Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:48:09 (8313): wrapper (7.7.26015): starting
12:48:09 (8313): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 12:48:09] Arguments: --nthreads 8
[2025-11-23 12:48:09] Threads: 8
[2025-11-23 12:48:09] Checking for CVMFS
[2025-11-23 12:48:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 12:48:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 12:48:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 12:48:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 12:48:12] 2.11.2.0 2946 280943 142236 153207 2 128 21283101 25165825 4296 130560 2 133593592 99.890 74780726 3044 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-23 12:48:12] CVMFS is ok
[2025-11-23 12:48:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 12:48:12] Checking for apptainer binary...
[2025-11-23 12:48:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 12:48:12] Running /usr/bin/apptainer --version
[2025-11-23 12:48:12] apptainer version 1.3.2-1.el7
[2025-11-23 12:48:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 12:48:21] cg-vwn485.simple-grid.lan
[2025-11-23 12:48:21] apptainer works
[2025-11-23 12:48:21] Set ATHENA_PROC_NUMBER=8
[2025-11-23 12:48:21] Set ATHENA_CORE_NUMBER=8
[2025-11-23 12:48:21] Starting ATLAS job with PandaID=6893847153
[2025-11-23 12:48:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 10:03:42]  *** The last 200 lines of the pilot log: ***
[2025-11-24 10:03:42] 2025-11-24 09:03:20,987 | INFO     | monitor loop #5127: job 0:6893847153 is in state 'finished'
[2025-11-24 10:03:42] 2025-11-24 09:03:20,987 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 10:03:42] 2025-11-24 09:03:21,826 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 10:03:42] 2025-11-24 09:03:21,827 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2025-11-24 10:03:42] 2025-11-24 09:03:21,830 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6893847153/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 10:03:42] 2025-11-24 09:03:21,830 | INFO     | extracted standard info from prmon json
[2025-11-24 10:03:42] 2025-11-24 09:03:21,831 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 10:03:42] 2025-11-24 09:03:21,831 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 10:03:42] 2025-11-24 09:03:21,855 | INFO     | fitting pss+swap vs Time
[2025-11-24 10:03:42] 2025-11-24 09:03:21,857 | INFO     | sum of square deviations: 596945305038.7875
[2025-11-24 10:03:42] 2025-11-24 09:03:21,902 | INFO     | sum of deviations: 3005414719513.765
[2025-11-24 10:03:42] 2025-11-24 09:03:21,902 | INFO     | mean x: 1763937059.7307074
[2025-11-24 10:03:42] 2025-11-24 09:03:21,903 | INFO     | mean y: 2849150.8649517684
[2025-11-24 10:03:42] 2025-11-24 09:03:21,903 | INFO     | intersect: -8877968503.38569
[2025-11-24 10:03:42] 2025-11-24 09:03:21,904 | INFO     | chi2: 9.546139909440617
[2025-11-24 10:03:42] 2025-11-24 09:03:21,906 | INFO     | sum of square deviations: 589776688731.1857
[2025-11-24 10:03:42] 2025-11-24 09:03:21,951 | INFO     | sum of deviations: 3445372227922.291
[2025-11-24 10:03:42] 2025-11-24 09:03:21,951 | INFO     | mean x: 1763936907.235674
[2025-11-24 10:03:42] 2025-11-24 09:03:21,951 | INFO     | mean y: 2858510.255851493
