Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:38:15 (14811): wrapper (7.7.26015): starting
01:38:15 (14811): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 01:38:15] Arguments: --nthreads 8
[2025-11-23 01:38:15] Threads: 8
[2025-11-23 01:38:15] Checking for CVMFS
[2025-11-23 01:38:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 01:38:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 01:38:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 01:38:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 01:38:18] 2.11.2.0 6410 280140 137820 153191 0 84 12968695 25165825 4632 130560 4 131901788 99.885 76037509 3146 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-23 01:38:18] CVMFS is ok
[2025-11-23 01:38:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 01:38:18] Checking for apptainer binary...
[2025-11-23 01:38:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 01:38:18] Running /usr/bin/apptainer --version
[2025-11-23 01:38:19] apptainer version 1.3.2-1.el7
[2025-11-23 01:38:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 01:38:23] cg-vwn284.simple-grid.lan
[2025-11-23 01:38:23] apptainer works
[2025-11-23 01:38:23] Set ATHENA_PROC_NUMBER=8
[2025-11-23 01:38:23] Set ATHENA_CORE_NUMBER=8
[2025-11-23 01:38:23] Starting ATLAS job with PandaID=6893839927
[2025-11-23 01:38:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 03:18:12]  *** The last 200 lines of the pilot log: ***
[2025-11-24 03:18:12] 2025-11-24 02:17:25,345 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 03:18:12] 2025-11-24 02:17:25,551 | INFO     | time since job start (92112s) is within the limit (172800.0s)
[2025-11-24 03:18:12] 2025-11-24 02:17:27,558 | INFO     | time since job start (92114s) is within the limit (172800.0s)
[2025-11-24 03:18:12] 2025-11-24 02:17:27,850 | INFO     | monitor loop #6184: job 0:6893839927 is in state 'finished'
[2025-11-24 03:18:12] 2025-11-24 02:17:27,851 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 03:18:12] 2025-11-24 02:17:29,565 | INFO     | time since job start (92116s) is within the limit (172800.0s)
[2025-11-24 03:18:12] 2025-11-24 02:17:30,355 | INFO     | monitor loop #6185: job 0:6893839927 is in state 'finished'
[2025-11-24 03:18:12] 2025-11-24 02:17:30,356 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 03:18:12] 2025-11-24 02:17:31,578 | INFO     | time since job start (92118s) is within the limit (172800.0s)
[2025-11-24 03:18:12] 2025-11-24 02:17:32,865 | INFO     | monitor loop #6186: job 0:6893839927 is in state 'finished'
[2025-11-24 03:18:12] 2025-11-24 02:17:32,866 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 03:18:12] 2025-11-24 02:17:33,586 | INFO     | time since job start (92120s) is within the limit (172800.0s)
[2025-11-24 03:18:12] 2025-11-24 02:17:35,371 | INFO     | monitor loop #6187: job 0:6893839927 is in state 'finished'
[2025-11-24 03:18:12] 2025-11-24 02:17:35,372 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 03:18:12] 2025-11-24 02:17:35,595 | INFO     | time since job start (92122s) is within the limit (172800.0s)
[2025-11-24 03:18:12] 2025-11-24 02:17:36,220 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 03:18:12] 2025-11-24 02:17:36,222 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-24 03:18:12] 2025-11-24 02:17:36,224 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6893839927/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 03:18:12] 2025-11-24 02:17:36,224 | INFO     | extracted standard info from prmon json
