Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:57:36 (1129998): wrapper (7.7.26015): starting
07:57:36 (1129998): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 07:57:36] Arguments: --nthreads 8
[2025-11-20 07:57:36] Threads: 8
[2025-11-20 07:57:36] Checking for CVMFS
[2025-11-20 07:57:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 07:57:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 07:57:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 07:57:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 07:57:39] 2.11.3.0 3082052 19954 223536 153086 2 299 39175592 45568000 10021 130560 0 145101630 99.817 79804168 21200 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-20 07:57:39] CVMFS is ok
[2025-11-20 07:57:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 07:57:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 07:57:39] Further information can be found at the LHC@home message board.
[2025-11-20 07:57:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 07:57:39] Checking for apptainer binary...
[2025-11-20 07:57:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 07:57:39] Running /usr/bin/apptainer --version
[2025-11-20 07:57:39] apptainer version 1.4.1-1.el9
[2025-11-20 07:57:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 07:57:40] wns0019.triumf.lcg
[2025-11-20 07:57:40] apptainer works
[2025-11-20 07:57:41] Set ATHENA_PROC_NUMBER=8
[2025-11-20 07:57:41] Set ATHENA_CORE_NUMBER=8
[2025-11-20 07:57:41] Starting ATLAS job with PandaID=6893857894
[2025-11-20 07:57:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 08:03:42]  *** The last 200 lines of the pilot log: ***
[2025-11-20 08:03:42] 2025-11-20 16:03:09,844 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-20 08:03:42] 2025-11-20 16:03:09,845 | WARNING  | wrong length of table data, x=[1763654367.0, 1763654428.0], y=[1997.0, 371686.0] (must be same and length>=4)
[2025-11-20 08:03:42] 2025-11-20 16:03:09,845 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | ..............................
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | . Timing measurements:
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | . get job = 0 s
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | . initial setup = 3 s
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | . payload setup = 18 s
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | . stage-in = 0 s
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | . payload execution = 115 s
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | . stage-out = 0 s
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | . log creation = 0 s
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | ..............................
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 08:03:42] 2025-11-20 16:03:09,847 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893857894/pilotlog.txt
[2025-11-20 08:03:42] 2025-11-20 16:03:09,867 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-20 08:03:42] - Log from pilotlog.txt -
[2025-11-20 08:03:42] 2025-11-20 16:03:09,843 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6893857894/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 08:03:42] 2025-11-20 16:03:09,844 | INFO     | extracted standard info from prmon json
[2025-11-20 08:03:42] 2025-11-20 16:03:09,844 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 08:03:42] 2025-11-20 16:03:09,844 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 08:03:42] 2025-11-20 16:03:09,844 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-20 08:03:42] 2025-11-20 16:03:09,844 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-20 08:03:42] 2025-11-20 16:03:09,845 | WARNING  | wrong length of table data, x=[1763654367.0, 1763654428.0], y=[1997.0, 371686.0] (must be same and length>=4)
[2025-11-20 08:03:42] 2025-11-20 16:03:09,845 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | ..............................
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | . Timing measurements:
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | . get job = 0 s
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | . initial setup = 3 s
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | . payload setup = 18 s
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | . stage-in = 0 s
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | . payload execution = 115 s
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | . stage-out = 0 s
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | . log creation = 0 s
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | ..............................
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 08:03:42] 2025-11-20 16:03:09,847 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893857894/pilotlog.txt
[2025-11-20 08:03:42] 2025-11-20 16:03:09,867 | WARNING  | 
[2025-11-20 08:03:42] [begin log extracts]
[2025-11-20 08:03:42] - Log from pilotlog.txt -
[2025-11-20 08:03:42] 2025-11-20 16:03:09,843 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6893857894/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 08:03:42] 2025-11-20 16:03:09,844 | INFO     | extracted standard info from prmon json
[2025-11-20 08:03:42] 2025-11-20 16:03:09,844 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 08:03:42] 2025-11-20 16:03:09,844 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 08:03:42] 2025-11-20 16:03:09,844 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-20 08:03:42] 2025-11-20 16:03:09,844 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-20 08:03:42] 2025-11-20 16:03:09,845 | WARNING  | wrong length of table data, x=[1763654367.0, 1763654428.0], y=[1997.0, 371686.0] (must be same and length>=4)
[2025-11-20 08:03:42] 2025-11-20 16:03:09,845 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | ..............................
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | . Timing measurements:
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | . get job = 0 s
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | . initial setup = 3 s
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | . payload setup = 18 s
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | . stage-in = 0 s
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | . payload execution = 115 s
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | . stage-out = 0 s
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | . log creation = 0 s
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | ..............................