[2025-11-24 10:03:42] 2025-11-24 09:03:21,951 | INFO     | intersect: -10301752282.469048
[2025-11-24 10:03:42] 2025-11-24 09:03:21,953 | INFO     | chi2: 6.056783449921668
[2025-11-24 10:03:42] 2025-11-24 09:03:21,953 | INFO     | current chi2=6.056783449921668 (change=36.552538435647314 %)
[2025-11-24 10:03:42] 2025-11-24 09:03:21,955 | INFO     | sum of square deviations: 582665701411.0209
[2025-11-24 10:03:42] 2025-11-24 09:03:21,999 | INFO     | sum of deviations: 3626498502291.6875
[2025-11-24 10:03:42] 2025-11-24 09:03:21,999 | INFO     | mean x: 1763936754.7406807
[2025-11-24 10:03:42] 2025-11-24 09:03:21,999 | INFO     | mean y: 2862393.3427876825
[2025-11-24 10:03:42] 2025-11-24 09:03:21,999 | INFO     | intersect: -10975841147.492308
[2025-11-24 10:03:42] 2025-11-24 09:03:22,001 | INFO     | chi2: 5.32030950380348
[2025-11-24 10:03:42] 2025-11-24 09:03:22,001 | INFO     | current chi2=5.32030950380348 (change=12.159489475023467 %)
[2025-11-24 10:03:42] 2025-11-24 09:03:22,001 | INFO     | right removable region: 1233
[2025-11-24 10:03:42] 2025-11-24 09:03:22,003 | INFO     | sum of square deviations: 589775754821.1844
[2025-11-24 10:03:42] 2025-11-24 09:03:22,047 | INFO     | sum of deviations: 2529358492406.9097
[2025-11-24 10:03:42] 2025-11-24 09:03:22,047 | INFO     | mean x: 1763937212.235674
[2025-11-24 10:03:42] 2025-11-24 09:03:22,047 | INFO     | mean y: 2859275.445520581
[2025-11-24 10:03:42] 2025-11-24 09:03:22,047 | INFO     | intersect: -7562100001.650575
[2025-11-24 10:03:42] 2025-11-24 09:03:22,049 | INFO     | chi2: 5.690937571816253
[2025-11-24 10:03:42] 2025-11-24 09:03:22,049 | INFO     | current chi2=5.690937571816253 (change=40.38493437344007 %)
[2025-11-24 10:03:42] 2025-11-24 09:03:22,051 | INFO     | sum of square deviations: 582664059842.4548
[2025-11-24 10:03:42] 2025-11-24 09:03:22,095 | INFO     | sum of deviations: 2296734882199.655
[2025-11-24 10:03:42] 2025-11-24 09:03:22,095 | INFO     | mean x: 1763937364.7382495
[2025-11-24 10:03:42] 2025-11-24 09:03:22,095 | INFO     | mean y: 2864259.045380875
[2025-11-24 10:03:42] 2025-11-24 09:03:22,095 | INFO     | intersect: -6950192836.50483
[2025-11-24 10:03:42] 2025-11-24 09:03:22,097 | INFO     | chi2: 4.728857874399671
[2025-11-24 10:03:42] 2025-11-24 09:03:22,097 | INFO     | current chi2=4.728857874399671 (change=16.905469182814027 %)
[2025-11-24 10:03:42] 2025-11-24 09:03:22,097 | INFO     | left removable region: 20
[2025-11-24 10:03:42] 2025-11-24 09:03:22,099 | INFO     | sum of square deviations: 553420925997.812
[2025-11-24 10:03:42] 2025-11-24 09:03:22,140 | INFO     | sum of deviations: 2760564069028.582
[2025-11-24 10:03:42] 2025-11-24 09:03:22,140 | INFO     | mean x: 1763937334.2506182
[2025-11-24 10:03:42] 2025-11-24 09:03:22,141 | INFO     | mean y: 2882172.5605935697
[2025-11-24 10:03:42] 2025-11-24 09:03:22,141 | INFO     | intersect: -8795957546.35811
[2025-11-24 10:03:42] 2025-11-24 09:03:22,142 | INFO     | chi2: 0.272956775263014
[2025-11-24 10:03:42] 2025-11-24 09:03:22,142 | INFO     | current memory leak: 4.99 B/s (using 1213 data points, chi2=0.27)
[2025-11-24 10:03:42] 2025-11-24 09:03:22,143 | INFO     | could have reported an average CPU frequency of 2249 MHz (42 samples)
[2025-11-24 10:03:42] 2025-11-24 09:03:22,143 | INFO     | ..............................
