Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:40:16 (1415191): wrapper (7.7.26015): starting
22:40:16 (1415191): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 22:40:16] Arguments: --nthreads 8
[2025-11-20 22:40:16] Threads: 8
[2025-11-20 22:40:16] Checking for CVMFS
[2025-11-20 22:40:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 22:40:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 22:40:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 22:40:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 22:40:18] 2.13.2.0 5784 25148 172908 153106 0 73 31747281 39288832 5714 16776704 0 12800426 99.666 9690601 33592 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 22:40:18] CVMFS is ok
[2025-11-20 22:40:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 22:40:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 22:40:18] Further information can be found at the LHC@home message board.
[2025-11-20 22:40:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 22:40:18] Checking for apptainer binary...
[2025-11-20 22:40:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 22:40:18] Running /usr/bin/apptainer --version
[2025-11-20 22:40:19] apptainer version 1.4.4-1.el9
[2025-11-20 22:40:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 22:40:20] c-210-12.aglt2.org
[2025-11-20 22:40:20] apptainer works
[2025-11-20 22:40:21] Set ATHENA_PROC_NUMBER=8
[2025-11-20 22:40:21] Set ATHENA_CORE_NUMBER=8
[2025-11-20 22:40:21] Starting ATLAS job with PandaID=6893838316
[2025-11-20 22:40:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 12:09:44]  *** The last 200 lines of the pilot log: ***
[2025-11-21 12:09:44] 2025-11-21 17:09:04,114 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 12:09:44] 2025-11-21 17:09:04,114 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 12:09:44] 2025-11-21 17:09:04,138 | INFO     | fitting pss+swap vs Time
[2025-11-21 12:09:44] 2025-11-21 17:09:04,143 | INFO     | sum of square deviations: 154624926277.4601
[2025-11-21 12:09:44] 2025-11-21 17:09:04,175 | INFO     | sum of deviations: 1414368035060.021
[2025-11-21 12:09:44] 2025-11-21 17:09:04,175 | INFO     | mean x: 1763720746.6166456
[2025-11-21 12:09:44] 2025-11-21 17:09:04,176 | INFO     | mean y: 2879378.210592686
[2025-11-21 12:09:44] 2025-11-21 17:09:04,176 | INFO     | intersect: -16130032092.418268
[2025-11-21 12:09:44] 2025-11-21 17:09:04,177 | INFO     | chi2: 11.860108405186153
[2025-11-21 12:09:44] 2025-11-21 17:09:04,182 | INFO     | sum of square deviations: 151718546505.5471
[2025-11-21 12:09:44] 2025-11-21 17:09:04,217 | INFO     | sum of deviations: 1703461595867.0107
[2025-11-21 12:09:44] 2025-11-21 17:09:04,217 | INFO     | mean x: 1763720594.1205583
[2025-11-21 12:09:44] 2025-11-21 17:09:04,217 | INFO     | mean y: 2894547.968274112
[2025-11-21 12:09:44] 2025-11-21 17:09:04,218 | INFO     | intersect: -19799762194.55642
[2025-11-21 12:09:44] 2025-11-21 17:09:04,219 | INFO     | chi2: 8.09142535510229
[2025-11-21 12:09:44] 2025-11-21 17:09:04,219 | INFO     | current chi2=8.09142535510229 (change=31.776126501810936 %)
[2025-11-21 12:09:44] 2025-11-21 17:09:04,221 | INFO     | sum of square deviations: 148848818583.60913
[2025-11-21 12:09:44] 2025-11-21 17:09:04,248 | INFO     | sum of deviations: 1971240194401.175
[2025-11-21 12:09:44] 2025-11-21 17:09:04,249 | INFO     | mean x: 1763720441.624521