[2025-11-24 03:18:12] 2025-11-24 02:17:36,224 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 03:18:12] 2025-11-24 02:17:36,225 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 03:18:12] 2025-11-24 02:17:36,278 | INFO     | fitting pss+swap vs Time
[2025-11-24 03:18:12] 2025-11-24 02:17:36,281 | INFO     | sum of square deviations: 1048625979390.3859
[2025-11-24 03:18:12] 2025-11-24 02:17:36,343 | INFO     | sum of deviations: 3791346919025.57
[2025-11-24 03:18:12] 2025-11-24 02:17:36,344 | INFO     | mean x: 1763904797.3271153
[2025-11-24 03:18:12] 2025-11-24 02:17:36,344 | INFO     | mean y: 2820120.4183877413
[2025-11-24 03:18:12] 2025-11-24 02:17:36,344 | INFO     | intersect: -6374644438.192275
[2025-11-24 03:18:12] 2025-11-24 02:17:36,346 | INFO     | chi2: 32.021298266074425
[2025-11-24 03:18:12] 2025-11-24 02:17:36,349 | INFO     | sum of square deviations: 1038182186461.5515
[2025-11-24 03:18:12] 2025-11-24 02:17:36,411 | INFO     | sum of deviations: 4302686008586.6343
[2025-11-24 03:18:12] 2025-11-24 02:17:36,411 | INFO     | mean x: 1763904644.8315508
[2025-11-24 03:18:12] 2025-11-24 02:17:36,411 | INFO     | mean y: 2827584.9231283423
[2025-11-24 03:18:12] 2025-11-24 02:17:36,411 | INFO     | intersect: -7307573166.28333
[2025-11-24 03:18:12] 2025-11-24 02:17:36,413 | INFO     | chi2: 28.538414646014363
[2025-11-24 03:18:12] 2025-11-24 02:17:36,413 | INFO     | current chi2=28.538414646014363 (change=10.876772050651265 %)
[2025-11-24 03:18:12] 2025-11-24 02:17:36,413 | INFO     | right removable region: 1495
[2025-11-24 03:18:12] 2025-11-24 02:17:36,415 | INFO     | sum of square deviations: 1038180971341.5509
[2025-11-24 03:18:12] 2025-11-24 02:17:36,495 | INFO     | sum of deviations: 3148590510923.852
[2025-11-24 03:18:12] 2025-11-24 02:17:36,496 | INFO     | mean x: 1763904949.8315508
[2025-11-24 03:18:12] 2025-11-24 02:17:36,496 | INFO     | mean y: 2829505.070855615
[2025-11-24 03:18:12] 2025-11-24 02:17:36,496 | INFO     | intersect: -5346733375.121915
[2025-11-24 03:18:12] 2025-11-24 02:17:36,498 | INFO     | chi2: 26.966508467437166
[2025-11-24 03:18:12] 2025-11-24 02:17:36,499 | INFO     | current chi2=26.966508467437166 (change=15.785711611801363 %)
[2025-11-24 03:18:12] 2025-11-24 02:17:36,499 | INFO     | left removable region: 10
[2025-11-24 03:18:12] 2025-11-24 02:17:36,501 | INFO     | sum of square deviations: 1015448015433.9033
[2025-11-24 03:18:12] 2025-11-24 02:17:36,578 | INFO     | sum of deviations: 3174694121878.0625
[2025-11-24 03:18:12] 2025-11-24 02:17:36,579 | INFO     | mean x: 1763904919.3414142
[2025-11-24 03:18:12] 2025-11-24 02:17:36,579 | INFO     | mean y: 2847104.966329966
[2025-11-24 03:18:12] 2025-11-24 02:17:36,579 | INFO     | intersect: -5511820799.123426
[2025-11-24 03:18:12] 2025-11-24 02:17:36,581 | INFO     | chi2: 18.745801961973893
[2025-11-24 03:18:12] 2025-11-24 02:17:36,581 | INFO     | current memory leak: 3.13 B/s (using 1485 data points, chi2=18.75)
[2025-11-24 03:18:12] 2025-11-24 02:17:36,583 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-24 03:18:12] 2025-11-24 02:17:36,584 | INFO     | ..............................
