Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:34:21 (2288): wrapper (7.7.26015): starting
14:34:21 (2288): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 14:34:21] Arguments: --nthreads 8
[2025-11-23 14:34:21] Threads: 8
[2025-11-23 14:34:21] Checking for CVMFS
[2025-11-23 14:34:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 14:34:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 14:34:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 14:34:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 14:34:24] 2.11.2.0 12124 206978 140236 153210 2 128 22230530 25165825 4296 130560 25 84607859 99.881 38728523 2770 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-23 14:34:24] CVMFS is ok
[2025-11-23 14:34:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 14:34:24] Checking for apptainer binary...
[2025-11-23 14:34:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 14:34:24] Running /usr/bin/apptainer --version
[2025-11-23 14:34:24] apptainer version 1.3.2-1.el7
[2025-11-23 14:34:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 14:34:29] cg-vwn300.simple-grid.lan
[2025-11-23 14:34:29] apptainer works
[2025-11-23 14:34:29] Set ATHENA_PROC_NUMBER=8
[2025-11-23 14:34:29] Set ATHENA_CORE_NUMBER=8
[2025-11-23 14:34:29] Starting ATLAS job with PandaID=6893839060
[2025-11-23 14:34:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 12:32:50]  *** The last 200 lines of the pilot log: ***
[2025-11-24 12:32:50] 2025-11-24 11:31:58,478 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.9959999999996
[2025-11-24 12:32:50] 2025-11-24 11:31:58,480 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6893839060/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 12:32:50] 2025-11-24 11:31:58,481 | INFO     | extracted standard info from prmon json
[2025-11-24 12:32:50] 2025-11-24 11:31:58,481 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 12:32:50] 2025-11-24 11:31:58,481 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 12:32:50] 2025-11-24 11:31:58,521 | INFO     | fitting pss+swap vs Time
[2025-11-24 12:32:50] 2025-11-24 11:31:58,523 | INFO     | sum of square deviations: 654860649117.968
[2025-11-24 12:32:50] 2025-11-24 11:31:58,585 | INFO     | sum of deviations: 3200292075993.0547
[2025-11-24 12:32:50] 2025-11-24 11:31:58,585 | INFO     | mean x: 1763944711.2369447
[2025-11-24 12:32:50] 2025-11-24 11:31:58,590 | INFO     | mean y: 2839465.1675759936
[2025-11-24 12:32:50] 2025-11-24 11:31:58,591 | INFO     | intersect: -8617526240.826347
[2025-11-24 12:32:50] 2025-11-24 11:31:58,592 | INFO     | chi2: 14.78392033313257
[2025-11-24 12:32:50] 2025-11-24 11:31:58,594 | INFO     | sum of square deviations: 647234562242.7888
[2025-11-24 12:32:50] 2025-11-24 11:31:58,647 | INFO     | sum of deviations: 3644074854505.6714
[2025-11-24 12:32:50] 2025-11-24 11:31:58,648 | INFO     | mean x: 1763944558.741784
[2025-11-24 12:32:50] 2025-11-24 11:31:58,648 | INFO     | mean y: 2848336.9929577466
[2025-11-24 12:32:50] 2025-11-24 11:31:58,648 | INFO     | intersect: -9928552713.314062
[2025-11-24 12:32:50] 2025-11-24 11:31:58,650 | INFO     | chi2: 11.371809711621994