[2025-11-24 10:03:42] 2025-11-24 09:03:22,144 | INFO     | . Timing measurements:
[2025-11-24 10:03:42] 2025-11-24 09:03:22,144 | INFO     | . get job = 0 s
[2025-11-24 10:03:42] 2025-11-24 09:03:22,144 | INFO     | . initial setup = 7 s
[2025-11-24 10:03:42] 2025-11-24 09:03:22,144 | INFO     | . payload setup = 165 s
[2025-11-24 10:03:42] 2025-11-24 09:03:22,144 | INFO     | . stage-in = 0 s
[2025-11-24 10:03:42] 2025-11-24 09:03:22,144 | INFO     | . payload execution = 75971 s
[2025-11-24 10:03:42] 2025-11-24 09:03:22,144 | INFO     | . stage-out = 5 s
[2025-11-24 10:03:42] 2025-11-24 09:03:22,144 | INFO     | . log creation = 0 s
[2025-11-24 10:03:42] 2025-11-24 09:03:22,144 | INFO     | ..............................
[2025-11-24 10:03:42] 2025-11-24 09:03:22,201 | INFO     | time since job start (76317s) is within the limit (172800.0s)
[2025-11-24 10:03:42] 2025-11-24 09:03:22,389 | INFO     | 
[2025-11-24 10:03:42] 2025-11-24 09:03:22,389 | INFO     | job summary report
[2025-11-24 10:03:42] 2025-11-24 09:03:22,389 | INFO     | --------------------------------------------------
[2025-11-24 10:03:42] 2025-11-24 09:03:22,389 | INFO     | PanDA job id: 6893847153
[2025-11-24 10:03:42] 2025-11-24 09:03:22,390 | INFO     | task id: 47523449
[2025-11-24 10:03:42] 2025-11-24 09:03:22,390 | INFO     | errors: (none)
[2025-11-24 10:03:42] 2025-11-24 09:03:22,390 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 10:03:42] 2025-11-24 09:03:22,390 | INFO     | pilot state: finished 
[2025-11-24 10:03:42] 2025-11-24 09:03:22,390 | INFO     | transexitcode: 0
[2025-11-24 10:03:42] 2025-11-24 09:03:22,390 | INFO     | exeerrorcode: 0
[2025-11-24 10:03:42] 2025-11-24 09:03:22,391 | INFO     | exeerrordiag: 
[2025-11-24 10:03:42] 2025-11-24 09:03:22,391 | INFO     | exitcode: 0
[2025-11-24 10:03:42] 2025-11-24 09:03:22,391 | INFO     | exitmsg: OK
[2025-11-24 10:03:42] 2025-11-24 09:03:22,391 | INFO     | cpuconsumptiontime: 303633 s
[2025-11-24 10:03:42] 2025-11-24 09:03:22,391 | INFO     | nevents: 1000
[2025-11-24 10:03:42] 2025-11-24 09:03:22,391 | INFO     | neventsw: 0
[2025-11-24 10:03:42] 2025-11-24 09:03:22,391 | INFO     | pid: 19195
[2025-11-24 10:03:42] 2025-11-24 09:03:22,391 | INFO     | pgrp: 19195
[2025-11-24 10:03:42] 2025-11-24 09:03:22,392 | INFO     | corecount: 8
[2025-11-24 10:03:42] 2025-11-24 09:03:22,392 | INFO     | event service: False
[2025-11-24 10:03:42] 2025-11-24 09:03:22,392 | INFO     | sizes: {0: 2298581, 1: 2298836, 2: 2298836, 12: 2298864, 23: 2298892, 34: 2298920, 45: 2299076, 55: 2299104, 60: 2299394, 66: 2299422, 76140: 2356627, 76146: 23656
[2025-11-24 10:03:42] 2025-11-24 09:03:22,392 | INFO     | --------------------------------------------------
[2025-11-24 10:03:42] 2025-11-24 09:03:22,392 | INFO     | 
[2025-11-24 10:03:42] 2025-11-24 09:03:22,392 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-11-24 10:03:42] 2025-11-24 09:03:22,497 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 10:03:42] 2025-11-24 09:03:22,497 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 10:03:42] 2025-11-24 09:03:22,498 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 10:03:42] 2025-11-24 09:03:22,498 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 10:03:42] 2025-11-24 09:03:22,498 