Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:59:22 (8791): wrapper (7.7.26015): starting
15:59:22 (8791): wrapper: running run_atlas (--nthreads 4)
[2025-11-21 15:59:22] Arguments: --nthreads 4
[2025-11-21 15:59:22] Threads: 4
[2025-11-21 15:59:22] Checking for CVMFS
[2025-11-21 15:59:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 15:59:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 15:59:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 15:59:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 15:59:23] 2.13.3.0 6033 20 33736 153131 1 1 3840003 4097025 0 130560 3 17 98.780 1293 114 http://cvmfs-egi.gridpp.rl.ac.uk:8000/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-21 15:59:23] CVMFS is ok
[2025-11-21 15:59:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 15:59:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 15:59:23] Further information can be found at the LHC@home message board.
[2025-11-21 15:59:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 15:59:23] Checking for apptainer binary...
[2025-11-21 15:59:23] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/var/lib/snapd/snap/bin)
[2025-11-21 15:59:23] apptainer is not installed, using version from CVMFS
[2025-11-21 15:59:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 15:59:24] pckeatlas07
[2025-11-21 15:59:24] apptainer works
[2025-11-21 15:59:24] Set ATHENA_PROC_NUMBER=4
[2025-11-21 15:59:24] Set ATHENA_CORE_NUMBER=4
[2025-11-21 15:59:24] Starting ATLAS job with PandaID=6893848748
[2025-11-21 15:59:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 05:41:02]  *** The last 200 lines of the pilot log: ***
[2025-11-22 05:41:02] 2025-11-22 04:40:24,445 | INFO     | monitor loop #3727: job 0:6893848748 is in state 'finished'
[2025-11-22 05:41:02] 2025-11-22 04:40:24,446 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 05:41:02] 2025-11-22 04:40:25,149 | INFO     | time since job start (49252s) is within the limit (172800.0s)
[2025-11-22 05:41:02] 2025-11-22 04:40:25,578 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 05:41:02] 2025-11-22 04:40:25,579 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3791.701
[2025-11-22 05:41:02] 2025-11-22 04:40:25,580 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6893848748/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 05:41:02] 2025-11-22 04:40:25,580 | INFO     | extracted standard info from prmon json
[2025-11-22 05:41:02] 2025-11-22 04:40:25,580 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 05:41:02] 2025-11-22 04:40:25,580 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 05:41:02] 2025-11-22 04:40:25,587 | INFO     | fitting pss+swap vs Time
[2025-11-22 05:41:02] 2025-11-22 04:40:25,588 | INFO     | sum of square deviations: 162966508588.0
[2025-11-22 05:41:02] 2025-11-22 04:40:25,596 | INFO     | sum of deviations: 573974639215.0
[2025-11-22 05:41:02] 2025-11-22 04:40:25,596 | INFO     | mean x: 1763761780.0
[2025-11-22 05:41:02] 2025-11-22 04:40:25,596 | INFO     | mean y: 2385339.43866171
[2025-11-22 05:41:02] 2025-11-22 04:40:25,596 | INFO     | intersect: -6209655036.88226
[2025-11-22 05:41:02] 2025-11-22 04:40:25,596 | INFO     | chi2: 2.730892872682105
[2025-11-22 05:41:02] 2025-11-22 04:40:25,597 | INFO     | sum of square deviations: 159956117260.5
[2025-11-22 05:41:02] 2025-11-22 04:40:25,604 | INFO     | sum of deviations: 683686165120.0
