Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:35:23 (23680): wrapper (7.7.26015): starting
23:35:23 (23680): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 23:35:23] Arguments: --nthreads 8
[2025-11-22 23:35:23] Threads: 8
[2025-11-22 23:35:23] Checking for CVMFS
[2025-11-22 23:35:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 23:35:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 23:35:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 23:35:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 23:35:25] 2.11.2.0 2602 74662 96980 153187 2 85 14091021 25165825 4632 130560 2 21935716 99.875 13413144 2412 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-22 23:35:25] CVMFS is ok
[2025-11-22 23:35:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 23:35:25] Checking for apptainer binary...
[2025-11-22 23:35:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 23:35:25] Running /usr/bin/apptainer --version
[2025-11-22 23:35:26] apptainer version 1.3.2-1.el7
[2025-11-22 23:35:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 23:35:40] cg-vwn253.simple-grid.lan
[2025-11-22 23:35:40] apptainer works
[2025-11-22 23:35:40] Set ATHENA_PROC_NUMBER=8
[2025-11-22 23:35:40] Set ATHENA_CORE_NUMBER=8
[2025-11-22 23:35:41] Starting ATLAS job with PandaID=6893839991
[2025-11-22 23:35:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 01:24:26]  *** The last 200 lines of the pilot log: ***
[2025-11-24 01:24:26] 2025-11-24 00:23:18,425 | INFO     | time since job start (92623s) is within the limit (172800.0s)
[2025-11-24 01:24:26] 2025-11-24 00:23:20,365 | INFO     | monitor loop #6224: job 0:6893839991 is in state 'finished'
[2025-11-24 01:24:26] 2025-11-24 00:23:20,366 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:24:26] 2025-11-24 00:23:20,435 | INFO     | time since job start (92625s) is within the limit (172800.0s)
[2025-11-24 01:24:26] 2025-11-24 00:23:22,441 | INFO     | time since job start (92627s) is within the limit (172800.0s)
[2025-11-24 01:24:26] 2025-11-24 00:23:22,876 | INFO     | monitor loop #6225: job 0:6893839991 is in state 'finished'
[2025-11-24 01:24:26] 2025-11-24 00:23:22,877 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:24:26] 2025-11-24 00:23:23,616 | INFO     | PID=27472 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 01:24:26] 2025-11-24 00:23:23,616 | INFO     | .. there are 9 such processes running
[2025-11-24 01:24:26] 2025-11-24 00:23:24,617 | INFO     | time since job start (92629s) is within the limit (172800.0s)
[2025-11-24 01:24:26] 2025-11-24 00:23:25,388 | INFO     | monitor loop #6226: job 0:6893839991 is in state 'finished'
[2025-11-24 01:24:26] 2025-11-24 00:23:25,389 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:24:26] 2025-11-24 00:23:26,623 | INFO     | time since job start (92631s) is within the limit (172800.0s)
[2025-11-24 01:24:26] 2025-11-24 00:23:27,741 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 01:24:26] 2025-11-24 00:23:27,742 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-24 01:24:26] 2025-11-24 00:23:27,744 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6893839991/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 01:24:26] 2025-11-24 00:23:27,745 | INFO     | extracted standard info from prmon json
