Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:23:10 (10260): wrapper (7.7.26015): starting
12:23:10 (10260): wrapper: running run_atlas (--nthreads 12)
[2025-11-20 12:23:10] Arguments: --nthreads 12
[2025-11-20 12:23:10] Threads: 12
[2025-11-20 12:23:10] Checking for CVMFS
[2025-11-20 12:23:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 12:23:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 12:23:10] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 12:23:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 12:23:10] 2.11.2.0 25590 180018 91088 153090 3 81 17840995 20275201 1 130560 2 95459012 99.967 7175980 26325 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 12:23:10] CVMFS is ok
[2025-11-20 12:23:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 12:23:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 12:23:10] Further information can be found at the LHC@home message board.
[2025-11-20 12:23:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 12:23:10] Checking for apptainer binary...
[2025-11-20 12:23:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 12:23:10] Running /usr/bin/apptainer --version
[2025-11-20 12:23:10] apptainer version 1.3.2-1.el7
[2025-11-20 12:23:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 12:23:12] c-205-24.aglt2.org
[2025-11-20 12:23:12] apptainer works
[2025-11-20 12:23:12] Set ATHENA_PROC_NUMBER=12
[2025-11-20 12:23:12] Set ATHENA_CORE_NUMBER=12
[2025-11-20 12:23:12] Starting ATLAS job with PandaID=6893837734
[2025-11-20 12:23:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 19:43:16]  *** The last 200 lines of the pilot log: ***
[2025-11-20 19:43:16] 2025-11-21 00:42:06,942 | INFO     | monitor loop #1972: job 0:6893837734 is in state 'finished'
[2025-11-20 19:43:16] 2025-11-21 00:42:06,942 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 19:43:16] 2025-11-21 00:42:08,242 | INFO     | time since job start (26321s) is within the limit (172800.0s)
[2025-11-20 19:43:16] 2025-11-21 00:42:08,427 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-20 19:43:16] 2025-11-21 00:42:08,431 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1717.9166666666667
[2025-11-20 19:43:16] 2025-11-21 00:42:08,434 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893837734/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 19:43:16] 2025-11-21 00:42:08,435 | INFO     | extracted standard info from prmon json
[2025-11-20 19:43:16] 2025-11-21 00:42:08,435 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 19:43:16] 2025-11-21 00:42:08,435 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 19:43:16] 2025-11-21 00:42:08,443 | INFO     | fitting pss+swap vs Time
[2025-11-20 19:43:16] 2025-11-21 00:42:08,444 | INFO     | sum of square deviations: 24826043707.777237
[2025-11-20 19:43:16] 2025-11-21 00:42:08,448 | INFO     | sum of deviations: 385900156225.4758
[2025-11-20 19:43:16] 2025-11-21 00:42:08,448 | INFO     | mean x: 1763672551.187935
[2025-11-20 19:43:16] 2025-11-21 00:42:08,448 | INFO     | mean y: 3412463.1299303942
[2025-11-20 19:43:16] 2025-11-21 00:42:08,448 | INFO     | intersect: -27411407273.967213
[2025-11-20 19:43:16] 2025-11-21 00:42:08,449 | INFO     | chi2: 6.128244836340341
[2025-11-20 19:43:16] 2025-11-21 00:42:08,449 | INFO     | sum of square deviations: 23972033795.098667
[2025-11-20 19:43:16] 2025-11-21 00:42:08,453 | INFO     | sum of deviations: 537297652886.5634