[2025-11-24 12:32:50] 2025-11-24 11:31:58,650 | INFO     | current chi2=11.371809711621994 (change=23.079876951606806 %)
[2025-11-24 12:32:50] 2025-11-24 11:31:58,650 | INFO     | right removable region: 1277
[2025-11-24 12:32:50] 2025-11-24 11:31:58,652 | INFO     | sum of square deviations: 647233594172.7898
[2025-11-24 12:32:50] 2025-11-24 11:31:58,723 | INFO     | sum of deviations: 2692545347634.7905
[2025-11-24 12:32:50] 2025-11-24 11:31:58,724 | INFO     | mean x: 1763944863.741784
[2025-11-24 12:32:50] 2025-11-24 11:31:58,724 | INFO     | mean y: 2849615.7417840376
[2025-11-24 12:32:50] 2025-11-24 11:31:58,724 | INFO     | intersect: -7335307085.506741
[2025-11-24 12:32:50] 2025-11-24 11:31:58,726 | INFO     | chi2: 10.5719205387285
[2025-11-24 12:32:50] 2025-11-24 11:31:58,726 | INFO     | current chi2=10.5719205387285 (change=28.49041187650656 %)
[2025-11-24 12:32:50] 2025-11-24 11:31:58,728 | INFO     | sum of square deviations: 639665982202.5487
[2025-11-24 12:32:50] 2025-11-24 11:31:58,798 | INFO     | sum of deviations: 2249394589479.984
[2025-11-24 12:32:50] 2025-11-24 11:31:58,798 | INFO     | mean x: 1763945016.2466614
[2025-11-24 12:32:50] 2025-11-24 11:31:58,798 | INFO     | mean y: 2858544.2325216024
[2025-11-24 12:32:50] 2025-11-24 11:31:58,798 | INFO     | intersect: -6200079373.496274
[2025-11-24 12:32:50] 2025-11-24 11:31:58,800 | INFO     | chi2: 7.469863611225776
[2025-11-24 12:32:50] 2025-11-24 11:31:58,800 | INFO     | current chi2=7.469863611225776 (change=29.342416225498923 %)
[2025-11-24 12:32:50] 2025-11-24 11:31:58,802 | INFO     | sum of square deviations: 632157813242.2507
[2025-11-24 12:32:50] 2025-11-24 11:31:58,880 | INFO     | sum of deviations: 2082510693903.9712
[2025-11-24 12:32:50] 2025-11-24 11:31:58,880 | INFO     | mean x: 1763945168.7492113
[2025-11-24 12:32:50] 2025-11-24 11:31:58,881 | INFO     | mean y: 2861929.974763407
[2025-11-24 12:32:50] 2025-11-24 11:31:58,881 | INFO     | intersect: -5808083692.195015
[2025-11-24 12:32:50] 2025-11-24 11:31:58,882 | INFO     | chi2: 6.974702366292989
[2025-11-24 12:32:50] 2025-11-24 11:31:58,883 | INFO     | current chi2=6.974702366292989 (change=6.628785620511929 %)
[2025-11-24 12:32:50] 2025-11-24 11:31:58,883 | INFO     | left removable region: 30
[2025-11-24 12:32:50] 2025-11-24 11:31:58,885 | INFO     | sum of square deviations: 601266634319.9233
[2025-11-24 12:32:50] 2025-11-24 11:31:58,967 | INFO     | sum of deviations: 2445401909535.706
[2025-11-24 12:32:50] 2025-11-24 11:31:58,968 | INFO     | mean x: 1763945443.2534082
[2025-11-24 12:32:50] 2025-11-24 11:31:58,968 | INFO     | mean y: 2876541.1275060144
[2025-11-24 12:32:50] 2025-11-24 11:31:58,968 | INFO     | intersect: -7171237751.989123
[2025-11-24 12:32:50] 2025-11-24 11:31:58,970 | INFO     | chi2: 2.7029849535169452
[2025-11-24 12:32:50] 2025-11-24 11:31:58,970 | INFO     | current memory leak: 4.07 B/s (using 1247 data points, chi2=2.70)
[2025-11-24 12:32:50] 2025-11-24 11:31:58,972 | INFO     | could have reported an average CPU frequency of 1999 MHz (44 samples)
[2025-11-24 12:32:50] 2025-11-24 11:31:58,972 | INFO     | ..............................
