Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:22:36 (1872071): wrapper (7.7.26015): starting
13:22:36 (1872071): wrapper: running run_atlas (--nthreads 9)
[2025-11-20 13:22:36] Arguments: --nthreads 9
[2025-11-20 13:22:36] Threads: 9
[2025-11-20 13:22:36] Checking for CVMFS
[2025-11-20 13:22:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 13:22:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 13:22:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 13:22:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 13:22:38] 2.13.2.0 5239 25452 164544 153092 3 311 38600062 39288832 7709 16776704 0 13435595 99.639 12099371 36229 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 13:22:38] CVMFS is ok
[2025-11-20 13:22:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 13:22:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 13:22:38] Further information can be found at the LHC@home message board.
[2025-11-20 13:22:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 13:22:38] Checking for apptainer binary...
[2025-11-20 13:22:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 13:22:38] Running /usr/bin/apptainer --version
[2025-11-20 13:22:38] apptainer version 1.4.4-1.el9
[2025-11-20 13:22:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 13:22:39] c-210-6.aglt2.org
[2025-11-20 13:22:39] apptainer works
[2025-11-20 13:22:39] Set ATHENA_PROC_NUMBER=9
[2025-11-20 13:22:39] Set ATHENA_CORE_NUMBER=9
[2025-11-20 13:22:39] Starting ATLAS job with PandaID=6893834923
[2025-11-20 13:22:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 09:08:48]  *** The last 200 lines of the pilot log: ***
[2025-11-21 09:08:48] 2025-11-21 14:08:02,343 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 09:08:48] 2025-11-21 14:08:02,364 | INFO     | fitting pss+swap vs Time
[2025-11-21 09:08:48] 2025-11-21 14:08:02,366 | INFO     | sum of square deviations: 487735908562.79565
[2025-11-21 09:08:48] 2025-11-21 14:08:02,401 | INFO     | sum of deviations: 4162778685835.441
[2025-11-21 09:08:48] 2025-11-21 14:08:02,401 | INFO     | mean x: 1763698598.7153912
[2025-11-21 09:08:48] 2025-11-21 14:08:02,401 | INFO     | mean y: 3057351.8744625966
[2025-11-21 09:08:48] 2025-11-21 14:08:02,402 | INFO     | intersect: -15049939169.55144
[2025-11-21 09:08:48] 2025-11-21 14:08:02,403 | INFO     | chi2: 8.920361684193733
[2025-11-21 09:08:48] 2025-11-21 14:08:02,405 | INFO     | sum of square deviations: 481472390270.5186
[2025-11-21 09:08:48] 2025-11-21 14:08:02,439 | INFO     | sum of deviations: 4558815693070.981
[2025-11-21 09:08:48] 2025-11-21 14:08:02,439 | INFO     | mean x: 1763698446.2227979
[2025-11-21 09:08:48] 2025-11-21 14:08:02,439 | INFO     | mean y: 3066990.189982729
[2025-11-21 09:08:48] 2025-11-21 14:08:02,440 | INFO     | intersect: -16696491109.014532
[2025-11-21 09:08:48] 2025-11-21 14:08:02,441 | INFO     | chi2: 5.921618102687608
[2025-11-21 09:08:48] 2025-11-21 14:08:02,441 | INFO     | current chi2=5.921618102687608 (change=33.61683850577148 %)
[2025-11-21 09:08:48] 2025-11-21 14:08:02,443 | INFO     | sum of square deviations: 475262733453.11304
[2025-11-21 09:08:48] 2025-11-21 14:08:02,477 | INFO     | sum of deviations: 4643987114519.585
[2025-11-21 09:08:48] 2025-11-21 14:08:02,477 | INFO     | mean x: 1763698293.730269
[2025-11-21 09:08:48] 2025-11-21 14:08:02,477 | INFO     | mean y: 3069077.410234172
