Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:54:13 (2427010): wrapper (7.7.26015): starting
08:54:13 (2427010): wrapper: running run_atlas (--nthreads 3)
[2025-11-23 08:54:13] Arguments: --nthreads 3
[2025-11-23 08:54:13] Threads: 3
[2025-11-23 08:54:13] Checking for CVMFS
[2025-11-23 08:54:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 08:54:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 08:54:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 08:54:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 08:54:13] 2.9.2.0 1559605 6486 85148 153201 3 81 36403321 36864000 0 130560 0 2383440 99.897 395887 6649 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-23 08:54:13] CVMFS is ok
[2025-11-23 08:54:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 08:54:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 08:54:13] Further information can be found at the LHC@home message board.
[2025-11-23 08:54:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 08:54:13] Checking for apptainer binary...
[2025-11-23 08:54:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 08:54:13] Running /usr/bin/apptainer --version
[2025-11-23 08:54:13] apptainer version 1.4.1-1.1
[2025-11-23 08:54:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 08:54:13] atlasA223
[2025-11-23 08:54:13] apptainer works
[2025-11-23 08:54:13] Set ATHENA_PROC_NUMBER=3
[2025-11-23 08:54:13] Set ATHENA_CORE_NUMBER=3
[2025-11-23 08:54:13] Starting ATLAS job with PandaID=6893837101
[2025-11-23 08:54:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 17:15:58]  *** The last 200 lines of the pilot log: ***
[2025-11-23 17:15:58] VERSION_ID="7"
[2025-11-23 17:15:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 17:15:58] ANSI_COLOR="0;31"
[2025-11-23 17:15:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 17:15:58] HOME_URL="https://www.centos.org/"
[2025-11-23 17:15:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 17:15:58] 
[2025-11-23 17:15:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 17:15:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 17:15:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 17:15:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 17:15:58] 
[2025-11-23 17:15:58] 2025-11-23 16:15:27,985 | INFO     | ***************************************
[2025-11-23 17:15:58] 2025-11-23 16:15:28,488 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-23 17:15:58] 2025-11-23 16:15:28,499 | INFO     | sufficient remaining disk space (365411958784 B)
[2025-11-23 17:15:58] 2025-11-23 16:15:28,500 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 17:15:58] 2025-11-23 16:15:28,500 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 17:15:58] 2025-11-23 16:15:28,500 | INFO     | update_server=False
[2025-11-23 17:15:58] 2025-11-23 16:15:28,500 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 17:15:58] 2025-11-23 16:15:28,500 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 17:15:58] 2025-11-23 16:15:28,500 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 17:15:58] 2025-11-23 16:15:28,500 | INFO     | aborting loop
[2025-11-23 17:15:58] 2025-11-23 16:15:28,500 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 17:15:58] 2025-11-23 16:15:28,987 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 17:15:58] 2025-11-23 16:15:29,131 | INFO     | all payload control threads have been joined
[2025-11-23 17:15:58] 2025-11-23 16:15:29,427 | INFO     | all job control threads have been joined
[2025-11-23 17:15:58] 2025-11-23 16:15:29,450 | INFO     | all data control threads have been joined
[2025-11-23 17:15:58] 2025-11-23 16:15:29,505 | INFO     | [job] retrieve thread has finished
[2025-11-23 17:15:58] 2025-11-23 16:15:29,506 | INFO     | [job] job monitor thread has finished
