Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:48:06 (2480570): wrapper (7.7.26015): starting
11:48:06 (2480570): wrapper: running run_atlas (--nthreads 3)
[2025-11-23 11:48:06] Arguments: --nthreads 3
[2025-11-23 11:48:06] Threads: 3
[2025-11-23 11:48:06] Checking for CVMFS
[2025-11-23 11:48:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 11:48:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 11:48:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 11:48:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 11:48:07] 2.9.2.0 1502042 7451 72104 153205 0 81 34941809 36864000 0 130560 0 2661268 99.801 521100 6620 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-23 11:48:07] CVMFS is ok
[2025-11-23 11:48:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 11:48:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 11:48:07] Further information can be found at the LHC@home message board.
[2025-11-23 11:48:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 11:48:07] Checking for apptainer binary...
[2025-11-23 11:48:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 11:48:07] Running /usr/bin/apptainer --version
[2025-11-23 11:48:07] apptainer version 1.4.1-1.1
[2025-11-23 11:48:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 11:48:07] atlasA223a
[2025-11-23 11:48:07] apptainer works
[2025-11-23 11:48:07] Set ATHENA_PROC_NUMBER=3
[2025-11-23 11:48:07] Set ATHENA_CORE_NUMBER=3
[2025-11-23 11:48:07] Starting ATLAS job with PandaID=6893850852
[2025-11-23 11:48:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 20:40:11]  *** The last 200 lines of the pilot log: ***
[2025-11-23 20:40:11] ID="centos"
[2025-11-23 20:40:11] ID_LIKE="rhel fedora"
[2025-11-23 20:40:11] VERSION_ID="7"
[2025-11-23 20:40:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 20:40:11] ANSI_COLOR="0;31"
[2025-11-23 20:40:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 20:40:11] HOME_URL="https://www.centos.org/"
[2025-11-23 20:40:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 20:40:11] 
[2025-11-23 20:40:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 20:40:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 20:40:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 20:40:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 20:40:11] 
[2025-11-23 20:40:11] 2025-11-23 19:39:40,438 | INFO     | ***************************************
[2025-11-23 20:40:11] 2025-11-23 19:39:40,942 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-23 20:40:11] 2025-11-23 19:39:40,955 | INFO     | sufficient remaining disk space (322060681216 B)
[2025-11-23 20:40:11] 2025-11-23 19:39:40,956 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 20:40:11] 2025-11-23 19:39:40,956 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 20:40:11] 2025-11-23 19:39:40,956 | INFO     | update_server=False
[2025-11-23 20:40:11] 2025-11-23 19:39:40,956 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 20:40:11] 2025-11-23 19:39:40,956 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 20:40:11] 2025-11-23 19:39:40,956 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 20:40:11] 2025-11-23 19:39:41,021 | INFO     | all job control threads have been joined
[2025-11-23 20:40:11] 2025-11-23 19:39:41,149 | INFO     | all payload control threads have been joined
[2025-11-23 20:40:11] 2025-11-23 19:39:41,160 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 20:40:11] 2025-11-23 19:39:41,405 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 20:40:11] 2025-11-23 19:39:41,406 | INFO     | aborting loop
[2025-11-23 20:40:11] 2025-11-23 19:39:41,961 | INFO     | [job] retrieve thread has finished
[2025-11-23 20:40:11] 2025-11-23 19:39:41,962 | INFO     | [job] queue monitor thread has finished