[2025-11-24 01:24:26] 2025-11-24 00:23:27,745 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 01:24:26] 2025-11-24 00:23:27,745 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 01:24:26] 2025-11-24 00:23:27,786 | INFO     | fitting pss+swap vs Time
[2025-11-24 01:24:26] 2025-11-24 00:23:27,798 | INFO     | sum of square deviations: 1065487735014.145
[2025-11-24 01:24:26] 2025-11-24 00:23:27,895 | INFO     | sum of deviations: 4523780922258.593
[2025-11-24 01:24:26] 2025-11-24 00:23:27,895 | INFO     | mean x: 1763897692.2710404
[2025-11-24 01:24:26] 2025-11-24 00:23:27,895 | INFO     | mean y: 2848898.6196156396
[2025-11-24 01:24:26] 2025-11-24 00:23:27,895 | INFO     | intersect: -7486197166.2848835
[2025-11-24 01:24:26] 2025-11-24 00:23:27,897 | INFO     | chi2: 21.152199671384107
[2025-11-24 01:24:26] 2025-11-24 00:23:27,900 | INFO     | sum of square deviations: 1054932103466.0399
[2025-11-24 01:24:26] 2025-11-24 00:23:27,911 | INFO     | monitor loop #6227: job 0:6893839991 is in state 'finished'
[2025-11-24 01:24:26] 2025-11-24 00:23:27,912 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:24:26] 2025-11-24 00:23:28,056 | INFO     | sum of deviations: 5030350698228.244
[2025-11-24 01:24:26] 2025-11-24 00:23:28,057 | INFO     | mean x: 1763897539.775266
[2025-11-24 01:24:26] 2025-11-24 00:23:28,057 | INFO     | mean y: 2856216.2699468085
[2025-11-24 01:24:26] 2025-11-24 00:23:28,057 | INFO     | intersect: -8408133639.530975
[2025-11-24 01:24:26] 2025-11-24 00:23:28,059 | INFO     | chi2: 17.94791995218662
[2025-11-24 01:24:26] 2025-11-24 00:23:28,059 | INFO     | current chi2=17.94791995218662 (change=15.148683205427652 %)
[2025-11-24 01:24:26] 2025-11-24 00:23:28,059 | INFO     | right removable region: 1503
[2025-11-24 01:24:26] 2025-11-24 00:23:28,070 | INFO     | sum of square deviations: 1054930933486.0404
[2025-11-24 01:24:26] 2025-11-24 00:23:28,137 | INFO     | sum of deviations: 3876299520296.4526
[2025-11-24 01:24:26] 2025-11-24 00:23:28,137 | INFO     | mean x: 1763897844.775266
[2025-11-24 01:24:26] 2025-11-24 00:23:28,137 | INFO     | mean y: 2858251.942154255
[2025-11-24 01:24:26] 2025-11-24 00:23:28,138 | INFO     | intersect: -6478510482.748369
[2025-11-24 01:24:26] 2025-11-24 00:23:28,140 | INFO     | chi2: 16.18819196454032
[2025-11-24 01:24:26] 2025-11-24 00:23:28,140 | INFO     | current chi2=16.18819196454032 (change=23.46804485568174 %)
[2025-11-24 01:24:26] 2025-11-24 00:23:28,140 | INFO     | left removable region: 10
[2025-11-24 01:24:26] 2025-11-24 00:23:28,142 | INFO     | sum of square deviations: 1031953287548.0183
[2025-11-24 01:24:26] 2025-11-24 00:23:28,208 | INFO     | sum of deviations: 3926131793388.2666
[2025-11-24 01:24:26] 2025-11-24 00:23:28,208 | INFO     | mean x: 1763897814.2846618
[2025-11-24 01:24:26] 2025-11-24 00:23:28,209 | INFO     | mean y: 2875758.077026122
[2025-11-24 01:24:26] 2025-11-24 00:23:28,209 | INFO     | intersect: -6707985452.904715
[2025-11-24 01:24:26] 2025-11-24 00:23:28,211 | INFO     | chi2: 8.299520371502759
[2025-11-24 01:24:26] 2025-11-24 00:23:28,211 | INFO     | current memory leak: 3.80 B/s (using 1493 data points, chi2=8.30)
[2025-11-24 01:24:26] 2025-11-24 00:23:28,213 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-24 01:24:26] 2025-11-24 00:23:28,213 | INFO     | ..............................