[2025-11-24 12:32:50] 2025-11-24 11:31:58,972 | INFO     | . Timing measurements:
[2025-11-24 12:32:50] 2025-11-24 11:31:58,972 | INFO     | . get job = 0 s
[2025-11-24 12:32:50] 2025-11-24 11:31:58,972 | INFO     | . initial setup = 7 s
[2025-11-24 12:32:50] 2025-11-24 11:31:58,972 | INFO     | . payload setup = 142 s
[2025-11-24 12:32:50] 2025-11-24 11:31:58,972 | INFO     | . stage-in = 0 s
[2025-11-24 12:32:50] 2025-11-24 11:31:58,972 | INFO     | . payload execution = 78375 s
[2025-11-24 12:32:50] 2025-11-24 11:31:58,973 | INFO     | . stage-out = 6 s
[2025-11-24 12:32:50] 2025-11-24 11:31:58,973 | INFO     | . log creation = 2 s
[2025-11-24 12:32:50] 2025-11-24 11:31:58,973 | INFO     | ..............................
[2025-11-24 12:32:50] 2025-11-24 11:31:59,112 | INFO     | 
[2025-11-24 12:32:50] 2025-11-24 11:31:59,112 | INFO     | job summary report
[2025-11-24 12:32:50] 2025-11-24 11:31:59,112 | INFO     | --------------------------------------------------
[2025-11-24 12:32:50] 2025-11-24 11:31:59,112 | INFO     | PanDA job id: 6893839060
[2025-11-24 12:32:50] 2025-11-24 11:31:59,112 | INFO     | task id: 47523449
[2025-11-24 12:32:50] 2025-11-24 11:31:59,112 | INFO     | errors: (none)
[2025-11-24 12:32:50] 2025-11-24 11:31:59,112 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 12:32:50] 2025-11-24 11:31:59,113 | INFO     | pilot state: finished 
[2025-11-24 12:32:50] 2025-11-24 11:31:59,113 | INFO     | transexitcode: 0
[2025-11-24 12:32:50] 2025-11-24 11:31:59,113 | INFO     | exeerrorcode: 0
[2025-11-24 12:32:50] 2025-11-24 11:31:59,113 | INFO     | exeerrordiag: 
[2025-11-24 12:32:50] 2025-11-24 11:31:59,113 | INFO     | exitcode: 0
[2025-11-24 12:32:50] 2025-11-24 11:31:59,113 | INFO     | exitmsg: OK
[2025-11-24 12:32:50] 2025-11-24 11:31:59,113 | INFO     | cpuconsumptiontime: 344064 s
[2025-11-24 12:32:50] 2025-11-24 11:31:59,113 | INFO     | nevents: 1000
[2025-11-24 12:32:50] 2025-11-24 11:31:59,113 | INFO     | neventsw: 0
[2025-11-24 12:32:50] 2025-11-24 11:31:59,113 | INFO     | pid: 12667
[2025-11-24 12:32:50] 2025-11-24 11:31:59,114 | INFO     | pgrp: 12667
[2025-11-24 12:32:50] 2025-11-24 11:31:59,114 | INFO     | corecount: 8
[2025-11-24 12:32:50] 2025-11-24 11:31:59,114 | INFO     | event service: False
[2025-11-24 12:32:50] 2025-11-24 11:31:59,114 | INFO     | sizes: {0: 2297979, 1: 2298664, 2: 2298863, 13: 2298863, 23: 2298919, 34: 2298947, 45: 2299103, 56: 2299131, 66: 2299159, 77: 2299187, 88: 2299243, 98: 2299813, 99
[2025-11-24 12:32:50] 2025-11-24 11:31:59,114 | INFO     | --------------------------------------------------
[2025-11-24 12:32:50] 2025-11-24 11:31:59,114 | INFO     | 
[2025-11-24 12:32:50] 2025-11-24 11:31:59,114 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-24 12:32:50] 2025-11-24 11:31:59,186 | INFO     | time since job start (78815s) is within the limit (172800.0s)