[2025-11-21 12:09:44] 2025-11-21 17:09:04,259 | INFO     | mean y: 2908766.803320562
[2025-11-21 12:09:44] 2025-11-21 17:09:04,259 | INFO     | intersect: -23354459194.195023
[2025-11-21 12:09:44] 2025-11-21 17:09:04,260 | INFO     | chi2: 4.734479290368011
[2025-11-21 12:09:44] 2025-11-21 17:09:04,260 | INFO     | current chi2=4.734479290368011 (change=41.487697376055706 %)
[2025-11-21 12:09:44] 2025-11-21 17:09:04,261 | INFO     | sum of square deviations: 146015462064.40213
[2025-11-21 12:09:44] 2025-11-21 17:09:04,318 | INFO     | sum of deviations: 1985931137038.0166
[2025-11-21 12:09:44] 2025-11-21 17:09:04,321 | INFO     | mean x: 1763720289.1272492
[2025-11-21 12:09:44] 2025-11-21 17:09:04,321 | INFO     | mean y: 2909549.7776349615
[2025-11-21 12:09:44] 2025-11-21 17:09:04,321 | INFO     | intersect: -23985146164.887814
[2025-11-21 12:09:44] 2025-11-21 17:09:04,322 | INFO     | chi2: 4.590671349021366
[2025-11-21 12:09:44] 2025-11-21 17:09:04,323 | INFO     | current chi2=4.590671349021366 (change=3.037460563809261 %)
[2025-11-21 12:09:44] 2025-11-21 17:09:04,323 | INFO     | right removable region: 777
[2025-11-21 12:09:44] 2025-11-21 17:09:04,324 | INFO     | sum of square deviations: 151718248215.54718
[2025-11-21 12:09:44] 2025-11-21 17:09:04,360 | INFO     | sum of deviations: 1115823349812.149
[2025-11-21 12:09:44] 2025-11-21 17:09:04,360 | INFO     | mean x: 1763720899.1205583
[2025-11-21 12:09:44] 2025-11-21 17:09:04,360 | INFO     | mean y: 2895036.9352791877
[2025-11-21 12:09:44] 2025-11-21 17:09:04,360 | INFO     | intersect: -12968523925.103115
[2025-11-21 12:09:44] 2025-11-21 17:09:04,362 | INFO     | chi2: 8.273281924519244
[2025-11-21 12:09:44] 2025-11-21 17:09:04,362 | INFO     | current chi2=8.273281924519244 (change=30.24277989818771 %)
[2025-11-21 12:09:44] 2025-11-21 17:09:04,363 | INFO     | sum of square deviations: 148848222003.60913
[2025-11-21 12:09:44] 2025-11-21 17:09:04,398 | INFO     | sum of deviations: 980009903415.665
[2025-11-21 12:09:44] 2025-11-21 17:09:04,398 | INFO     | mean x: 1763721051.624521
[2025-11-21 12:09:44] 2025-11-21 17:09:04,398 | INFO     | mean y: 2902241.1008939976
[2025-11-21 12:09:44] 2025-11-21 17:09:04,398 | INFO     | intersect: -11609356704.207916
[2025-11-21 12:09:44] 2025-11-21 17:09:04,399 | INFO     | chi2: 7.4872487737445805
[2025-11-21 12:09:44] 2025-11-21 17:09:04,400 | INFO     | current chi2=7.4872487737445805 (change=9.500862631613264 %)
[2025-11-21 12:09:44] 2025-11-21 17:09:04,400 | INFO     | left removable region: 20
[2025-11-21 12:09:44] 2025-11-21 17:09:04,401 | INFO     | sum of square deviations: 134507339392.43307
[2025-11-21 12:09:44] 2025-11-21 17:09:04,430 | INFO     | sum of deviations: 1466974557448.658
[2025-11-21 12:09:44] 2025-11-21 17:09:04,431 | INFO     | mean x: 1763720868.6301188
[2025-11-21 12:09:44] 2025-11-21 17:09:04,431 | INFO     | mean y: 2937542.927344782
[2025-11-21 12:09:44] 2025-11-21 17:09:04,431 | INFO     | intersect: -19232694151.287743
[2025-11-21 12:09:44] 2025-11-21 17:09:04,436 | INFO     | chi2: 0.07056994149521477
[2025-11-21 12:09:44] 2025-11-21 17:09:04,436 | INFO     | current memory leak: 10.91 B/s (using 757 data points, chi2=0.07)
[2025-11-21 12:09:44] 2025-11-21 17:09:04,437 | INFO     | could have reported an average CPU frequency of 2600 MHz (30 samples)
[2025-11-21 12:09:44] 2025-11-21 17:09:04,437 | INFO     | ..............................