[2025-11-20 19:43:16] 2025-11-21 00:42:08,453 | INFO     | mean x: 1763672398.690141
[2025-11-20 19:43:16] 2025-11-21 00:42:08,453 | INFO     | mean y: 3439470.1103286385
[2025-11-20 19:43:16] 2025-11-21 00:42:08,453 | INFO     | intersect: -39526666668.43426
[2025-11-20 19:43:16] 2025-11-21 00:42:08,454 | INFO     | chi2: 3.491614349664314
[2025-11-20 19:43:16] 2025-11-21 00:42:08,454 | INFO     | current chi2=3.491614349664314 (change=43.024235439172934 %)
[2025-11-20 19:43:16] 2025-11-21 00:42:08,455 | INFO     | sum of square deviations: 23137838207.415802
[2025-11-20 19:43:16] 2025-11-21 00:42:08,458 | INFO     | sum of deviations: 615622421039.593
[2025-11-20 19:43:16] 2025-11-21 00:42:08,459 | INFO     | mean x: 1763672246.192399
[2025-11-20 19:43:16] 2025-11-21 00:42:08,459 | INFO     | mean y: 3453763.5605700715
[2025-11-20 19:43:16] 2025-11-21 00:42:08,459 | INFO     | intersect: -46922113283.29133
[2025-11-20 19:43:16] 2025-11-21 00:42:08,459 | INFO     | chi2: 2.639603410980596
[2025-11-20 19:43:16] 2025-11-21 00:42:08,459 | INFO     | current chi2=2.639603410980596 (change=24.401633552847297 %)
[2025-11-20 19:43:16] 2025-11-21 00:42:08,460 | INFO     | right removable region: 420
[2025-11-20 19:43:16] 2025-11-21 00:42:08,460 | INFO     | sum of square deviations: 23971984385.098667
[2025-11-20 19:43:16] 2025-11-21 00:42:08,464 | INFO     | sum of deviations: 238496936707.64807
[2025-11-20 19:43:16] 2025-11-21 00:42:08,464 | INFO     | mean x: 1763672703.690141
[2025-11-20 19:43:16] 2025-11-21 00:42:08,464 | INFO     | mean y: 3438712.0352112674
[2025-11-20 19:43:16] 2025-11-21 00:42:08,464 | INFO     | intersect: -17543316301.14026
[2025-11-20 19:43:16] 2025-11-21 00:42:08,465 | INFO     | chi2: 3.6779377467632566
[2025-11-20 19:43:16] 2025-11-21 00:42:08,465 | INFO     | current chi2=3.6779377467632566 (change=39.98383150501467 %)
[2025-11-20 19:43:16] 2025-11-21 00:42:08,465 | INFO     | sum of square deviations: 23137739387.415802
[2025-11-20 19:43:16] 2025-11-21 00:42:08,469 | INFO     | sum of deviations: 205542968855.84818
[2025-11-20 19:43:16] 2025-11-21 00:42:08,469 | INFO     | mean x: 1763672856.192399
[2025-11-20 19:43:16] 2025-11-21 00:42:08,469 | INFO     | mean y: 3444728.9524940616
[2025-11-20 19:43:16] 2025-11-21 00:42:08,469 | INFO     | intersect: -15664056269.41306
[2025-11-20 19:43:16] 2025-11-21 00:42:08,470 | INFO     | chi2: 3.6234822201711623
[2025-11-20 19:43:16] 2025-11-21 00:42:08,470 | INFO     | current chi2=3.6234822201711623 (change=1.4805994647412808 %)
[2025-11-20 19:43:16] 2025-11-21 00:42:08,470 | INFO     | left removable region: 20
[2025-11-20 19:43:16] 2025-11-21 00:42:08,471 | INFO     | sum of square deviations: 19845143057.59743
[2025-11-20 19:43:16] 2025-11-21 00:42:08,474 | INFO     | sum of deviations: 398466222414.19763
[2025-11-20 19:43:16] 2025-11-21 00:42:08,474 | INFO     | mean x: 1763672825.7025
[2025-11-20 19:43:16] 2025-11-21 00:42:08,474 | INFO     | mean y: 3496617.1025
[2025-11-20 19:43:16] 2025-11-21 00:42:08,474 | INFO     | intersect: -35408898566.57472
[2025-11-20 19:43:16] 2025-11-21 00:42:08,475 | INFO     | chi2: 0.06642026365006251
[2025-11-20 19:43:16] 2025-11-21 00:42:08,475 | INFO     | current memory leak: 20.08 B/s (using 400 data points, chi2=0.07)
[2025-11-20 19:43:16] 2025-11-21 00:42:08,475 | INFO     | could have reported an average CPU frequency of 2382 MHz (18 samples)
[2025-11-20 19:43:16] 2025-11-21 00:42:08,476 | INFO     | ..............................