[2025-11-24 01:24:26] 2025-11-24 00:23:28,213 | INFO     | . Timing measurements:
[2025-11-24 01:24:26] 2025-11-24 00:23:28,213 | INFO     | . get job = 0 s
[2025-11-24 01:24:26] 2025-11-24 00:23:28,213 | INFO     | . initial setup = 7 s
[2025-11-24 01:24:26] 2025-11-24 00:23:28,213 | INFO     | . payload setup = 156 s
[2025-11-24 01:24:26] 2025-11-24 00:23:28,213 | INFO     | . stage-in = 0 s
[2025-11-24 01:24:26] 2025-11-24 00:23:28,213 | INFO     | . payload execution = 92161 s
[2025-11-24 01:24:26] 2025-11-24 00:23:28,214 | INFO     | . stage-out = 5 s
[2025-11-24 01:24:26] 2025-11-24 00:23:28,214 | INFO     | . log creation = 2 s
[2025-11-24 01:24:26] 2025-11-24 00:23:28,214 | INFO     | ..............................
[2025-11-24 01:24:26] 2025-11-24 00:23:28,630 | INFO     | time since job start (92633s) is within the limit (172800.0s)
[2025-11-24 01:24:26] 2025-11-24 00:23:28,757 | INFO     | 
[2025-11-24 01:24:26] 2025-11-24 00:23:28,758 | INFO     | job summary report
[2025-11-24 01:24:26] 2025-11-24 00:23:28,758 | INFO     | --------------------------------------------------
[2025-11-24 01:24:26] 2025-11-24 00:23:28,758 | INFO     | PanDA job id: 6893839991
[2025-11-24 01:24:26] 2025-11-24 00:23:28,758 | INFO     | task id: 47523449
[2025-11-24 01:24:26] 2025-11-24 00:23:28,758 | INFO     | errors: (none)
[2025-11-24 01:24:26] 2025-11-24 00:23:28,758 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 01:24:26] 2025-11-24 00:23:28,758 | INFO     | pilot state: finished 
[2025-11-24 01:24:26] 2025-11-24 00:23:28,758 | INFO     | transexitcode: 0
[2025-11-24 01:24:26] 2025-11-24 00:23:28,758 | INFO     | exeerrorcode: 0
[2025-11-24 01:24:26] 2025-11-24 00:23:28,759 | INFO     | exeerrordiag: 
[2025-11-24 01:24:26] 2025-11-24 00:23:28,759 | INFO     | exitcode: 0
[2025-11-24 01:24:26] 2025-11-24 00:23:28,759 | INFO     | exitmsg: OK
[2025-11-24 01:24:26] 2025-11-24 00:23:28,759 | INFO     | cpuconsumptiontime: 338349 s
[2025-11-24 01:24:26] 2025-11-24 00:23:28,759 | INFO     | nevents: 1000
[2025-11-24 01:24:26] 2025-11-24 00:23:28,759 | INFO     | neventsw: 0
[2025-11-24 01:24:26] 2025-11-24 00:23:28,759 | INFO     | pid: 1656
[2025-11-24 01:24:26] 2025-11-24 00:23:28,759 | INFO     | pgrp: 1656
[2025-11-24 01:24:26] 2025-11-24 00:23:28,759 | INFO     | corecount: 8
[2025-11-24 01:24:26] 2025-11-24 00:23:28,759 | INFO     | event service: False
[2025-11-24 01:24:26] 2025-11-24 00:23:28,760 | INFO     | sizes: {0: 2298580, 1: 2298835, 2: 2298835, 12: 2298863, 23: 2298891, 34: 2298919, 44: 2299075, 55: 2299103, 66: 2299131, 77: 2299159, 87: 2299215, 98: 2299523, 10
[2025-11-24 01:24:26] 2025-11-24 00:23:28,760 | INFO     | --------------------------------------------------
[2025-11-24 01:24:26] 2025-11-24 00:23:28,760 | INFO     | 
[2025-11-24 01:24:26] 2025-11-24 00:23:28,760 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-24 01:24:26] 2025-11-24 00:23:29,251 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 01:24:26] 2025-11-24 00:23:29,252 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 01:24:26] 2025-11-24 00:23:29,252 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 01:24:26] 2025-11-24 00:23:29,252 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 01:24:26] 2025-11-24 00:23:29,252 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 