[2025-11-22 05:41:02] 2025-11-22 04:40:25,604 | INFO     | mean x: 1763761627.5
[2025-11-22 05:41:02] 2025-11-22 04:40:25,605 | INFO     | mean y: 2390883.6608478804
[2025-11-22 05:41:02] 2025-11-22 04:40:25,605 | INFO     | intersect: -7536298126.447196
[2025-11-22 05:41:02] 2025-11-22 04:40:25,605 | INFO     | chi2: 1.5056198924708353
[2025-11-22 05:41:02] 2025-11-22 04:40:25,605 | INFO     | current chi2=1.5056198924708353 (change=44.867119925062696 %)
[2025-11-22 05:41:02] 2025-11-22 04:40:25,606 | INFO     | sum of square deviations: 156983028958.0
[2025-11-22 05:41:02] 2025-11-22 04:40:25,613 | INFO     | sum of deviations: 679131069663.9989
[2025-11-22 05:41:02] 2025-11-22 04:40:25,613 | INFO     | mean x: 1763761475.0
[2025-11-22 05:41:02] 2025-11-22 04:40:25,613 | INFO     | mean y: 2390648.809284818
[2025-11-22 05:41:02] 2025-11-22 04:40:25,613 | INFO     | intersect: -7627894134.836814
[2025-11-22 05:41:02] 2025-11-22 04:40:25,614 | INFO     | chi2: 1.4979360272845548
[2025-11-22 05:41:02] 2025-11-22 04:40:25,614 | INFO     | current chi2=1.4979360272845548 (change=0.510345620744337 %)
[2025-11-22 05:41:02] 2025-11-22 04:40:25,614 | INFO     | right removable region: 796
[2025-11-22 05:41:02] 2025-11-22 04:40:25,614 | INFO     | sum of square deviations: 159956117260.5
[2025-11-22 05:41:02] 2025-11-22 04:40:25,622 | INFO     | sum of deviations: 463576841167.0
[2025-11-22 05:41:02] 2025-11-22 04:40:25,622 | INFO     | mean x: 1763761932.5
[2025-11-22 05:41:02] 2025-11-22 04:40:25,622 | INFO     | mean y: 2390914.880299252
[2025-11-22 05:41:02] 2025-11-22 04:40:25,622 | INFO     | intersect: -5109255949.536705
[2025-11-22 05:41:02] 2025-11-22 04:40:25,623 | INFO     | chi2: 1.404072211983685
[2025-11-22 05:41:02] 2025-11-22 04:40:25,623 | INFO     | current chi2=1.404072211983685 (change=48.5855990167532 %)
[2025-11-22 05:41:02] 2025-11-22 04:40:25,623 | INFO     | sum of square deviations: 156983028958.0
[2025-11-22 05:41:02] 2025-11-22 04:40:25,631 | INFO     | sum of deviations: 447219510302.0001
[2025-11-22 05:41:02] 2025-11-22 04:40:25,631 | INFO     | mean x: 1763762085.0
[2025-11-22 05:41:02] 2025-11-22 04:40:25,631 | INFO     | mean y: 2391754.5520702633
[2025-11-22 05:41:02] 2025-11-22 04:40:25,631 | INFO     | intersect: -5022283977.459516
[2025-11-22 05:41:02] 2025-11-22 04:40:25,631 | INFO     | chi2: 1.3969885980908505
[2025-11-22 05:41:02] 2025-11-22 04:40:25,631 | INFO     | current chi2=1.3969885980908505 (change=0.5045049558260774 %)
[2025-11-22 05:41:02] 2025-11-22 04:40:25,632 | INFO     | left removable region: 20
[2025-11-22 05:41:02] 2025-11-22 04:40:25,632 | INFO     | sum of square deviations: 144898158650.0
[2025-11-22 05:41:02] 2025-11-22 04:40:25,639 | INFO     | sum of deviations: 493044803821.99994
[2025-11-22 05:41:02] 2025-11-22 04:40:25,639 | INFO     | mean x: 1763762054.5
[2025-11-22 05:41:02] 2025-11-22 04:40:25,639 | INFO     | mean y: 2400230.3324742266
[2025-11-22 05:41:02] 2025-11-22 04:40:25,639 | INFO     | intersect: -5999150957.424046
[2025-11-22 05:41:02] 2025-11-22 04:40:25,640 | INFO     | chi2: 0.11186604344400435
[2025-11-22 05:41:02] 2025-11-22 04:40:25,640 | INFO     | current memory leak: 3.40 B/s (using 776 data points, chi2=0.11)
[2025-11-22 05:41:02] 2025-11-22 04:40:25,640 | INFO     | could have reported an average CPU frequency of 3711 MHz (31 samples)
[2025-11-22 05:41:02] 2025-11-22 04:40:25,640 | INFO     | ..............................