[2025-11-20 19:43:16] 2025-11-21 00:42:08,476 | INFO     | . Timing measurements:
[2025-11-20 19:43:16] 2025-11-21 00:42:08,476 | INFO     | . get job = 0 s
[2025-11-20 19:43:16] 2025-11-21 00:42:08,476 | INFO     | . initial setup = 2 s
[2025-11-20 19:43:16] 2025-11-21 00:42:08,476 | INFO     | . payload setup = 7 s
[2025-11-20 19:43:16] 2025-11-21 00:42:08,476 | INFO     | . stage-in = 0 s
[2025-11-20 19:43:16] 2025-11-21 00:42:08,476 | INFO     | . payload execution = 26282 s
[2025-11-20 19:43:16] 2025-11-21 00:42:08,476 | INFO     | . stage-out = 3 s
[2025-11-20 19:43:16] 2025-11-21 00:42:08,476 | INFO     | . log creation = 0 s
[2025-11-20 19:43:16] 2025-11-21 00:42:08,477 | INFO     | ..............................
[2025-11-20 19:43:16] 2025-11-21 00:42:08,635 | INFO     | 
[2025-11-20 19:43:16] 2025-11-21 00:42:08,636 | INFO     | job summary report
[2025-11-20 19:43:16] 2025-11-21 00:42:08,636 | INFO     | --------------------------------------------------
[2025-11-20 19:43:16] 2025-11-21 00:42:08,636 | INFO     | PanDA job id: 6893837734
[2025-11-20 19:43:16] 2025-11-21 00:42:08,636 | INFO     | task id: 47523449
[2025-11-20 19:43:16] 2025-11-21 00:42:08,636 | INFO     | errors: (none)
[2025-11-20 19:43:16] 2025-11-21 00:42:08,636 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 19:43:16] 2025-11-21 00:42:08,637 | INFO     | pilot state: finished 
[2025-11-20 19:43:16] 2025-11-21 00:42:08,637 | INFO     | transexitcode: 0
[2025-11-20 19:43:16] 2025-11-21 00:42:08,637 | INFO     | exeerrorcode: 0
[2025-11-20 19:43:16] 2025-11-21 00:42:08,637 | INFO     | exeerrordiag: 
[2025-11-20 19:43:16] 2025-11-21 00:42:08,637 | INFO     | exitcode: 0
[2025-11-20 19:43:16] 2025-11-21 00:42:08,637 | INFO     | exitmsg: OK
[2025-11-20 19:43:16] 2025-11-21 00:42:08,638 | INFO     | cpuconsumptiontime: 300137 s
[2025-11-20 19:43:16] 2025-11-21 00:42:08,638 | INFO     | nevents: 1000
[2025-11-20 19:43:16] 2025-11-21 00:42:08,638 | INFO     | neventsw: 0
[2025-11-20 19:43:16] 2025-11-21 00:42:08,638 | INFO     | pid: 21239
[2025-11-20 19:43:16] 2025-11-21 00:42:08,638 | INFO     | pgrp: 21239
[2025-11-20 19:43:16] 2025-11-21 00:42:08,638 | INFO     | corecount: 12
[2025-11-20 19:43:16] 2025-11-21 00:42:08,639 | INFO     | event service: False
[2025-11-20 19:43:16] 2025-11-21 00:42:08,639 | INFO     | sizes: {0: 2298807, 5: 2299069, 11: 2299125, 26293: 2336530, 26297: 2345552, 26299: 2345608, 26305: 2345982}
[2025-11-20 19:43:16] 2025-11-21 00:42:08,639 | INFO     | --------------------------------------------------
[2025-11-20 19:43:16] 2025-11-21 00:42:08,639 | INFO     | 
[2025-11-20 19:43:16] 2025-11-21 00:42:08,639 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-20 19:43:16] 2025-11-21 00:42:08,665 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 19:43:16] 2025-11-21 00:42:08,665 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 19:43:16] 2025-11-21 00:42:08,665 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 19:43:16] 2025-11-21 00:42:08,665 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 19:43:16] 2025-11-21 00:42:08,665 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 19:43:16] 2025-11-21 00:42:08,666 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 19:43:16] 2025-11-21 00:42:08,666 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 