[2025-11-21 12:09:44] 2025-11-21 17:09:04,437 | INFO     | . Timing measurements:
[2025-11-21 12:09:44] 2025-11-21 17:09:04,438 | INFO     | . get job = 0 s
[2025-11-21 12:09:44] 2025-11-21 17:09:04,438 | INFO     | . initial setup = 5 s
[2025-11-21 12:09:44] 2025-11-21 17:09:04,438 | INFO     | . payload setup = 39 s
[2025-11-21 12:09:44] 2025-11-21 17:09:04,438 | INFO     | . stage-in = 0 s
[2025-11-21 12:09:44] 2025-11-21 17:09:04,438 | INFO     | . payload execution = 48358 s
[2025-11-21 12:09:44] 2025-11-21 17:09:04,438 | INFO     | . stage-out = 4 s
[2025-11-21 12:09:44] 2025-11-21 17:09:04,438 | INFO     | . log creation = 1 s
[2025-11-21 12:09:44] 2025-11-21 17:09:04,438 | INFO     | ..............................
[2025-11-21 12:09:44] 2025-11-21 17:09:04,655 | INFO     | 
[2025-11-21 12:09:44] 2025-11-21 17:09:04,655 | INFO     | job summary report
[2025-11-21 12:09:44] 2025-11-21 17:09:04,655 | INFO     | --------------------------------------------------
[2025-11-21 12:09:44] 2025-11-21 17:09:04,656 | INFO     | PanDA job id: 6893838316
[2025-11-21 12:09:44] 2025-11-21 17:09:04,656 | INFO     | task id: 47523449
[2025-11-21 12:09:44] 2025-11-21 17:09:04,656 | INFO     | errors: (none)
[2025-11-21 12:09:44] 2025-11-21 17:09:04,656 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 12:09:44] 2025-11-21 17:09:04,656 | INFO     | pilot state: finished 
[2025-11-21 12:09:44] 2025-11-21 17:09:04,656 | INFO     | transexitcode: 0
[2025-11-21 12:09:44] 2025-11-21 17:09:04,656 | INFO     | exeerrorcode: 0
[2025-11-21 12:09:44] 2025-11-21 17:09:04,656 | INFO     | exeerrordiag: 
[2025-11-21 12:09:44] 2025-11-21 17:09:04,656 | INFO     | exitcode: 0
[2025-11-21 12:09:44] 2025-11-21 17:09:04,657 | INFO     | exitmsg: OK
[2025-11-21 12:09:44] 2025-11-21 17:09:04,657 | INFO     | cpuconsumptiontime: 285993 s
[2025-11-21 12:09:44] 2025-11-21 17:09:04,657 | INFO     | nevents: 1000
[2025-11-21 12:09:44] 2025-11-21 17:09:04,657 | INFO     | neventsw: 0
[2025-11-21 12:09:44] 2025-11-21 17:09:04,657 | INFO     | pid: 1427036
[2025-11-21 12:09:44] 2025-11-21 17:09:04,657 | INFO     | pgrp: 1427036
[2025-11-21 12:09:44] 2025-11-21 17:09:04,657 | INFO     | corecount: 8
[2025-11-21 12:09:44] 2025-11-21 17:09:04,657 | INFO     | event service: False
[2025-11-21 12:09:44] 2025-11-21 17:09:04,657 | INFO     | sizes: {0: 2298636, 1: 2298835, 12: 2298835, 23: 2299153, 48401: 2346935, 48406: 2355929, 48408: 2356113, 48419: 2356359}
[2025-11-21 12:09:44] 2025-11-21 17:09:04,657 | INFO     | --------------------------------------------------
[2025-11-21 12:09:44] 2025-11-21 17:09:04,658 | INFO     | 
[2025-11-21 12:09:44] 2025-11-21 17:09:04,658 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-21 12:09:44] 2025-11-21 17:09:04,752 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 12:09:44] 2025-11-21 17:09:04,752 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 12:09:44] 2025-11-21 17:09:04,753 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 12:09:44] 2025-11-21 17:09:04,753 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 12:09:44] 2025-11-21 17:09:04,753 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 12:09:44] 2025-11-21 17:09:04,753 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 12:09:44] 2025-11-21 17:09:04,753 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 