[2025-11-20 08:03:42] 2025-11-20 16:03:09,846 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 08:03:42] 2025-11-20 16:03:09,847 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893857894/pilotlog.txt
[2025-11-20 08:03:42] [end log extracts]
[2025-11-20 08:03:42] 2025-11-20 16:03:09,867 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-20 08:03:42] 2025-11-20 16:03:09,868 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-20 08:03:42] 2025-11-20 16:03:09,936 | INFO     | 
[2025-11-20 08:03:42] 2025-11-20 16:03:09,936 | INFO     | job summary report
[2025-11-20 08:03:42] 2025-11-20 16:03:09,936 | INFO     | --------------------------------------------------
[2025-11-20 08:03:42] 2025-11-20 16:03:09,936 | INFO     | PanDA job id: 6893857894
[2025-11-20 08:03:42] 2025-11-20 16:03:09,936 | INFO     | task id: 47523449
[2025-11-20 08:03:42] 2025-11-20 16:03:09,936 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-20 08:00:50,392 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-20 08:03:42] 2025-11-20 16:03:09,936 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-20 08:03:42] 2025-11-20 16:03:09,936 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 08:03:42] 2025-11-20 16:03:09,936 | INFO     | pilot state: failed 
[2025-11-20 08:03:42] 2025-11-20 16:03:09,936 | INFO     | transexitcode: 65
[2025-11-20 08:03:42] 2025-11-20 16:03:09,937 | INFO     | exeerrorcode: 65
[2025-11-20 08:03:42] 2025-11-20 16:03:09,937 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-20 08:03:42] 2025-11-20 16:03:09,937 | INFO     | exitcode: 65
[2025-11-20 08:03:42] 2025-11-20 16:03:09,937 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-20 08:03:42] 2025-11-20 16:03:09,937 | INFO     | cpuconsumptiontime: 48 s
[2025-11-20 08:03:42] 2025-11-20 16:03:09,937 | INFO     | nevents: 0
[2025-11-20 08:03:42] 2025-11-20 16:03:09,937 | INFO     | neventsw: 0
[2025-11-20 08:03:42] 2025-11-20 16:03:09,937 | INFO     | pid: 1147582
[2025-11-20 08:03:42] 2025-11-20 16:03:09,937 | INFO     | pgrp: 1147582
[2025-11-20 08:03:42] 2025-11-20 16:03:09,937 | INFO     | corecount: 8
[2025-11-20 08:03:42] 2025-11-20 16:03:09,937 | INFO     | event service: False
[2025-11-20 08:03:42] 2025-11-20 16:03:09,937 | INFO     | sizes: {0: 2297979, 1: 2298661, 2: 2298689, 11: 2299122, 13: 2299150, 138: 2324698, 140: 2329016, 270: 2329182}
[2025-11-20 08:03:42] 2025-11-20 16:03:09,937 | INFO     | --------------------------------------------------
[2025-11-20 08:03:42] 2025-11-20 16:03:09,937 | INFO     | 
[2025-11-20 08:03:42] 2025-11-20 16:03:09,938 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-20 08:03:42] 2025-11-20 16:03:09,952 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 08:03:42] 2025-11-20 16:03:09,953 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 08:03:42] 2025-11-20 16:03:09,953 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 08:03:42] 2025-11-20 16:03:09,953 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 08:03:42] 2025-11-20 16:03:09,953 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 08:03:42] 2025-11-20 16:03:09,953 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 08:03:42] 2025-11-20 16:03:09,953 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 08:03:42] 2025-11-20 16:03:09,953 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 08:03:42] 2025-11-20 16:03:09,953 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 08:03:42] 2025-11-20 16:03:09,953 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 08:03:42] 2025-11-20 16:03:09,953 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 08:03:42] 2025-11-20 16:03:09,953 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 08:03:42] 2025-11-20 16:03:09,953 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 08:03:42] 2025-11-20 16:03:09,954 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 08:03:42] 2025-11-20 16:03:09,954 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 08:03:42] 2025-11-20 16:03:09,954 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 08:03:42] 2025-11-20 16:03:09,954 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 08:03:42] 2025-11-20 16:03:09,954 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 08:03:42] 2025-11-20 16:03:09,954 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 08:03:42] 2025-11-20 16:03:09,954 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 08:03:42] 2025-11-20 16:03:09,954 | INFO     | job 6893857894 has completed (purged errors)