01:24:26] 2025-11-24 00:23:29,252 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 01:24:26] 2025-11-24 00:23:29,252 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 01:24:26] 2025-11-24 00:23:29,252 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 01:24:26] 2025-11-24 00:23:29,253 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 01:24:26] 2025-11-24 00:23:29,253 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 01:24:26] 2025-11-24 00:23:29,253 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 01:24:26] 2025-11-24 00:23:29,253 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 01:24:26] 2025-11-24 00:23:29,253 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 01:24:26] 2025-11-24 00:23:29,253 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 01:24:26] 2025-11-24 00:23:29,253 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 01:24:26] 2025-11-24 00:23:29,253 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 01:24:26] 2025-11-24 00:23:29,253 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 01:24:26] 2025-11-24 00:23:29,254 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 01:24:26] 2025-11-24 00:23:29,254 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 01:24:26] 2025-11-24 00:23:29,254 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 01:24:26] 2025-11-24 00:23:29,254 | INFO     | job 6893839991 has completed (purged errors)
[2025-11-24 01:24:26] 2025-11-24 00:23:29,254 | INFO     | overall cleanup function is called
[2025-11-24 01:24:26] 2025-11-24 00:23:30,271 | INFO     | --- collectZombieJob: --- 10, [1656]
[2025-11-24 01:24:26] 2025-11-24 00:23:30,272 | INFO     | zombie collector waiting for pid 1656
[2025-11-24 01:24:26] 2025-11-24 00:23:30,272 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 01:24:26] 2025-11-24 00:23:30,272 | INFO     | collected zombie processes
[2025-11-24 01:24:26] 2025-11-24 00:23:30,272 | INFO     | will attempt to kill all subprocesses of pid=1656
[2025-11-24 01:24:26] 2025-11-24 00:23:30,383 | INFO     | process IDs to be killed: [1656] (in reverse order)
[2025-11-24 01:24:26] 2025-11-24 00:23:30,982 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 01:24:26] 2025-11-24 00:23:30,983 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 01:24:26] 2025-11-24 00:23:30,986 | INFO     | did not find any defunct processes belonging to 1656
[2025-11-24 01:24:26] 2025-11-24 00:23:30,990 | INFO     | did not find any defunct processes belonging to 1656
[2025-11-24 01:24:26] 2025-11-24 00:23:31,024 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 01:24:26] 2025-11-24 00:23:31,024 | INFO     | ready for new job
[2025-11-24 01:24:26] 2025-11-24 00:23:31,024 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 01:24:26] 2025-11-24 00:23:31,031 | INFO     | ***************************************
[2025-11-24 01:24:26] 2025-11-24 00:23:31,031 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 01:24:26] 2025-11-24 00:23:31,031 | INFO     | ***************************************
[2025-11-24 01:24:26] 2025-11-24 00:23:31,031 | INFO     | 
[2025-11-24 01:24:26] 2025-11-24 00:23:31,032 | INFO     | pilot is running in a VM
[2025-11-24 01:24:26] 2025-11-24 00:23:31,032 | INFO     | architecture information:
[2025-11-24 01:24:26] 2025-11-24 00:23:31,042 | INFO     | executing command: cat /etc/os-release