[2025-11-24 03:18:12] 2025-11-24 02:17:36,584 | INFO     | . Timing measurements:
[2025-11-24 03:18:12] 2025-11-24 02:17:36,584 | INFO     | . get job = 0 s
[2025-11-24 03:18:12] 2025-11-24 02:17:36,584 | INFO     | . initial setup = 14 s
[2025-11-24 03:18:12] 2025-11-24 02:17:36,584 | INFO     | . payload setup = 161 s
[2025-11-24 03:18:12] 2025-11-24 02:17:36,585 | INFO     | . stage-in = 0 s
[2025-11-24 03:18:12] 2025-11-24 02:17:36,585 | INFO     | . payload execution = 91664 s
[2025-11-24 03:18:12] 2025-11-24 02:17:36,585 | INFO     | . stage-out = 5 s
[2025-11-24 03:18:12] 2025-11-24 02:17:36,585 | INFO     | . log creation = 2 s
[2025-11-24 03:18:12] 2025-11-24 02:17:36,585 | INFO     | ..............................
[2025-11-24 03:18:12] 2025-11-24 02:17:36,712 | INFO     | 
[2025-11-24 03:18:12] 2025-11-24 02:17:36,712 | INFO     | job summary report
[2025-11-24 03:18:12] 2025-11-24 02:17:36,712 | INFO     | --------------------------------------------------
[2025-11-24 03:18:12] 2025-11-24 02:17:36,712 | INFO     | PanDA job id: 6893839927
[2025-11-24 03:18:12] 2025-11-24 02:17:36,712 | INFO     | task id: 47523449
[2025-11-24 03:18:12] 2025-11-24 02:17:36,713 | INFO     | errors: (none)
[2025-11-24 03:18:12] 2025-11-24 02:17:36,713 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 03:18:12] 2025-11-24 02:17:36,713 | INFO     | pilot state: finished 
[2025-11-24 03:18:12] 2025-11-24 02:17:36,713 | INFO     | transexitcode: 0
[2025-11-24 03:18:12] 2025-11-24 02:17:36,713 | INFO     | exeerrorcode: 0
[2025-11-24 03:18:12] 2025-11-24 02:17:36,713 | INFO     | exeerrordiag: 
[2025-11-24 03:18:12] 2025-11-24 02:17:36,713 | INFO     | exitcode: 0
[2025-11-24 03:18:12] 2025-11-24 02:17:36,713 | INFO     | exitmsg: OK
[2025-11-24 03:18:12] 2025-11-24 02:17:36,713 | INFO     | cpuconsumptiontime: 337888 s
[2025-11-24 03:18:12] 2025-11-24 02:17:36,713 | INFO     | nevents: 1000
[2025-11-24 03:18:12] 2025-11-24 02:17:36,713 | INFO     | neventsw: 0
[2025-11-24 03:18:12] 2025-11-24 02:17:36,714 | INFO     | pid: 25163
[2025-11-24 03:18:12] 2025-11-24 02:17:36,714 | INFO     | pgrp: 25163
[2025-11-24 03:18:12] 2025-11-24 02:17:36,714 | INFO     | corecount: 8
[2025-11-24 03:18:12] 2025-11-24 02:17:36,714 | INFO     | event service: False
[2025-11-24 03:18:12] 2025-11-24 02:17:36,714 | INFO     | sizes: {0: 2298581, 1: 2298836, 2: 2298864, 13: 2298864, 23: 2298920, 34: 2298948, 45: 2299104, 56: 2299132, 66: 2299160, 77: 2299188, 88: 2299244, 90: 2299814, 99
[2025-11-24 03:18:12] 2025-11-24 02:17:36,714 | INFO     | --------------------------------------------------
[2025-11-24 03:18:12] 2025-11-24 02:17:36,714 | INFO     | 
[2025-11-24 03:18:12] 2025-11-24 02:17:36,714 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-11-24 03:18:12] 2025-11-24 02:17:37,104 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 03:18:12] 2025-11-24 02:17:37,104 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 03:18:12] 2025-11-24 02:17:37,104 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 03:18:12] 2025-11-24 02:17:37,105 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 03:18:12] 2025-11-24 02:17:37,105 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 03:18:12] 2025-11-24 02:17:37,105 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 03:18:12] 2025-11-24 