Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:09 (3470775): wrapper (7.7.26015): starting
00:00:09 (3470775): wrapper: running run_atlas (--nthreads 9)
[2025-11-21 00:00:09] Arguments: --nthreads 9
[2025-11-21 00:00:09] Threads: 9
[2025-11-21 00:00:09] Checking for CVMFS
[2025-11-21 00:00:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 00:00:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 00:00:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 00:00:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 00:00:14] 2.13.3.0 9890 22268 328552 153108 1 303 27964806 32935937 14783 16776704 0 142607577 99.799 74330820 35236 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-21 00:00:14] CVMFS is ok
[2025-11-21 00:00:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 00:00:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 00:00:14] Further information can be found at the LHC@home message board.
[2025-11-21 00:00:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 00:00:14] Checking for apptainer binary...
[2025-11-21 00:00:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 00:00:14] Running /usr/bin/apptainer --version
[2025-11-21 00:00:14] apptainer version 1.4.4-1.el9
[2025-11-21 00:00:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 00:00:16] c-8-36.aglt2.org
[2025-11-21 00:00:16] apptainer works
[2025-11-21 00:00:16] Set ATHENA_PROC_NUMBER=9
[2025-11-21 00:00:16] Set ATHENA_CORE_NUMBER=9
[2025-11-21 00:00:17] Starting ATLAS job with PandaID=6893849648
[2025-11-21 00:00:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 22:52:27]  *** The last 200 lines of the pilot log: ***
[2025-11-22 22:52:27] 2025-11-23 03:51:39,064 | INFO     | time since job start (168554s) is within the limit (172800.0s)
[2025-11-22 22:52:27] 2025-11-23 03:51:41,125 | INFO     | time since job start (168556s) is within the limit (172800.0s)
[2025-11-22 22:52:27] 2025-11-23 03:51:41,635 | INFO     | monitor loop #8315: job 0:6893849648 is in state 'finished'
[2025-11-22 22:52:27] 2025-11-23 03:51:41,635 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 22:52:27] 2025-11-23 03:51:43,139 | INFO     | time since job start (168558s) is within the limit (172800.0s)
[2025-11-22 22:52:27] 2025-11-23 03:51:44,246 | INFO     | monitor loop #8316: job 0:6893849648 is in state 'finished'
[2025-11-22 22:52:27] 2025-11-23 03:51:44,246 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 22:52:27] 2025-11-23 03:51:45,157 | INFO     | time since job start (168560s) is within the limit (172800.0s)
[2025-11-22 22:52:27] 2025-11-23 03:51:46,791 | INFO     | monitor loop #8317: job 0:6893849648 is in state 'finished'
[2025-11-22 22:52:27] 2025-11-23 03:51:46,791 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 22:52:27] 2025-11-23 03:51:47,166 | INFO     | time since job start (168562s) is within the limit (172800.0s)
[2025-11-22 22:52:27] 2025-11-23 03:51:49,183 | INFO     | time since job start (168564s) is within the limit (172800.0s)
[2025-11-22 22:52:27] 2025-11-23 03:51:49,365 | INFO     | monitor loop #8318: job 0:6893849648 is in state 'finished'
[2025-11-22 22:52:27] 2025-11-23 03:51:49,365 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 22:52:27] 2025-11-23 03:51:49,742 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 22:52:27] 2025-11-23 03:51:49,773 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1915999999997
[2025-11-22 22:52:27] 2025-11-23 03:51:49,864 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6893849648/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 22:52:27] 2025-11-23 03:51:49,865 | INFO     | extracted standard info from prmon json