[2025-11-21 09:08:48] 2025-11-21 14:08:02,478 | INFO     | intersect: -17230750394.344307
[2025-11-21 09:08:48] 2025-11-21 14:08:02,479 | INFO     | chi2: 5.567688382073848
[2025-11-21 09:08:48] 2025-11-21 14:08:02,479 | INFO     | current chi2=5.567688382073848 (change=5.976908920437215 %)
[2025-11-21 09:08:48] 2025-11-21 14:08:02,479 | INFO     | right removable region: 1152
[2025-11-21 09:08:48] 2025-11-21 14:08:02,481 | INFO     | sum of square deviations: 481471173320.51874
[2025-11-21 09:08:48] 2025-11-21 14:08:02,516 | INFO     | sum of deviations: 3705099168595.0654
[2025-11-21 09:08:48] 2025-11-21 14:08:02,516 | INFO     | mean x: 1763698751.2227979
[2025-11-21 09:08:48] 2025-11-21 14:08:02,516 | INFO     | mean y: 3068490.232297064
[2025-11-21 09:08:48] 2025-11-21 14:08:02,516 | INFO     | intersect: -13569247234.799826
[2025-11-21 09:08:48] 2025-11-21 14:08:02,518 | INFO     | chi2: 5.402608650760708
[2025-11-21 09:08:48] 2025-11-21 14:08:02,518 | INFO     | current chi2=5.402608650760708 (change=39.43509420325681 %)
[2025-11-21 09:08:48] 2025-11-21 14:08:02,520 | INFO     | sum of square deviations: 475260370437.57434
[2025-11-21 09:08:48] 2025-11-21 14:08:02,554 | INFO     | sum of deviations: 3368727199364.8687
[2025-11-21 09:08:48] 2025-11-21 14:08:02,555 | INFO     | mean x: 1763698903.7294016
[2025-11-21 09:08:48] 2025-11-21 14:08:02,555 | INFO     | mean y: 3076746.94189072
[2025-11-21 09:08:48] 2025-11-21 14:08:02,555 | INFO     | intersect: -12498324249.34346
[2025-11-21 09:08:48] 2025-11-21 14:08:02,557 | INFO     | chi2: 3.657920241730795
[2025-11-21 09:08:48] 2025-11-21 14:08:02,557 | INFO     | current chi2=3.657920241730795 (change=32.293444182455346 %)
[2025-11-21 09:08:48] 2025-11-21 14:08:02,558 | INFO     | sum of square deviations: 469103618109.8285
[2025-11-21 09:08:48] 2025-11-21 14:08:02,594 | INFO     | sum of deviations: 3272960266755.88
[2025-11-21 09:08:48] 2025-11-21 14:08:02,594 | INFO     | mean x: 1763699056.2308362
[2025-11-21 09:08:48] 2025-11-21 14:08:02,594 | INFO     | mean y: 3079118.6646341463
[2025-11-21 09:08:48] 2025-11-21 14:08:02,595 | INFO     | intersect: -12302340645.134512
[2025-11-21 09:08:48] 2025-11-21 14:08:02,596 | INFO     | chi2: 3.608714499123987
[2025-11-21 09:08:48] 2025-11-21 14:08:02,596 | INFO     | current chi2=3.608714499123987 (change=1.3451835839790163 %)
[2025-11-21 09:08:48] 2025-11-21 14:08:02,596 | INFO     | left removable region: 30
[2025-11-21 09:08:48] 2025-11-21 14:08:02,598 | INFO     | sum of square deviations: 437946199659.087
[2025-11-21 09:08:48] 2025-11-21 14:08:02,631 | INFO     | sum of deviations: 3555056704239.8086
[2025-11-21 09:08:48] 2025-11-21 14:08:02,631 | INFO     | mean x: 1763699178.2442067
[2025-11-21 09:08:48] 2025-11-21 14:08:02,631 | INFO     | mean y: 3096275.278074866
[2025-11-21 09:08:48] 2025-11-21 14:08:02,631 | INFO     | intersect: -14313846291.548948
[2025-11-21 09:08:48] 2025-11-21 14:08:02,633 | INFO     | chi2: 0.18396961254580324
[2025-11-21 09:08:48] 2025-11-21 14:08:02,633 | INFO     | current memory leak: 8.12 B/s (using 1122 data points, chi2=0.18)
[2025-11-21 09:08:48] 2025-11-21 14:08:02,634 | INFO     | could have reported an average CPU frequency of 2600 MHz (42 samples)
[2025-11-21 09:08:48] 2025-11-21 14:08:02,635 | INFO     | ..............................