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 10:03:42] 2025-11-24 09:03:22,498 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 10:03:42] 2025-11-24 09:03:22,498 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 10:03:42] 2025-11-24 09:03:22,498 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 10:03:42] 2025-11-24 09:03:22,498 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 10:03:42] 2025-11-24 09:03:22,498 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 10:03:42] 2025-11-24 09:03:22,498 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 10:03:42] 2025-11-24 09:03:22,499 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 10:03:42] 2025-11-24 09:03:22,499 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 10:03:42] 2025-11-24 09:03:22,499 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 10:03:42] 2025-11-24 09:03:22,499 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 10:03:42] 2025-11-24 09:03:22,499 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 10:03:42] 2025-11-24 09:03:22,499 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 10:03:42] 2025-11-24 09:03:22,499 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 10:03:42] 2025-11-24 09:03:22,499 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 10:03:42] 2025-11-24 09:03:22,500 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 10:03:42] 2025-11-24 09:03:22,500 | INFO     | job 6893847153 has completed (purged errors)
[2025-11-24 10:03:42] 2025-11-24 09:03:22,500 | INFO     | overall cleanup function is called
[2025-11-24 10:03:42] 2025-11-24 09:03:23,517 | INFO     | --- collectZombieJob: --- 10, [19195]
[2025-11-24 10:03:42] 2025-11-24 09:03:23,517 | INFO     | zombie collector waiting for pid 19195
[2025-11-24 10:03:42] 2025-11-24 09:03:23,518 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 10:03:42] 2025-11-24 09:03:23,518 | INFO     | collected zombie processes
[2025-11-24 10:03:42] 2025-11-24 09:03:23,518 | INFO     | will attempt to kill all subprocesses of pid=19195
[2025-11-24 10:03:42] 2025-11-24 09:03:23,591 | INFO     | process IDs to be killed: [19195] (in reverse order)
[2025-11-24 10:03:42] 2025-11-24 09:03:23,643 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 10:03:42] 2025-11-24 09:03:23,644 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 10:03:42] 2025-11-24 09:03:23,646 | INFO     | did not find any defunct processes belonging to 19195
[2025-11-24 10:03:42] 2025-11-24 09:03:23,647 | INFO     | did not find any defunct processes belonging to 19195
[2025-11-24 10:03:42] 2025-11-24 09:03:23,651 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 10:03:42] 2025-11-24 09:03:23,652 | INFO     | ready for new job
[2025-11-24 10:03:42] 2025-11-24 09:03:23,652 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 10:03:42] 2025-11-24 09:03:23,657 | INFO     | ***************************************
[2025-11-24 10:03:42] 2025-11-24 09:03:23,657 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 10:03:42] 2025-11-24 09:03:23,657 | INFO     | ***************************************
[2025-11-24 10:03:42] 2025-11-24 09:03:23,657 | INFO     | 
[2025-11-24 10:03:42] 2025-11-24 09:03:23,658 | INFO     | pilot is running in a VM
[2025-11-24 10:03:42] 2025-11-24 09:03:23,658 | INFO     | architecture information:
[2025-11-24 10:03:42] 2025-11-24 09:03:23,659 | INFO     | executing command: cat /etc/os-release
[2025-11-24 10:03:42] 2025-11-24 09:03:23,678 | INFO     | cat /etc/os-release:
[2025-11-24 10:03:42] NAME="CentOS Linux"
[2025-11-24 10:03:42] VERSION="7 (Core)"
[2025-11-24 10:03:42] ID="centos"
[2025-11-24 10:03:42] ID_LIKE="rhel fedora"
[2025-11-24 10:03:42] VERSION_ID="7"
[2025-11-24 10:03:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 10:03:42] ANSI_COLOR="0;31"
[2025-11-24 10:03:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 10:03:42] HOME_URL="https://www.centos.org/"
[2025-11-24 10:03:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 10:03:42] 
[2025-11-24 10:03:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 10:03:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 10:03:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 10:03:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 10:03:42] 
[2025-11-24 10:03:42] 2025-11-24 09:03:23,678 | INFO     | ***************************************
[2025-11-24 10:03:42] 2025-11-24 09:03:24,182 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-11-24 10:03:42] 2025-11-24 09:03:24,200 | INFO     | sufficient remaining disk space (495877881856 B)
[2025-11-24 10:03:42] 2025-11-24 09:03:24,200 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 10:03:42] 2025-11-24 09:03:24,201 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 10:03:42] 2025-11-24 09:03:24,201 | INFO     | update_server=False
[2025-11-24 10:03:42] 2025-11-24 09:03:24,201 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 10:03:42] 2025-11-24 09:03:24,201 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 10:03:42] 2025-11-24 09:03:24,202 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-24 10:03:42] 2025-11-24 09:03:24,202 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 10:03:42] 2025-11-24 09:03:24,203 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 10:03:42] 2025-11-24 09:03:24,203 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 10:03:42] 2025-11-24 09:03:24,203 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 10:03:42] 2025-11-24 09:03:24,500 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 10:03:42] 2025-11-24 09:03:24,501 | INFO     | aborting loop
[2025-11-24 10:03:42] 2025-11-24 09:03:24,540 | INFO     | all job control threads have been joined
[2025-11-24 10:03:42] 2025-11-24 09:03:24,731 | INFO     | all data control threads have been joined
[2025-11-24 10:03:42] 2025-11-24 09:03:25,133 | INFO     | all payload control threads have been joined
[2025-11-24 10:03:42] 2025-11-24 09:03:25,204 | INFO     | [job] retrieve thread has finished
[2025-11-24 10:03:42] 2025-11-24 09:03:25,207 | INFO     | [job] queue monitor thread has finished
[2025-11-24 10:03:42] 2025-11-24 09:03:25,208 | INFO     | [job] validate thread has finished
[2025-11-24 10:03:42] 2025-11-24 09:03:25,290 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 10:03:42] 2025-11-24 09:03:25,321 | INFO     | [data] copytool_in thread has finished
[2025-11-24 10:03:42] 2025-11-24 09:03:25,341 | INFO     | [payload] validate_post thread has finished
[2025-11-24 10:03:42] 2025-11-24 09:03:25,506 | INFO     | [job] job monitor thread has finished
[2025-11-24 10:03:42] 2025-11-24 09:03:25,546 | INFO     | [job] control thread has finished
