Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:19:12 (996309): wrapper (7.7.26015): starting
17:19:12 (996309): wrapper: running run_atlas (--nthreads 3)
[2025-11-20 17:19:12] Arguments: --nthreads 3
[2025-11-20 17:19:12] Threads: 3
[2025-11-20 17:19:12] Checking for CVMFS
[2025-11-20 17:19:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 17:19:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 17:19:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 17:19:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 17:19:12] 2.9.2.0 16720 206 64788 153088 2 88 34405571 36864000 0 130560 0 2944099 99.999 9570 10692 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-20 17:19:12] CVMFS is ok
[2025-11-20 17:19:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 17:19:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 17:19:12] Further information can be found at the LHC@home message board.
[2025-11-20 17:19:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 17:19:12] Checking for apptainer binary...
[2025-11-20 17:19:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 17:19:12] Running /usr/bin/apptainer --version
[2025-11-20 17:19:12] apptainer version 1.4.1-1.1
[2025-11-20 17:19:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 17:19:13] thA335
[2025-11-20 17:19:13] apptainer works
[2025-11-20 17:19:13] Set ATHENA_PROC_NUMBER=3
[2025-11-20 17:19:13] Set ATHENA_CORE_NUMBER=3
[2025-11-20 17:19:13] Starting ATLAS job with PandaID=6893848439
[2025-11-20 17:19:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 17:23:31]  *** The last 200 lines of the pilot log: ***
[2025-11-20 17:23:31] VERSION_ID="7"
[2025-11-20 17:23:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 17:23:31] ANSI_COLOR="0;31"
[2025-11-20 17:23:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 17:23:31] HOME_URL="https://www.centos.org/"
[2025-11-20 17:23:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 17:23:31] 
[2025-11-20 17:23:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 17:23:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 17:23:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 17:23:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 17:23:31] 
[2025-11-20 17:23:31] 2025-11-20 16:22:43,001 | INFO     | ***************************************
[2025-11-20 17:23:31] 2025-11-20 16:22:43,505 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-20 17:23:31] 2025-11-20 16:22:43,518 | INFO     | sufficient remaining disk space (827647328256 B)
[2025-11-20 17:23:31] 2025-11-20 16:22:43,518 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 17:23:31] 2025-11-20 16:22:43,518 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 17:23:31] 2025-11-20 16:22:43,518 | INFO     | update_server=False
[2025-11-20 17:23:31] 2025-11-20 16:22:43,519 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 17:23:31] 2025-11-20 16:22:43,519 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 17:23:31] 2025-11-20 16:22:43,519 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 17:23:31] 2025-11-20 16:22:43,519 | INFO     | aborting loop
[2025-11-20 17:23:31] 2025-11-20 16:22:44,395 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 17:23:31] 2025-11-20 16:22:44,461 | INFO     | all job control threads have been joined
[2025-11-20 17:23:31] 2025-11-20 16:22:44,524 | INFO     | [job] retrieve thread has finished
[2025-11-20 17:23:31] 2025-11-20 16:22:44,525 | INFO     | all data control threads have been joined
[2025-11-20 17:23:31] 2025-11-20 16:22:44,526 | INFO     | [job] job monitor thread has finished
[2025-11-20 17:23:31] 2025-11-20 16:22:44,526 | INFO     | [job] queue monitor thread has finished