[2025-11-21 09:08:48] 2025-11-21 14:08:02,635 | INFO     | . Timing measurements:
[2025-11-21 09:08:48] 2025-11-21 14:08:02,635 | INFO     | . get job = 0 s
[2025-11-21 09:08:48] 2025-11-21 14:08:02,635 | INFO     | . initial setup = 3 s
[2025-11-21 09:08:48] 2025-11-21 14:08:02,635 | INFO     | . payload setup = 46 s
[2025-11-21 09:08:48] 2025-11-21 14:08:02,635 | INFO     | . stage-in = 0 s
[2025-11-21 09:08:48] 2025-11-21 14:08:02,635 | INFO     | . payload execution = 70938 s
[2025-11-21 09:08:48] 2025-11-21 14:08:02,635 | INFO     | . stage-out = 3 s
[2025-11-21 09:08:48] 2025-11-21 14:08:02,635 | INFO     | . log creation = 0 s
[2025-11-21 09:08:48] 2025-11-21 14:08:02,636 | INFO     | ..............................
[2025-11-21 09:08:48] 2025-11-21 14:08:02,744 | INFO     | 
[2025-11-21 09:08:48] 2025-11-21 14:08:02,744 | INFO     | job summary report
[2025-11-21 09:08:48] 2025-11-21 14:08:02,744 | INFO     | --------------------------------------------------
[2025-11-21 09:08:48] 2025-11-21 14:08:02,744 | INFO     | PanDA job id: 6893834923
[2025-11-21 09:08:48] 2025-11-21 14:08:02,744 | INFO     | task id: 47523449
[2025-11-21 09:08:48] 2025-11-21 14:08:02,744 | INFO     | errors: (none)
[2025-11-21 09:08:48] 2025-11-21 14:08:02,745 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 09:08:48] 2025-11-21 14:08:02,745 | INFO     | pilot state: finished 
[2025-11-21 09:08:48] 2025-11-21 14:08:02,745 | INFO     | transexitcode: 0
[2025-11-21 09:08:48] 2025-11-21 14:08:02,745 | INFO     | exeerrorcode: 0
[2025-11-21 09:08:48] 2025-11-21 14:08:02,745 | INFO     | exeerrordiag: 
[2025-11-21 09:08:48] 2025-11-21 14:08:02,745 | INFO     | exitcode: 0
[2025-11-21 09:08:48] 2025-11-21 14:08:02,745 | INFO     | exitmsg: OK
[2025-11-21 09:08:48] 2025-11-21 14:08:02,745 | INFO     | cpuconsumptiontime: 300240 s
[2025-11-21 09:08:48] 2025-11-21 14:08:02,745 | INFO     | nevents: 1000
[2025-11-21 09:08:48] 2025-11-21 14:08:02,746 | INFO     | neventsw: 0
[2025-11-21 09:08:48] 2025-11-21 14:08:02,746 | INFO     | pid: 1886677
[2025-11-21 09:08:48] 2025-11-21 14:08:02,746 | INFO     | pgrp: 1886677
[2025-11-21 09:08:48] 2025-11-21 14:08:02,746 | INFO     | corecount: 9
[2025-11-21 09:08:48] 2025-11-21 14:08:02,746 | INFO     | event service: False
[2025-11-21 09:08:48] 2025-11-21 14:08:02,746 | INFO     | sizes: {0: 2297975, 1: 2298660, 2: 2298859, 13: 2298859, 24: 2298915, 31: 2299205, 35: 2299361, 70984: 2358081, 70985: 2358080, 70989: 2367130, 70990: 2367186, 709
[2025-11-21 09:08:48] 2025-11-21 14:08:02,746 | INFO     | --------------------------------------------------
[2025-11-21 09:08:48] 2025-11-21 14:08:02,746 | INFO     | 
[2025-11-21 09:08:48] 2025-11-21 14:08:02,746 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-21 09:08:48] 2025-11-21 14:08:02,765 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 09:08:48] 2025-11-21 14:08:02,765 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 09:08:48] 2025-11-21 14:08:02,765 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 09:08:48] 2025-11-21 14:08:02,765 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 09:08:48] 2025-11-21 14:08:02,765 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 09:08:48] 2025-11-21 14:08:02,766 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 09:08:48] 2025-11-21 14:08:02,766 