[2025-11-24 01:24:26] 2025-11-24 00:23:31,275 | INFO     | cat /etc/os-release:
[2025-11-24 01:24:26] NAME="CentOS Linux"
[2025-11-24 01:24:26] VERSION="7 (Core)"
[2025-11-24 01:24:26] ID="centos"
[2025-11-24 01:24:26] ID_LIKE="rhel fedora"
[2025-11-24 01:24:26] VERSION_ID="7"
[2025-11-24 01:24:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 01:24:26] ANSI_COLOR="0;31"
[2025-11-24 01:24:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 01:24:26] HOME_URL="https://www.centos.org/"
[2025-11-24 01:24:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 01:24:26] 
[2025-11-24 01:24:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 01:24:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 01:24:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 01:24:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 01:24:26] 
[2025-11-24 01:24:26] 2025-11-24 00:23:31,275 | INFO     | ***************************************
[2025-11-24 01:24:26] 2025-11-24 00:23:31,779 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-24 01:24:26] 2025-11-24 00:23:32,019 | INFO     | sufficient remaining disk space (493783875584 B)
[2025-11-24 01:24:26] 2025-11-24 00:23:32,019 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 01:24:26] 2025-11-24 00:23:32,019 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 01:24:26] 2025-11-24 00:23:32,019 | INFO     | update_server=False
[2025-11-24 01:24:26] 2025-11-24 00:23:32,019 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 01:24:26] 2025-11-24 00:23:32,020 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:24:26] 2025-11-24 00:23:32,020 | INFO     | aborting loop
[2025-11-24 01:24:26] 2025-11-24 00:23:32,215 | INFO     | all job control threads have been joined
[2025-11-24 01:24:26] 2025-11-24 00:23:32,305 | INFO     | all payload control threads have been joined
[2025-11-24 01:24:26] 2025-11-24 00:23:32,469 | INFO     | all data control threads have been joined
[2025-11-24 01:24:26] 2025-11-24 00:23:33,025 | INFO     | [job] retrieve thread has finished
[2025-11-24 01:24:26] 2025-11-24 00:23:33,026 | INFO     | [job] job monitor thread has finished
[2025-11-24 01:24:26] 2025-11-24 00:23:33,056 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 01:24:26] 2025-11-24 00:23:33,097 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 01:24:26] 2025-11-24 00:23:33,221 | INFO     | [job] control thread has finished
[2025-11-24 01:24:26] 2025-11-24 00:23:33,271 | INFO     | [payload] failed_post thread has finished
[2025-11-24 01:24:26] 2025-11-24 00:23:33,284 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 01:24:26] 2025-11-24 00:23:33,311 | INFO     | [payload] control thread has finished
[2025-11-24 01:24:26] 2025-11-24 00:23:33,369 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:24:26] 2025-11-24 00:23:33,475 | INFO     | [data] control thread has finished
[2025-11-24 01:24:26] 2025-11-24 00:23:33,539 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 01:24:26] 2025-11-24 00:23:33,652 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 01:24:26] 2025-11-24 00:23:33,659 | INFO     | [data] copytool_in thread has finished
[2025-11-24 01:24:26] 2025-11-24 00:23:34,375 | INFO     | [job] queue monitor thread has finished