19:43:16] 2025-11-21 00:42:08,666 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 19:43:16] 2025-11-21 00:42:08,666 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 19:43:16] 2025-11-21 00:42:08,666 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 19:43:16] 2025-11-21 00:42:08,666 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 19:43:16] 2025-11-21 00:42:08,667 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 19:43:16] 2025-11-21 00:42:08,667 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 19:43:16] 2025-11-21 00:42:08,667 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 19:43:16] 2025-11-21 00:42:08,667 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 19:43:16] 2025-11-21 00:42:08,667 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 19:43:16] 2025-11-21 00:42:08,667 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 19:43:16] 2025-11-21 00:42:08,668 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 19:43:16] 2025-11-21 00:42:08,668 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 19:43:16] 2025-11-21 00:42:08,668 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 19:43:16] 2025-11-21 00:42:08,668 | INFO     | job 6893837734 has completed (purged errors)
[2025-11-20 19:43:16] 2025-11-21 00:42:08,669 | INFO     | overall cleanup function is called
[2025-11-20 19:43:16] 2025-11-21 00:42:09,685 | INFO     | --- collectZombieJob: --- 10, [21239]
[2025-11-20 19:43:16] 2025-11-21 00:42:09,685 | INFO     | zombie collector waiting for pid 21239
[2025-11-20 19:43:16] 2025-11-21 00:42:09,685 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 19:43:16] 2025-11-21 00:42:09,685 | INFO     | collected zombie processes
[2025-11-20 19:43:16] 2025-11-21 00:42:09,685 | INFO     | will attempt to kill all subprocesses of pid=21239
[2025-11-20 19:43:16] 2025-11-21 00:42:09,774 | INFO     | process IDs to be killed: [21239] (in reverse order)
[2025-11-20 19:43:16] 2025-11-21 00:42:09,824 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 19:43:16] 2025-11-21 00:42:09,824 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 19:43:16] 2025-11-21 00:42:09,828 | INFO     | did not find any defunct processes belonging to 21239
[2025-11-20 19:43:16] 2025-11-21 00:42:09,831 | INFO     | did not find any defunct processes belonging to 21239
[2025-11-20 19:43:16] 2025-11-21 00:42:09,832 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 19:43:16] 2025-11-21 00:42:09,833 | INFO     | ready for new job
[2025-11-20 19:43:16] 2025-11-21 00:42:09,833 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 19:43:16] 2025-11-21 00:42:09,835 | INFO     | ***************************************
[2025-11-20 19:43:16] 2025-11-21 00:42:09,835 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 19:43:16] 2025-11-21 00:42:09,835 | INFO     | ***************************************
[2025-11-20 19:43:16] 2025-11-21 00:42:09,835 | INFO     | 
[2025-11-20 19:43:16] 2025-11-21 00:42:09,836 | INFO     | architecture information:
[2025-11-20 19:43:16] 2025-11-21 00:42:09,836 | INFO     | executing command: cat /etc/os-release
[2025-11-20 19:43:16] 2025-11-21 00:42:09,851 | INFO     | cat /etc/os-release:
[2025-11-20 19:43:16] NAME="CentOS Linux"
[2025-11-20 19:43:16] VERSION="7 (Core)"
[2025-11-20 19:43:16] ID="centos"