[2025-11-24 10:03:42] 2025-11-24 09:03:25,737 | INFO     | [data] control thread has finished
[2025-11-24 10:03:42] 2025-11-24 09:03:25,824 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 10:03:42] 2025-11-24 09:03:26,025 | INFO     | [payload] failed_post thread has finished
[2025-11-24 10:03:42] 2025-11-24 09:03:26,138 | INFO     | [payload] control thread has finished
[2025-11-24 10:03:42] 2025-11-24 09:03:26,182 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 10:03:42] 2025-11-24 09:03:26,210 | INFO     | [data] copytool_out thread has finished
[2025-11-24 10:03:42] 2025-11-24 09:03:26,305 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 10:03:42] 2025-11-24 09:03:26,554 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 10:03:42] 2025-11-24 09:03:30,311 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 10:03:42] 2025-11-24 09:03:36,566 | INFO     | [monitor] cgroup control has ended
[2025-11-24 10:03:42] 2025-11-24 09:03:37,012 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140599693444928)>', '<ExcThread(monitor, started 140599034373888)>']
[2025-11-24 10:03:42] 2025-11-24 09:03:37,270 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 10:03:42] 2025-11-24 09:03:37,270 | INFO     | [monitor] control thread has ended
[2025-11-24 10:03:42] 2025-11-24 09:03:42,038 | INFO     | all workflow threads have been joined
[2025-11-24 10:03:42] 2025-11-24 09:03:42,038 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 10:03:42] 2025-11-24 09:03:42,039 | INFO     | traces error code: 0
[2025-11-24 10:03:42] 2025-11-24 09:03:42,039 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 10:03:42] 2025-11-24 09:03:42,173 [wrapper] ==== pilot stdout END ====
[2025-11-24 10:03:42] 2025-11-24 09:03:42,179 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 10:03:42] 2025-11-24 09:03:42,183 [wrapper] pilotpid: 12481
[2025-11-24 10:03:42] 2025-11-24 09:03:42,187 [wrapper] Pilot exit status: 0
[2025-11-24 10:03:42] 2025-11-24 09:03:42,203 [wrapper] pandaids: 6893847153
[2025-11-24 10:03:42] 2025-11-24 09:03:42,235 [wrapper] cleanup supervisor_pilot 30452 12482
[2025-11-24 10:03:42] 2025-11-24 09:03:42,239 [wrapper] Test setup, not cleaning
[2025-11-24 10:03:42] 2025-11-24 09:03:42,250 [wrapper] apfmon messages muted
[2025-11-24 10:03:42] 2025-11-24 09:03:42,255 [wrapper] ==== wrapper stdout END ====
[2025-11-24 10:03:42] 2025-11-24 09:03:42,259 [wrapper] ==== wrapper stderr END ====
[2025-11-24 10:03:42]  *** Error codes and diagnostics ***
[2025-11-24 10:03:42]     "exeErrorCode": 0,
[2025-11-24 10:03:42]     "exeErrorDiag": "",
[2025-11-24 10:03:42]     "pilotErrorCode": 0,
[2025-11-24 10:03:42]     "pilotErrorDiag": "",
[2025-11-24 10:03:42]  *** Listing of results directory ***
[2025-11-24 10:03:42] total 1318412
[2025-11-24 10:03:42] -rw-r--r--. 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-24 10:03:42] -rwx------. 1 boinc boinc     36292 Nov 20 11:23 runpilot2-wrapper.sh
[2025-11-24 10:03:42] -rw-r--r--. 1 boinc boinc      5112 Nov 20 11:25 queuedata.json
[2025-11-24 10:03:42] -rw-r--r--. 1 boinc boinc       100 Nov 23 12:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 10:03:42] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 12:48 run_atlas