[2025-11-24 01:24:26] 2025-11-24 00:23:34,434 | INFO     | [job] validate thread has finished
[2025-11-24 01:24:26] 2025-11-24 00:23:34,503 | INFO     | [payload] validate_post thread has finished
[2025-11-24 01:24:26] 2025-11-24 00:23:35,063 | INFO     | [data] copytool_out thread has finished
[2025-11-24 01:24:26] 2025-11-24 00:23:35,196 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 01:24:26] 2025-11-24 00:23:39,204 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 01:24:26] 2025-11-24 00:24:01,878 | INFO     | PID=27472 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 01:24:26] 2025-11-24 00:24:01,878 | INFO     | .. there are 9 such processes running
[2025-11-24 01:24:26] 2025-11-24 00:24:01,879 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 01:24:26] 2025-11-24 00:24:01,879 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 01:24:26] 2025-11-24 00:24:01,879 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 01:24:26] 2025-11-24 00:24:16,799 | INFO     | [monitor] cgroup control has ended
[2025-11-24 01:24:26] 2025-11-24 00:24:16,820 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140035393660736)>', '<ExcThread(monitor, started 140034489431808)>']
[2025-11-24 01:24:26] 2025-11-24 00:24:16,968 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 01:24:26] 2025-11-24 00:24:16,969 | INFO     | [monitor] control thread has ended
[2025-11-24 01:24:26] 2025-11-24 00:24:21,846 | INFO     | all workflow threads have been joined
[2025-11-24 01:24:26] 2025-11-24 00:24:21,847 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 01:24:26] 2025-11-24 00:24:21,847 | INFO     | traces error code: 0
[2025-11-24 01:24:26] 2025-11-24 00:24:21,847 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 01:24:26] 2025-11-24 00:24:22,124 [wrapper] ==== pilot stdout END ====
[2025-11-24 01:24:26] 2025-11-24 00:24:22,141 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 01:24:26] 2025-11-24 00:24:22,147 [wrapper] pilotpid: 27472
[2025-11-24 01:24:26] 2025-11-24 00:24:22,154 [wrapper] Pilot exit status: 0
[2025-11-24 01:24:26] 2025-11-24 00:24:22,511 [wrapper] pandaids: 6893839991
[2025-11-24 01:24:26] 2025-11-24 00:24:23,537 [wrapper] cleanup supervisor_pilot 29999 27473
[2025-11-24 01:24:26] 2025-11-24 00:24:23,591 [wrapper] Test setup, not cleaning
[2025-11-24 01:24:26] 2025-11-24 00:24:23,649 [wrapper] apfmon messages muted
[2025-11-24 01:24:26] 2025-11-24 00:24:23,738 [wrapper] ==== wrapper stdout END ====
[2025-11-24 01:24:26] 2025-11-24 00:24:23,842 [wrapper] ==== wrapper stderr END ====
[2025-11-24 01:24:26]  *** Error codes and diagnostics ***
[2025-11-24 01:24:26]     "exeErrorCode": 0,
[2025-11-24 01:24:26]     "exeErrorDiag": "",
[2025-11-24 01:24:26]     "pilotErrorCode": 0,
[2025-11-24 01:24:26]     "pilotErrorDiag": "",
[2025-11-24 01:24:26]  *** Listing of results directory ***
[2025-11-24 01:24:26] total 1332580
[2025-11-24 01:24:26] -rw-r--r--. 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-24 01:24:26] -rwx------. 1 boinc boinc     36292 Nov 20 11:19 runpilot2-wrapper.sh
[2025-11-24 01:24:26] -rw-r--r--. 1 boinc boinc      5112 Nov 20 11:20 queuedata.json
[2025-11-24 01:24:26] -rw-r--r--. 1 boinc boinc       100 Nov 22 23:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 01:24:26] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 23:35 run_atlas