02:17:37,105 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 03:18:12] 2025-11-24 02:17:37,105 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 03:18:12] 2025-11-24 02:17:37,105 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 03:18:12] 2025-11-24 02:17:37,105 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 03:18:12] 2025-11-24 02:17:37,105 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 03:18:12] 2025-11-24 02:17:37,106 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 03:18:12] 2025-11-24 02:17:37,106 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 03:18:12] 2025-11-24 02:17:37,106 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 03:18:12] 2025-11-24 02:17:37,106 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 03:18:12] 2025-11-24 02:17:37,106 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 03:18:12] 2025-11-24 02:17:37,106 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 03:18:12] 2025-11-24 02:17:37,106 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 03:18:12] 2025-11-24 02:17:37,106 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 03:18:12] 2025-11-24 02:17:37,107 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 03:18:12] 2025-11-24 02:17:37,107 | INFO     | job 6893839927 has completed (purged errors)
[2025-11-24 03:18:12] 2025-11-24 02:17:37,107 | INFO     | overall cleanup function is called
[2025-11-24 03:18:12] 2025-11-24 02:17:38,132 | INFO     | --- collectZombieJob: --- 10, [25163]
[2025-11-24 03:18:12] 2025-11-24 02:17:38,133 | INFO     | zombie collector waiting for pid 25163
[2025-11-24 03:18:12] 2025-11-24 02:17:38,133 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 03:18:12] 2025-11-24 02:17:38,133 | INFO     | collected zombie processes
[2025-11-24 03:18:12] 2025-11-24 02:17:38,133 | INFO     | will attempt to kill all subprocesses of pid=25163
[2025-11-24 03:18:12] 2025-11-24 02:17:38,284 | INFO     | process IDs to be killed: [25163] (in reverse order)
[2025-11-24 03:18:12] 2025-11-24 02:17:39,312 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 03:18:12] 2025-11-24 02:17:39,317 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 03:18:12] 2025-11-24 02:17:39,321 | INFO     | did not find any defunct processes belonging to 25163
[2025-11-24 03:18:12] 2025-11-24 02:17:39,324 | INFO     | did not find any defunct processes belonging to 25163
[2025-11-24 03:18:12] 2025-11-24 02:17:39,378 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 03:18:12] 2025-11-24 02:17:39,379 | INFO     | ready for new job
[2025-11-24 03:18:12] 2025-11-24 02:17:39,379 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 03:18:12] 2025-11-24 02:17:39,386 | INFO     | ***************************************
[2025-11-24 03:18:12] 2025-11-24 02:17:39,387 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 03:18:12] 2025-11-24 02:17:39,387 | INFO     | ***************************************
[2025-11-24 03:18:12] 2025-11-24 02:17:39,387 | INFO     | 
[2025-11-24 03:18:12] 2025-11-24 02:17:39,387 | INFO     | pilot is running in a VM
[2025-11-24 03:18:12] 2025-11-24 02:17:39,388 | INFO     | architecture information:
[2025-11-24 03:18:12] 2025-11-24 02:17:39,402 | INFO     | executing command: cat /etc/os-release
[2025-11-24 03:18:12] 2025-11-24 02:17:39,726 | INFO     | cat /etc/os-release:
[2025-11-24 03:18:12] NAME="CentOS Linux"
[2025-11-24 03:18:12] VERSION="7 (Core)"
[2025-11-24 03:18:12] ID="centos"
[2025-11-24 03:18:12] ID_LIKE="rhel fedora"
[2025-11-24 03:18:12] VERSION_ID="7"
[2025-11-24 03:18:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 03:18:12] ANSI_COLOR="0;31"
[2025-11-24 03:18:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 03:18:12] HOME_URL="https://www.centos.org/"
[2025-11-24 03:18:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 03:18:12] 
[2025-11-24 03:18:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 03:18:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 03:18:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 03:18:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 03:18:12] 
[2025-11-24 03:18:12] 2025-11-24 02:17:39,726 | INFO     | ***************************************
[2025-11-24 03:18:12] 2025-11-24 02:17:40,230 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-11-24 03:18:12] 2025-11-24 02:17:40,516 | INFO     | sufficient remaining disk space (495117664256 B)
[2025-11-24 03:18:12] 2025-11-24 02:17:40,517 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 03:18:12] 2025-11-24 02:17:40,517 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 03:18:12] 2025-11-24 02:17:40,517 | INFO     | update_server=False
[2025-11-24 03:18:12] 2025-11-24 02:17:40,517 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 03:18:12] 2025-11-24 02:17:40,518 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 03:18:12] 2025-11-24 02:17:40,518 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 03:18:12] 2025-11-24 02:17:41,216 | INFO     | all payload control threads have been joined
[2025-11-24 03:18:12] 2025-11-24 02:17:41,401 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 03:18:12] 2025-11-24 02:17:41,401 | INFO     | aborting loop
[2025-11-24 03:18:12] 2025-11-24 02:17:41,514 | INFO     | all data control threads have been joined
[2025-11-24 03:18:12] 2025-11-24 02:17:41,522 | INFO     | [job] retrieve thread has finished
[2025-11-24 03:18:12] 2025-11-24 02:17:41,726 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 03:18:12] 2025-11-24 02:17:41,952 | INFO     | all job control threads have been joined
[2025-11-24 03:18:12] 2025-11-24 02:17:42,222 | INFO     | [payload] control thread has finished
[2025-11-24 03:18:12] 2025-11-24 02:17:42,409 | INFO     | [job] job monitor thread has finished
[2025-11-24 03:18:12] 2025-11-24 02:17:42,428 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 03:18:12] 2025-11-24 02:17:42,524 | INFO     | [data] control thread has finished
[2025-11-24 03:18:12] 2025-11-24 02:17:42,528 | INFO     | [data] copytool_out thread has finished
[2025-11-24 03:18:12] 2025-11-24 02:17:42,592 | INFO     | [data] copytool_in thread has finished
[2025-11-24 03:18:12] 2025-11-24 02:17:42,707 | INFO     | [payload] validate_post thread has finished
[2025-11-24 03:18:12] 2025-11-24 02:17:42,732 | INFO     | [job] queue monitor thread has finished
[2025-11-24 03:18:12] 2025-11-24 02:17:42,773 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 03:18:12] 2025-11-24 02:17:42,774 | INFO     | [job] validate thread has finished
[2025-11-24 03:18:12] 2025-11-24 02:17:42,884 | INFO     | [payload] failed_post thread has finished