[2025-11-24 12:32:50] 2025-11-24 11:31:59,671 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 12:32:50] 2025-11-24 11:31:59,671 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 12:32:50] 2025-11-24 11:31:59,672 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 12:32:50] 2025-11-24 11:31:59,672 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 12:32:50] 2025-11-24 11:31:59,672 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 12:32:50] 2025-11-24 11:31:59,672 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 12:32:50] 2025-11-24 11:31:59,672 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 12:32:50] 2025-11-24 11:31:59,672 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 12:32:50] 2025-11-24 11:31:59,672 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 12:32:50] 2025-11-24 11:31:59,672 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 12:32:50] 2025-11-24 11:31:59,672 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 12:32:50] 2025-11-24 11:31:59,672 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 12:32:50] 2025-11-24 11:31:59,672 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 12:32:50] 2025-11-24 11:31:59,673 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 12:32:50] 2025-11-24 11:31:59,673 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 12:32:50] 2025-11-24 11:31:59,673 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 12:32:50] 2025-11-24 11:31:59,673 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 12:32:50] 2025-11-24 11:31:59,673 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 12:32:50] 2025-11-24 11:31:59,673 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 12:32:50] 2025-11-24 11:31:59,673 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 12:32:50] 2025-11-24 11:31:59,673 | INFO     | job 6893839060 has completed (purged errors)
[2025-11-24 12:32:50] 2025-11-24 11:31:59,673 | INFO     | overall cleanup function is called
[2025-11-24 12:32:50] 2025-11-24 11:32:00,704 | INFO     | --- collectZombieJob: --- 10, [12667]
[2025-11-24 12:32:50] 2025-11-24 11:32:00,705 | INFO     | zombie collector waiting for pid 12667
[2025-11-24 12:32:50] 2025-11-24 11:32:00,705 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 12:32:50] 2025-11-24 11:32:00,705 | INFO     | collected zombie processes
[2025-11-24 12:32:50] 2025-11-24 11:32:00,705 | INFO     | will attempt to kill all subprocesses of pid=12667
[2025-11-24 12:32:50] 2025-11-24 11:32:00,834 | INFO     | process IDs to be killed: [12667] (in reverse order)
[2025-11-24 12:32:50] 2025-11-24 11:32:01,361 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 12:32:50] 2025-11-24 11:32:01,361 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 12:32:50] 2025-11-24 11:32:01,365 | INFO     | did not find any defunct processes belonging to 12667
[2025-11-24 12:32:50] 2025-11-24 11:32:01,368 | INFO     | did not find any defunct processes belonging to 12667
[2025-11-24 12:32:50] 2025-11-24 11:32:01,383 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 12:32:50] 2025-11-24 11:32:01,383 | INFO     | ready for new job
[2025-11-24 12:32:50] 2025-11-24 11:32:01,383 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 12:32:50] 2025-11-24 11:32:01,389 | INFO     | ***************************************
[2025-11-24 12:32:50] 2025-11-24 11:32:01,389 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 12:32:50] 2025-11-24 11:32:01,389 | INFO     | ***************************************
[2025-11-24 12:32:50] 2025-11-24 11:32:01,389 | INFO     | 
[2025-11-24 12:32:50] 2025-11-24 11:32:01,390 | INFO     | pilot is running in a VM
[2025-11-24 12:32:50] 2025-11-24 11:32:01,390 | INFO     | architecture information:
[2025-11-24 12:32:50] 2025-11-24 11:32:01,393 | INFO     | executing command: cat /etc/os-release