[2025-11-22 05:41:02] 2025-11-22 04:40:25,640 | INFO     | . Timing measurements:
[2025-11-22 05:41:02] 2025-11-22 04:40:25,640 | INFO     | . get job = 0 s
[2025-11-22 05:41:02] 2025-11-22 04:40:25,640 | INFO     | . initial setup = 1 s
[2025-11-22 05:41:02] 2025-11-22 04:40:25,640 | INFO     | . payload setup = 7 s
[2025-11-22 05:41:02] 2025-11-22 04:40:25,640 | INFO     | . stage-in = 0 s
[2025-11-22 05:41:02] 2025-11-22 04:40:25,641 | INFO     | . payload execution = 49218 s
[2025-11-22 05:41:02] 2025-11-22 04:40:25,641 | INFO     | . stage-out = 1 s
[2025-11-22 05:41:02] 2025-11-22 04:40:25,641 | INFO     | . log creation = 0 s
[2025-11-22 05:41:02] 2025-11-22 04:40:25,641 | INFO     | ..............................
[2025-11-22 05:41:02] 2025-11-22 04:40:25,689 | INFO     | 
[2025-11-22 05:41:02] 2025-11-22 04:40:25,689 | INFO     | job summary report
[2025-11-22 05:41:02] 2025-11-22 04:40:25,689 | INFO     | --------------------------------------------------
[2025-11-22 05:41:02] 2025-11-22 04:40:25,689 | INFO     | PanDA job id: 6893848748
[2025-11-22 05:41:02] 2025-11-22 04:40:25,689 | INFO     | task id: 47523449
[2025-11-22 05:41:02] 2025-11-22 04:40:25,689 | INFO     | errors: (none)
[2025-11-22 05:41:02] 2025-11-22 04:40:25,689 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 05:41:02] 2025-11-22 04:40:25,689 | INFO     | pilot state: finished 
[2025-11-22 05:41:02] 2025-11-22 04:40:25,689 | INFO     | transexitcode: 0
[2025-11-22 05:41:02] 2025-11-22 04:40:25,689 | INFO     | exeerrorcode: 0
[2025-11-22 05:41:02] 2025-11-22 04:40:25,689 | INFO     | exeerrordiag: 
[2025-11-22 05:41:02] 2025-11-22 04:40:25,689 | INFO     | exitcode: 0
[2025-11-22 05:41:02] 2025-11-22 04:40:25,689 | INFO     | exitmsg: OK
[2025-11-22 05:41:02] 2025-11-22 04:40:25,689 | INFO     | cpuconsumptiontime: 193774 s
[2025-11-22 05:41:02] 2025-11-22 04:40:25,689 | INFO     | nevents: 1000
[2025-11-22 05:41:02] 2025-11-22 04:40:25,690 | INFO     | neventsw: 0
[2025-11-22 05:41:02] 2025-11-22 04:40:25,690 | INFO     | pid: 20049
[2025-11-22 05:41:02] 2025-11-22 04:40:25,690 | INFO     | pgrp: 20049
[2025-11-22 05:41:02] 2025-11-22 04:40:25,690 | INFO     | corecount: 4
[2025-11-22 05:41:02] 2025-11-22 04:40:25,690 | INFO     | event service: False
[2025-11-22 05:41:02] 2025-11-22 04:40:25,690 | INFO     | sizes: {0: 2298750, 1: 2298778, 3: 2299040, 11: 2299068, 49229: 2347616, 49231: 2356610, 49234: 2356794, 49239: 2357040}
[2025-11-22 05:41:02] 2025-11-22 04:40:25,690 | INFO     | --------------------------------------------------
[2025-11-22 05:41:02] 2025-11-22 04:40:25,690 | INFO     | 
[2025-11-22 05:41:02] 2025-11-22 04:40:25,690 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-22 05:41:02] 2025-11-22 04:40:25,698 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 05:41:02] 2025-11-22 04:40:25,699 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 05:41:02] 2025-11-22 04:40:25,699 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 05:41:02] 2025-11-22 04:40:25,699 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 05:41:02] 2025-11-22 04:40:25,699 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 05:41:02] 2025-11-22 04:40:25,699 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 05:41:02] 