[2025-11-20 17:23:31] 2025-11-20 16:22:44,551 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 17:23:31] 2025-11-20 16:22:44,582 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 17:23:31] 2025-11-20 16:22:44,795 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 17:23:31] 2025-11-20 16:22:44,990 | INFO     | all payload control threads have been joined
[2025-11-20 17:23:31] 2025-11-20 16:22:45,127 | INFO     | [payload] failed_post thread has finished
[2025-11-20 17:23:31] 2025-11-20 16:22:45,467 | INFO     | [job] control thread has finished
[2025-11-20 17:23:31] 2025-11-20 16:22:45,531 | INFO     | [data] control thread has finished
[2025-11-20 17:23:31] 2025-11-20 16:22:45,783 | INFO     | [data] copytool_in thread has finished
[2025-11-20 17:23:31] 2025-11-20 16:22:45,863 | INFO     | [payload] validate_post thread has finished
[2025-11-20 17:23:31] 2025-11-20 16:22:45,950 | INFO     | [job] validate thread has finished
[2025-11-20 17:23:31] 2025-11-20 16:22:45,996 | INFO     | [payload] control thread has finished
[2025-11-20 17:23:31] 2025-11-20 16:22:46,019 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 17:23:31] 2025-11-20 16:22:46,401 | INFO     | [data] copytool_out thread has finished
[2025-11-20 17:23:31] 2025-11-20 16:22:46,615 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 17:23:31] 2025-11-20 16:22:50,623 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 17:23:31] 2025-11-20 16:23:13,524 | INFO     | PID=1000048 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-20 17:23:31] 2025-11-20 16:23:13,524 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 17:23:31] 2025-11-20 16:23:13,524 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 17:23:31] 2025-11-20 16:23:13,524 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 17:23:31] 2025-11-20 16:23:24,551 | INFO     | [monitor] cgroup control has ended
[2025-11-20 17:23:31] 2025-11-20 16:23:26,470 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140240146544448)>', '<ExcThread(monitor, started 140239624443648)>']
[2025-11-20 17:23:31] 2025-11-20 16:23:26,594 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 17:23:31] 2025-11-20 16:23:26,594 | INFO     | [monitor] control thread has ended
[2025-11-20 17:23:31] 2025-11-20 16:23:31,496 | INFO     | all workflow threads have been joined
[2025-11-20 17:23:31] 2025-11-20 16:23:31,497 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 17:23:31] 2025-11-20 16:23:31,498 | INFO     | traces error code: 0
[2025-11-20 17:23:31] 2025-11-20 16:23:31,498 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 17:23:31] 2025-11-20 16:23:31,546 [wrapper] ==== pilot stdout END ====
[2025-11-20 17:23:31] 2025-11-20 16:23:31,549 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 17:23:31] 2025-11-20 16:23:31,552 [wrapper] pilotpid: 1000048
[2025-11-20 17:23:31] 2025-11-20 16:23:31,555 [wrapper] Pilot exit status: 0
[2025-11-20 17:23:31] 2025-11-20 16:23:31,562 [wrapper] pandaids: 6893848439
[2025-11-20 17:23:31] 2025-11-20 16:23:31,578 [wrapper] cleanup supervisor_pilot 1000054 1000049
[2025-11-20 17:23:31] 2025-11-20 16:23:31,581 [wrapper] Test setup, not cleaning
[2025-11-20 17:23:31] 2025-11-20 16:23:31,583 [wrapper] apfmon messages muted
[2025-11-20 17:23:31] 2025-11-20 16:23:31,586 [wrapper] ==== wrapper stdout END ====
[2025-11-20 17:23:31] 2025-11-20 16:23:31,588 [wrapper] ==== wrapper stderr END ====
[2025-11-20 17:23:31]  *** Error codes and diagnostics ***
[2025-11-20 17:23:31]     "exeErrorCode": 65,
[2025-11-20 17:23:31]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-20 17:23:31]     "pilotErrorCode": 1305,
