639 | INFO     | [data] copytool_in thread has finished
[2025-11-21 12:57:36] 2025-11-21 17:56:57,641 | INFO     | [job] validate thread has finished
[2025-11-21 12:57:36] 2025-11-21 17:56:57,733 | INFO     | all job control threads have been joined
[2025-11-21 12:57:36] 2025-11-21 17:56:57,852 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 12:57:36] 2025-11-21 17:56:57,852 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 12:57:36] 2025-11-21 17:56:57,873 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 12:57:36] 2025-11-21 17:56:58,193 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 12:57:36] 2025-11-21 17:56:58,362 | INFO     | [data] control thread has finished
[2025-11-21 12:57:36] 2025-11-21 17:56:58,600 | INFO     | [data] copytool_out thread has finished
[2025-11-21 12:57:36] 2025-11-21 17:56:58,739 | INFO     | [job] control thread has finished
[2025-11-21 12:57:36] 2025-11-21 17:56:58,778 | INFO     | [payload] failed_post thread has finished
[2025-11-21 12:57:36] 2025-11-21 17:56:59,203 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 12:57:36] 2025-11-21 17:57:00,214 | INFO     | [job] queue monitor thread has finished
[2025-11-21 12:57:36] 2025-11-21 17:57:00,865 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 12:57:36] 2025-11-21 17:57:26,816 | INFO     | PID=2386672 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 12:57:36] 2025-11-21 17:57:26,817 | INFO     | .. there are 9 such processes running
[2025-11-21 12:57:36] 2025-11-21 17:57:26,817 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 12:57:36] 2025-11-21 17:57:26,817 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 12:57:36] 2025-11-21 17:57:26,817 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 12:57:36] 2025-11-21 17:57:28,340 | INFO     | [monitor] cgroup control has ended
[2025-11-21 12:57:36] 2025-11-21 17:57:29,915 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139854078293824)>', '<ExcThread(monitor, started 139853597505280)>']
[2025-11-21 12:57:36] 2025-11-21 17:57:30,839 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 12:57:36] 2025-11-21 17:57:30,839 | INFO     | [monitor] control thread has ended
[2025-11-21 12:57:36] 2025-11-21 17:57:34,942 | INFO     | all workflow threads have been joined
[2025-11-21 12:57:36] 2025-11-21 17:57:34,942 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 12:57:36] 2025-11-21 17:57:34,943 | INFO     | traces error code: 0
[2025-11-21 12:57:36] 2025-11-21 17:57:34,943 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 12:57:36] 2025-11-21 17:57:35,522 [wrapper] ==== pilot stdout END ====
[2025-11-21 12:57:36] 2025-11-21 17:57:35,542 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 12:57:36] 2025-11-21 17:57:35,559 [wrapper] pilotpid: 2386672
[2025-11-21 12:57:36] 2025-11-21 17:57:35,583 [wrapper] Pilot exit status: 0
[2025-11-21 12:57:36] 2025-11-21 17:57:35,688 [wrapper] pandaids: 6893850883
[2025-11-21 12:57:36] 2025-11-21 17:57:35,982 [wrapper] cleanup supervisor_pilot 3893158 2386673
[2025-11-21 12:57:36] 2025-11-21 17:57:35,986 [wrapper] Test setup, not cleaning
[2025-11-21 12:57:36] 2025-11-21 17:57:35,988 [wrapper] apfmon messages muted
[2025-11-21 12:57:36] 2025-11-21 17:57:35,991 [wrapper] ==== wrapper stdout END ====
[2025-11-21 12:57:36] 2025-11-21 17:57:35,994 [wrapper] ==== wrapper stderr END ====
[2025-11-21 12:57:36]  *** Error codes and diagnostics ***
[2025-11-21 12:57:36]     "exeErrorCode": 0,
[2025-11-21 12:57:36]     "exeErrorDiag": "",
[2025-11-21 12:57:36]     "pilotErrorCode": 0,
[2025-11-21 12:57:36]     "pilotErrorDiag": "",
[2025-11-21 12:57:36]  *** Listing of results directory ***
[2025-11-21 12:57:36] total 1325356
[2025-11-21 12:57:36] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 06:09 pilot3.tar.gz
[2025-11-21 12:57:36] -rwx------. 1 boincer umatlas     36292 Nov 20 06:32 runpilot2-wrapper.sh