[2025-11-24 12:32:50] 2025-11-24 11:32:01,592 | INFO     | cat /etc/os-release:
[2025-11-24 12:32:50] NAME="CentOS Linux"
[2025-11-24 12:32:50] VERSION="7 (Core)"
[2025-11-24 12:32:50] ID="centos"
[2025-11-24 12:32:50] ID_LIKE="rhel fedora"
[2025-11-24 12:32:50] VERSION_ID="7"
[2025-11-24 12:32:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 12:32:50] ANSI_COLOR="0;31"
[2025-11-24 12:32:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 12:32:50] HOME_URL="https://www.centos.org/"
[2025-11-24 12:32:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 12:32:50] 
[2025-11-24 12:32:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 12:32:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 12:32:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 12:32:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 12:32:50] 
[2025-11-24 12:32:50] 2025-11-24 11:32:01,592 | INFO     | ***************************************
[2025-11-24 12:32:50] 2025-11-24 11:32:02,096 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-24 12:32:50] 2025-11-24 11:32:02,325 | INFO     | sufficient remaining disk space (495345205248 B)
[2025-11-24 12:32:50] 2025-11-24 11:32:02,326 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 12:32:50] 2025-11-24 11:32:02,326 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 12:32:50] 2025-11-24 11:32:02,326 | INFO     | update_server=False
[2025-11-24 12:32:50] 2025-11-24 11:32:02,326 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 12:32:50] 2025-11-24 11:32:02,327 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 12:32:50] 2025-11-24 11:32:02,331 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 12:32:50] 2025-11-24 11:32:02,678 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 12:32:50] 2025-11-24 11:32:02,679 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 12:32:50] 2025-11-24 11:32:02,679 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 12:32:50] 2025-11-24 11:32:02,679 | INFO     | will abort loop
[2025-11-24 12:32:50] 2025-11-24 11:32:02,795 | INFO     | all data control threads have been joined
[2025-11-24 12:32:50] 2025-11-24 11:32:03,090 | INFO     | all job control threads have been joined
[2025-11-24 12:32:50] 2025-11-24 11:32:03,336 | INFO     | [job] retrieve thread has finished
[2025-11-24 12:32:50] 2025-11-24 11:32:03,459 | INFO     | all payload control threads have been joined
[2025-11-24 12:32:50] 2025-11-24 11:32:03,685 | INFO     | [job] job monitor thread has finished
[2025-11-24 12:32:50] 2025-11-24 11:32:03,798 | INFO     | [job] validate thread has finished
[2025-11-24 12:32:50] 2025-11-24 11:32:03,801 | INFO     | [data] control thread has finished
[2025-11-24 12:32:50] 2025-11-24 11:32:03,878 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 12:32:50] 2025-11-24 11:32:04,096 | INFO     | [job] control thread has finished
[2025-11-24 12:32:50] 2025-11-24 11:32:04,125 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 12:32:50] 2025-11-24 11:32:04,339 | INFO     | [data] copytool_out thread has finished
[2025-11-24 12:32:50] 2025-11-24 11:32:04,380 | INFO     | [payload] failed_post thread has finished
[2025-11-24 12:32:50] 2025-11-24 11:32:04,421 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 12:32:50] 2025-11-24 11:32:04,439 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 12:32:50] 2025-11-24 11:32:04,465 | INFO     | [payload] control thread has finished