2025-11-22 04:40:25,699 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 05:41:02] 2025-11-22 04:40:25,699 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 05:41:02] 2025-11-22 04:40:25,699 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 05:41:02] 2025-11-22 04:40:25,699 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 05:41:02] 2025-11-22 04:40:25,699 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 05:41:02] 2025-11-22 04:40:25,699 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 05:41:02] 2025-11-22 04:40:25,699 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 05:41:02] 2025-11-22 04:40:25,699 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 05:41:02] 2025-11-22 04:40:25,699 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 05:41:02] 2025-11-22 04:40:25,699 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 05:41:02] 2025-11-22 04:40:25,699 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 05:41:02] 2025-11-22 04:40:25,700 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 05:41:02] 2025-11-22 04:40:25,700 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 05:41:02] 2025-11-22 04:40:25,700 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 05:41:02] 2025-11-22 04:40:25,700 | INFO     | job 6893848748 has completed (purged errors)
[2025-11-22 05:41:02] 2025-11-22 04:40:25,700 | INFO     | overall cleanup function is called
[2025-11-22 05:41:02] 2025-11-22 04:40:26,709 | INFO     | --- collectZombieJob: --- 10, [20049]
[2025-11-22 05:41:02] 2025-11-22 04:40:26,709 | INFO     | zombie collector waiting for pid 20049
[2025-11-22 05:41:02] 2025-11-22 04:40:26,709 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 05:41:02] 2025-11-22 04:40:26,709 | INFO     | collected zombie processes
[2025-11-22 05:41:02] 2025-11-22 04:40:26,709 | INFO     | will attempt to kill all subprocesses of pid=20049
[2025-11-22 05:41:02] 2025-11-22 04:40:26,749 | INFO     | process IDs to be killed: [20049] (in reverse order)
[2025-11-22 05:41:02] 2025-11-22 04:40:26,766 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 05:41:02] 2025-11-22 04:40:26,767 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 05:41:02] 2025-11-22 04:40:26,768 | INFO     | did not find any defunct processes belonging to 20049
[2025-11-22 05:41:02] 2025-11-22 04:40:26,769 | INFO     | did not find any defunct processes belonging to 20049
[2025-11-22 05:41:02] 2025-11-22 04:40:26,769 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 05:41:02] 2025-11-22 04:40:26,770 | INFO     | ready for new job
[2025-11-22 05:41:02] 2025-11-22 04:40:26,770 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 05:41:02] 2025-11-22 04:40:26,771 | INFO     | ***************************************
[2025-11-22 05:41:02] 2025-11-22 04:40:26,771 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 05:41:02] 2025-11-22 04:40:26,771 | INFO     | ***************************************
[2025-11-22 05:41:02] 2025-11-22 04:40:26,771 | INFO     | 
[2025-11-22 05:41:02] 2025-11-22 04:40:26,771 | INFO     | architecture information:
[2025-11-22 05:41:02] 2025-11-22 04:40:26,772 | INFO     | executing command: cat /etc/os-release
[2025-11-22 05:41:02] 2025-11-22 04:40:26,805 | INFO     | cat /etc/os-release:
[2025-11-22 05:41:02] NAME="CentOS Linux"
[2025-11-22 05:41:02] VERSION="7 (Core)"
[2025-11-22 05:41:02] ID="centos"
[2025-11-22 05:41:02] ID_LIKE="rhel fedora"
[2025-11-22 05:41:02] VERSION_ID="7"
[2025-11-22 05:41:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 05:41:02] ANSI_COLOR="0;31"
[2025-11-22 05:41:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 05:41:02] HOME_URL="https://www.centos.org/"
[2025-11-22 05:41:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 05:41:02] 
[2025-11-22 05:41:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 05:41:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 05:41:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 05:41:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 05:41:02] 
[2025-11-22 05:41:02] 2025-11-22 04:40:26,805 | INFO     | ***************************************
[2025-11-22 05:41:02] 2025-11-22 04:40:27,308 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-22 05:41:02] 2025-11-22 04:40:27,315 | INFO     | sufficient remaining disk space (329200435200 B)
[2025-11-22 05:41:02] 2025-11-22 04:40:27,315 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 05:41:02] 2025-11-22 04:40:27,315 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 05:41:02] 2025-11-22 04:40:27,315 | INFO     | update_server=False
[2025-11-22 05:41:02] 2025-11-22 04:40:27,315 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 05:41:02] 2025-11-22 04:40:27,315 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 05:41:02] 2025-11-22 04:40:27,636 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 05:41:02] 2025-11-22 04:40:27,947 | INFO     | all payload control threads have been joined
[2025-11-22 05:41:02] 2025-11-22 04:40:27,954 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 05:41:02] 2025-11-22 04:40:27,954 | INFO     | aborting loop
[2025-11-22 05:41:02] 2025-11-22 04:40:28,161 | INFO     | all data control threads have been joined
[2025-11-22 05:41:02] 2025-11-22 04:40:28,172 | INFO     | all job control threads have been joined
[2025-11-22 05:41:02] 2025-11-22 04:40:28,319 | INFO     | [job] retrieve thread has finished
[2025-11-22 05:41:02] 2025-11-22 04:40:28,320 | INFO     | [job] queue monitor thread has finished
[2025-11-22 05:41:02] 2025-11-22 04:40:28,449 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 05:41:02] 2025-11-22 04:40:28,829 | INFO     | [job] validate thread has finished
[2025-11-22 05:41:02] 2025-11-22 04:40:28,953 | INFO     | [payload] control thread has finished
[2025-11-22 05:41:02] 2025-11-22 04:40:28,959 | INFO     | [job] job monitor thread has finished
[2025-11-22 05:41:02] 2025-11-22 04:40:29,026 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 05:41:02] 2025-11-22 04:40:29,130 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 05:41:02] 2025-11-22 04:40:29,167 | INFO     | [data] control thread has finished
[2025-11-22 05:41:02] 2025-11-22 04:40:29,177 | INFO     | [job] control thread has finished
[2025-11-22 05:41:02] 2025-11-22 04:40:29,290 | INFO     | [payload] validate_post thread has finished
[2025-11-22 05:41:02] 2025-11-22 04:40:29,541 | INFO     | [data] copytool_in thread has finished
[2025-11-22 05:41:02] 2025-11-22 04:40:29,641 | INFO     | [data] copytool_out thread has finished