12:09:44] 2025-11-21 17:09:04,753 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 12:09:44] 2025-11-21 17:09:04,753 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 12:09:44] 2025-11-21 17:09:04,753 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 12:09:44] 2025-11-21 17:09:04,754 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 12:09:44] 2025-11-21 17:09:04,754 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 12:09:44] 2025-11-21 17:09:04,754 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 12:09:44] 2025-11-21 17:09:04,754 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 12:09:44] 2025-11-21 17:09:04,754 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 12:09:44] 2025-11-21 17:09:04,754 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 12:09:44] 2025-11-21 17:09:04,754 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 12:09:44] 2025-11-21 17:09:04,754 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 12:09:44] 2025-11-21 17:09:04,755 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 12:09:44] 2025-11-21 17:09:04,755 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 12:09:44] 2025-11-21 17:09:04,755 | INFO     | job 6893838316 has completed (purged errors)
[2025-11-21 12:09:44] 2025-11-21 17:09:04,755 | INFO     | overall cleanup function is called
[2025-11-21 12:09:44] 2025-11-21 17:09:05,784 | INFO     | --- collectZombieJob: --- 10, [1427036]
[2025-11-21 12:09:44] 2025-11-21 17:09:05,784 | INFO     | zombie collector waiting for pid 1427036
[2025-11-21 12:09:44] 2025-11-21 17:09:05,784 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 12:09:44] 2025-11-21 17:09:05,784 | INFO     | collected zombie processes
[2025-11-21 12:09:44] 2025-11-21 17:09:05,784 | INFO     | will attempt to kill all subprocesses of pid=1427036
[2025-11-21 12:09:44] 2025-11-21 17:09:06,070 | INFO     | process IDs to be killed: [1427036] (in reverse order)
[2025-11-21 12:09:44] 2025-11-21 17:09:06,161 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 12:09:44] 2025-11-21 17:09:06,161 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 12:09:44] 2025-11-21 17:09:06,179 | INFO     | did not find any defunct processes belonging to 1427036
[2025-11-21 12:09:44] 2025-11-21 17:09:06,195 | INFO     | did not find any defunct processes belonging to 1427036
[2025-11-21 12:09:44] 2025-11-21 17:09:06,200 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 12:09:44] 2025-11-21 17:09:06,200 | INFO     | ready for new job
[2025-11-21 12:09:44] 2025-11-21 17:09:06,200 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 12:09:44] 2025-11-21 17:09:06,208 | INFO     | ***************************************
[2025-11-21 12:09:44] 2025-11-21 17:09:06,208 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 12:09:44] 2025-11-21 17:09:06,208 | INFO     | ***************************************
[2025-11-21 12:09:44] 2025-11-21 17:09:06,208 | INFO     | 
[2025-11-21 12:09:44] 2025-11-21 17:09:06,210 | INFO     | architecture information:
[2025-11-21 12:09:44] 2025-11-21 17:09:06,211 | INFO     | executing command: cat /etc/os-release
[2025-11-21 12:09:44] 2025-11-21 17:09:06,252 | INFO     | cat /etc/os-release:
[2025-11-21 12:09:44] NAME="CentOS Linux"
[2025-11-21 12:09:44] VERSION="7 (Core)"
[2025-11-21 12:09:44] ID="centos"