[2025-11-22 22:52:27] 2025-11-23 03:51:49,865 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 22:52:27] 2025-11-23 03:51:49,865 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 22:52:27] 2025-11-23 03:51:49,915 | INFO     | fitting pss+swap vs Time
[2025-11-22 22:52:27] 2025-11-23 03:51:49,919 | INFO     | sum of square deviations: 6511955230591.862
[2025-11-22 22:52:27] 2025-11-23 03:51:50,292 | INFO     | sum of deviations: 15924477814997.605
[2025-11-22 22:52:27] 2025-11-23 03:51:50,293 | INFO     | mean x: 1763785695.3175063
[2025-11-22 22:52:27] 2025-11-23 03:51:50,293 | INFO     | mean y: 3087470.5781080103
[2025-11-22 22:52:27] 2025-11-23 03:51:50,293 | INFO     | intersect: -4310112663.775539
[2025-11-22 22:52:27] 2025-11-23 03:51:50,297 | INFO     | chi2: 28.580804262273382
[2025-11-22 22:52:27] 2025-11-23 03:51:50,301 | INFO     | sum of square deviations: 6476617971848.409
[2025-11-22 22:52:27] 2025-11-23 03:51:51,132 | INFO     | sum of deviations: 16896996983943.45
[2025-11-22 22:52:27] 2025-11-23 03:51:51,132 | INFO     | mean x: 1763785542.8267975
[2025-11-22 22:52:27] 2025-11-23 03:51:51,132 | INFO     | mean y: 3091666.9444444445
[2025-11-22 22:52:27] 2025-11-23 03:51:51,133 | INFO     | intersect: -4598488838.036592
[2025-11-22 22:52:27] 2025-11-23 03:51:51,136 | INFO     | chi2: 25.454294432455846
[2025-11-22 22:52:27] 2025-11-23 03:51:51,136 | INFO     | current chi2=25.454294432455846 (change=10.939194716589988 %)
[2025-11-22 22:52:27] 2025-11-23 03:51:51,136 | INFO     | right removable region: 2753
[2025-11-22 22:52:27] 2025-11-23 03:51:51,140 | INFO     | sum of square deviations: 6476609190827.729
[2025-11-22 22:52:27] 2025-11-23 03:51:51,196 | INFO     | time since job start (168566s) is within the limit (172800.0s)
[2025-11-22 22:52:27] 2025-11-23 03:51:51,640 | INFO     | sum of deviations: 14763097447230.676
[2025-11-22 22:52:27] 2025-11-23 03:51:51,640 | INFO     | mean x: 1763785847.8271606
[2025-11-22 22:52:27] 2025-11-23 03:51:51,641 | INFO     | mean y: 3092481.2156862747
[2025-11-22 22:52:27] 2025-11-23 03:51:51,641 | INFO     | intersect: -4017366617.103152
[2025-11-22 22:52:27] 2025-11-23 03:51:51,671 | INFO     | chi2: 24.65889466397546
[2025-11-22 22:52:27] 2025-11-23 03:51:51,702 | INFO     | current chi2=24.65889466397546 (change=13.722180671713419 %)
[2025-11-22 22:52:27] 2025-11-23 03:51:51,702 | INFO     | left removable region: 10
[2025-11-22 22:52:27] 2025-11-23 03:51:51,720 | INFO     | sum of square deviations: 6399309043224.516
[2025-11-22 22:52:27] 2025-11-23 03:51:52,063 | INFO     | monitor loop #8319: job 0:6893849648 is in state 'finished'
[2025-11-22 22:52:27] 2025-11-23 03:51:52,063 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 22:52:27] 2025-11-23 03:51:52,650 | INFO     | sum of deviations: 14884956670124.893
[2025-11-22 22:52:27] 2025-11-23 03:51:52,650 | INFO     | mean x: 1763785817.3481588
[2025-11-22 22:52:27] 2025-11-23 03:51:52,650 | INFO     | mean y: 3101989.641997813
[2025-11-22 22:52:27] 2025-11-23 03:51:52,651 | INFO     | intersect: -4099508978.0851097
[2025-11-22 22:52:27] 2025-11-23 03:51:52,658 | INFO     | chi2: 17.92764413479594
[2025-11-22 22:52:27] 2025-11-23 03:51:52,659 | INFO     | current memory leak: 2.33 B/s (using 2743 data points, chi2=17.93)
[2025-11-22 22:52:27] 2025-11-23 03:51:52,665 | INFO     | could have reported an average CPU frequency of 2600 MHz (94 samples)
[2025-11-22 22:52:27] 2025-11-23 03:51:52,666 | INFO     | ..............................