[2025-11-23 20:40:11] 2025-11-23 19:39:42,026 | INFO     | all data control threads have been joined
[2025-11-23 20:40:11] 2025-11-23 19:39:42,027 | INFO     | [job] control thread has finished
[2025-11-23 20:40:11] 2025-11-23 19:39:42,156 | INFO     | [payload] control thread has finished
[2025-11-23 20:40:11] 2025-11-23 19:39:42,186 | INFO     | [data] copytool_in thread has finished
[2025-11-23 20:40:11] 2025-11-23 19:39:42,271 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 20:40:11] 2025-11-23 19:39:42,412 | INFO     | [job] job monitor thread has finished
[2025-11-23 20:40:11] 2025-11-23 19:39:42,811 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 20:40:11] 2025-11-23 19:39:42,904 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 20:40:11] 2025-11-23 19:39:42,962 | INFO     | [data] copytool_out thread has finished
[2025-11-23 20:40:11] 2025-11-23 19:39:43,032 | INFO     | [data] control thread has finished
[2025-11-23 20:40:11] 2025-11-23 19:39:43,104 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 20:40:11] 2025-11-23 19:39:43,105 | INFO     | [payload] validate_post thread has finished
[2025-11-23 20:40:11] 2025-11-23 19:39:43,323 | INFO     | [job] validate thread has finished
[2025-11-23 20:40:11] 2025-11-23 19:39:43,452 | INFO     | [payload] failed_post thread has finished
[2025-11-23 20:40:11] 2025-11-23 19:39:45,167 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 20:40:11] 2025-11-23 19:40:02,667 | INFO     | [monitor] cgroup control has ended
[2025-11-23 20:40:11] 2025-11-23 19:40:03,715 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140662539892544)>', '<ExcThread(monitor, started 140662049597184)>']
[2025-11-23 20:40:11] 2025-11-23 19:40:08,741 | INFO     | all workflow threads have been joined
[2025-11-23 20:40:11] 2025-11-23 19:40:08,742 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 20:40:11] 2025-11-23 19:40:08,742 | INFO     | traces error code: 0
[2025-11-23 20:40:11] 2025-11-23 19:40:08,743 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 20:40:11] 2025-11-23 19:40:10,962 | INFO     | PID=2484297 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 20:40:11] 2025-11-23 19:40:10,962 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 20:40:11] 2025-11-23 19:40:10,962 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 20:40:11] 2025-11-23 19:40:10,962 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 20:40:11] 2025-11-23 19:40:10,962 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 20:40:11] 2025-11-23 19:40:10,962 | INFO     | [monitor] control thread has ended
[2025-11-23 20:40:11] 2025-11-23 19:40:11,006 [wrapper] ==== pilot stdout END ====
[2025-11-23 20:40:11] 2025-11-23 19:40:11,010 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 20:40:11] 2025-11-23 19:40:11,012 [wrapper] pilotpid: 2484297
[2025-11-23 20:40:11] 2025-11-23 19:40:11,015 [wrapper] Pilot exit status: 0
[2025-11-23 20:40:11] 2025-11-23 19:40:11,023 [wrapper] pandaids: 6893850852
[2025-11-23 20:40:11] 2025-11-23 19:40:11,040 [wrapper] cleanup supervisor_pilot 2548494 2484298
[2025-11-23 20:40:11] 2025-11-23 19:40:11,043 [wrapper] Test setup, not cleaning
[2025-11-23 20:40:11] 2025-11-23 19:40:11,045 [wrapper] apfmon messages muted
[2025-11-23 20:40:11] 2025-11-23 19:40:11,048 [wrapper] ==== wrapper stdout END ====
[2025-11-23 20:40:11] 2025-11-23 19:40:11,051 [wrapper] ==== wrapper stderr END ====
[2025-11-23 20:40:11]  *** Error codes and diagnostics ***
[2025-11-23 20:40:11]     "exeErrorCode": 0,
[2025-11-23 20:40:11]     "exeErrorDiag": "",
[2025-11-23 20:40:11]     "pilotErrorCode": 0,
[2025-11-23 20:40:11]     "pilotErrorDiag": "",
[2025-11-23 20:40:11]  *** Listing of results directory ***
[2025-11-23 20:40:11] total 1304136
[2025-11-23 20:40:11] -rw-r--r-- 1 boinc boinc    576529 Nov 20 12:09 pilot3.tar.gz
