Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:46:38 (1684219): wrapper (7.7.26015): starting
17:46:38 (1684219): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 17:46:38] Arguments: --nthreads 8
[2025-11-20 17:46:38] Threads: 8
[2025-11-20 17:46:38] Checking for CVMFS
[2025-11-20 17:46:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 17:46:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 17:46:38] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 17:46:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 17:46:38] 2.13.2.0 6307 24873 235428 153098 3 327 38937240 40960001 12742 16776704 0 31148156 99.727 17594431 35066 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 17:46:38] CVMFS is ok
[2025-11-20 17:46:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 17:46:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 17:46:38] Further information can be found at the LHC@home message board.
[2025-11-20 17:46:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 17:46:38] Checking for apptainer binary...
[2025-11-20 17:46:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 17:46:38] Running /usr/bin/apptainer --version
[2025-11-20 17:46:38] apptainer version 1.4.4-1.el9
[2025-11-20 17:46:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 17:46:38] c-206-39.aglt2.org
[2025-11-20 17:46:38] apptainer works
[2025-11-20 17:46:38] Set ATHENA_PROC_NUMBER=8
[2025-11-20 17:46:38] Set ATHENA_CORE_NUMBER=8
[2025-11-20 17:46:38] Starting ATLAS job with PandaID=6893833030
[2025-11-20 17:46:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 05:17:04]  *** The last 200 lines of the pilot log: ***
[2025-11-21 05:17:04] 2025-11-21 10:16:03,770 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3244.1532499999994
[2025-11-21 05:17:04] 2025-11-21 10:16:03,779 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6893833030/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 05:17:04] 2025-11-21 10:16:03,779 | INFO     | extracted standard info from prmon json
[2025-11-21 05:17:04] 2025-11-21 10:16:03,779 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 05:17:04] 2025-11-21 10:16:03,779 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 05:17:04] 2025-11-21 10:16:03,787 | INFO     | fitting pss+swap vs Time
[2025-11-21 05:17:04] 2025-11-21 10:16:03,787 | INFO     | sum of square deviations: 96639776901.6402
[2025-11-21 05:17:04] 2025-11-21 10:16:03,794 | INFO     | sum of deviations: 1144153881203.2031
[2025-11-21 05:17:04] 2025-11-21 10:16:03,794 | INFO     | mean x: 1763699488.3923304
[2025-11-21 05:17:04] 2025-11-21 10:16:03,794 | INFO     | mean y: 2877096.7699115044
[2025-11-21 05:17:04] 2025-11-21 10:16:03,794 | INFO     | intersect: -20878210169.957203
[2025-11-21 05:17:04] 2025-11-21 10:16:03,795 | INFO     | chi2: 5.675641082584036
[2025-11-21 05:17:04] 2025-11-21 10:16:03,795 | INFO     | sum of square deviations: 94517586745.12941
[2025-11-21 05:17:04] 2025-11-21 10:16:03,802 | INFO     | sum of deviations: 1328036043765.53
[2025-11-21 05:17:04] 2025-11-21 10:16:03,802 | INFO     | mean x: 1763699335.8989599
[2025-11-21 05:17:04] 2025-11-21 10:16:03,802 | INFO     | mean y: 2890287.7578008915
[2025-11-21 05:17:04] 2025-11-21 10:16:03,802 | INFO     | intersect: -24778278689.34631
[2025-11-21 05:17:04] 2025-11-21 10:16:03,802 | INFO     | chi2: 3.230519062630139
[2025-11-21 05:17:04] 2025-11-21 10:16:03,802 | INFO     | current chi2=3.230519062630139 (change=43.08098388139563 %)
[2025-11-21 05:17:04] 2025-11-21 10:16:03,803 | INFO     | sum of square deviations: 92426658692.86813
[2025-11-21 05:17:04] 2025-11-21 10:16:03,809 | INFO     | sum of deviations: 1316488663484.9214
[2025-11-21 05:17:04] 2025-11-21 10:16:03,809 | INFO     | mean x: 1763699183.4041917
[2025-11-21 05:17:04] 2025-11-21 10:16:03,809 | INFO     | mean y: 2889439.6706586825
[2025-11-21 05:17:04] 2025-11-21 10:16:03,809 | INFO     | intersect: -25118542121.16098
[2025-11-21 05:17:04] 2025-11-21 10:16:03,810 | INFO     | chi2: 3.192686636989037
[2025-11-21 05:17:04] 2025-11-21 10:16:03,810 | INFO     | current chi2=3.192686636989037 (change=1.1710943321380798 %)
[2025-11-21 05:17:04] 2025-11-21 10:16:03,810 | INFO     | right removable region: 667
[2025-11-21 05:17:04] 2025-11-21 10:16:03,810 | INFO     | sum of square deviations: 94517217695.12938
[2025-11-21 05:17:04] 2025-11-21 10:16:03,816 | INFO     | sum of deviations: 912758392425.3839
[2025-11-21 05:17:04] 2025-11-21 10:16:03,817 | INFO     | mean x: 1763699640.8989599
[2025-11-21 05:17:04] 2025-11-21 10:16:03,817 | INFO     | mean y: 2893707.9762258544
[2025-11-21 05:17:04] 2025-11-21 10:16:03,817 | INFO     | intersect: -17029258615.220213
[2025-11-21 05:17:04] 2025-11-21 10:16:03,817 | INFO     | chi2: 2.617928796793077
[2025-11-21 05:17:04] 2025-11-21 10:16:03,817 | INFO     | current chi2=2.617928796793077 (change=53.87430673115834 %)
[2025-11-21 05:17:04] 2025-11-21 10:16:03,818 | INFO     | sum of square deviations: 92426043142.67554
[2025-11-21 05:17:04] 2025-11-21 10:16:03,825 | INFO     | sum of deviations: 877992440042.3298
[2025-11-21 05:17:04] 2025-11-21 10:16:03,825 | INFO     | mean x: 1763699793.4026947
[2025-11-21 05:17:04] 2025-11-21 10:16:03,825 | INFO     | mean y: 2896240.9281437127
[2025-11-21 05:17:04] 2025-11-21 10:16:03,825 | INFO     | intersect: -16751202846.938086
[2025-11-21 05:17:04] 2025-11-21 10:16:03,825 | INFO     | chi2: 2.603430982136856
[2025-11-21 05:17:04] 2025-11-21 10:16:03,826 | INFO     | current chi2=2.603430982136856 (change=0.5537894947326409 %)
[2025-11-21 05:17:04] 2025-11-21 10:16:03,826 | INFO     | left removable region: 20
[2025-11-21 05:17:04] 2025-11-21 10:16:03,826 | INFO     | sum of square deviations: 83980478453.49313
[2025-11-21 05:17:04] 2025-11-21 10:16:03,832 | INFO     | sum of deviations: 1014051282319.6816
[2025-11-21 05:17:04] 2025-11-21 10:16:03,832 | INFO     | mean x: 1763699762.9165378
[2025-11-21 05:17:04] 2025-11-21 10:16:03,832 | INFO     | mean y: 2911260.179289026
[2025-11-21 05:17:04] 2025-11-21 10:16:03,832 | INFO     | intersect: -21293490464.929512
[2025-11-21 05:17:04] 2025-11-21 10:16:03,833 | INFO     | chi2: 0.07300387874461398
[2025-11-21 05:17:04] 2025-11-21 10:16:03,833 | INFO     | current memory leak: 12.07 B/s (using 647 data points, chi2=0.07)
[2025-11-21 05:17:04] 2025-11-21 10:16:03,833 | INFO     | could have reported an average CPU frequency of 3222 MHz (26 samples)
[2025-11-21 05:17:04] 2025-11-21 10:16:03,833 | INFO     | ..............................
[2025-11-21 05:17:04] 2025-11-21 10:16:03,834 | INFO     | . Timing measurements:
[2025-11-21 05:17:04] 2025-11-21 10:16:03,834 | INFO     | . get job = 0 s
[2025-11-21 05:17:04] 2025-11-21 10:16:03,834 | INFO     | . initial setup = 2 s
[2025-11-21 05:17:04] 2025-11-21 10:16:03,834 | INFO     | . payload setup = 6 s
[2025-11-21 05:17:04] 2025-11-21 10:16:03,834 | INFO     | . stage-in = 0 s
[2025-11-21 05:17:04] 2025-11-21 10:16:03,834 | INFO     | . payload execution = 41321 s
[2025-11-21 05:17:04] 2025-11-21 10:16:03,834 | INFO     | . stage-out = 2 s
[2025-11-21 05:17:04] 2025-11-21 10:16:03,834 | INFO     | . log creation = 0 s
[2025-11-21 05:17:04] 2025-11-21 10:16:03,834 | INFO     | ..............................
[2025-11-21 05:17:04] 2025-11-21 10:16:03,898 | INFO     | 
[2025-11-21 05:17:04] 2025-11-21 10:16:03,898 | INFO     | job summary report
[2025-11-21 05:17:04] 2025-11-21 10:16:03,898 | INFO     | --------------------------------------------------
[2025-11-21 05:17:04] 2025-11-21 10:16:03,898 | INFO     | PanDA job id: 6893833030
[2025-11-21 05:17:04] 2025-11-21 10:16:03,898 | INFO     | task id: 47523449
[2025-11-21 05:17:04] 2025-11-21 10:16:03,898 | INFO     | errors: (none)
[2025-11-21 05:17:04] 2025-11-21 10:16:03,898 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 05:17:04] 2025-11-21 10:16:03,898 | INFO     | pilot state: finished 
[2025-11-21 05:17:04] 2025-11-21 10:16:03,898 | INFO     | transexitcode: 0
[2025-11-21 05:17:04] 2025-11-21 10:16:03,898 | INFO     | exeerrorcode: 0
[2025-11-21 05:17:04] 2025-11-21 10:16:03,899 | INFO     | exeerrordiag: 
[2025-11-21 05:17:04] 2025-11-21 10:16:03,899 | INFO     | exitcode: 0
[2025-11-21 05:17:04] 2025-11-21 10:16:03,899 | INFO     | exitmsg: OK
[2025-11-21 05:17:04] 2025-11-21 10:16:03,899 | INFO     | cpuconsumptiontime: 205832 s
[2025-11-21 05:17:04] 2025-11-21 10:16:03,899 | INFO     | nevents: 1000
[2025-11-21 05:17:04] 2025-11-21 10:16:03,899 | INFO     | neventsw: 0
[2025-11-21 05:17:04] 2025-11-21 10:16:03,899 | INFO     | pid: 1695465
[2025-11-21 05:17:04] 2025-11-21 10:16:03,899 | INFO     | pgrp: 1695465
[2025-11-21 05:17:04] 2025-11-21 10:16:03,899 | INFO     | corecount: 8
[2025-11-21 05:17:04] 2025-11-21 10:16:03,899 | INFO     | event service: False
[2025-11-21 05:17:04] 2025-11-21 10:16:03,899 | INFO     | sizes: {0: 2298803, 4: 2299065, 11: 2299093, 41331: 2343082, 41334: 2352132, 41337: 2352322}
[2025-11-21 05:17:04] 2025-11-21 10:16:03,899 | INFO     | --------------------------------------------------
[2025-11-21 05:17:04] 2025-11-21 10:16:03,899 | INFO     | 
[2025-11-21 05:17:04] 2025-11-21 10:16:03,900 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-21 05:17:04] 2025-11-21 10:16:03,918 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 05:17:04] 2025-11-21 10:16:03,918 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 05:17:04] 2025-11-21 10:16:03,918 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 05:17:04] 2025-11-21 10:16:03,918 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 05:17:04] 2025-11-21 10:16:03,918 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 05:17:04] 2025-11-21 10:16:03,918 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 05:17:04] 2025-11-21 10:16:03,918 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 05:17:04] 2025-11-21 10:16:03,918 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 05:17:04] 2025-11-21 10:16:03,919 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 05:17:04] 2025-11-21 10:16:03,919 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 05:17:04] 2025-11-21 10:16:03,919 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 05:17:04] 2025-11-21 10:16:03,919 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 05:17:04] 2025-11-21 10:16:03,919 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 05:17:04] 2025-11-21 10:16:03,919 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 05:17:04] 2025-11-21 10:16:03,919 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 05:17:04] 2025-11-21 10:16:03,919 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 05:17:04] 2025-11-21 10:16:03,919 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 05:17:04] 2025-11-21 10:16:03,920 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 05:17:04] 2025-11-21 10:16:03,920 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 05:17:04] 2025-11-21 10:16:03,920 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 05:17:04] 2025-11-21 10:16:03,921 | INFO     | job 6893833030 has completed (purged errors)
[2025-11-21 05:17:04] 2025-11-21 10:16:03,921 | INFO     | overall cleanup function is called
[2025-11-21 05:17:04] 2025-11-21 10:16:04,938 | INFO     | --- collectZombieJob: --- 10, [1695465]
[2025-11-21 05:17:04] 2025-11-21 10:16:04,939 | INFO     | zombie collector waiting for pid 1695465
[2025-11-21 05:17:04] 2025-11-21 10:16:04,939 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 05:17:04] 2025-11-21 10:16:04,939 | INFO     | collected zombie processes
[2025-11-21 05:17:04] 2025-11-21 10:16:04,939 | INFO     | will attempt to kill all subprocesses of pid=1695465
[2025-11-21 05:17:04] 2025-11-21 10:16:05,138 | INFO     | process IDs to be killed: [1695465] (in reverse order)
[2025-11-21 05:17:04] 2025-11-21 10:16:05,234 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 05:17:04] 2025-11-21 10:16:05,234 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 05:17:04] 2025-11-21 10:16:05,242 | INFO     | did not find any defunct processes belonging to 1695465
[2025-11-21 05:17:04] 2025-11-21 10:16:05,249 | INFO     | did not find any defunct processes belonging to 1695465
[2025-11-21 05:17:04] 2025-11-21 10:16:05,250 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 05:17:04] 2025-11-21 10:16:05,250 | INFO     | ready for new job
[2025-11-21 05:17:04] 2025-11-21 10:16:05,250 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 05:17:04] 2025-11-21 10:16:05,253 | INFO     | ***************************************
[2025-11-21 05:17:04] 2025-11-21 10:16:05,253 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 05:17:04] 2025-11-21 10:16:05,253 | INFO     | ***************************************
[2025-11-21 05:17:04] 2025-11-21 10:16:05,253 | INFO     | 
[2025-11-21 05:17:04] 2025-11-21 10:16:05,256 | INFO     | architecture information:
[2025-11-21 05:17:04] 2025-11-21 10:16:05,257 | INFO     | executing command: cat /etc/os-release
[2025-11-21 05:17:04] 2025-11-21 10:16:05,268 | INFO     | cat /etc/os-release:
[2025-11-21 05:17:04] NAME="CentOS Linux"
[2025-11-21 05:17:04] VERSION="7 (Core)"
[2025-11-21 05:17:04] ID="centos"
[2025-11-21 05:17:04] ID_LIKE="rhel fedora"
[2025-11-21 05:17:04] VERSION_ID="7"
[2025-11-21 05:17:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 05:17:04] ANSI_COLOR="0;31"
[2025-11-21 05:17:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 05:17:04] HOME_URL="https://www.centos.org/"
[2025-11-21 05:17:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 05:17:04] 
[2025-11-21 05:17:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 05:17:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 05:17:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 05:17:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 05:17:04] 
[2025-11-21 05:17:04] 2025-11-21 10:16:05,268 | INFO     | ***************************************
[2025-11-21 05:17:04] 2025-11-21 10:16:05,770 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-21 05:17:04] 2025-11-21 10:16:05,783 | INFO     | sufficient remaining disk space (76028051456 B)
[2025-11-21 05:17:04] 2025-11-21 10:16:05,783 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 05:17:04] 2025-11-21 10:16:05,783 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 05:17:04] 2025-11-21 10:16:05,783 | INFO     | update_server=False
[2025-11-21 05:17:04] 2025-11-21 10:16:05,783 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 05:17:04] 2025-11-21 10:16:05,784 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 05:17:04] 2025-11-21 10:16:05,787 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-21 05:17:04] 2025-11-21 10:16:05,787 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-21 05:17:04] 2025-11-21 10:16:05,787 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 05:17:04] 2025-11-21 10:16:05,787 | INFO     | will abort loop
[2025-11-21 05:17:04] 2025-11-21 10:16:05,870 | INFO     | all data control threads have been joined
[2025-11-21 05:17:04] 2025-11-21 10:16:06,227 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 05:17:04] 2025-11-21 10:16:06,786 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 05:17:04] 2025-11-21 10:16:06,788 | INFO     | [job] queue monitor thread has finished
[2025-11-21 05:17:04] 2025-11-21 10:16:06,789 | INFO     | [job] retrieve thread has finished
[2025-11-21 05:17:04] 2025-11-21 10:16:06,790 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 05:17:04] 2025-11-21 10:16:06,792 | INFO     | [job] job monitor thread has finished
[2025-11-21 05:17:04] 2025-11-21 10:16:06,816 | INFO     | all payload control threads have been joined
[2025-11-21 05:17:04] 2025-11-21 10:16:06,875 | INFO     | [data] control thread has finished
[2025-11-21 05:17:04] 2025-11-21 10:16:06,903 | INFO     | [job] validate thread has finished
[2025-11-21 05:17:04] 2025-11-21 10:16:06,925 | INFO     | [payload] validate_post thread has finished
[2025-11-21 05:17:04] 2025-11-21 10:16:07,211 | INFO     | all job control threads have been joined
[2025-11-21 05:17:04] 2025-11-21 10:16:07,380 | INFO     | [data] copytool_in thread has finished
[2025-11-21 05:17:04] 2025-11-21 10:16:07,463 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 05:17:04] 2025-11-21 10:16:07,720 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 05:17:04] 2025-11-21 10:16:07,821 | INFO     | [payload] control thread has finished
[2025-11-21 05:17:04] 2025-11-21 10:16:08,216 | INFO     | [job] control thread has finished
[2025-11-21 05:17:04] 2025-11-21 10:16:08,231 | INFO     | [data] copytool_out thread has finished
[2025-11-21 05:17:04] 2025-11-21 10:16:08,354 | INFO     | [payload] failed_post thread has finished
[2025-11-21 05:17:04] 2025-11-21 10:16:10,791 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 05:17:04] 2025-11-21 10:16:16,836 | INFO     | job.realtimelogging is not enabled
[2025-11-21 05:17:04] 2025-11-21 10:16:17,841 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 05:17:04] 2025-11-21 10:16:35,953 | INFO     | PID=1687888 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 05:17:04] 2025-11-21 10:16:35,953 | INFO     | .. there are 9 such processes running
[2025-11-21 05:17:04] 2025-11-21 10:16:35,955 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 05:17:04] 2025-11-21 10:16:35,955 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 05:17:04] 2025-11-21 10:16:35,955 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 05:17:04] 2025-11-21 10:16:51,341 [wrapper] supervise_pilot (15 min periods counter: 47)
[2025-11-21 05:17:04] 2025-11-21 10:16:59,491 | INFO     | [monitor] cgroup control has ended
[2025-11-21 05:17:04] 2025-11-21 10:16:59,692 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140149988333376)>', '<ExcThread(monitor, started 140149237196544)>']
[2025-11-21 05:17:04] 2025-11-21 10:17:00,067 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 05:17:04] 2025-11-21 10:17:00,067 | INFO     | [monitor] control thread has ended
[2025-11-21 05:17:04] 2025-11-21 10:17:04,717 | INFO     | all workflow threads have been joined
[2025-11-21 05:17:04] 2025-11-21 10:17:04,718 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 05:17:04] 2025-11-21 10:17:04,718 | INFO     | traces error code: 0
[2025-11-21 05:17:04] 2025-11-21 10:17:04,718 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 05:17:04] 2025-11-21 10:17:04,794 [wrapper] ==== pilot stdout END ====
[2025-11-21 05:17:04] 2025-11-21 10:17:04,797 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 05:17:04] 2025-11-21 10:17:04,799 [wrapper] pilotpid: 1687888
[2025-11-21 05:17:04] 2025-11-21 10:17:04,802 [wrapper] Pilot exit status: 0
[2025-11-21 05:17:04] 2025-11-21 10:17:04,810 [wrapper] pandaids: 6893833030
[2025-11-21 05:17:04] 2025-11-21 10:17:04,861 [wrapper] cleanup supervisor_pilot 2887511 1687889
[2025-11-21 05:17:04] 2025-11-21 10:17:04,864 [wrapper] Test setup, not cleaning
[2025-11-21 05:17:04] 2025-11-21 10:17:04,866 [wrapper] apfmon messages muted
[2025-11-21 05:17:04] 2025-11-21 10:17:04,869 [wrapper] ==== wrapper stdout END ====
[2025-11-21 05:17:04] 2025-11-21 10:17:04,871 [wrapper] ==== wrapper stderr END ====
[2025-11-21 05:17:04]  *** Error codes and diagnostics ***
[2025-11-21 05:17:04]     "exeErrorCode": 0,
[2025-11-21 05:17:04]     "exeErrorDiag": "",
[2025-11-21 05:17:04]     "pilotErrorCode": 0,
[2025-11-21 05:17:04]     "pilotErrorDiag": "",
[2025-11-21 05:17:04]  *** Listing of results directory ***
[2025-11-21 05:17:04] total 1321024
[2025-11-21 05:17:04] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-21 05:17:04] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 05:11 queuedata.json
[2025-11-21 05:17:04] -rwx------. 1 boincer umatlas     36292 Nov 20 05:11 runpilot2-wrapper.sh
[2025-11-21 05:17:04] -rw-r--r--. 1 boincer umatlas       100 Nov 20 17:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 05:17:04] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 20 17:46 run_atlas
[2025-11-21 05:17:04] -rw-r--r--. 1 boincer umatlas       105 Nov 20 17:46 job.xml
[2025-11-21 05:17:04] -rw-r--r--. 2 boincer umatlas 409584985 Nov 20 17:46 EVNT.47493127._000028.pool.root.1
[2025-11-21 05:17:04] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 17:46 start_atlas.sh
[2025-11-21 05:17:04] drwxrwx--x. 2 boincer umatlas      4096 Nov 20 17:46 shared
[2025-11-21 05:17:04] -rw-r--r--. 2 boincer umatlas    590104 Nov 20 17:46 input.tar.gz
[2025-11-21 05:17:04] -rw-r--r--. 1 boincer umatlas         0 Nov 20 17:46 boinc_lockfile
[2025-11-21 05:17:04] -rw-r--r--. 1 boincer umatlas      2784 Nov 20 17:46 pandaJob.out
[2025-11-21 05:17:04] -rw-------. 1 boincer umatlas        57 Nov 20 17:46 setup.sh.local
[2025-11-21 05:17:04] -rw-------. 1 boincer umatlas    989825 Nov 20 17:46 agis_schedconf.cvmfs.json
[2025-11-21 05:17:04] drwx------. 5 boincer umatlas      4096 Nov 20 17:46 pilot3
[2025-11-21 05:17:04] -rw-r--r--. 1 boincer umatlas       533 Nov 21 05:08 boinc_task_state.xml
[2025-11-21 05:17:04] -rw-r--r--. 1 boincer umatlas      6905 Nov 21 05:12 init_data.xml
[2025-11-21 05:17:04] -rw-------. 1 boincer umatlas 923910476 Nov 21 05:15 HITS.47523449._000279.pool.root.1
[2025-11-21 05:17:04] -rw-------. 1 boincer umatlas      1043 Nov 21 05:15 memory_monitor_summary.json
[2025-11-21 05:17:04] -rw-------. 1 boincer umatlas   1526164 Nov 21 05:15 agis_ddmendpoints.agis.ALL.json
[2025-11-21 05:17:04] -rw-------. 1 boincer umatlas   1937257 Nov 21 05:16 log.47523449._000279.job.log.tgz.1
[2025-11-21 05:17:04] -rw-------. 1 boincer umatlas      8578 Nov 21 05:16 heartbeat.json
[2025-11-21 05:17:04] -rw-------. 1 boincer umatlas        95 Nov 21 05:16 pilot_heartbeat.json
[2025-11-21 05:17:04] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 05:17 boinc_mmap_file
[2025-11-21 05:17:04] -rw-r--r--. 1 boincer umatlas        29 Nov 21 05:17 wrapper_checkpoint.txt
[2025-11-21 05:17:04] -rw-------. 1 boincer umatlas      5081 Nov 21 05:17 pilotlog.txt
[2025-11-21 05:17:04] -rw-------. 1 boincer umatlas   5717428 Nov 21 05:17 log.47523449._000279.job.log.1
[2025-11-21 05:17:04] -rw-------. 1 boincer umatlas       353 Nov 21 05:17 output.list
[2025-11-21 05:17:04] -rw-r--r--. 1 boincer umatlas       620 Nov 21 05:17 runtime_log
[2025-11-21 05:17:04] -rw-------. 1 boincer umatlas   7669760 Nov 21 05:17 result.tar.gz
[2025-11-21 05:17:04] -rw-r--r--. 1 boincer umatlas      9343 Nov 21 05:17 runtime_log.err
[2025-11-21 05:17:04] -rw-------. 1 boincer umatlas       660 Nov 21 05:17 I6ZMDmeoGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmg9GKDmk7XzCo.diag
[2025-11-21 05:17:04] -rw-r--r--. 1 boincer umatlas     21261 Nov 21 05:17 stderr.txt
[2025-11-21 05:17:04] HITS file was successfully produced:
[2025-11-21 05:17:04] -rw-------. 1 boincer umatlas 923910476 Nov 21 05:15 shared/HITS.pool.root.1
[2025-11-21 05:17:04]  *** Contents of shared directory: ***
[2025-11-21 05:17:04] total 1310344
[2025-11-21 05:17:04] -rw-r--r--. 2 boincer umatlas 409584985 Nov 20 17:46 ATLAS.root_0
[2025-11-21 05:17:04] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 17:46 start_atlas.sh
[2025-11-21 05:17:04] -rw-r--r--. 2 boincer umatlas    590104 Nov 20 17:46 input.tar.gz
[2025-11-21 05:17:04] -rw-------. 1 boincer umatlas 923910476 Nov 21 05:15 HITS.pool.root.1
[2025-11-21 05:17:04] -rw-------. 1 boincer umatlas   7669760 Nov 21 05:17 result.tar.gz
05:17:06 (1684219): run_atlas exited; CPU time 205541.738427
05:17:06 (1684219): called boinc_finish(0)

</stderr_txt>
]]>

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