[2025-11-24 10:03:42] -rw-r--r--. 1 boinc boinc       105 Nov 23 12:48 job.xml
[2025-11-24 10:03:42] -rw-r--r--. 2 boinc boinc 411667974 Nov 23 12:48 EVNT.47493127._000233.pool.root.1
[2025-11-24 10:03:42] -rw-r--r--. 1 boinc boinc      6393 Nov 23 12:48 init_data.xml
[2025-11-24 10:03:42] -rw-r--r--. 2 boinc boinc     15847 Nov 23 12:48 start_atlas.sh
[2025-11-24 10:03:42] drwxrwx--x. 2 boinc boinc        68 Nov 23 12:48 shared
[2025-11-24 10:03:42] -rw-r--r--. 2 boinc boinc    590100 Nov 23 12:48 input.tar.gz
[2025-11-24 10:03:42] -rw-r--r--. 1 boinc boinc         0 Nov 23 12:48 boinc_lockfile
[2025-11-24 10:03:42] -rw-r--r--. 1 boinc boinc      2786 Nov 23 12:48 pandaJob.out
[2025-11-24 10:03:42] -rw-------. 1 boinc boinc    989784 Nov 23 12:51 agis_schedconf.cvmfs.json
[2025-11-24 10:03:42] drwx------. 5 boinc boinc      4096 Nov 23 12:51 pilot3
[2025-11-24 10:03:42] -rw-r--r--. 1 boinc boinc       533 Nov 24 09:51 boinc_task_state.xml
[2025-11-24 10:03:42] -rw-------. 1 boinc boinc 909371100 Nov 24 10:02 HITS.47523449._002324.pool.root.1
[2025-11-24 10:03:42] -rw-------. 1 boinc boinc      1033 Nov 24 10:03 memory_monitor_summary.json
[2025-11-24 10:03:42] -rw-------. 1 boinc boinc        95 Nov 24 10:03 pilot_heartbeat.json
[2025-11-24 10:03:42] -rw-------. 1 boinc boinc   1526164 Nov 24 10:03 agis_ddmendpoints.agis.ALL.json
[2025-11-24 10:03:42] -rw-------. 1 boinc boinc   2378278 Nov 24 10:03 log.47523449._002324.job.log.tgz.1
[2025-11-24 10:03:42] -rw-------. 1 boinc boinc      8626 Nov 24 10:03 heartbeat.json
[2025-11-24 10:03:42] -rw-r--r--. 1 boinc boinc      8192 Nov 24 10:03 boinc_mmap_file
[2025-11-24 10:03:42] -rw-r--r--. 1 boinc boinc        29 Nov 24 10:03 wrapper_checkpoint.txt
[2025-11-24 10:03:42] -rw-------. 1 boinc boinc      4616 Nov 24 10:03 pilotlog.txt
[2025-11-24 10:03:42] -rw-------. 1 boinc boinc  10174579 Nov 24 10:03 log.47523449._002324.job.log.1
[2025-11-24 10:03:42] -rw-------. 1 boinc boinc       353 Nov 24 10:03 output.list
[2025-11-24 10:03:42] -rw-r--r--. 1 boinc boinc       620 Nov 24 10:03 runtime_log
[2025-11-24 10:03:42] -rw-------. 1 boinc boinc  12574720 Nov 24 10:03 result.tar.gz
[2025-11-24 10:03:42] -rw-------. 1 boinc boinc       662 Nov 24 10:03 xjdMDmqzGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlRHKDmIT00Xo.diag
[2025-11-24 10:03:42] -rw-r--r--. 1 boinc boinc      8833 Nov 24 10:03 runtime_log.err
[2025-11-24 10:03:42] -rw-r--r--. 1 boinc boinc     20946 Nov 24 10:03 stderr.txt
[2025-11-24 10:03:42] HITS file was successfully produced:
[2025-11-24 10:03:42] -rw-------. 1 boinc boinc 909371100 Nov 24 10:02 shared/HITS.pool.root.1
[2025-11-24 10:03:42]  *** Contents of shared directory: ***
[2025-11-24 10:03:42] total 1302956
[2025-11-24 10:03:42] -rw-r--r--. 2 boinc boinc 411667974 Nov 23 12:48 ATLAS.root_0
[2025-11-24 10:03:42] -rw-r--r--. 2 boinc boinc     15847 Nov 23 12:48 start_atlas.sh
[2025-11-24 10:03:42] -rw-r--r--. 2 boinc boinc    590100 Nov 23 12:48 input.tar.gz
[2025-11-24 10:03:42] -rw-------. 1 boinc boinc 909371100 Nov 24 10:02 HITS.pool.root.1
[2025-11-24 10:03:42] -rw-------. 1 boinc boinc  12574720 Nov 24 10:03 result.tar.gz
10:03:44 (8313): run_atlas exited; CPU time 303883.653025
10:03:44 (8313): called boinc_finish(0)

</stderr_txt>
]]>

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