[2025-11-22 22:52:27] 2025-11-23 03:51:52,666 | INFO     | . Timing measurements:
[2025-11-22 22:52:27] 2025-11-23 03:51:52,666 | INFO     | . get job = 0 s
[2025-11-22 22:52:27] 2025-11-23 03:51:52,666 | INFO     | . initial setup = 17 s
[2025-11-22 22:52:27] 2025-11-23 03:51:52,666 | INFO     | . payload setup = 73 s
[2025-11-22 22:52:27] 2025-11-23 03:51:52,666 | INFO     | . stage-in = 0 s
[2025-11-22 22:52:27] 2025-11-23 03:51:52,666 | INFO     | . payload execution = 168314 s
[2025-11-22 22:52:27] 2025-11-23 03:51:52,666 | INFO     | . stage-out = 12 s
[2025-11-22 22:52:27] 2025-11-23 03:51:52,666 | INFO     | . log creation = 5 s
[2025-11-22 22:52:27] 2025-11-23 03:51:52,667 | INFO     | ..............................
[2025-11-22 22:52:27] 2025-11-23 03:51:52,903 | INFO     | 
[2025-11-22 22:52:27] 2025-11-23 03:51:52,903 | INFO     | job summary report
[2025-11-22 22:52:27] 2025-11-23 03:51:52,903 | INFO     | --------------------------------------------------
[2025-11-22 22:52:27] 2025-11-23 03:51:52,903 | INFO     | PanDA job id: 6893849648
[2025-11-22 22:52:27] 2025-11-23 03:51:52,904 | INFO     | task id: 47523449
[2025-11-22 22:52:27] 2025-11-23 03:51:52,904 | INFO     | errors: (none)
[2025-11-22 22:52:27] 2025-11-23 03:51:52,904 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 22:52:27] 2025-11-23 03:51:52,904 | INFO     | pilot state: finished 
[2025-11-22 22:52:27] 2025-11-23 03:51:52,904 | INFO     | transexitcode: 0
[2025-11-22 22:52:27] 2025-11-23 03:51:52,904 | INFO     | exeerrorcode: 0
[2025-11-22 22:52:27] 2025-11-23 03:51:52,904 | INFO     | exeerrordiag: 
[2025-11-22 22:52:27] 2025-11-23 03:51:52,904 | INFO     | exitcode: 0
[2025-11-22 22:52:27] 2025-11-23 03:51:52,904 | INFO     | exitmsg: OK
[2025-11-22 22:52:27] 2025-11-23 03:51:52,905 | INFO     | cpuconsumptiontime: 302697 s
[2025-11-22 22:52:27] 2025-11-23 03:51:52,905 | INFO     | nevents: 1000
[2025-11-22 22:52:27] 2025-11-23 03:51:52,905 | INFO     | neventsw: 0
[2025-11-22 22:52:27] 2025-11-23 03:51:52,905 | INFO     | pid: 3501804
[2025-11-22 22:52:27] 2025-11-23 03:51:52,905 | INFO     | pgrp: 3501804
[2025-11-22 22:52:27] 2025-11-23 03:51:52,905 | INFO     | corecount: 9
[2025-11-22 22:52:27] 2025-11-23 03:51:52,905 | INFO     | event service: False
[2025-11-22 22:52:27] 2025-11-23 03:51:52,905 | INFO     | sizes: {0: 2298529, 1: 2298585, 2: 2298812, 3: 2298812, 14: 2298840, 25: 2298868, 37: 2299024, 50: 2299052, 61: 2299080, 62: 2299370, 72: 2299398, 168391: 2398126,
[2025-11-22 22:52:27] 2025-11-23 03:51:52,905 | INFO     | --------------------------------------------------
[2025-11-22 22:52:27] 2025-11-23 03:51:52,905 | INFO     | 
[2025-11-22 22:52:27] 2025-11-23 03:51:52,906 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-22 22:52:27] 2025-11-23 03:51:52,990 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 22:52:27] 2025-11-23 03:51:52,991 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 22:52:27] 2025-11-23 03:51:52,991 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 22:52:27] 2025-11-23 03:51:52,991 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 22:52:27] 2025-11-23 03:51:52,991 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 22:52:27] 2025-11-23 03:51:52,991 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 22:52:27] 2025-11-23 03:51:52,991 