[2025-11-23 17:15:58] 2025-11-23 16:15:29,506 | INFO     | [job] queue monitor thread has finished
[2025-11-23 17:15:58] 2025-11-23 16:15:29,829 | INFO     | [payload] failed_post thread has finished
[2025-11-23 17:15:58] 2025-11-23 16:15:29,956 | INFO     | [data] copytool_in thread has finished
[2025-11-23 17:15:58] 2025-11-23 16:15:30,070 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 17:15:58] 2025-11-23 16:15:30,137 | INFO     | [payload] control thread has finished
[2025-11-23 17:15:58] 2025-11-23 16:15:30,376 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 17:15:58] 2025-11-23 16:15:30,433 | INFO     | [job] control thread has finished
[2025-11-23 17:15:58] 2025-11-23 16:15:30,441 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 17:15:58] 2025-11-23 16:15:30,455 | INFO     | [data] control thread has finished
[2025-11-23 17:15:58] 2025-11-23 16:15:30,506 | INFO     | [data] copytool_out thread has finished
[2025-11-23 17:15:58] 2025-11-23 16:15:30,600 | INFO     | [payload] validate_post thread has finished
[2025-11-23 17:15:58] 2025-11-23 16:15:30,640 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 17:15:58] 2025-11-23 16:15:30,773 | INFO     | [job] validate thread has finished
[2025-11-23 17:15:58] 2025-11-23 16:15:32,994 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 17:15:58] 2025-11-23 16:15:52,337 | INFO     | [monitor] cgroup control has ended
[2025-11-23 17:15:58] 2025-11-23 16:15:52,485 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140511523903296)>', '<ExcThread(monitor, started 140511029475072)>']
[2025-11-23 17:15:58] 2025-11-23 16:15:57,511 | INFO     | all workflow threads have been joined
[2025-11-23 17:15:58] 2025-11-23 16:15:57,511 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 17:15:58] 2025-11-23 16:15:57,511 | INFO     | traces error code: 0
[2025-11-23 17:15:58] 2025-11-23 16:15:57,511 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 17:15:58] 2025-11-23 16:15:58,726 | INFO     | PID=2430735 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 17:15:58] 2025-11-23 16:15:58,727 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 17:15:58] 2025-11-23 16:15:58,727 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 17:15:58] 2025-11-23 16:15:58,727 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 17:15:58] 2025-11-23 16:15:58,727 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 17:15:58] 2025-11-23 16:15:58,727 | INFO     | [monitor] control thread has ended
[2025-11-23 17:15:58] 2025-11-23 16:15:58,774 [wrapper] ==== pilot stdout END ====
[2025-11-23 17:15:58] 2025-11-23 16:15:58,777 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 17:15:58] 2025-11-23 16:15:58,779 [wrapper] pilotpid: 2430735
[2025-11-23 17:15:58] 2025-11-23 16:15:58,781 [wrapper] Pilot exit status: 0
[2025-11-23 17:15:58] 2025-11-23 16:15:58,789 [wrapper] pandaids: 6893837101
[2025-11-23 17:15:58] 2025-11-23 16:15:58,805 [wrapper] cleanup supervisor_pilot 2492829 2430736
[2025-11-23 17:15:58] 2025-11-23 16:15:58,808 [wrapper] Test setup, not cleaning
[2025-11-23 17:15:58] 2025-11-23 16:15:58,810 [wrapper] apfmon messages muted
[2025-11-23 17:15:58] 2025-11-23 16:15:58,812 [wrapper] ==== wrapper stdout END ====
[2025-11-23 17:15:58] 2025-11-23 16:15:58,815 [wrapper] ==== wrapper stderr END ====
[2025-11-23 17:15:58]  *** Error codes and diagnostics ***
[2025-11-23 17:15:58]     "exeErrorCode": 0,
[2025-11-23 17:15:58]     "exeErrorDiag": "",
[2025-11-23 17:15:58]     "pilotErrorCode": 0,
[2025-11-23 17:15:58]     "pilotErrorDiag": "",
[2025-11-23 17:15:58]  *** Listing of results directory ***
[2025-11-23 17:15:58] total 1311464
[2025-11-23 17:15:58] -rw-r--r-- 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-23 17:15:58] -rw-r--r-- 1 boinc boinc      5112 Nov 20 11:17 queuedata.json