[2025-11-20 08:03:42] 2025-11-20 16:03:09,954 | INFO     | overall cleanup function is called
[2025-11-20 08:03:42] 2025-11-20 16:03:10,962 | INFO     | --- collectZombieJob: --- 10, [1147582]
[2025-11-20 08:03:42] 2025-11-20 16:03:10,962 | INFO     | zombie collector waiting for pid 1147582
[2025-11-20 08:03:42] 2025-11-20 16:03:10,963 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 08:03:42] 2025-11-20 16:03:10,963 | INFO     | collected zombie processes
[2025-11-20 08:03:42] 2025-11-20 16:03:10,963 | INFO     | will attempt to kill all subprocesses of pid=1147582
[2025-11-20 08:03:42] 2025-11-20 16:03:11,217 | INFO     | process IDs to be killed: [1147582] (in reverse order)
[2025-11-20 08:03:42] 2025-11-20 16:03:11,302 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 08:03:42] 2025-11-20 16:03:11,302 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 08:03:42] 2025-11-20 16:03:11,310 | INFO     | did not find any defunct processes belonging to 1147582
[2025-11-20 08:03:42] 2025-11-20 16:03:11,346 | INFO     | did not find any defunct processes belonging to 1147582
[2025-11-20 08:03:42] 2025-11-20 16:03:11,346 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 08:03:42] 2025-11-20 16:03:11,347 | INFO     | ready for new job
[2025-11-20 08:03:42] 2025-11-20 16:03:11,347 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 08:03:42] 2025-11-20 16:03:11,348 | INFO     | ***************************************
[2025-11-20 08:03:42] 2025-11-20 16:03:11,348 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 08:03:42] 2025-11-20 16:03:11,348 | INFO     | ***************************************
[2025-11-20 08:03:42] 2025-11-20 16:03:11,348 | INFO     | 
[2025-11-20 08:03:42] 2025-11-20 16:03:11,350 | INFO     | architecture information:
[2025-11-20 08:03:42] 2025-11-20 16:03:11,350 | INFO     | executing command: cat /etc/os-release
[2025-11-20 08:03:42] 2025-11-20 16:03:11,369 | INFO     | cat /etc/os-release:
[2025-11-20 08:03:42] NAME="CentOS Linux"
[2025-11-20 08:03:42] VERSION="7 (Core)"
[2025-11-20 08:03:42] ID="centos"
[2025-11-20 08:03:42] ID_LIKE="rhel fedora"
[2025-11-20 08:03:42] VERSION_ID="7"
[2025-11-20 08:03:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 08:03:42] ANSI_COLOR="0;31"
[2025-11-20 08:03:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 08:03:42] HOME_URL="https://www.centos.org/"
[2025-11-20 08:03:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 08:03:42] 
[2025-11-20 08:03:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 08:03:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 08:03:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 08:03:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 08:03:42] 
[2025-11-20 08:03:42] 2025-11-20 16:03:11,369 | INFO     | ***************************************
[2025-11-20 08:03:42] 2025-11-20 16:03:11,877 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-20 08:03:42] 2025-11-20 16:03:11,915 | INFO     | sufficient remaining disk space (1355701813248 B)
[2025-11-20 08:03:42] 2025-11-20 16:03:11,915 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 08:03:42] 2025-11-20 16:03:11,915 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 08:03:42] 2025-11-20 16:03:11,915 | INFO     | update_server=False
[2025-11-20 08:03:42] 2025-11-20 16:03:11,915 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 08:03:42] 2025-11-20 16:03:11,917 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 08:03:42] 2025-11-20 16:03:11,931 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 08:03:42] 2025-11-20 16:03:12,157 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 08:03:42] 2025-11-20 16:03:12,157 | INFO     | aborting loop