[2025-11-21 12:57:36] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 06:32 queuedata.json
[2025-11-21 12:57:36] -rw-r--r--. 1 boincer umatlas       100 Nov 20 19:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 12:57:36] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 20 19:45 run_atlas
[2025-11-21 12:57:36] -rw-r--r--. 1 boincer umatlas       105 Nov 20 19:45 job.xml
[2025-11-21 12:57:36] -rw-r--r--. 2 boincer umatlas 412076547 Nov 20 19:45 EVNT.47493127._000348.pool.root.1
[2025-11-21 12:57:36] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 19:45 start_atlas.sh
[2025-11-21 12:57:36] drwxrwx--x. 2 boincer umatlas      4096 Nov 20 19:45 shared
[2025-11-21 12:57:36] -rw-r--r--. 2 boincer umatlas    590098 Nov 20 19:45 input.tar.gz
[2025-11-21 12:57:36] -rw-r--r--. 1 boincer umatlas         0 Nov 20 19:45 boinc_lockfile
[2025-11-21 12:57:36] -rw-r--r--. 1 boincer umatlas      2785 Nov 20 19:45 pandaJob.out
[2025-11-21 12:57:36] -rw-------. 1 boincer umatlas        57 Nov 20 19:45 setup.sh.local
[2025-11-21 12:57:36] -rw-------. 1 boincer umatlas    989817 Nov 20 19:45 agis_schedconf.cvmfs.json
[2025-11-21 12:57:36] drwx------. 5 boincer umatlas      4096 Nov 20 19:45 pilot3
[2025-11-21 12:57:36] -rw-r--r--. 1 boincer umatlas       533 Nov 21 12:39 boinc_task_state.xml
[2025-11-21 12:57:36] -rw-------. 1 boincer umatlas 919717568 Nov 21 12:55 HITS.47523449._003478.pool.root.1
[2025-11-21 12:57:36] -rw-------. 1 boincer umatlas      1055 Nov 21 12:56 memory_monitor_summary.json
[2025-11-21 12:57:36] -rw-------. 1 boincer umatlas        95 Nov 21 12:56 pilot_heartbeat.json
[2025-11-21 12:57:36] -rw-------. 1 boincer umatlas   1526164 Nov 21 12:56 agis_ddmendpoints.agis.ALL.json
[2025-11-21 12:57:36] -rw-------. 1 boincer umatlas   2194058 Nov 21 12:56 log.47523449._003478.job.log.tgz.1
[2025-11-21 12:57:36] -rw-------. 1 boincer umatlas      8621 Nov 21 12:56 heartbeat.json
[2025-11-21 12:57:36] -rw-r--r--. 1 boincer umatlas      6662 Nov 21 12:57 init_data.xml
[2025-11-21 12:57:36] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 12:57 boinc_mmap_file
[2025-11-21 12:57:36] -rw-r--r--. 1 boincer umatlas        29 Nov 21 12:57 wrapper_checkpoint.txt
[2025-11-21 12:57:36] -rw-------. 1 boincer umatlas      4823 Nov 21 12:57 pilotlog.txt
[2025-11-21 12:57:36] -rw-------. 1 boincer umatlas   8525826 Nov 21 12:57 log.47523449._003478.job.log.1
[2025-11-21 12:57:36] -rw-------. 1 boincer umatlas       353 Nov 21 12:57 output.list
[2025-11-21 12:57:36] -rw-r--r--. 1 boincer umatlas       620 Nov 21 12:57 runtime_log
[2025-11-21 12:57:36] -rw-------. 1 boincer umatlas  10741760 Nov 21 12:57 result.tar.gz
[2025-11-21 12:57:36] -rw-r--r--. 1 boincer umatlas      9338 Nov 21 12:57 runtime_log.err
[2025-11-21 12:57:36] -rw-------. 1 boincer umatlas       659 Nov 21 12:57 LS6KDms4Hg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDYGKDmffMQ7m.diag
[2025-11-21 12:57:36] -rw-r--r--. 1 boincer umatlas     21125 Nov 21 12:57 stderr.txt
[2025-11-21 12:57:36] HITS file was successfully produced:
[2025-11-21 12:57:36] -rw-------. 1 boincer umatlas 919717568 Nov 21 12:55 shared/HITS.pool.root.1
[2025-11-21 12:57:36]  *** Contents of shared directory: ***
[2025-11-21 12:57:36] total 1311680
[2025-11-21 12:57:36] -rw-r--r--. 2 boincer umatlas 412076547 Nov 20 19:45 ATLAS.root_0
[2025-11-21 12:57:36] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 19:45 start_atlas.sh
[2025-11-21 12:57:36] -rw-r--r--. 2 boincer umatlas    590098 Nov 20 19:45 input.tar.gz
[2025-11-21 12:57:36] -rw-------. 1 boincer umatlas 919717568 Nov 21 12:55 HITS.pool.root.1
[2025-11-21 12:57:36] -rw-------. 1 boincer umatlas  10741760 Nov 21 12:57 result.tar.gz
12:57:37 (2382714): run_atlas exited; CPU time 299519.595904
12:57:37 (2382714): called boinc_finish(0)

</stderr_txt>
]]>

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