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 09:08:48] 2025-11-21 14:08:02,766 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 09:08:48] 2025-11-21 14:08:02,766 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 09:08:48] 2025-11-21 14:08:02,766 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 09:08:48] 2025-11-21 14:08:02,766 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 09:08:48] 2025-11-21 14:08:02,766 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 09:08:48] 2025-11-21 14:08:02,766 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 09:08:48] 2025-11-21 14:08:02,766 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 09:08:48] 2025-11-21 14:08:02,767 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 09:08:48] 2025-11-21 14:08:02,767 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 09:08:48] 2025-11-21 14:08:02,767 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 09:08:48] 2025-11-21 14:08:02,767 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 09:08:48] 2025-11-21 14:08:02,767 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 09:08:48] 2025-11-21 14:08:02,767 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 09:08:48] 2025-11-21 14:08:02,767 | INFO     | job 6893834923 has completed (purged errors)
[2025-11-21 09:08:48] 2025-11-21 14:08:02,768 | INFO     | overall cleanup function is called
[2025-11-21 09:08:48] 2025-11-21 14:08:03,784 | INFO     | --- collectZombieJob: --- 10, [1886677]
[2025-11-21 09:08:48] 2025-11-21 14:08:03,784 | INFO     | zombie collector waiting for pid 1886677
[2025-11-21 09:08:48] 2025-11-21 14:08:03,784 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 09:08:48] 2025-11-21 14:08:03,784 | INFO     | collected zombie processes
[2025-11-21 09:08:48] 2025-11-21 14:08:03,785 | INFO     | will attempt to kill all subprocesses of pid=1886677
[2025-11-21 09:08:48] 2025-11-21 14:08:04,045 | INFO     | process IDs to be killed: [1886677] (in reverse order)
[2025-11-21 09:08:48] 2025-11-21 14:08:04,109 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 09:08:48] 2025-11-21 14:08:04,109 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 09:08:48] 2025-11-21 14:08:04,116 | INFO     | did not find any defunct processes belonging to 1886677
[2025-11-21 09:08:48] 2025-11-21 14:08:04,121 | INFO     | did not find any defunct processes belonging to 1886677
[2025-11-21 09:08:48] 2025-11-21 14:08:04,123 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 09:08:48] 2025-11-21 14:08:04,123 | INFO     | ready for new job
[2025-11-21 09:08:48] 2025-11-21 14:08:04,123 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 09:08:48] 2025-11-21 14:08:04,128 | INFO     | ***************************************
[2025-11-21 09:08:48] 2025-11-21 14:08:04,129 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 09:08:48] 2025-11-21 14:08:04,129 | INFO     | ***************************************
[2025-11-21 09:08:48] 2025-11-21 14:08:04,129 | INFO     | 
[2025-11-21 09:08:48] 2025-11-21 14:08:04,131 | INFO     | architecture information:
[2025-11-21 09:08:48] 2025-11-21 14:08:04,132 | INFO     | executing command: cat /etc/os-release
[2025-11-21 09:08:48] 2025-11-21 14:08:04,148 | INFO     | cat /etc/os-release:
[2025-11-21 09:08:48] NAME="CentOS Linux"
[2025-11-21 09:08:48] VERSION="7 (Core)"
[2025-11-21 09:08:48] ID="centos"