[2025-11-24 03:18:12] 2025-11-24 02:17:42,921 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 03:18:12] 2025-11-24 02:17:42,958 | INFO     | [job] control thread has finished
[2025-11-24 03:18:12] 2025-11-24 02:17:44,528 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 03:18:12] 2025-11-24 02:17:50,994 | INFO     | job.realtimelogging is not enabled
[2025-11-24 03:18:12] 2025-11-24 02:17:51,999 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 03:18:12] 2025-11-24 02:17:53,465 | INFO     | [monitor] cgroup control has ended
[2025-11-24 03:18:12] 2025-11-24 02:17:55,137 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139791800055616)>', '<ExcThread(monitor, started 139791219799808)>']
[2025-11-24 03:18:12] 2025-11-24 02:18:00,163 | INFO     | all workflow threads have been joined
[2025-11-24 03:18:12] 2025-11-24 02:18:00,163 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 03:18:12] 2025-11-24 02:18:00,164 | INFO     | traces error code: 0
[2025-11-24 03:18:12] 2025-11-24 02:18:00,164 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 03:18:12] 2025-11-24 02:18:08,887 | INFO     | PID=18610 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 03:18:12] 2025-11-24 02:18:08,888 | INFO     | .. there are 9 such processes running
[2025-11-24 03:18:12] 2025-11-24 02:18:08,895 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 03:18:12] 2025-11-24 02:18:08,896 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 03:18:12] 2025-11-24 02:18:08,896 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 03:18:12] 2025-11-24 02:18:08,896 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 03:18:12] 2025-11-24 02:18:08,896 | INFO     | [monitor] control thread has ended
[2025-11-24 03:18:12] 2025-11-24 02:18:09,306 [wrapper] ==== pilot stdout END ====
[2025-11-24 03:18:12] 2025-11-24 02:18:09,364 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 03:18:12] 2025-11-24 02:18:09,413 [wrapper] pilotpid: 18610
[2025-11-24 03:18:12] 2025-11-24 02:18:09,476 [wrapper] Pilot exit status: 0
[2025-11-24 03:18:12] 2025-11-24 02:18:09,883 [wrapper] pandaids: 6893839927
[2025-11-24 03:18:12] 2025-11-24 02:18:09,943 [wrapper] cleanup supervisor_pilot   793 18611
[2025-11-24 03:18:12] 2025-11-24 02:18:09,951 [wrapper] Test setup, not cleaning
[2025-11-24 03:18:12] 2025-11-24 02:18:09,963 [wrapper] apfmon messages muted
[2025-11-24 03:18:12] 2025-11-24 02:18:09,974 [wrapper] ==== wrapper stdout END ====
[2025-11-24 03:18:12] 2025-11-24 02:18:10,041 [wrapper] ==== wrapper stderr END ====
[2025-11-24 03:18:12]  *** Error codes and diagnostics ***
[2025-11-24 03:18:13]     "exeErrorCode": 0,
[2025-11-24 03:18:13]     "exeErrorDiag": "",
[2025-11-24 03:18:13]     "pilotErrorCode": 0,
[2025-11-24 03:18:13]     "pilotErrorDiag": "",
[2025-11-24 03:18:13]  *** Listing of results directory ***
[2025-11-24 03:18:13] total 1325688
[2025-11-24 03:18:13] -rw-r--r--. 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-24 03:18:13] -rwx------. 1 boinc boinc     36292 Nov 20 11:19 runpilot2-wrapper.sh
[2025-11-24 03:18:13] -rw-r--r--. 1 boinc boinc      5112 Nov 20 11:20 queuedata.json
[2025-11-24 03:18:13] -rw-r--r--. 1 boinc boinc       100 Nov 23 01:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 03:18:13] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 01:38 run_atlas