[2025-11-21 12:09:44] ID_LIKE="rhel fedora"
[2025-11-21 12:09:44] VERSION_ID="7"
[2025-11-21 12:09:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 12:09:44] ANSI_COLOR="0;31"
[2025-11-21 12:09:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 12:09:44] HOME_URL="https://www.centos.org/"
[2025-11-21 12:09:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 12:09:44] 
[2025-11-21 12:09:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 12:09:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 12:09:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 12:09:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 12:09:44] 
[2025-11-21 12:09:44] 2025-11-21 17:09:06,252 | INFO     | ***************************************
[2025-11-21 12:09:44] 2025-11-21 17:09:06,756 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-21 12:09:44] 2025-11-21 17:09:06,771 | INFO     | sufficient remaining disk space (46904901632 B)
[2025-11-21 12:09:44] 2025-11-21 17:09:06,772 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 12:09:44] 2025-11-21 17:09:06,772 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 12:09:44] 2025-11-21 17:09:06,772 | INFO     | update_server=False
[2025-11-21 12:09:44] 2025-11-21 17:09:06,772 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 12:09:44] 2025-11-21 17:09:06,773 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 12:09:44] 2025-11-21 17:09:06,773 | INFO     | aborting loop
[2025-11-21 12:09:44] 2025-11-21 17:09:06,878 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 12:09:44] 2025-11-21 17:09:07,144 | INFO     | all data control threads have been joined
[2025-11-21 12:09:44] 2025-11-21 17:09:07,591 | INFO     | all payload control threads have been joined
[2025-11-21 12:09:44] 2025-11-21 17:09:07,777 | INFO     | [job] retrieve thread has finished
[2025-11-21 12:09:44] 2025-11-21 17:09:07,781 | INFO     | [job] job monitor thread has finished
[2025-11-21 12:09:44] 2025-11-21 17:09:07,906 | INFO     | [job] validate thread has finished
[2025-11-21 12:09:44] 2025-11-21 17:09:08,043 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 12:09:44] 2025-11-21 17:09:08,082 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 12:09:44] 2025-11-21 17:09:08,150 | INFO     | [data] control thread has finished
[2025-11-21 12:09:44] 2025-11-21 17:09:08,177 | INFO     | [payload] validate_post thread has finished
[2025-11-21 12:09:44] 2025-11-21 17:09:08,180 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 12:09:44] 2025-11-21 17:09:08,257 | INFO     | all job control threads have been joined
[2025-11-21 12:09:44] 2025-11-21 17:09:08,431 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 12:09:44] 2025-11-21 17:09:08,450 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 12:09:44] 2025-11-21 17:09:08,550 | INFO     | [payload] failed_post thread has finished
[2025-11-21 12:09:44] 2025-11-21 17:09:08,581 | INFO     | [data] copytool_in thread has finished
[2025-11-21 12:09:44] 2025-11-21 17:09:08,597 | INFO     | [payload] control thread has finished
[2025-11-21 12:09:44] 2025-11-21 17:09:08,888 | INFO     | [data] copytool_out thread has finished
[2025-11-21 12:09:44] 2025-11-21 17:09:09,263 | INFO     | [job] control thread has finished