[2025-11-23 17:15:58] -rwx------ 1 boinc boinc     36292 Nov 20 11:18 runpilot2-wrapper.sh
[2025-11-23 17:15:58] -rw-r--r-- 1 boinc boinc       100 Nov 23 08:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 17:15:58] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 08:54 run_atlas
[2025-11-23 17:15:58] -rw-r--r-- 1 boinc boinc       105 Nov 23 08:54 job.xml
[2025-11-23 17:15:58] -rw-r--r-- 2 boinc boinc 411210800 Nov 23 08:54 EVNT.47493127._000114.pool.root.1
[2025-11-23 17:15:58] -rw-r--r-- 2 boinc boinc    590100 Nov 23 08:54 input.tar.gz
[2025-11-23 17:15:58] -rw-r--r-- 2 boinc boinc     15847 Nov 23 08:54 start_atlas.sh
[2025-11-23 17:15:58] drwxrwx--x 2 boinc boinc      4096 Nov 23 08:54 shared
[2025-11-23 17:15:58] -rw-r--r-- 1 boinc boinc         0 Nov 23 08:54 boinc_setup_complete
[2025-11-23 17:15:58] -rw-r--r-- 1 boinc boinc      6446 Nov 23 08:54 init_data.xml
[2025-11-23 17:15:58] -rw-r--r-- 1 boinc boinc         0 Nov 23 08:54 boinc_lockfile
[2025-11-23 17:15:58] -rw-r--r-- 1 boinc boinc      2786 Nov 23 08:54 pandaJob.out
[2025-11-23 17:15:58] -rw------- 1 boinc boinc    989784 Nov 23 08:54 agis_schedconf.cvmfs.json
[2025-11-23 17:15:58] drwx------ 5 boinc boinc      4096 Nov 23 08:54 pilot3
[2025-11-23 17:15:58] -rw-r--r-- 1 boinc boinc       531 Nov 23 17:12 boinc_task_state.xml
[2025-11-23 17:15:58] -rw------- 1 boinc boinc 917027152 Nov 23 17:15 HITS.47523449._001133.pool.root.1
[2025-11-23 17:15:58] -rw------- 1 boinc boinc      1022 Nov 23 17:15 memory_monitor_summary.json
[2025-11-23 17:15:58] -rw------- 1 boinc boinc   1526164 Nov 23 17:15 agis_ddmendpoints.agis.ALL.json
[2025-11-23 17:15:58] -rw------- 1 boinc boinc   1171247 Nov 23 17:15 log.47523449._001133.job.log.tgz.1
[2025-11-23 17:15:58] -rw------- 1 boinc boinc      8566 Nov 23 17:15 heartbeat.json
[2025-11-23 17:15:58] -rw-r--r-- 1 boinc boinc      8192 Nov 23 17:15 boinc_mmap_file
[2025-11-23 17:15:58] -rw-r--r-- 1 boinc boinc        28 Nov 23 17:15 wrapper_checkpoint.txt
[2025-11-23 17:15:58] -rw------- 1 boinc boinc       747 Nov 23 17:15 pilotlog.txt
[2025-11-23 17:15:58] -rw------- 1 boinc boinc        95 Nov 23 17:15 pilot_heartbeat.json
[2025-11-23 17:15:58] -rw------- 1 boinc boinc   4229441 Nov 23 17:15 log.47523449._001133.job.log.1
[2025-11-23 17:15:58] -rw------- 1 boinc boinc       353 Nov 23 17:15 output.list
[2025-11-23 17:15:58] -rw-r--r-- 1 boinc boinc       620 Nov 23 17:15 runtime_log
[2025-11-23 17:15:58] -rw------- 1 boinc boinc   5416960 Nov 23 17:15 result.tar.gz
[2025-11-23 17:15:58] -rw------- 1 boinc boinc       668 Nov 23 17:15 vKmKDm3uGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmGJHKDmlj7AWo.diag
[2025-11-23 17:15:58] -rw-r--r-- 1 boinc boinc      8913 Nov 23 17:15 runtime_log.err
[2025-11-23 17:15:58] -rw-r--r-- 1 boinc boinc      8549 Nov 23 17:15 stderr.txt
[2025-11-23 17:15:58] HITS file was successfully produced:
[2025-11-23 17:15:58] -rw------- 1 boinc boinc 917027152 Nov 23 17:15 shared/HITS.pool.root.1
[2025-11-23 17:15:58]  *** Contents of shared directory: ***
[2025-11-23 17:15:58] total 1303004
[2025-11-23 17:15:58] -rw-r--r-- 2 boinc boinc 411210800 Nov 23 08:54 ATLAS.root_0
[2025-11-23 17:15:58] -rw-r--r-- 2 boinc boinc    590100 Nov 23 08:54 input.tar.gz
[2025-11-23 17:15:58] -rw-r--r-- 2 boinc boinc     15847 Nov 23 08:54 start_atlas.sh
[2025-11-23 17:15:58] -rw------- 1 boinc boinc 917027152 Nov 23 17:15 HITS.pool.root.1
[2025-11-23 17:15:58] -rw------- 1 boinc boinc   5416960 Nov 23 17:15 result.tar.gz
17:15:59 (2427010): run_atlas exited; CPU time 88908.942216
17:15:59 (2427010): called boinc_finish(0)

</stderr_txt>
]]>

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