[2025-11-20 19:43:16] ID_LIKE="rhel fedora"
[2025-11-20 19:43:16] VERSION_ID="7"
[2025-11-20 19:43:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 19:43:16] ANSI_COLOR="0;31"
[2025-11-20 19:43:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 19:43:16] HOME_URL="https://www.centos.org/"
[2025-11-20 19:43:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 19:43:16] 
[2025-11-20 19:43:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 19:43:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 19:43:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 19:43:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 19:43:16] 
[2025-11-20 19:43:16] 2025-11-21 00:42:09,852 | INFO     | ***************************************
[2025-11-20 19:43:16] 2025-11-21 00:42:10,355 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-20 19:43:16] 2025-11-21 00:42:10,372 | INFO     | sufficient remaining disk space (28241297408 B)
[2025-11-20 19:43:16] 2025-11-21 00:42:10,373 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 19:43:16] 2025-11-21 00:42:10,373 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 19:43:16] 2025-11-21 00:42:10,373 | INFO     | update_server=False
[2025-11-20 19:43:16] 2025-11-21 00:42:10,373 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 19:43:16] 2025-11-21 00:42:10,374 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 19:43:16] 2025-11-21 00:42:10,450 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 19:43:16] 2025-11-21 00:42:10,450 | INFO     | aborting loop
[2025-11-20 19:43:16] 2025-11-21 00:42:10,610 | INFO     | all job control threads have been joined
[2025-11-20 19:43:16] 2025-11-21 00:42:11,104 | INFO     | all data control threads have been joined
[2025-11-20 19:43:16] 2025-11-21 00:42:11,324 | INFO     | all payload control threads have been joined
[2025-11-20 19:43:16] 2025-11-21 00:42:11,379 | INFO     | [job] retrieve thread has finished
[2025-11-20 19:43:16] 2025-11-21 00:42:11,379 | INFO     | [job] queue monitor thread has finished
[2025-11-20 19:43:16] 2025-11-21 00:42:11,454 | INFO     | [job] job monitor thread has finished
[2025-11-20 19:43:16] 2025-11-21 00:42:11,583 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 19:43:16] 2025-11-21 00:42:11,616 | INFO     | [job] control thread has finished
[2025-11-20 19:43:16] 2025-11-21 00:42:11,702 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 19:43:16] 2025-11-21 00:42:12,110 | INFO     | [data] control thread has finished
[2025-11-20 19:43:16] 2025-11-21 00:42:12,192 | INFO     | [payload] failed_post thread has finished
[2025-11-20 19:43:16] 2025-11-21 00:42:12,329 | INFO     | [payload] control thread has finished
[2025-11-20 19:43:16] 2025-11-21 00:42:12,344 | INFO     | [payload] validate_post thread has finished
[2025-11-20 19:43:16] 2025-11-21 00:42:12,464 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 19:43:16] 2025-11-21 00:42:12,593 | INFO     | [data] copytool_in thread has finished
[2025-11-20 19:43:16] 2025-11-21 00:42:12,853 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 19:43:16] 2025-11-21 00:42:12,858 | INFO     | [job] validate thread has finished
[2025-11-20 19:43:16] 2025-11-21 00:42:13,524 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 19:43:16] 2025-11-21 00:42:13,588 | INFO     | [data] copytool_out thread has finished
[2025-11-20 19:43:16] 2025-11-21 00:42:17,525 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 19:43:16] 2025-11-21 00:42:20,727 | INFO     | job.realtimelogging is not enabled
[2025-11-20 19:43:16] 2025-11-21 00:42:21,732 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 19:43:16] 2025-11-21 00:42:41,434 | INFO     | PID=14628 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-20 19:43:16] 2025-11-21 00:42:41,435 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 19:43:16] 2025-11-21 00:42:41,435 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 19:43:16] 2025-11-21 00:42:41,435 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 19:43:16] 2025-11-21 00:43:09,859 | INFO     | [monitor] cgroup control has ended
[2025-11-20 19:43:16] 2025-11-21 00:43:10,864 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140428812085056)>', '<ExcThread(monitor, started 140428242315008)>']
[2025-11-20 19:43:16] 2025-11-21 00:43:11,571 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 19:43:16] 2025-11-21 00:43:11,571 | INFO     | [monitor] control thread has ended
[2025-11-20 19:43:16] 2025-11-21 00:43:15,890 | INFO     | all workflow threads have been joined
[2025-11-20 19:43:16] 2025-11-21 00:43:15,890 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 19:43:16] 2025-11-21 00:43:15,890 | INFO     | traces error code: 0
[2025-11-20 19:43:16] 2025-11-21 00:43:15,891 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 19:43:16] 2025-11-21 00:43:15,984 [wrapper] ==== pilot stdout END ====
[2025-11-20 19:43:16] 2025-11-21 00:43:15,988 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 19:43:16] 2025-11-21 00:43:15,992 [wrapper] pilotpid: 14628
[2025-11-20 19:43:16] 2025-11-21 00:43:15,996 [wrapper] Pilot exit status: 0
[2025-11-20 19:43:16] 2025-11-21 00:43:16,010 [wrapper] pandaids: 6893837734
[2025-11-20 19:43:16] 2025-11-21 00:43:16,059 [wrapper] cleanup supervisor_pilot  1310 14629
[2025-11-20 19:43:16] 2025-11-21 00:43:16,063 [wrapper] Test setup, not cleaning
[2025-11-20 19:43:16] 2025-11-21 00:43:16,067 [wrapper] apfmon messages muted
[2025-11-20 19:43:16] 2025-11-21 00:43:16,070 [wrapper] ==== wrapper stdout END ====
[2025-11-20 19:43:16] 2025-11-21 00:43:16,074 [wrapper] ==== wrapper stderr END ====
[2025-11-20 19:43:16]  *** Error codes and diagnostics ***
[2025-11-20 19:43:16]     "exeErrorCode": 0,
[2025-11-20 19:43:16]     "exeErrorDiag": "",
[2025-11-20 19:43:16]     "pilotErrorCode": 0,
[2025-11-20 19:43:16]     "pilotErrorDiag": "",
[2025-11-20 19:43:16]  *** Listing of results directory ***
[2025-11-20 19:43:16] total 1319648
[2025-11-20 19:43:16] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-20 19:43:16] -rwx------ 1 boincer umatlas     36292 Nov 20 05:16 runpilot2-wrapper.sh
[2025-11-20 19:43:16] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 05:17 queuedata.json
[2025-11-20 19:43:16] -rw-r--r-- 1 boincer umatlas       100 Nov 20 12:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 19:43:16] -rwxr-xr-x 1 boincer umatlas      7986 Nov 20 12:23 run_atlas
[2025-11-20 19:43:16] -rw-r--r-- 1 boincer umatlas       105 Nov 20 12:23 job.xml
[2025-11-20 19:43:16] -rw-r--r-- 2 boincer umatlas 408181799 Nov 20 12:23 EVNT.47493127._000118.pool.root.1
[2025-11-20 19:43:16] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 12:23 start_atlas.sh
[2025-11-20 19:43:16] drwxrwx--x 2 boincer umatlas      4096 Nov 20 12:23 shared
[2025-11-20 19:43:16] -rw-r--r-- 2 boincer umatlas    590101 Nov 20 12:23 input.tar.gz
[2025-11-20 19:43:16] -rw-r--r-- 1 boincer umatlas         0 Nov 20 12:23 boinc_lockfile
[2025-11-20 19:43:16] -rw-r--r-- 1 boincer umatlas      2786 Nov 20 12:23 pandaJob.out
[2025-11-20 19:43:16] -rw------- 1 boincer umatlas        57 Nov 20 12:23 setup.sh.local
[2025-11-20 19:43:16] -rw------- 1 boincer umatlas    989472 Nov 20 12:23 agis_schedconf.cvmfs.json
[2025-11-20 19:43:16] drwx------ 5 boincer umatlas      4096 Nov 20 12:23 pilot3
[2025-11-20 19:43:16] -rw-r--r-- 1 boincer umatlas       533 Nov 20 19:30 boinc_task_state.xml
[2025-11-20 19:43:16] -rw-r--r-- 1 boincer umatlas      5954 Nov 20 19:36 init_data.xml
[2025-11-20 19:43:16] -rw------- 1 boincer umatlas 927480061 Nov 20 19:41 HITS.47523449._001180.pool.root.1
[2025-11-20 19:43:16] -rw------- 1 boincer umatlas      1060 Nov 20 19:41 memory_monitor_summary.json
[2025-11-20 19:43:16] -rw------- 1 boincer umatlas   1526164 Nov 20 19:41 agis_ddmendpoints.agis.ALL.json
[2025-11-20 19:43:16] -rw------- 1 boincer umatlas   2180217 Nov 20 19:42 log.47523449._001180.job.log.tgz.1
[2025-11-20 19:43:16] -rw------- 1 boincer umatlas      8677 Nov 20 19:42 heartbeat.json
[2025-11-20 19:43:16] -rw------- 1 boincer umatlas        95 Nov 20 19:42 pilot_heartbeat.json
[2025-11-20 19:43:16] -rw-r--r-- 1 boincer umatlas      8192 Nov 20 19:43 boinc_mmap_file
[2025-11-20 19:43:16] -rw-r--r-- 1 boincer umatlas        29 Nov 20 19:43 wrapper_checkpoint.txt
[2025-11-20 19:43:16] -rw------- 1 boincer umatlas      4818 Nov 20 19:43 pilotlog.txt
[2025-11-20 19:43:16] -rw------- 1 boincer umatlas   3682956 Nov 20 19:43 log.47523449._001180.job.log.1
[2025-11-20 19:43:16] -rw------- 1 boincer umatlas       353 Nov 20 19:43 output.list
[2025-11-20 19:43:16] -rw-r--r-- 1 boincer umatlas       620 Nov 20 19:43 runtime_log
[2025-11-20 19:43:16] -rw------- 1 boincer umatlas   5888000 Nov 20 19:43 result.tar.gz
[2025-11-20 19:43:16] -rw-r--r-- 1 boincer umatlas      9345 Nov 20 19:43 runtime_log.err
[2025-11-20 19:43:16] -rw------- 1 boincer umatlas       670 Nov 20 19:43 a9CODmatGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmAGHKDm91ncwn.diag
[2025-11-20 19:43:16] -rw-r--r-- 1 boincer umatlas     21288 Nov 20 19:43 stderr.txt
[2025-11-20 19:43:16] HITS file was successfully produced:
[2025-11-20 19:43:16] -rw------- 1 boincer umatlas 927480061 Nov 20 19:41 shared/HITS.pool.root.1
[2025-11-20 19:43:16]  *** Contents of shared directory: ***
[2025-11-20 19:43:16] total 1310712
[2025-11-20 19:43:16] -rw-r--r-- 2 boincer umatlas 408181799 Nov 20 12:23 ATLAS.root_0
[2025-11-20 19:43:16] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 12:23 start_atlas.sh
[2025-11-20 19:43:16] -rw-r--r-- 2 boincer umatlas    590101 Nov 20 12:23 input.tar.gz
[2025-11-20 19:43:16] -rw------- 1 boincer umatlas 927480061 Nov 20 19:41 HITS.pool.root.1
[2025-11-20 19:43:16] -rw------- 1 boincer umatlas   5888000 Nov 20 19:43 result.tar.gz
19:43:17 (10260): run_atlas exited; CPU time 293215.315209
19:43:17 (10260): called boinc_finish(0)

</stderr_txt>
]]>

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