[2025-11-21 12:09:44] 2025-11-21 17:09:09,672 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 12:09:44] 2025-11-21 17:09:10,678 | INFO     | [job] queue monitor thread has finished
[2025-11-21 12:09:44] 2025-11-21 17:09:12,189 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 12:09:44] 2025-11-21 17:09:35,925 | INFO     | [monitor] cgroup control has ended
[2025-11-21 12:09:44] 2025-11-21 17:09:37,757 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140032626349888)>', '<ExcThread(monitor, started 140032283232000)>']
[2025-11-21 12:09:44] 2025-11-21 17:09:37,824 | INFO     | PID=1419308 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 12:09:44] 2025-11-21 17:09:37,825 | INFO     | .. there are 10 such processes running
[2025-11-21 12:09:44] 2025-11-21 17:09:37,826 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 12:09:44] 2025-11-21 17:09:37,826 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 12:09:44] 2025-11-21 17:09:37,826 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 12:09:44] 2025-11-21 17:09:37,826 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 12:09:44] 2025-11-21 17:09:37,826 | INFO     | [monitor] control thread has ended
[2025-11-21 12:09:44] 2025-11-21 17:09:42,783 | INFO     | all workflow threads have been joined
[2025-11-21 12:09:44] 2025-11-21 17:09:42,783 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 12:09:44] 2025-11-21 17:09:42,784 | INFO     | traces error code: 0
[2025-11-21 12:09:44] 2025-11-21 17:09:42,784 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 12:09:44] 2025-11-21 17:09:43,142 [wrapper] ==== pilot stdout END ====
[2025-11-21 12:09:44] 2025-11-21 17:09:43,161 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 12:09:44] 2025-11-21 17:09:43,184 [wrapper] pilotpid: 1419308
[2025-11-21 12:09:44] 2025-11-21 17:09:43,201 [wrapper] Pilot exit status: 0
[2025-11-21 12:09:44] 2025-11-21 17:09:43,285 [wrapper] pandaids: 6893838316
[2025-11-21 12:09:44] 2025-11-21 17:09:43,771 [wrapper] cleanup supervisor_pilot 2543360 1419309
[2025-11-21 12:09:44] 2025-11-21 17:09:43,784 [wrapper] Test setup, not cleaning
[2025-11-21 12:09:44] 2025-11-21 17:09:43,799 [wrapper] apfmon messages muted
[2025-11-21 12:09:44] 2025-11-21 17:09:43,840 [wrapper] ==== wrapper stdout END ====
[2025-11-21 12:09:44] 2025-11-21 17:09:43,892 [wrapper] ==== wrapper stderr END ====
[2025-11-21 12:09:44]  *** Error codes and diagnostics ***
[2025-11-21 12:09:44]     "exeErrorCode": 0,
[2025-11-21 12:09:44]     "exeErrorDiag": "",
[2025-11-21 12:09:44]     "pilotErrorCode": 0,
[2025-11-21 12:09:44]     "pilotErrorDiag": "",
[2025-11-21 12:09:44]  *** Listing of results directory ***
[2025-11-21 12:09:44] total 1309620
[2025-11-21 12:09:44] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-21 12:09:44] -rwx------. 1 boincer umatlas     36292 Nov 20 05:17 runpilot2-wrapper.sh
[2025-11-21 12:09:44] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 05:17 queuedata.json
[2025-11-21 12:09:44] -rw-r--r--. 1 boincer umatlas       100 Nov 20 22:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 12:09:44] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 20 22:40 run_atlas
[2025-11-21 12:09:44] -rw-r--r--. 1 boincer umatlas       105 Nov 20 22:40 job.xml
[2025-11-21 12:09:44] -rw-r--r--. 2 boincer umatlas 408853031 Nov 20 22:40 EVNT.47493127._000130.pool.root.1