[2025-11-22 05:41:02] 2025-11-22 04:40:29,680 | INFO     | [payload] failed_post thread has finished
[2025-11-22 05:41:02] 2025-11-22 04:40:30,798 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 05:41:02] 2025-11-22 04:40:34,804 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 05:41:02] 2025-11-22 04:40:37,647 | INFO     | job.realtimelogging is not enabled
[2025-11-22 05:41:02] 2025-11-22 04:40:38,648 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 05:41:02] 2025-11-22 04:40:55,103 | INFO     | [monitor] cgroup control has ended
[2025-11-22 05:41:02] 2025-11-22 04:40:56,202 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140398770247488)>', '<ExcThread(monitor, started 140398211081984)>']
[2025-11-22 05:41:02] 2025-11-22 04:40:58,268 | INFO     | PID=12857 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 05:41:02] 2025-11-22 04:40:58,269 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 05:41:02] 2025-11-22 04:40:58,269 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 05:41:02] 2025-11-22 04:40:58,269 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 05:41:02] 2025-11-22 04:40:58,269 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 05:41:02] 2025-11-22 04:40:58,269 | INFO     | [monitor] control thread has ended
[2025-11-22 05:41:02] 2025-11-22 04:41:01,211 | INFO     | all workflow threads have been joined
[2025-11-22 05:41:02] 2025-11-22 04:41:01,211 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 05:41:02] 2025-11-22 04:41:01,211 | INFO     | traces error code: 0
[2025-11-22 05:41:02] 2025-11-22 04:41:01,211 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 05:41:02] 2025-11-22 04:41:01,809 [wrapper] ==== pilot stdout END ====
[2025-11-22 05:41:02] 2025-11-22 04:41:01,810 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 05:41:02] 2025-11-22 04:41:01,811 [wrapper] pilotpid: 12857
[2025-11-22 05:41:02] 2025-11-22 04:41:01,812 [wrapper] Pilot exit status: 0
[2025-11-22 05:41:02] 2025-11-22 04:41:01,837 [wrapper] pandaids: 6893848748
[2025-11-22 05:41:02] 2025-11-22 04:41:01,847 [wrapper] cleanup supervisor_pilot  179069 12858
[2025-11-22 05:41:02] 2025-11-22 04:41:01,849 [wrapper] Test setup, not cleaning
[2025-11-22 05:41:02] 2025-11-22 04:41:01,850 [wrapper] apfmon messages muted
[2025-11-22 05:41:02] 2025-11-22 04:41:01,851 [wrapper] ==== wrapper stdout END ====
[2025-11-22 05:41:02] 2025-11-22 04:41:01,852 [wrapper] ==== wrapper stderr END ====
[2025-11-22 05:41:02]  *** Error codes and diagnostics ***
[2025-11-22 05:41:02]     "exeErrorCode": 0,
[2025-11-22 05:41:02]     "exeErrorDiag": "",
[2025-11-22 05:41:02]     "pilotErrorCode": 0,
[2025-11-22 05:41:02]     "pilotErrorDiag": "",
[2025-11-22 05:41:02]  *** Listing of results directory ***
[2025-11-22 05:41:02] total 1325492
[2025-11-22 05:41:02] -rw-r--r-- 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-22 05:41:02] -rwx------ 1 boinc boinc     36292 Nov 20 11:53 runpilot2-wrapper.sh
[2025-11-22 05:41:02] -rw-r--r-- 1 boinc boinc      5112 Nov 20 11:53 queuedata.json
[2025-11-22 05:41:02] -rw-r--r-- 1 boinc boinc       100 Nov 21 15:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 05:41:02] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 15:59 run_atlas