[2025-11-24 12:32:50] 2025-11-24 11:32:04,517 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 12:32:50] 2025-11-24 11:32:04,674 | INFO     | [payload] validate_post thread has finished
[2025-11-24 12:32:50] 2025-11-24 11:32:04,682 | INFO     | [data] copytool_in thread has finished
[2025-11-24 12:32:50] 2025-11-24 11:32:05,131 | INFO     | [job] queue monitor thread has finished
[2025-11-24 12:32:50] 2025-11-24 11:32:06,336 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 12:32:50] 2025-11-24 11:32:32,389 | INFO     | PID=6077 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-24 12:32:50] 2025-11-24 11:32:32,390 | INFO     | .. there are 9 such processes running
[2025-11-24 12:32:50] 2025-11-24 11:32:32,390 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 12:32:50] 2025-11-24 11:32:32,390 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 12:32:50] 2025-11-24 11:32:32,390 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 12:32:50] 2025-11-24 11:32:40,857 | INFO     | [monitor] cgroup control has ended
[2025-11-24 12:32:50] 2025-11-24 11:32:40,963 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140425222092608)>', '<ExcThread(monitor, started 140424509363968)>']
[2025-11-24 12:32:50] 2025-11-24 11:32:41,443 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 12:32:50] 2025-11-24 11:32:41,444 | INFO     | [monitor] control thread has ended
[2025-11-24 12:32:50] 2025-11-24 11:32:45,989 | INFO     | all workflow threads have been joined
[2025-11-24 12:32:50] 2025-11-24 11:32:45,990 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 12:32:50] 2025-11-24 11:32:45,990 | INFO     | traces error code: 0
[2025-11-24 12:32:50] 2025-11-24 11:32:45,990 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 12:32:50] 2025-11-24 11:32:46,188 [wrapper] ==== pilot stdout END ====
[2025-11-24 12:32:50] 2025-11-24 11:32:46,235 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 12:32:50] 2025-11-24 11:32:46,309 [wrapper] pilotpid: 6077
[2025-11-24 12:32:50] 2025-11-24 11:32:46,395 [wrapper] Pilot exit status: 0
[2025-11-24 12:32:50] 2025-11-24 11:32:46,820 [wrapper] pandaids: 6893839060
[2025-11-24 12:32:50] 2025-11-24 11:32:47,837 [wrapper] cleanup supervisor_pilot 23711 6078
[2025-11-24 12:32:50] 2025-11-24 11:32:47,840 [wrapper] Test setup, not cleaning
[2025-11-24 12:32:50] 2025-11-24 11:32:47,845 [wrapper] apfmon messages muted
[2025-11-24 12:32:50] 2025-11-24 11:32:47,848 [wrapper] ==== wrapper stdout END ====
[2025-11-24 12:32:50] 2025-11-24 11:32:47,851 [wrapper] ==== wrapper stderr END ====
[2025-11-24 12:32:50]  *** Error codes and diagnostics ***
[2025-11-24 12:32:50]     "exeErrorCode": 0,
[2025-11-24 12:32:50]     "exeErrorDiag": "",
[2025-11-24 12:32:50]     "pilotErrorCode": 0,
[2025-11-24 12:32:50]     "pilotErrorDiag": "",
[2025-11-24 12:32:50]  *** Listing of results directory ***
[2025-11-24 12:32:50] total 1340684
[2025-11-24 12:32:50] -rw-r--r--. 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-24 12:32:50] -rwx------. 1 boinc boinc     36292 Nov 20 11:18 runpilot2-wrapper.sh
[2025-11-24 12:32:50] -rw-r--r--. 1 boinc boinc      5112 Nov 20 11:19 queuedata.json
[2025-11-24 12:32:50] -rw-r--r--. 1 boinc boinc       100 Nov 23 14:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 12:32:50] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 14:34 run_atlas