[2025-11-23 20:40:11] -rw-r--r-- 1 boinc boinc      5112 Nov 20 12:32 queuedata.json
[2025-11-23 20:40:11] -rwx------ 1 boinc boinc     36292 Nov 20 12:33 runpilot2-wrapper.sh
[2025-11-23 20:40:11] -rw-r--r-- 1 boinc boinc       100 Nov 23 11:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 20:40:11] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 11:48 run_atlas
[2025-11-23 20:40:11] -rw-r--r-- 1 boinc boinc       105 Nov 23 11:48 job.xml
[2025-11-23 20:40:11] -rw-r--r-- 2 boinc boinc 407706370 Nov 23 11:48 EVNT.47493127._000345.pool.root.1
[2025-11-23 20:40:11] drwxrwx--x 2 boinc boinc      4096 Nov 23 11:48 shared
[2025-11-23 20:40:11] -rw-r--r-- 2 boinc boinc    590105 Nov 23 11:48 input.tar.gz
[2025-11-23 20:40:11] -rw-r--r-- 2 boinc boinc     15847 Nov 23 11:48 start_atlas.sh
[2025-11-23 20:40:11] -rw-r--r-- 1 boinc boinc         0 Nov 23 11:48 boinc_setup_complete
[2025-11-23 20:40:11] -rw-r--r-- 1 boinc boinc      6198 Nov 23 11:48 init_data.xml
[2025-11-23 20:40:11] -rw-r--r-- 1 boinc boinc         0 Nov 23 11:48 boinc_lockfile
[2025-11-23 20:40:11] -rw-r--r-- 1 boinc boinc      2786 Nov 23 11:48 pandaJob.out
[2025-11-23 20:40:11] -rw------- 1 boinc boinc    989784 Nov 23 11:48 agis_schedconf.cvmfs.json
[2025-11-23 20:40:11] drwx------ 5 boinc boinc      4096 Nov 23 11:48 pilot3
[2025-11-23 20:40:11] -rw-r--r-- 1 boinc boinc       532 Nov 23 20:35 boinc_task_state.xml
[2025-11-23 20:40:11] -rw------- 1 boinc boinc 912450182 Nov 23 20:39 HITS.47523449._003447.pool.root.1
[2025-11-23 20:40:11] -rw------- 1 boinc boinc      1024 Nov 23 20:39 memory_monitor_summary.json
[2025-11-23 20:40:11] -rw------- 1 boinc boinc   1526164 Nov 23 20:39 agis_ddmendpoints.agis.ALL.json
[2025-11-23 20:40:11] -rw------- 1 boinc boinc   1201382 Nov 23 20:39 log.47523449._003447.job.log.tgz.1
[2025-11-23 20:40:11] -rw------- 1 boinc boinc      8567 Nov 23 20:39 heartbeat.json
[2025-11-23 20:40:11] -rw-r--r-- 1 boinc boinc      8192 Nov 23 20:39 boinc_mmap_file
[2025-11-23 20:40:11] -rw-r--r-- 1 boinc boinc        28 Nov 23 20:39 wrapper_checkpoint.txt
[2025-11-23 20:40:11] -rw------- 1 boinc boinc       747 Nov 23 20:40 pilotlog.txt
[2025-11-23 20:40:11] -rw------- 1 boinc boinc        95 Nov 23 20:40 pilot_heartbeat.json
[2025-11-23 20:40:11] -rw------- 1 boinc boinc   4483254 Nov 23 20:40 log.47523449._003447.job.log.1
[2025-11-23 20:40:11] -rw------- 1 boinc boinc       353 Nov 23 20:40 output.list
[2025-11-23 20:40:11] -rw-r--r-- 1 boinc boinc       620 Nov 23 20:40 runtime_log
[2025-11-23 20:40:11] -rw------- 1 boinc boinc   5703680 Nov 23 20:40 result.tar.gz
[2025-11-23 20:40:11] -rw-r--r-- 1 boinc boinc      8918 Nov 23 20:40 runtime_log.err
[2025-11-23 20:40:11] -rw------- 1 boinc boinc       669 Nov 23 20:40 pRtNDmb5Hg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmdHKDmX8hyQo.diag
[2025-11-23 20:40:11] -rw-r--r-- 1 boinc boinc      8628 Nov 23 20:40 stderr.txt
[2025-11-23 20:40:11] HITS file was successfully produced:
[2025-11-23 20:40:11] -rw------- 1 boinc boinc 912450182 Nov 23 20:39 shared/HITS.pool.root.1
[2025-11-23 20:40:11]  *** Contents of shared directory: ***
[2025-11-23 20:40:11] total 1295396
[2025-11-23 20:40:11] -rw-r--r-- 2 boinc boinc 407706370 Nov 23 11:48 ATLAS.root_0
[2025-11-23 20:40:11] -rw-r--r-- 2 boinc boinc    590105 Nov 23 11:48 input.tar.gz
[2025-11-23 20:40:11] -rw-r--r-- 2 boinc boinc     15847 Nov 23 11:48 start_atlas.sh
[2025-11-23 20:40:11] -rw------- 1 boinc boinc 912450182 Nov 23 20:39 HITS.pool.root.1
[2025-11-23 20:40:11] -rw------- 1 boinc boinc   5703680 Nov 23 20:40 result.tar.gz
20:40:12 (2480570): run_atlas exited; CPU time 94190.255687
20:40:12 (2480570): called boinc_finish(0)

</stderr_txt>
]]>

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