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 22:52:27] 2025-11-23 03:51:52,991 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 22:52:27] 2025-11-23 03:51:52,991 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 22:52:27] 2025-11-23 03:51:52,992 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 22:52:27] 2025-11-23 03:51:52,992 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 22:52:27] 2025-11-23 03:51:52,992 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 22:52:27] 2025-11-23 03:51:52,992 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 22:52:27] 2025-11-23 03:51:52,992 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 22:52:27] 2025-11-23 03:51:52,992 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 22:52:27] 2025-11-23 03:51:52,992 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 22:52:27] 2025-11-23 03:51:52,992 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 22:52:27] 2025-11-23 03:51:52,992 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 22:52:27] 2025-11-23 03:51:52,993 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 22:52:27] 2025-11-23 03:51:52,993 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 22:52:27] 2025-11-23 03:51:52,997 | INFO     | job 6893849648 has completed (purged errors)
[2025-11-22 22:52:27] 2025-11-23 03:51:52,997 | INFO     | overall cleanup function is called
[2025-11-22 22:52:27] 2025-11-23 03:51:54,024 | INFO     | --- collectZombieJob: --- 10, [3501804]
[2025-11-22 22:52:27] 2025-11-23 03:51:54,024 | INFO     | zombie collector waiting for pid 3501804
[2025-11-22 22:52:27] 2025-11-23 03:51:54,024 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 22:52:27] 2025-11-23 03:51:54,024 | INFO     | collected zombie processes
[2025-11-22 22:52:27] 2025-11-23 03:51:54,025 | INFO     | will attempt to kill all subprocesses of pid=3501804
[2025-11-22 22:52:27] 2025-11-23 03:51:54,972 | INFO     | process IDs to be killed: [3501804] (in reverse order)
[2025-11-22 22:52:27] 2025-11-23 03:51:55,280 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 22:52:27] 2025-11-23 03:51:55,280 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 22:52:27] 2025-11-23 03:51:55,305 | INFO     | did not find any defunct processes belonging to 3501804
[2025-11-22 22:52:27] 2025-11-23 03:51:55,340 | INFO     | did not find any defunct processes belonging to 3501804
[2025-11-22 22:52:27] 2025-11-23 03:51:55,350 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 22:52:27] 2025-11-23 03:51:55,350 | INFO     | ready for new job
[2025-11-22 22:52:27] 2025-11-23 03:51:55,350 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 22:52:27] 2025-11-23 03:51:55,371 | INFO     | ***************************************
[2025-11-22 22:52:27] 2025-11-23 03:51:55,371 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 22:52:27] 2025-11-23 03:51:55,372 | INFO     | ***************************************
[2025-11-22 22:52:27] 2025-11-23 03:51:55,372 | INFO     | 
[2025-11-22 22:52:27] 2025-11-23 03:51:55,373 | INFO     | architecture information:
[2025-11-22 22:52:27] 2025-11-23 03:51:55,386 | INFO     | executing command: cat /etc/os-release
[2025-11-22 22:52:27] 2025-11-23 03:51:55,559 | INFO     | cat /etc/os-release:
[2025-11-22 22:52:27] NAME="CentOS Linux"
[2025-11-22 22:52:27] VERSION="7 (Core)"
[2025-11-22 22:52:27] ID="centos"
[2025-11-22 22:52:27] ID_LIKE="rhel fedora"
[2025-11-22 22:52:27] VERSION_ID="7"
[2025-11-22 22:52:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 22:52:27] ANSI_COLOR="0;31"
[2025-11-22 22:52:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 22:52:27] HOME_URL="https://www.centos.org/"
[2025-11-22 22:52:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 22:52:27] 
[2025-11-22 22:52:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 22:52:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 22:52:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 22:52:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 22:52:27] 
[2025-11-22 22:52:27] 2025-11-23 03:51:55,560 | INFO     | ***************************************
[2025-11-22 22:52:27] 2025-11-23 03:51:56,064 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-22 22:52:27] 2025-11-23 03:51:56,096 | INFO     | sufficient remaining disk space (71867301888 B)
[2025-11-22 22:52:27] 2025-11-23 03:51:56,097 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 22:52:27] 2025-11-23 03:51:56,097 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 22:52:27] 2025-11-23 03:51:56,097 | INFO     | update_server=False
[2025-11-22 22:52:27] 2025-11-23 03:51:56,098 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 22:52:27] 2025-11-23 03:51:56,101 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 22:52:27] 2025-11-23 03:51:56,101 | INFO     | aborting loop
[2025-11-22 22:52:27] 2025-11-23 03:51:56,350 | INFO     | all job control threads have been joined
[2025-11-22 22:52:27] 2025-11-23 03:51:56,453 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 22:52:27] 2025-11-23 03:51:56,607 | INFO     | all data control threads have been joined
[2025-11-22 22:52:27] 2025-11-23 03:51:56,747 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 22:52:27] 2025-11-23 03:51:57,104 | INFO     | [job] retrieve thread has finished
[2025-11-22 22:52:27] 2025-11-23 03:51:57,144 | INFO     | all payload control threads have been joined
[2025-11-22 22:52:27] 2025-11-23 03:51:57,145 | INFO     | [job] job monitor thread has finished
[2025-11-22 22:52:27] 2025-11-23 03:51:57,373 | INFO     | [job] control thread has finished
[2025-11-22 22:52:27] 2025-11-23 03:51:57,458 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 22:52:27] 2025-11-23 03:51:57,581 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 22:52:27] 2025-11-23 03:51:57,620 | INFO     | [job] validate thread has finished
[2025-11-22 22:52:27] 2025-11-23 03:51:57,647 | INFO     | [data] control thread has finished
[2025-11-22 22:52:27] 2025-11-23 03:51:57,922 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 22:52:27] 2025-11-23 03:51:57,946 | INFO     | [payload] failed_post thread has finished
[2025-11-22 22:52:27] 2025-11-23 03:51:58,150 | INFO     | [payload] control thread has finished
[2025-11-22 22:52:27] 2025-11-23 03:51:58,285 | INFO     | [data] copytool_in thread has finished
[2025-11-22 22:52:27] 2025-11-23 03:51:58,297 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 22:52:27] 2025-11-23 03:51:58,460 | INFO     | [data] copytool_out thread has finished
[2025-11-22 22:52:27] 2025-11-23 03:51:58,591 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 22:52:27] 2025-11-23 03:51:58,684 | INFO     | [payload] validate_post thread has finished
[2025-11-22 22:52:27] 2025-11-23 03:51:58,945 | INFO     | [job] queue monitor thread has finished
[2025-11-22 22:52:27] 2025-11-23 03:52:00,758 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 22:52:27] 2025-11-23 03:52:04,764 | INFO     | [monitor] cgroup control has ended
[2025-11-22 22:52:27] 2025-11-23 03:52:05,817 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139979366119232)>', '<ExcThread(monitor, started 139978730358528)>']
[2025-11-22 22:52:27] 2025-11-23 03:52:10,843 | INFO     | all workflow threads have been joined
[2025-11-22 22:52:27] 2025-11-23 03:52:10,844 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 22:52:27] 2025-11-23 03:52:10,845 | INFO     | traces error code: 0
[2025-11-22 22:52:27] 2025-11-23 03:52:10,845 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 22:52:27] 2025-11-23 03:52:25,871 | INFO     | PID=3483146 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 22:52:27] 2025-11-23 03:52:25,871 | INFO     | .. there are 33 such processes running
[2025-11-22 22:52:27] 2025-11-23 03:52:25,872 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 22:52:27] 2025-11-23 03:52:25,872 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 22:52:27] 2025-11-23 03:52:25,915 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 22:52:27] 2025-11-23 03:52:25,915 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 22:52:27] 2025-11-23 03:52:25,915 | INFO     | [monitor] control thread has ended
[2025-11-22 22:52:27] 2025-11-23 03:52:26,541 [wrapper] ==== pilot stdout END ====
[2025-11-22 22:52:27] 2025-11-23 03:52:26,589 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 22:52:27] 2025-11-23 03:52:26,642 [wrapper] pilotpid: 3483146
[2025-11-22 22:52:27] 2025-11-23 03:52:26,719 [wrapper] Pilot exit status: 0
[2025-11-22 22:52:27] 2025-11-23 03:52:26,836 [wrapper] pandaids: 6893849648
[2025-11-22 22:52:27] 2025-11-23 03:52:27,038 [wrapper] cleanup supervisor_pilot  324961 3483147
[2025-11-22 22:52:27] 2025-11-23 03:52:27,051 [wrapper] Test setup, not cleaning
[2025-11-22 22:52:27] 2025-11-23 03:52:27,071 [wrapper] apfmon messages muted
[2025-11-22 22:52:27] 2025-11-23 03:52:27,134 [wrapper] ==== wrapper stdout END ====
[2025-11-22 22:52:27] 2025-11-23 03:52:27,157 [wrapper] ==== wrapper stderr END ====
[2025-11-22 22:52:27]  *** Error codes and diagnostics ***
[2025-11-22 22:52:27]     "exeErrorCode": 0,
[2025-11-22 22:52:27]     "exeErrorDiag": "",
[2025-11-22 22:52:27]     "pilotErrorCode": 0,
[2025-11-22 22:52:27]     "pilotErrorDiag": "",
[2025-11-22 22:52:27]  *** Listing of results directory ***
[2025-11-22 22:52:27] total 1352272
[2025-11-22 22:52:27] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 05:57 queuedata.json
[2025-11-22 22:52:27] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 05:57 pilot3.tar.gz
[2025-11-22 22:52:27] -rwx------. 1 boincer umatlas     36292 Nov 20 05:59 runpilot2-wrapper.sh
[2025-11-22 22:52:27] -rw-r--r--. 1 boincer umatlas       100 Nov 21 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 22:52:27] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 00:00 run_atlas
[2025-11-22 22:52:27] -rw-r--r--. 1 boincer umatlas       105 Nov 21 00:00 job.xml
[2025-11-22 22:52:27] -rw-r--r--. 2 boincer umatlas 411160206 Nov 21 00:00 EVNT.47493127._000296.pool.root.1