[2025-11-24 12:32:50] -rw-r--r--. 1 boinc boinc       105 Nov 23 14:34 job.xml
[2025-11-24 12:32:50] -rw-r--r--. 1 boinc boinc      6391 Nov 23 14:34 init_data.xml
[2025-11-24 12:32:50] -rw-r--r--. 2 boinc boinc 411214281 Nov 23 14:34 EVNT.47493127._000143.pool.root.1
[2025-11-24 12:32:50] -rw-r--r--. 2 boinc boinc     15847 Nov 23 14:34 start_atlas.sh
[2025-11-24 12:32:50] drwxrwx--x. 2 boinc boinc        68 Nov 23 14:34 shared
[2025-11-24 12:32:50] -rw-r--r--. 2 boinc boinc    590100 Nov 23 14:34 input.tar.gz
[2025-11-24 12:32:50] -rw-r--r--. 1 boinc boinc         0 Nov 23 14:34 boinc_lockfile
[2025-11-24 12:32:50] -rw-r--r--. 1 boinc boinc      2786 Nov 23 14:34 pandaJob.out
[2025-11-24 12:32:50] -rw-------. 1 boinc boinc    989785 Nov 23 14:38 agis_schedconf.cvmfs.json
[2025-11-24 12:32:50] drwx------. 5 boinc boinc      4096 Nov 23 14:38 pilot3
[2025-11-24 12:32:50] -rw-r--r--. 1 boinc boinc       533 Nov 24 12:13 boinc_task_state.xml
[2025-11-24 12:32:50] -rw-------. 1 boinc boinc 932041823 Nov 24 12:29 HITS.47523449._001429.pool.root.1
[2025-11-24 12:32:50] -rw-------. 1 boinc boinc      1032 Nov 24 12:30 memory_monitor_summary.json
[2025-11-24 12:32:50] -rw-------. 1 boinc boinc   1516227 Nov 24 12:30 agis_ddmendpoints.agis.ALL.json
[2025-11-24 12:32:50] -rw-------. 1 boinc boinc   2403206 Nov 24 12:30 log.47523449._001429.job.log.tgz.1
[2025-11-24 12:32:50] -rw-------. 1 boinc boinc        95 Nov 24 12:31 pilot_heartbeat.json
[2025-11-24 12:32:50] -rw-------. 1 boinc boinc      8624 Nov 24 12:31 heartbeat.json
[2025-11-24 12:32:50] -rw-r--r--. 1 boinc boinc      8192 Nov 24 12:32 boinc_mmap_file
[2025-11-24 12:32:50] -rw-r--r--. 1 boinc boinc        29 Nov 24 12:32 wrapper_checkpoint.txt
[2025-11-24 12:32:50] -rw-------. 1 boinc boinc      5069 Nov 24 12:32 pilotlog.txt
[2025-11-24 12:32:50] -rw-------. 1 boinc boinc  10444108 Nov 24 12:32 log.47523449._001429.job.log.1
[2025-11-24 12:32:50] -rw-------. 1 boinc boinc       353 Nov 24 12:32 output.list
[2025-11-24 12:32:50] -rw-r--r--. 1 boinc boinc       620 Nov 24 12:32 runtime_log
[2025-11-24 12:32:50] -rw-------. 1 boinc boinc  12871680 Nov 24 12:32 result.tar.gz
[2025-11-24 12:32:50] -rw-r--r--. 1 boinc boinc      8817 Nov 24 12:32 runtime_log.err
[2025-11-24 12:32:50] -rw-------. 1 boinc boinc       662 Nov 24 12:32 M0pNDmZvGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmPNGKDmpxFnOn.diag
[2025-11-24 12:32:50] -rw-r--r--. 1 boinc boinc     21010 Nov 24 12:32 stderr.txt
[2025-11-24 12:32:50] HITS file was successfully produced:
[2025-11-24 12:32:50] -rw-------. 1 boinc boinc 932041823 Nov 24 12:29 shared/HITS.pool.root.1
[2025-11-24 12:32:50]  *** Contents of shared directory: ***
[2025-11-24 12:32:50] total 1324948
[2025-11-24 12:32:50] -rw-r--r--. 2 boinc boinc 411214281 Nov 23 14:34 ATLAS.root_0
[2025-11-24 12:32:50] -rw-r--r--. 2 boinc boinc     15847 Nov 23 14:34 start_atlas.sh
[2025-11-24 12:32:50] -rw-r--r--. 2 boinc boinc    590100 Nov 23 14:34 input.tar.gz
[2025-11-24 12:32:50] -rw-------. 1 boinc boinc 932041823 Nov 24 12:29 HITS.pool.root.1
[2025-11-24 12:32:50] -rw-------. 1 boinc boinc  12871680 Nov 24 12:32 result.tar.gz
12:32:52 (2288): run_atlas exited; CPU time 344433.106299
12:32:52 (2288): called boinc_finish(0)

</stderr_txt>
]]>

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