[2025-11-22 05:41:02] -rw-r--r-- 1 boinc boinc       105 Nov 21 15:59 job.xml
[2025-11-22 05:41:02] -rw-r--r-- 2 boinc boinc 412387715 Nov 21 15:59 EVNT.47493127._000292.pool.root.1
[2025-11-22 05:41:02] drwxrwx--x 2 boinc boinc        68 Nov 21 15:59 shared
[2025-11-22 05:41:02] -rw-r--r-- 2 boinc boinc    590101 Nov 21 15:59 input.tar.gz
[2025-11-22 05:41:02] -rw-r--r-- 2 boinc boinc     15847 Nov 21 15:59 start_atlas.sh
[2025-11-22 05:41:02] -rw-r--r-- 1 boinc boinc         0 Nov 21 15:59 boinc_lockfile
[2025-11-22 05:41:02] -rw-r--r-- 1 boinc boinc      2782 Nov 21 15:59 pandaJob.out
[2025-11-22 05:41:02] -rw------- 1 boinc boinc    989798 Nov 21 15:59 agis_schedconf.cvmfs.json
[2025-11-22 05:41:02] drwx------ 5 boinc boinc      4096 Nov 21 15:59 pilot3
[2025-11-22 05:41:02] -rw-r--r-- 1 boinc boinc      6320 Nov 21 16:49 init_data.xml
[2025-11-22 05:41:02] -rw-r--r-- 1 boinc boinc       532 Nov 22 05:34 boinc_task_state.xml
[2025-11-22 05:41:02] -rw------- 1 boinc boinc 924188104 Nov 22 05:39 HITS.47523449._002911.pool.root.1
[2025-11-22 05:41:02] -rw------- 1 boinc boinc        95 Nov 22 05:40 pilot_heartbeat.json
[2025-11-22 05:41:02] -rw------- 1 boinc boinc      1039 Nov 22 05:40 memory_monitor_summary.json
[2025-11-22 05:41:02] -rw------- 1 boinc boinc   1526164 Nov 22 05:40 agis_ddmendpoints.agis.ALL.json
[2025-11-22 05:41:02] -rw------- 1 boinc boinc   1538175 Nov 22 05:40 log.47523449._002911.job.log.tgz.1
[2025-11-22 05:41:02] -rw------- 1 boinc boinc      8605 Nov 22 05:40 heartbeat.json
[2025-11-22 05:41:02] -rw-r--r-- 1 boinc boinc      8192 Nov 22 05:40 boinc_mmap_file
[2025-11-22 05:41:02] -rw-r--r-- 1 boinc boinc        29 Nov 22 05:40 wrapper_checkpoint.txt
[2025-11-22 05:41:02] -rw------- 1 boinc boinc      4819 Nov 22 05:41 pilotlog.txt
[2025-11-22 05:41:02] -rw------- 1 boinc boinc   6874537 Nov 22 05:41 log.47523449._002911.job.log.1
[2025-11-22 05:41:02] -rw------- 1 boinc boinc       353 Nov 22 05:41 output.list
[2025-11-22 05:41:02] -rw-r--r-- 1 boinc boinc       620 Nov 22 05:41 runtime_log
[2025-11-22 05:41:02] -rw------- 1 boinc boinc   8427520 Nov 22 05:41 result.tar.gz
[2025-11-22 05:41:02] -rw-r--r-- 1 boinc boinc      8817 Nov 22 05:41 runtime_log.err
[2025-11-22 05:41:02] -rw------- 1 boinc boinc       662 Nov 22 05:41 h2qMDmgTHg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAUGKDmTkBqDn.diag
[2025-11-22 05:41:02] -rw-r--r-- 1 boinc boinc     21327 Nov 22 05:41 stderr.txt
[2025-11-22 05:41:02] HITS file was successfully produced:
[2025-11-22 05:41:02] -rw------- 1 boinc boinc 924188104 Nov 22 05:39 shared/HITS.pool.root.1
[2025-11-22 05:41:02]  *** Contents of shared directory: ***
[2025-11-22 05:41:02] total 1314080
[2025-11-22 05:41:02] -rw-r--r-- 2 boinc boinc 412387715 Nov 21 15:59 ATLAS.root_0
[2025-11-22 05:41:02] -rw-r--r-- 2 boinc boinc    590101 Nov 21 15:59 input.tar.gz
[2025-11-22 05:41:02] -rw-r--r-- 2 boinc boinc     15847 Nov 21 15:59 start_atlas.sh
[2025-11-22 05:41:02] -rw------- 1 boinc boinc 924188104 Nov 22 05:39 HITS.pool.root.1
[2025-11-22 05:41:02] -rw------- 1 boinc boinc   8427520 Nov 22 05:41 result.tar.gz
05:41:03 (8791): run_atlas exited; CPU time 193997.005681
05:41:03 (8791): called boinc_finish(0)

</stderr_txt>
]]>

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