[2025-11-24 03:18:13] -rw-r--r--. 1 boinc boinc       105 Nov 23 01:38 job.xml
[2025-11-24 03:18:13] -rw-r--r--. 2 boinc boinc 411871045 Nov 23 01:38 EVNT.47493127._000154.pool.root.1
[2025-11-24 03:18:13] -rw-r--r--. 1 boinc boinc      6392 Nov 23 01:38 init_data.xml
[2025-11-24 03:18:13] -rw-r--r--. 2 boinc boinc     15847 Nov 23 01:38 start_atlas.sh
[2025-11-24 03:18:13] drwxrwx--x. 2 boinc boinc        68 Nov 23 01:38 shared
[2025-11-24 03:18:13] -rw-r--r--. 2 boinc boinc    590105 Nov 23 01:38 input.tar.gz
[2025-11-24 03:18:13] -rw-r--r--. 1 boinc boinc         0 Nov 23 01:38 boinc_lockfile
[2025-11-24 03:18:13] -rw-r--r--. 1 boinc boinc      2786 Nov 23 01:38 pandaJob.out
[2025-11-24 03:18:13] -rw-------. 1 boinc boinc    989784 Nov 23 01:42 agis_schedconf.cvmfs.json
[2025-11-24 03:18:13] drwx------. 5 boinc boinc      4096 Nov 23 01:42 pilot3
[2025-11-24 03:18:13] -rw-r--r--. 1 boinc boinc       533 Nov 24 02:46 boinc_task_state.xml
[2025-11-24 03:18:13] -rw-------. 1 boinc boinc 911888205 Nov 24 03:14 HITS.47523449._001538.pool.root.1
[2025-11-24 03:18:13] -rw-------. 1 boinc boinc      1030 Nov 24 03:15 memory_monitor_summary.json
[2025-11-24 03:18:13] -rw-------. 1 boinc boinc   1526164 Nov 24 03:15 agis_ddmendpoints.agis.ALL.json
[2025-11-24 03:18:13] -rw-------. 1 boinc boinc   2585236 Nov 24 03:15 log.47523449._001538.job.log.tgz.1
[2025-11-24 03:18:13] -rw-------. 1 boinc boinc      7264 Nov 24 03:17 heartbeat.json
[2025-11-24 03:18:13] -rw-r--r--. 1 boinc boinc      8192 Nov 24 03:17 boinc_mmap_file
[2025-11-24 03:18:13] -rw-r--r--. 1 boinc boinc        29 Nov 24 03:17 wrapper_checkpoint.txt
[2025-11-24 03:18:13] -rw-------. 1 boinc boinc        95 Nov 24 03:18 pilot_heartbeat.json
[2025-11-24 03:18:13] -rw-------. 1 boinc boinc       820 Nov 24 03:18 pilotlog.txt
[2025-11-24 03:18:13] -rw-------. 1 boinc boinc  12333663 Nov 24 03:18 log.47523449._001538.job.log.1
[2025-11-24 03:18:13] -rw-------. 1 boinc boinc       353 Nov 24 03:18 output.list
[2025-11-24 03:18:13] -rw-r--r--. 1 boinc boinc       620 Nov 24 03:18 runtime_log
[2025-11-24 03:18:13] -rw-------. 1 boinc boinc  14940160 Nov 24 03:18 result.tar.gz
[2025-11-24 03:18:13] -rw-------. 1 boinc boinc       662 Nov 24 03:18 VAFODmrvGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1KHKDmAdwNUm.diag
[2025-11-24 03:18:13] -rw-r--r--. 1 boinc boinc      8833 Nov 24 03:18 runtime_log.err
[2025-11-24 03:18:13] -rw-r--r--. 1 boinc boinc     21426 Nov 24 03:18 stderr.txt
[2025-11-24 03:18:13] HITS file was successfully produced:
[2025-11-24 03:18:13] -rw-------. 1 boinc boinc 911888205 Nov 24 03:14 shared/HITS.pool.root.1
[2025-11-24 03:18:13]  *** Contents of shared directory: ***
[2025-11-24 03:18:13] total 1307924
[2025-11-24 03:18:13] -rw-r--r--. 2 boinc boinc 411871045 Nov 23 01:38 ATLAS.root_0
[2025-11-24 03:18:13] -rw-r--r--. 2 boinc boinc     15847 Nov 23 01:38 start_atlas.sh
[2025-11-24 03:18:13] -rw-r--r--. 2 boinc boinc    590105 Nov 23 01:38 input.tar.gz
[2025-11-24 03:18:13] -rw-------. 1 boinc boinc 911888205 Nov 24 03:14 HITS.pool.root.1
[2025-11-24 03:18:13] -rw-------. 1 boinc boinc  14940160 Nov 24 03:18 result.tar.gz
03:18:14 (14811): run_atlas exited; CPU time 338458.893828
03:18:14 (14811): called boinc_finish(0)

</stderr_txt>
]]>

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