[2025-11-21 09:08:48] ID_LIKE="rhel fedora"
[2025-11-21 09:08:48] VERSION_ID="7"
[2025-11-21 09:08:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 09:08:48] ANSI_COLOR="0;31"
[2025-11-21 09:08:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 09:08:48] HOME_URL="https://www.centos.org/"
[2025-11-21 09:08:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 09:08:48] 
[2025-11-21 09:08:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 09:08:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 09:08:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 09:08:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 09:08:48] 
[2025-11-21 09:08:48] 2025-11-21 14:08:04,148 | INFO     | ***************************************
[2025-11-21 09:08:48] 2025-11-21 14:08:04,652 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-21 09:08:48] 2025-11-21 14:08:04,671 | INFO     | sufficient remaining disk space (46696235008 B)
[2025-11-21 09:08:48] 2025-11-21 14:08:04,673 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 09:08:48] 2025-11-21 14:08:04,674 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 09:08:48] 2025-11-21 14:08:04,674 | INFO     | update_server=False
[2025-11-21 09:08:48] 2025-11-21 14:08:04,674 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 09:08:48] 2025-11-21 14:08:04,674 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 09:08:48] 2025-11-21 14:08:04,675 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 09:08:48] 2025-11-21 14:08:04,676 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 09:08:48] 2025-11-21 14:08:04,676 | INFO     | aborting loop
[2025-11-21 09:08:48] 2025-11-21 14:08:04,676 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 09:08:48] 2025-11-21 14:08:04,847 | INFO     | all job control threads have been joined
[2025-11-21 09:08:48] 2025-11-21 14:08:05,644 | INFO     | all data control threads have been joined
[2025-11-21 09:08:48] 2025-11-21 14:08:05,680 | INFO     | [job] retrieve thread has finished
[2025-11-21 09:08:48] 2025-11-21 14:08:05,680 | INFO     | [job] queue monitor thread has finished
[2025-11-21 09:08:48] 2025-11-21 14:08:05,682 | INFO     | [job] job monitor thread has finished
[2025-11-21 09:08:48] 2025-11-21 14:08:05,724 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 09:08:48] 2025-11-21 14:08:05,840 | INFO     | [payload] validate_post thread has finished
[2025-11-21 09:08:48] 2025-11-21 14:08:05,852 | INFO     | [job] control thread has finished
[2025-11-21 09:08:48] 2025-11-21 14:08:05,931 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 09:08:48] 2025-11-21 14:08:05,960 | INFO     | [job] validate thread has finished
[2025-11-21 09:08:48] 2025-11-21 14:08:05,999 | INFO     | [payload] failed_post thread has finished
[2025-11-21 09:08:48] 2025-11-21 14:08:05,999 | INFO     | all payload control threads have been joined
[2025-11-21 09:08:48] 2025-11-21 14:08:06,033 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 09:08:48] 2025-11-21 14:08:06,044 | INFO     | [data] copytool_in thread has finished
[2025-11-21 09:08:48] 2025-11-21 14:08:06,536 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 09:08:48] 2025-11-21 14:08:06,649 | INFO     | [data] control thread has finished
[2025-11-21 09:08:48] 2025-11-21 14:08:06,683 | INFO     | [data] copytool_out thread has finished