[2025-11-20 08:03:42] 2025-11-20 16:03:12,281 | INFO     | all job control threads have been joined
[2025-11-20 08:03:42] 2025-11-20 16:03:12,813 | INFO     | all data control threads have been joined
[2025-11-20 08:03:42] 2025-11-20 16:03:12,921 | INFO     | [job] retrieve thread has finished
[2025-11-20 08:03:42] 2025-11-20 16:03:12,923 | INFO     | [job] queue monitor thread has finished
[2025-11-20 08:03:42] 2025-11-20 16:03:12,950 | INFO     | all payload control threads have been joined
[2025-11-20 08:03:42] 2025-11-20 16:03:13,032 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 08:03:42] 2025-11-20 16:03:13,071 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 08:03:42] 2025-11-20 16:03:13,173 | INFO     | [job] job monitor thread has finished
[2025-11-20 08:03:42] 2025-11-20 16:03:13,236 | INFO     | [payload] failed_post thread has finished
[2025-11-20 08:03:42] 2025-11-20 16:03:13,286 | INFO     | [data] copytool_in thread has finished
[2025-11-20 08:03:42] 2025-11-20 16:03:13,292 | INFO     | [job] control thread has finished
[2025-11-20 08:03:42] 2025-11-20 16:03:13,694 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 08:03:42] 2025-11-20 16:03:13,714 | INFO     | [payload] validate_post thread has finished
[2025-11-20 08:03:42] 2025-11-20 16:03:13,818 | INFO     | [data] control thread has finished
[2025-11-20 08:03:42] 2025-11-20 16:03:13,863 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 08:03:42] 2025-11-20 16:03:13,879 | INFO     | [job] validate thread has finished
[2025-11-20 08:03:42] 2025-11-20 16:03:13,937 | INFO     | [data] copytool_out thread has finished
[2025-11-20 08:03:42] 2025-11-20 16:03:13,955 | INFO     | [payload] control thread has finished
[2025-11-20 08:03:42] 2025-11-20 16:03:14,381 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 08:03:42] 2025-11-20 16:03:15,121 | INFO     | [monitor] cgroup control has ended
[2025-11-20 08:03:42] 2025-11-20 16:03:17,051 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 08:03:42] 2025-11-20 16:03:19,048 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140143832979264)>', '<ExcThread(monitor, started 140142702491392)>']
[2025-11-20 08:03:42] 2025-11-20 16:03:24,074 | INFO     | all workflow threads have been joined
[2025-11-20 08:03:42] 2025-11-20 16:03:24,074 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 08:03:42] 2025-11-20 16:03:24,075 | INFO     | traces error code: 0
[2025-11-20 08:03:42] 2025-11-20 16:03:24,075 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 08:03:42] 2025-11-20 16:03:42,087 | INFO     | PID=1133738 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-20 08:03:42] 2025-11-20 16:03:42,087 | INFO     | .. there are 19 such processes running
[2025-11-20 08:03:42] 2025-11-20 16:03:42,088 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 08:03:42] 2025-11-20 16:03:42,088 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 08:03:42] 2025-11-20 16:03:42,088 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 08:03:42] 2025-11-20 16:03:42,088 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 08:03:42] 2025-11-20 16:03:42,088 | INFO     | [monitor] control thread has ended
[2025-11-20 08:03:42] 2025-11-20 16:03:42,375 [wrapper] ==== pilot stdout END ====
[2025-11-20 08:03:42] 2025-11-20 16:03:42,430 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 08:03:42] 2025-11-20 16:03:42,467 [wrapper] pilotpid: 1133738
[2025-11-20 08:03:42] 2025-11-20 16:03:42,510 [wrapper] Pilot exit status: 0
[2025-11-20 08:03:42] 2025-11-20 16:03:42,593 [wrapper] pandaids: 6893857894
[2025-11-20 08:03:42] 2025-11-20 16:03:42,675 [wrapper] cleanup supervisor_pilot 1133744 1133739
[2025-11-20 08:03:42] 2025-11-20 16:03:42,681 [wrapper] Test setup, not cleaning
[2025-11-20 08:03:42] 2025-11-20 16:03:42,683 [wrapper] apfmon messages muted