[2025-11-24 01:24:26] -rw-r--r--. 1 boinc boinc       105 Nov 22 23:35 job.xml
[2025-11-24 01:24:26] -rw-r--r--. 2 boinc boinc 411486362 Nov 22 23:35 EVNT.47493127._000159.pool.root.1
[2025-11-24 01:24:26] -rw-r--r--. 1 boinc boinc      6389 Nov 22 23:35 init_data.xml
[2025-11-24 01:24:26] -rw-r--r--. 2 boinc boinc     15847 Nov 22 23:35 start_atlas.sh
[2025-11-24 01:24:26] drwxrwx--x. 2 boinc boinc        68 Nov 22 23:35 shared
[2025-11-24 01:24:26] -rw-r--r--. 2 boinc boinc    590103 Nov 22 23:35 input.tar.gz
[2025-11-24 01:24:26] -rw-r--r--. 1 boinc boinc         0 Nov 22 23:35 boinc_lockfile
[2025-11-24 01:24:26] -rw-r--r--. 1 boinc boinc      2786 Nov 22 23:35 pandaJob.out
[2025-11-24 01:24:26] -rw-------. 1 boinc boinc    989784 Nov 22 23:39 agis_schedconf.cvmfs.json
[2025-11-24 01:24:26] drwx------. 5 boinc boinc      4096 Nov 22 23:39 pilot3
[2025-11-24 01:24:26] -rw-r--r--. 1 boinc boinc       533 Nov 24 01:03 boinc_task_state.xml
[2025-11-24 01:24:26] -rw-------. 1 boinc boinc 919260030 Nov 24 01:20 HITS.47523449._001584.pool.root.1
[2025-11-24 01:24:26] -rw-------. 1 boinc boinc      1031 Nov 24 01:21 memory_monitor_summary.json
[2025-11-24 01:24:26] -rw-------. 1 boinc boinc   1526164 Nov 24 01:21 agis_ddmendpoints.agis.ALL.json
[2025-11-24 01:24:26] -rw-------. 1 boinc boinc   2587258 Nov 24 01:21 log.47523449._001584.job.log.tgz.1
[2025-11-24 01:24:26] -rw-------. 1 boinc boinc      8631 Nov 24 01:23 heartbeat.json
[2025-11-24 01:24:26] -rw-------. 1 boinc boinc        95 Nov 24 01:24 pilot_heartbeat.json
[2025-11-24 01:24:26] -rw-r--r--. 1 boinc boinc        29 Nov 24 01:24 wrapper_checkpoint.txt
[2025-11-24 01:24:26] -rw-r--r--. 1 boinc boinc      8192 Nov 24 01:24 boinc_mmap_file
[2025-11-24 01:24:26] -rw-------. 1 boinc boinc      4884 Nov 24 01:24 pilotlog.txt
[2025-11-24 01:24:26] -rw-------. 1 boinc boinc  12366144 Nov 24 01:24 log.47523449._001584.job.log.1
[2025-11-24 01:24:26] -rw-------. 1 boinc boinc       353 Nov 24 01:24 output.list
[2025-11-24 01:24:26] -rw-r--r--. 1 boinc boinc       620 Nov 24 01:24 runtime_log
[2025-11-24 01:24:26] -rw-------. 1 boinc boinc  14970880 Nov 24 01:24 result.tar.gz
[2025-11-24 01:24:26] -rw-------. 1 boinc boinc       662 Nov 24 01:24 WueKDmsvGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSLHKDm2mqbKo.diag
[2025-11-24 01:24:26] -rw-r--r--. 1 boinc boinc      8817 Nov 24 01:24 runtime_log.err
[2025-11-24 01:24:26] -rw-r--r--. 1 boinc boinc     21490 Nov 24 01:24 stderr.txt
[2025-11-24 01:24:26] HITS file was successfully produced:
[2025-11-24 01:24:26] -rw-------. 1 boinc boinc 919260030 Nov 24 01:20 shared/HITS.pool.root.1
[2025-11-24 01:24:26]  *** Contents of shared directory: ***
[2025-11-24 01:24:26] total 1314776
[2025-11-24 01:24:26] -rw-r--r--. 2 boinc boinc 411486362 Nov 22 23:35 ATLAS.root_0
[2025-11-24 01:24:26] -rw-r--r--. 2 boinc boinc     15847 Nov 22 23:35 start_atlas.sh
[2025-11-24 01:24:26] -rw-r--r--. 2 boinc boinc    590103 Nov 22 23:35 input.tar.gz
[2025-11-24 01:24:26] -rw-------. 1 boinc boinc 919260030 Nov 24 01:20 HITS.pool.root.1
[2025-11-24 01:24:26] -rw-------. 1 boinc boinc  14970880 Nov 24 01:24 result.tar.gz
01:24:28 (23680): run_atlas exited; CPU time 338953.617109
01:24:28 (23680): called boinc_finish(0)

</stderr_txt>
]]>

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