[2025-11-21 09:08:48] 2025-11-21 14:08:07,004 | INFO     | [payload] control thread has finished
[2025-11-21 09:08:48] 2025-11-21 14:08:08,680 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 09:08:48] 2025-11-21 14:08:34,665 | INFO     | PID=1877179 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 09:08:48] 2025-11-21 14:08:34,665 | INFO     | .. there are 6 such processes running
[2025-11-21 09:08:48] 2025-11-21 14:08:34,665 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 09:08:48] 2025-11-21 14:08:34,666 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 09:08:48] 2025-11-21 14:08:34,666 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 09:08:48] 2025-11-21 14:08:35,862 [wrapper] supervise_pilot (15 min periods counter: 80)
[2025-11-21 09:08:48] 2025-11-21 14:08:42,425 | INFO     | [monitor] cgroup control has ended
[2025-11-21 09:08:48] 2025-11-21 14:08:42,907 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140143792600896)>', '<ExcThread(monitor, started 140143520356096)>']
[2025-11-21 09:08:48] 2025-11-21 14:08:43,712 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 09:08:48] 2025-11-21 14:08:43,712 | INFO     | [monitor] control thread has ended
[2025-11-21 09:08:48] 2025-11-21 14:08:47,933 | INFO     | all workflow threads have been joined
[2025-11-21 09:08:48] 2025-11-21 14:08:47,933 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 09:08:48] 2025-11-21 14:08:47,933 | INFO     | traces error code: 0
[2025-11-21 09:08:48] 2025-11-21 14:08:47,934 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 09:08:48] 2025-11-21 14:08:48,061 [wrapper] ==== pilot stdout END ====
[2025-11-21 09:08:48] 2025-11-21 14:08:48,064 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 09:08:48] 2025-11-21 14:08:48,069 [wrapper] pilotpid: 1877179
[2025-11-21 09:08:48] 2025-11-21 14:08:48,072 [wrapper] Pilot exit status: 0
[2025-11-21 09:08:48] 2025-11-21 14:08:48,087 [wrapper] pandaids: 6893834923
[2025-11-21 09:08:48] 2025-11-21 14:08:48,141 [wrapper] cleanup supervisor_pilot 3510155 1877180
[2025-11-21 09:08:48] 2025-11-21 14:08:48,145 [wrapper] Test setup, not cleaning
[2025-11-21 09:08:48] 2025-11-21 14:08:48,149 [wrapper] apfmon messages muted
[2025-11-21 09:08:48] 2025-11-21 14:08:48,153 [wrapper] ==== wrapper stdout END ====
[2025-11-21 09:08:48] 2025-11-21 14:08:48,157 [wrapper] ==== wrapper stderr END ====
[2025-11-21 09:08:48]  *** Error codes and diagnostics ***
[2025-11-21 09:08:48]     "exeErrorCode": 0,
[2025-11-21 09:08:48]     "exeErrorDiag": "",
[2025-11-21 09:08:48]     "pilotErrorCode": 0,
[2025-11-21 09:08:48]     "pilotErrorDiag": "",
[2025-11-21 09:08:48]  *** Listing of results directory ***
[2025-11-21 09:08:48] total 1326304
[2025-11-21 09:08:48] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-21 09:08:48] -rwx------. 1 boincer umatlas     36292 Nov 20 05:14 runpilot2-wrapper.sh
[2025-11-21 09:08:48] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 05:15 queuedata.json
[2025-11-21 09:08:48] -rw-r--r--. 1 boincer umatlas       100 Nov 20 13:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 09:08:48] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 20 13:22 run_atlas
[2025-11-21 09:08:48] -rw-r--r--. 1 boincer umatlas       105 Nov 20 13:22 job.xml
[2025-11-21 09:08:48] -rw-r--r--. 2 boincer umatlas 407386603 Nov 20 13:22 EVNT.47493127._000077.pool.root.1