[2025-11-20 08:03:42] 2025-11-20 16:03:42,684 [wrapper] ==== wrapper stdout END ====
[2025-11-20 08:03:42] 2025-11-20 16:03:42,687 [wrapper] ==== wrapper stderr END ====
[2025-11-20 08:03:42]  *** Error codes and diagnostics ***
[2025-11-20 08:03:42]     "exeErrorCode": 65,
[2025-11-20 08:03:42]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-20 08:03:42]     "pilotErrorCode": 1305,
[2025-11-20 08:03:42]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-20 08:03:42]  *** Listing of results directory ***
[2025-11-20 08:03:42] total 404576
[2025-11-20 08:03:42] -rw-r--r--. 1 boinc boinc    576529 Nov 20 05:12 pilot3.tar.gz
[2025-11-20 08:03:42] -rwx------. 1 boinc boinc     36292 Nov 20 05:16 runpilot2-wrapper.sh
[2025-11-20 08:03:42] -rw-r--r--. 1 boinc boinc      5112 Nov 20 05:16 queuedata.json
[2025-11-20 08:03:42] -rw-r--r--. 1 boinc boinc       100 Nov 20 07:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 08:03:42] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 07:57 run_atlas
[2025-11-20 08:03:42] -rw-r--r--. 1 boinc boinc       105 Nov 20 07:57 job.xml
[2025-11-20 08:03:42] -rw-r--r--. 1 boinc boinc      6445 Nov 20 07:57 init_data.xml
[2025-11-20 08:03:42] -rw-r--r--. 2 boinc boinc 410063261 Nov 20 07:57 EVNT.47493127._000503.pool.root.1
[2025-11-20 08:03:42] -rw-r--r--. 2 boinc boinc     15847 Nov 20 07:57 start_atlas.sh
[2025-11-20 08:03:42] drwxrwx--x. 2 boinc boinc      4096 Nov 20 07:57 shared
[2025-11-20 08:03:42] -rw-r--r--. 2 boinc boinc    590102 Nov 20 07:57 input.tar.gz
[2025-11-20 08:03:42] -rw-r--r--. 1 boinc boinc         0 Nov 20 07:57 boinc_lockfile
[2025-11-20 08:03:42] -rw-r--r--. 1 boinc boinc      2786 Nov 20 07:57 pandaJob.out
[2025-11-20 08:03:42] -rw-------. 1 boinc boinc    989440 Nov 20 07:58 agis_schedconf.cvmfs.json
[2025-11-20 08:03:42] -rw-------. 1 boinc boinc   1526164 Nov 20 07:58 agis_ddmendpoints.agis.ALL.json
[2025-11-20 08:03:42] drwx------. 5 boinc boinc      4096 Nov 20 07:58 pilot3
[2025-11-20 08:03:42] -rw-r--r--. 1 boinc boinc       525 Nov 20 08:00 boinc_task_state.xml
[2025-11-20 08:03:42] -rw-------. 1 boinc boinc       985 Nov 20 08:00 memory_monitor_summary.json
[2025-11-20 08:03:42] -rw-------. 1 boinc boinc     48981 Nov 20 08:00 log.47523449._005027.job.log.tgz.1
[2025-11-20 08:03:42] -rw-------. 1 boinc boinc     10330 Nov 20 08:03 heartbeat.json
[2025-11-20 08:03:42] -rw-r--r--. 1 boinc boinc      8192 Nov 20 08:03 boinc_mmap_file
[2025-11-20 08:03:42] -rw-r--r--. 1 boinc boinc        23 Nov 20 08:03 wrapper_checkpoint.txt
[2025-11-20 08:03:42] -rw-------. 1 boinc boinc       823 Nov 20 08:03 pilotlog.txt
[2025-11-20 08:03:42] -rw-------. 1 boinc boinc        95 Nov 20 08:03 pilot_heartbeat.json
[2025-11-20 08:03:42] -rw-------. 1 boinc boinc    104302 Nov 20 08:03 log.47523449._005027.job.log.1
[2025-11-20 08:03:42] -rw-------. 1 boinc boinc       186 Nov 20 08:03 output.list
[2025-11-20 08:03:42] -rw-r--r--. 1 boinc boinc       620 Nov 20 08:03 runtime_log
[2025-11-20 08:03:42] -rw-------. 1 boinc boinc    174080 Nov 20 08:03 result.tar.gz
[2025-11-20 08:03:42] -rw-r--r--. 1 boinc boinc      8634 Nov 20 08:03 runtime_log.err
[2025-11-20 08:03:42] -rw-------. 1 boinc boinc       645 Nov 20 08:03 I8nMDmKhJg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVhGKDm0R6fOo.diag
[2025-11-20 08:03:42] -rw-r--r--. 1 boinc boinc     22479 Nov 20 08:03 stderr.txt
[2025-11-20 08:03:42] No HITS result produced
[2025-11-20 08:03:42]  *** Contents of shared directory: ***
[2025-11-20 08:03:42] total 401228
[2025-11-20 08:03:42] -rw-r--r--. 2 boinc boinc 410063261 Nov 20 07:57 ATLAS.root_0
[2025-11-20 08:03:42] -rw-r--r--. 2 boinc boinc     15847 Nov 20 07:57 start_atlas.sh
[2025-11-20 08:03:42] -rw-r--r--. 2 boinc boinc    590102 Nov 20 07:57 input.tar.gz
[2025-11-20 08:03:42] -rw-------. 1 boinc boinc    174080 Nov 20 08:03 result.tar.gz
08:03:44 (1129998): run_atlas exited; CPU time 52.360374
08:03:44 (1129998): called boinc_finish(0)

</stderr_txt>
]]>

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