[2025-11-20 17:23:31]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-20 17:23:31]  *** Listing of results directory ***
[2025-11-20 17:23:31] total 402768
[2025-11-20 17:23:31] -rw-r--r-- 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-20 17:23:31] -rw-r--r-- 1 boinc boinc      5112 Nov 20 11:36 queuedata.json
[2025-11-20 17:23:31] -rwx------ 1 boinc boinc     36292 Nov 20 11:37 runpilot2-wrapper.sh
[2025-11-20 17:23:31] -rw-r--r-- 1 boinc boinc       100 Nov 20 17:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 17:23:31] -rwxr-xr-x 1 boinc boinc      7986 Nov 20 17:19 run_atlas
[2025-11-20 17:23:31] -rw-r--r-- 1 boinc boinc       105 Nov 20 17:19 job.xml
[2025-11-20 17:23:31] -rw-r--r-- 2 boinc boinc 408236258 Nov 20 17:19 EVNT.47493127._000270.pool.root.1
[2025-11-20 17:23:31] -rw-r--r-- 2 boinc boinc    590104 Nov 20 17:19 input.tar.gz
[2025-11-20 17:23:31] -rw-r--r-- 2 boinc boinc     15847 Nov 20 17:19 start_atlas.sh
[2025-11-20 17:23:31] drwxrwx--x 2 boinc boinc      4096 Nov 20 17:19 shared
[2025-11-20 17:23:31] -rw-r--r-- 1 boinc boinc         0 Nov 20 17:19 boinc_setup_complete
[2025-11-20 17:23:31] -rw-r--r-- 1 boinc boinc      6194 Nov 20 17:19 init_data.xml
[2025-11-20 17:23:31] -rw-r--r-- 1 boinc boinc         0 Nov 20 17:19 boinc_lockfile
[2025-11-20 17:23:31] -rw-r--r-- 1 boinc boinc      2786 Nov 20 17:19 pandaJob.out
[2025-11-20 17:23:31] -rw------- 1 boinc boinc    989440 Nov 20 17:19 agis_schedconf.cvmfs.json
[2025-11-20 17:23:31] -rw------- 1 boinc boinc   1526164 Nov 20 17:19 agis_ddmendpoints.agis.ALL.json
[2025-11-20 17:23:31] drwx------ 5 boinc boinc      4096 Nov 20 17:19 pilot3
[2025-11-20 17:23:31] -rw-r--r-- 1 boinc boinc       522 Nov 20 17:20 boinc_task_state.xml
[2025-11-20 17:23:31] -rw------- 1 boinc boinc       957 Nov 20 17:20 memory_monitor_summary.json
[2025-11-20 17:23:31] -rw------- 1 boinc boinc     55816 Nov 20 17:20 log.47523449._002697.job.log.tgz.1
[2025-11-20 17:23:31] -rw------- 1 boinc boinc        95 Nov 20 17:22 pilot_heartbeat.json
[2025-11-20 17:23:31] -rw------- 1 boinc boinc      8394 Nov 20 17:22 heartbeat.json
[2025-11-20 17:23:31] -rw-r--r-- 1 boinc boinc        22 Nov 20 17:23 wrapper_checkpoint.txt
[2025-11-20 17:23:31] -rw-r--r-- 1 boinc boinc      8192 Nov 20 17:23 boinc_mmap_file
[2025-11-20 17:23:31] -rw------- 1 boinc boinc      4752 Nov 20 17:23 pilotlog.txt
[2025-11-20 17:23:31] -rw------- 1 boinc boinc     92483 Nov 20 17:23 log.47523449._002697.job.log.1
[2025-11-20 17:23:31] -rw------- 1 boinc boinc       186 Nov 20 17:23 output.list
[2025-11-20 17:23:31] -rw-r--r-- 1 boinc boinc       620 Nov 20 17:23 runtime_log
[2025-11-20 17:23:31] -rw------- 1 boinc boinc    163840 Nov 20 17:23 result.tar.gz
[2025-11-20 17:23:31] -rw-r--r-- 1 boinc boinc      8744 Nov 20 17:23 runtime_log.err
[2025-11-20 17:23:31] -rw------- 1 boinc boinc       649 Nov 20 17:23 HWKMDmgDHg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNWHKDmlpC5Mn.diag
[2025-11-20 17:23:31] -rw-r--r-- 1 boinc boinc      8916 Nov 20 17:23 stderr.txt
[2025-11-20 17:23:31] No HITS result produced
[2025-11-20 17:23:31]  *** Contents of shared directory: ***
[2025-11-20 17:23:31] total 399432
[2025-11-20 17:23:31] -rw-r--r-- 2 boinc boinc 408236258 Nov 20 17:19 ATLAS.root_0
[2025-11-20 17:23:31] -rw-r--r-- 2 boinc boinc    590104 Nov 20 17:19 input.tar.gz
[2025-11-20 17:23:31] -rw-r--r-- 2 boinc boinc     15847 Nov 20 17:19 start_atlas.sh
[2025-11-20 17:23:31] -rw------- 1 boinc boinc    163840 Nov 20 17:23 result.tar.gz
17:23:33 (996309): run_atlas exited; CPU time 30.567007
17:23:33 (996309): called boinc_finish(0)

</stderr_txt>
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