[2025-11-21 09:08:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 13:22 start_atlas.sh
[2025-11-21 09:08:48] drwxrwx--x. 2 boincer umatlas      4096 Nov 20 13:22 shared
[2025-11-21 09:08:48] -rw-r--r--. 2 boincer umatlas    590100 Nov 20 13:22 input.tar.gz
[2025-11-21 09:08:48] -rw-r--r--. 1 boincer umatlas         0 Nov 20 13:22 boinc_lockfile
[2025-11-21 09:08:48] -rw-r--r--. 1 boincer umatlas      2784 Nov 20 13:22 pandaJob.out
[2025-11-21 09:08:48] -rw-------. 1 boincer umatlas        57 Nov 20 13:22 setup.sh.local
[2025-11-21 09:08:48] -rw-------. 1 boincer umatlas    989472 Nov 20 13:23 agis_schedconf.cvmfs.json
[2025-11-21 09:08:48] drwx------. 5 boincer umatlas      4096 Nov 20 13:23 pilot3
[2025-11-21 09:08:48] -rw-r--r--. 1 boincer umatlas       533 Nov 21 08:56 boinc_task_state.xml
[2025-11-21 09:08:48] -rw-r--r--. 1 boincer umatlas      6662 Nov 21 09:03 init_data.xml
[2025-11-21 09:08:48] -rw-------. 1 boincer umatlas 922635326 Nov 21 09:07 HITS.47523449._000765.pool.root.1
[2025-11-21 09:08:48] -rw-------. 1 boincer umatlas        95 Nov 21 09:07 pilot_heartbeat.json
[2025-11-21 09:08:48] -rw-------. 1 boincer umatlas      1053 Nov 21 09:07 memory_monitor_summary.json
[2025-11-21 09:08:48] -rw-------. 1 boincer umatlas   1526164 Nov 21 09:07 agis_ddmendpoints.agis.ALL.json
[2025-11-21 09:08:48] -rw-------. 1 boincer umatlas   2413907 Nov 21 09:07 log.47523449._000765.job.log.tgz.1
[2025-11-21 09:08:48] -rw-------. 1 boincer umatlas      8631 Nov 21 09:08 heartbeat.json
[2025-11-21 09:08:48] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 09:08 boinc_mmap_file
[2025-11-21 09:08:48] -rw-r--r--. 1 boincer umatlas        29 Nov 21 09:08 wrapper_checkpoint.txt
[2025-11-21 09:08:48] -rw-------. 1 boincer umatlas      4823 Nov 21 09:08 pilotlog.txt
[2025-11-21 09:08:48] -rw-------. 1 boincer umatlas   9677493 Nov 21 09:08 log.47523449._000765.job.log.1
[2025-11-21 09:08:48] -rw-------. 1 boincer umatlas       353 Nov 21 09:08 output.list
[2025-11-21 09:08:48] -rw-r--r--. 1 boincer umatlas       620 Nov 21 09:08 runtime_log
[2025-11-21 09:08:48] -rw-------. 1 boincer umatlas  12113920 Nov 21 09:08 result.tar.gz
[2025-11-21 09:08:48] -rw-------. 1 boincer umatlas       659 Nov 21 09:08 U7PMDmcrGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpEHKDmG3ovhm.diag
[2025-11-21 09:08:48] -rw-r--r--. 1 boincer umatlas      9338 Nov 21 09:08 runtime_log.err
[2025-11-21 09:08:48] -rw-r--r--. 1 boincer umatlas     21161 Nov 21 09:08 stderr.txt
[2025-11-21 09:08:48] HITS file was successfully produced:
[2025-11-21 09:08:48] -rw-------. 1 boincer umatlas 922635326 Nov 21 09:07 shared/HITS.pool.root.1
[2025-11-21 09:08:48]  *** Contents of shared directory: ***
[2025-11-21 09:08:48] total 1311288
[2025-11-21 09:08:48] -rw-r--r--. 2 boincer umatlas 407386603 Nov 20 13:22 ATLAS.root_0
[2025-11-21 09:08:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 13:22 start_atlas.sh
[2025-11-21 09:08:48] -rw-r--r--. 2 boincer umatlas    590100 Nov 20 13:22 input.tar.gz
[2025-11-21 09:08:48] -rw-------. 1 boincer umatlas 922635326 Nov 21 09:07 HITS.pool.root.1
[2025-11-21 09:08:48] -rw-------. 1 boincer umatlas  12113920 Nov 21 09:08 result.tar.gz
09:08:49 (1872071): run_atlas exited; CPU time 301093.673476
09:08:49 (1872071): called boinc_finish(0)

</stderr_txt>
]]>

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