[2025-11-22 22:52:27] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:00 start_atlas.sh
[2025-11-22 22:52:27] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 00:00 shared
[2025-11-22 22:52:27] -rw-r--r--. 2 boincer umatlas    590102 Nov 21 00:00 input.tar.gz
[2025-11-22 22:52:27] -rw-r--r--. 1 boincer umatlas         0 Nov 21 00:00 boinc_lockfile
[2025-11-22 22:52:27] -rw-r--r--. 1 boincer umatlas      2785 Nov 21 00:00 pandaJob.out
[2025-11-22 22:52:27] -rw-------. 1 boincer umatlas        57 Nov 21 00:00 setup.sh.local
[2025-11-22 22:52:27] -rw-------. 1 boincer umatlas    989817 Nov 21 00:02 agis_schedconf.cvmfs.json
[2025-11-22 22:52:27] drwx------. 5 boincer umatlas      4096 Nov 21 00:02 pilot3
[2025-11-22 22:52:27] -rw-r--r--. 1 boincer umatlas       533 Nov 22 22:05 boinc_task_state.xml
[2025-11-22 22:52:27] -rw-r--r--. 1 boincer umatlas      6660 Nov 22 22:46 init_data.xml
[2025-11-22 22:52:27] -rw-------. 1 boincer umatlas 925097512 Nov 22 22:49 HITS.47523449._002955.pool.root.1
[2025-11-22 22:52:27] -rw-------. 1 boincer umatlas      1065 Nov 22 22:50 memory_monitor_summary.json
[2025-11-22 22:52:27] -rw-------. 1 boincer umatlas   1526164 Nov 22 22:51 agis_ddmendpoints.agis.ALL.json
[2025-11-22 22:52:27] -rw-------. 1 boincer umatlas   3372706 Nov 22 22:51 log.47523449._002955.job.log.tgz.1
[2025-11-22 22:52:27] -rw-------. 1 boincer umatlas        95 Nov 22 22:51 pilot_heartbeat.json
[2025-11-22 22:52:27] -rw-------. 1 boincer umatlas      8632 Nov 22 22:51 heartbeat.json
[2025-11-22 22:52:27] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 22:52 boinc_mmap_file
[2025-11-22 22:52:27] -rw-------. 1 boincer umatlas       823 Nov 22 22:52 pilotlog.txt
[2025-11-22 22:52:27] -rw-r--r--. 1 boincer umatlas        29 Nov 22 22:52 wrapper_checkpoint.txt
[2025-11-22 22:52:27] -rw-------. 1 boincer umatlas  18900255 Nov 22 22:52 log.47523449._002955.job.log.1
[2025-11-22 22:52:27] -rw-------. 1 boincer umatlas       353 Nov 22 22:52 output.list
[2025-11-22 22:52:27] -rw-r--r--. 1 boincer umatlas       620 Nov 22 22:52 runtime_log
[2025-11-22 22:52:27] -rw-------. 1 boincer umatlas  22292480 Nov 22 22:52 result.tar.gz
[2025-11-22 22:52:27] -rw-r--r--. 1 boincer umatlas      9334 Nov 22 22:52 runtime_log.err
[2025-11-22 22:52:27] -rw-------. 1 boincer umatlas       663 Nov 22 22:52 Nt1MDmdYHg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmEUGKDmi7JC5m.diag
[2025-11-22 22:52:27] -rw-r--r--. 1 boincer umatlas     21828 Nov 22 22:52 stderr.txt
[2025-11-22 22:52:27] HITS file was successfully produced:
[2025-11-22 22:52:27] -rw-------. 1 boincer umatlas 925097512 Nov 22 22:49 shared/HITS.pool.root.1
[2025-11-22 22:52:27]  *** Contents of shared directory: ***
[2025-11-22 22:52:27] total 1327316
[2025-11-22 22:52:27] -rw-r--r--. 2 boincer umatlas 411160206 Nov 21 00:00 ATLAS.root_0
[2025-11-22 22:52:27] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:00 start_atlas.sh
[2025-11-22 22:52:27] -rw-r--r--. 2 boincer umatlas    590102 Nov 21 00:00 input.tar.gz
[2025-11-22 22:52:27] -rw-------. 1 boincer umatlas 925097512 Nov 22 22:49 HITS.pool.root.1
[2025-11-22 22:52:27] -rw-------. 1 boincer umatlas  22292480 Nov 22 22:52 result.tar.gz
22:52:29 (3470775): run_atlas exited; CPU time 307708.637295
22:52:29 (3470775): called boinc_finish(0)

</stderr_txt>
]]>

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