[2025-11-21 12:09:44] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 22:40 start_atlas.sh
[2025-11-21 12:09:44] drwxrwx--x. 2 boincer umatlas      4096 Nov 20 22:40 shared
[2025-11-21 12:09:44] -rw-r--r--. 2 boincer umatlas    590102 Nov 20 22:40 input.tar.gz
[2025-11-21 12:09:44] -rw-r--r--. 1 boincer umatlas         0 Nov 20 22:40 boinc_lockfile
[2025-11-21 12:09:44] -rw-r--r--. 1 boincer umatlas      2786 Nov 20 22:40 pandaJob.out
[2025-11-21 12:09:44] -rw-------. 1 boincer umatlas        57 Nov 20 22:40 setup.sh.local
[2025-11-21 12:09:44] -rw-------. 1 boincer umatlas    989817 Nov 20 22:41 agis_schedconf.cvmfs.json
[2025-11-21 12:09:44] drwx------. 5 boincer umatlas      4096 Nov 20 22:41 pilot3
[2025-11-21 12:09:44] -rw-r--r--. 1 boincer umatlas       533 Nov 21 11:55 boinc_task_state.xml
[2025-11-21 12:09:44] -rw-r--r--. 1 boincer umatlas      6663 Nov 21 12:03 init_data.xml
[2025-11-21 12:09:44] -rw-------. 1 boincer umatlas 910821542 Nov 21 12:08 HITS.47523449._001297.pool.root.1
[2025-11-21 12:09:44] -rw-------. 1 boincer umatlas      1052 Nov 21 12:08 memory_monitor_summary.json
[2025-11-21 12:09:44] -rw-------. 1 boincer umatlas   1526164 Nov 21 12:08 agis_ddmendpoints.agis.ALL.json
[2025-11-21 12:09:44] -rw-------. 1 boincer umatlas   2028272 Nov 21 12:08 log.47523449._001297.job.log.tgz.1
[2025-11-21 12:09:44] -rw-------. 1 boincer umatlas      8621 Nov 21 12:09 heartbeat.json
[2025-11-21 12:09:44] -rw-------. 1 boincer umatlas        95 Nov 21 12:09 pilot_heartbeat.json
[2025-11-21 12:09:44] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 12:09 boinc_mmap_file
[2025-11-21 12:09:44] -rw-r--r--. 1 boincer umatlas        29 Nov 21 12:09 wrapper_checkpoint.txt
[2025-11-21 12:09:44] -rw-------. 1 boincer umatlas      4824 Nov 21 12:09 pilotlog.txt
[2025-11-21 12:09:44] -rw-------. 1 boincer umatlas   6701051 Nov 21 12:09 log.47523449._001297.job.log.1
[2025-11-21 12:09:44] -rw-------. 1 boincer umatlas       353 Nov 21 12:09 output.list
[2025-11-21 12:09:44] -rw-r--r--. 1 boincer umatlas       620 Nov 21 12:09 runtime_log
[2025-11-21 12:09:44] -rw-------. 1 boincer umatlas   8744960 Nov 21 12:09 result.tar.gz
[2025-11-21 12:09:44] -rw-r--r--. 1 boincer umatlas      9343 Nov 21 12:09 runtime_log.err
[2025-11-21 12:09:44] -rw-------. 1 boincer umatlas       661 Nov 21 12:09 0PqKDmhuGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHKGKDm4JbZGm.diag
[2025-11-21 12:09:44] -rw-r--r--. 1 boincer umatlas     21129 Nov 21 12:09 stderr.txt
[2025-11-21 12:09:44] HITS file was successfully produced:
[2025-11-21 12:09:44] -rw-------. 1 boincer umatlas 910821542 Nov 21 12:08 shared/HITS.pool.root.1
[2025-11-21 12:09:44]  *** Contents of shared directory: ***
[2025-11-21 12:09:44] total 1297888
[2025-11-21 12:09:44] -rw-r--r--. 2 boincer umatlas 408853031 Nov 20 22:40 ATLAS.root_0
[2025-11-21 12:09:44] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 22:40 start_atlas.sh
[2025-11-21 12:09:44] -rw-r--r--. 2 boincer umatlas    590102 Nov 20 22:40 input.tar.gz
[2025-11-21 12:09:44] -rw-------. 1 boincer umatlas 910821542 Nov 21 12:08 HITS.pool.root.1
[2025-11-21 12:09:44] -rw-------. 1 boincer umatlas   8744960 Nov 21 12:09 result.tar.gz
12:09:46 (1415191): run_atlas exited; CPU time 286820.414722
12:09:46 (1415191): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN