Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:18:16 (8189): wrapper (7.7.26015): starting
23:18:16 (8189): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 23:18:16] Arguments: --nthreads 8
[2025-11-22 23:18:16] Threads: 8
[2025-11-22 23:18:16] Checking for CVMFS
[2025-11-22 23:18:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 23:18:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 23:18:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 23:18:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 23:18:19] 2.11.2.0 30743 76526 110892 153187 1 52 15011543 25165825 4415 130560 2 22148177 99.859 13181674 2021 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-22 23:18:19] CVMFS is ok
[2025-11-22 23:18:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 23:18:19] Checking for apptainer binary...
[2025-11-22 23:18:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 23:18:19] Running /usr/bin/apptainer --version
[2025-11-22 23:18:19] apptainer version 1.3.2-1.el7
[2025-11-22 23:18:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 23:18:40] cg-vwn349.simple-grid.lan
[2025-11-22 23:18:40] apptainer works
[2025-11-22 23:18:40] Set ATHENA_PROC_NUMBER=8
[2025-11-22 23:18:40] Set ATHENA_CORE_NUMBER=8
[2025-11-22 23:18:40] Starting ATLAS job with PandaID=6893838777
[2025-11-22 23:18:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 01:34:12]  *** The last 200 lines of the pilot log: ***
[2025-11-24 01:34:12] 2025-11-24 00:33:24,103 | INFO     | time since job start (94282s) is within the limit (172800.0s)
[2025-11-24 01:34:12] 2025-11-24 00:33:25,940 | INFO     | monitor loop #6349: job 0:6893838777 is in state 'finished'
[2025-11-24 01:34:12] 2025-11-24 00:33:25,940 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:34:12] 2025-11-24 00:33:26,112 | INFO     | time since job start (94284s) is within the limit (172800.0s)
[2025-11-24 01:34:12] 2025-11-24 00:33:28,121 | INFO     | time since job start (94286s) is within the limit (172800.0s)
[2025-11-24 01:34:12] 2025-11-24 00:33:28,446 | INFO     | monitor loop #6350: job 0:6893838777 is in state 'finished'
[2025-11-24 01:34:12] 2025-11-24 00:33:28,446 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:34:12] 2025-11-24 00:33:30,128 | INFO     | time since job start (94288s) is within the limit (172800.0s)
[2025-11-24 01:34:12] 2025-11-24 00:33:30,961 | INFO     | monitor loop #6351: job 0:6893838777 is in state 'finished'
[2025-11-24 01:34:12] 2025-11-24 00:33:30,961 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:34:12] 2025-11-24 00:33:31,311 | INFO     | PID=12023 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 01:34:12] 2025-11-24 00:33:31,312 | INFO     | .. there are 9 such processes running
[2025-11-24 01:34:12] 2025-11-24 00:33:32,312 | INFO     | time since job start (94290s) is within the limit (172800.0s)
[2025-11-24 01:34:12] 2025-11-24 00:33:33,372 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 01:34:12] 2025-11-24 00:33:33,373 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-24 01:34:12] 2025-11-24 00:33:33,375 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6893838777/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 01:34:12] 2025-11-24 00:33:33,375 | INFO     | extracted standard info from prmon json
[2025-11-24 01:34:12] 2025-11-24 00:33:33,376 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 01:34:12] 2025-11-24 00:33:33,376 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 01:34:12] 2025-11-24 00:33:33,416 | INFO     | fitting pss+swap vs Time
[2025-11-24 01:34:12] 2025-11-24 00:33:33,433 | INFO     | sum of square deviations: 1123703908560.3433
[2025-11-24 01:34:12] 2025-11-24 00:33:33,482 | INFO     | monitor loop #6352: job 0:6893838777 is in state 'finished'
[2025-11-24 01:34:12] 2025-11-24 00:33:33,482 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:34:12] 2025-11-24 00:33:33,510 | INFO     | sum of deviations: 4253867966242.5654
[2025-11-24 01:34:12] 2025-11-24 00:33:33,511 | INFO     | mean x: 1763897480.8587239
[2025-11-24 01:34:12] 2025-11-24 00:33:33,511 | INFO     | mean y: 2835406.0625
[2025-11-24 01:34:12] 2025-11-24 00:33:33,511 | INFO     | intersect: -6674534791.193471
[2025-11-24 01:34:12] 2025-11-24 00:33:33,513 | INFO     | chi2: 26.228602494655725
[2025-11-24 01:34:12] 2025-11-24 00:33:33,516 | INFO     | sum of square deviations: 1112766553956.082
[2025-11-24 01:34:12] 2025-11-24 00:33:33,592 | INFO     | sum of deviations: 4780055772075.869
[2025-11-24 01:34:12] 2025-11-24 00:33:33,592 | INFO     | mean x: 1763897328.3631613
[2025-11-24 01:34:12] 2025-11-24 00:33:33,593 | INFO     | mean y: 2842740.7988242977
[2025-11-24 01:34:12] 2025-11-24 00:33:33,593 | INFO     | intersect: -7574243015.253027
[2025-11-24 01:34:12] 2025-11-24 00:33:33,595 | INFO     | chi2: 22.797276388184958
[2025-11-24 01:34:12] 2025-11-24 00:33:33,595 | INFO     | current chi2=22.797276388184958 (change=13.08238251416531 %)
[2025-11-24 01:34:12] 2025-11-24 00:33:33,595 | INFO     | right removable region: 1530
[2025-11-24 01:34:12] 2025-11-24 00:33:33,597 | INFO     | sum of square deviations: 1112765280886.0815
[2025-11-24 01:34:12] 2025-11-24 00:33:33,664 | INFO     | sum of deviations: 3616786691388.7114
[2025-11-24 01:34:12] 2025-11-24 00:33:33,665 | INFO     | mean x: 1763897633.3631613
[2025-11-24 01:34:12] 2025-11-24 00:33:33,665 | INFO     | mean y: 2844287.6120182886
[2025-11-24 01:34:12] 2025-11-24 00:33:33,665 | INFO     | intersect: -5730297817.828129
[2025-11-24 01:34:12] 2025-11-24 00:33:33,667 | INFO     | chi2: 21.56067550446877
[2025-11-24 01:34:12] 2025-11-24 00:33:33,667 | INFO     | current chi2=21.56067550446877 (change=17.797086181538194 %)
[2025-11-24 01:34:12] 2025-11-24 00:33:33,668 | INFO     | left removable region: 10
[2025-11-24 01:34:12] 2025-11-24 00:33:33,670 | INFO     | sum of square deviations: 1088952161682.4928
[2025-11-24 01:34:12] 2025-11-24 00:33:33,737 | INFO     | sum of deviations: 3660872353692.914
[2025-11-24 01:34:12] 2025-11-24 00:33:33,738 | INFO     | mean x: 1763897602.8730264
[2025-11-24 01:34:12] 2025-11-24 00:33:33,738 | INFO     | mean y: 2861328.139473684
[2025-11-24 01:34:12] 2025-11-24 00:33:33,738 | INFO     | intersect: -5927063049.003054
[2025-11-24 01:34:12] 2025-11-24 00:33:33,740 | INFO     | chi2: 13.65538304027693
[2025-11-24 01:34:12] 2025-11-24 00:33:33,740 | INFO     | current memory leak: 3.36 B/s (using 1520 data points, chi2=13.66)
[2025-11-24 01:34:12] 2025-11-24 00:33:33,742 | INFO     | could have reported an average CPU frequency of 1999 MHz (52 samples)
[2025-11-24 01:34:12] 2025-11-24 00:33:33,743 | INFO     | ..............................
[2025-11-24 01:34:12] 2025-11-24 00:33:33,743 | INFO     | . Timing measurements:
[2025-11-24 01:34:12] 2025-11-24 00:33:33,743 | INFO     | . get job = 0 s
[2025-11-24 01:34:12] 2025-11-24 00:33:33,743 | INFO     | . initial setup = 8 s
[2025-11-24 01:34:12] 2025-11-24 00:33:33,743 | INFO     | . payload setup = 171 s
[2025-11-24 01:34:12] 2025-11-24 00:33:33,743 | INFO     | . stage-in = 0 s
[2025-11-24 01:34:12] 2025-11-24 00:33:33,743 | INFO     | . payload execution = 93807 s
[2025-11-24 01:34:12] 2025-11-24 00:33:33,743 | INFO     | . stage-out = 6 s
[2025-11-24 01:34:12] 2025-11-24 00:33:33,743 | INFO     | . log creation = 2 s
[2025-11-24 01:34:12] 2025-11-24 00:33:33,744 | INFO     | ..............................
[2025-11-24 01:34:12] 2025-11-24 00:33:33,870 | INFO     | 
[2025-11-24 01:34:12] 2025-11-24 00:33:33,870 | INFO     | job summary report
[2025-11-24 01:34:12] 2025-11-24 00:33:33,870 | INFO     | --------------------------------------------------
[2025-11-24 01:34:12] 2025-11-24 00:33:33,870 | INFO     | PanDA job id: 6893838777
[2025-11-24 01:34:12] 2025-11-24 00:33:33,870 | INFO     | task id: 47523449
[2025-11-24 01:34:12] 2025-11-24 00:33:33,870 | INFO     | errors: (none)
[2025-11-24 01:34:12] 2025-11-24 00:33:33,870 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 01:34:12] 2025-11-24 00:33:33,870 | INFO     | pilot state: finished 
[2025-11-24 01:34:12] 2025-11-24 00:33:33,871 | INFO     | transexitcode: 0
[2025-11-24 01:34:12] 2025-11-24 00:33:33,871 | INFO     | exeerrorcode: 0
[2025-11-24 01:34:12] 2025-11-24 00:33:33,871 | INFO     | exeerrordiag: 
[2025-11-24 01:34:12] 2025-11-24 00:33:33,871 | INFO     | exitcode: 0
[2025-11-24 01:34:12] 2025-11-24 00:33:33,871 | INFO     | exitmsg: OK
[2025-11-24 01:34:12] 2025-11-24 00:33:33,871 | INFO     | cpuconsumptiontime: 338226 s
[2025-11-24 01:34:12] 2025-11-24 00:33:33,871 | INFO     | nevents: 1000
[2025-11-24 01:34:12] 2025-11-24 00:33:33,871 | INFO     | neventsw: 0
[2025-11-24 01:34:12] 2025-11-24 00:33:33,871 | INFO     | pid: 18628
[2025-11-24 01:34:12] 2025-11-24 00:33:33,871 | INFO     | pgrp: 18628
[2025-11-24 01:34:12] 2025-11-24 00:33:33,871 | INFO     | corecount: 8
[2025-11-24 01:34:12] 2025-11-24 00:33:33,871 | INFO     | event service: False
[2025-11-24 01:34:12] 2025-11-24 00:33:33,872 | INFO     | sizes: {0: 2298581, 1: 2298836, 2: 2298836, 12: 2298864, 23: 2298892, 34: 2298920, 44: 2299076, 55: 2299104, 66: 2299132, 77: 2299160, 87: 2299216, 98: 2299524, 10
[2025-11-24 01:34:12] 2025-11-24 00:33:33,872 | INFO     | --------------------------------------------------
[2025-11-24 01:34:12] 2025-11-24 00:33:33,872 | INFO     | 
[2025-11-24 01:34:12] 2025-11-24 00:33:33,872 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-11-24 01:34:12] 2025-11-24 00:33:34,320 | INFO     | time since job start (94292s) is within the limit (172800.0s)
[2025-11-24 01:34:12] 2025-11-24 00:33:34,464 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 01:34:12] 2025-11-24 00:33:34,464 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 01:34:12] 2025-11-24 00:33:34,465 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 01:34:12] 2025-11-24 00:33:34,465 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 01:34:12] 2025-11-24 00:33:34,465 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 01:34:12] 2025-11-24 00:33:34,465 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 01:34:12] 2025-11-24 00:33:34,465 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 01:34:12] 2025-11-24 00:33:34,465 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 01:34:12] 2025-11-24 00:33:34,465 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 01:34:12] 2025-11-24 00:33:34,465 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 01:34:12] 2025-11-24 00:33:34,465 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 01:34:12] 2025-11-24 00:33:34,465 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 01:34:12] 2025-11-24 00:33:34,466 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 01:34:12] 2025-11-24 00:33:34,466 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 01:34:12] 2025-11-24 00:33:34,466 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 01:34:12] 2025-11-24 00:33:34,466 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 01:34:12] 2025-11-24 00:33:34,466 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 01:34:12] 2025-11-24 00:33:34,466 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 01:34:12] 2025-11-24 00:33:34,466 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 01:34:12] 2025-11-24 00:33:34,466 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 01:34:12] 2025-11-24 00:33:34,466 | INFO     | job 6893838777 has completed (purged errors)
[2025-11-24 01:34:12] 2025-11-24 00:33:34,467 | INFO     | overall cleanup function is called
[2025-11-24 01:34:12] 2025-11-24 00:33:35,495 | INFO     | --- collectZombieJob: --- 10, [18628]
[2025-11-24 01:34:12] 2025-11-24 00:33:35,495 | INFO     | zombie collector waiting for pid 18628
[2025-11-24 01:34:12] 2025-11-24 00:33:35,495 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 01:34:12] 2025-11-24 00:33:35,495 | INFO     | collected zombie processes
[2025-11-24 01:34:12] 2025-11-24 00:33:35,495 | INFO     | will attempt to kill all subprocesses of pid=18628
[2025-11-24 01:34:12] 2025-11-24 00:33:35,596 | INFO     | process IDs to be killed: [18628] (in reverse order)
[2025-11-24 01:34:12] 2025-11-24 00:33:36,412 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 01:34:12] 2025-11-24 00:33:36,413 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 01:34:12] 2025-11-24 00:33:36,417 | INFO     | did not find any defunct processes belonging to 18628
[2025-11-24 01:34:12] 2025-11-24 00:33:36,421 | INFO     | did not find any defunct processes belonging to 18628
[2025-11-24 01:34:12] 2025-11-24 00:33:36,425 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 01:34:12] 2025-11-24 00:33:36,425 | INFO     | ready for new job
[2025-11-24 01:34:12] 2025-11-24 00:33:36,425 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 01:34:12] 2025-11-24 00:33:36,436 | INFO     | ***************************************
[2025-11-24 01:34:12] 2025-11-24 00:33:36,436 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 01:34:12] 2025-11-24 00:33:36,436 | INFO     | ***************************************
[2025-11-24 01:34:12] 2025-11-24 00:33:36,436 | INFO     | 
[2025-11-24 01:34:12] 2025-11-24 00:33:36,437 | INFO     | pilot is running in a VM
[2025-11-24 01:34:12] 2025-11-24 00:33:36,437 | INFO     | architecture information:
[2025-11-24 01:34:12] 2025-11-24 00:33:36,444 | INFO     | executing command: cat /etc/os-release
[2025-11-24 01:34:12] 2025-11-24 00:33:36,631 | INFO     | cat /etc/os-release:
[2025-11-24 01:34:12] NAME="CentOS Linux"
[2025-11-24 01:34:12] VERSION="7 (Core)"
[2025-11-24 01:34:12] ID="centos"
[2025-11-24 01:34:12] ID_LIKE="rhel fedora"
[2025-11-24 01:34:12] VERSION_ID="7"
[2025-11-24 01:34:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 01:34:12] ANSI_COLOR="0;31"
[2025-11-24 01:34:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 01:34:12] HOME_URL="https://www.centos.org/"
[2025-11-24 01:34:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 01:34:12] 
[2025-11-24 01:34:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 01:34:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 01:34:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 01:34:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 01:34:12] 
[2025-11-24 01:34:12] 2025-11-24 00:33:36,632 | INFO     | ***************************************
[2025-11-24 01:34:12] 2025-11-24 00:33:37,135 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-11-24 01:34:12] 2025-11-24 00:33:37,411 | INFO     | sufficient remaining disk space (494933114880 B)
[2025-11-24 01:34:12] 2025-11-24 00:33:37,411 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 01:34:12] 2025-11-24 00:33:37,412 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 01:34:12] 2025-11-24 00:33:37,412 | INFO     | update_server=False
[2025-11-24 01:34:12] 2025-11-24 00:33:37,412 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 01:34:12] 2025-11-24 00:33:37,412 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:34:12] 2025-11-24 00:33:37,412 | INFO     | aborting loop
[2025-11-24 01:34:12] 2025-11-24 00:33:37,413 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 01:34:12] 2025-11-24 00:33:37,538 | INFO     | all payload control threads have been joined
[2025-11-24 01:34:12] 2025-11-24 00:33:38,016 | INFO     | all data control threads have been joined
[2025-11-24 01:34:12] 2025-11-24 00:33:38,418 | INFO     | [job] retrieve thread has finished
[2025-11-24 01:34:12] 2025-11-24 00:33:38,419 | INFO     | [job] job monitor thread has finished
[2025-11-24 01:34:12] 2025-11-24 00:33:38,448 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 01:34:12] 2025-11-24 00:33:38,544 | INFO     | [payload] control thread has finished
[2025-11-24 01:34:12] 2025-11-24 00:33:38,698 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 01:34:12] 2025-11-24 00:33:38,720 | INFO     | [job] validate thread has finished
[2025-11-24 01:34:12] 2025-11-24 00:33:38,754 | INFO     | [payload] failed_post thread has finished
[2025-11-24 01:34:12] 2025-11-24 00:33:38,883 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:34:12] 2025-11-24 00:33:39,018 | INFO     | all job control threads have been joined
[2025-11-24 01:34:12] 2025-11-24 00:33:39,022 | INFO     | [data] control thread has finished
[2025-11-24 01:34:12] 2025-11-24 00:33:39,185 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 01:34:12] 2025-11-24 00:33:39,399 | INFO     | [payload] validate_post thread has finished
[2025-11-24 01:34:12] 2025-11-24 00:33:39,601 | INFO     | [data] copytool_in thread has finished
[2025-11-24 01:34:12] 2025-11-24 00:33:39,716 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 01:34:12] 2025-11-24 00:33:39,783 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 01:34:12] 2025-11-24 00:33:39,888 | INFO     | [job] queue monitor thread has finished
[2025-11-24 01:34:12] 2025-11-24 00:33:40,024 | INFO     | [job] control thread has finished
[2025-11-24 01:34:12] 2025-11-24 00:33:40,705 | INFO     | [data] copytool_out thread has finished
[2025-11-24 01:34:12] 2025-11-24 00:33:41,422 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 01:34:12] 2025-11-24 00:33:46,894 | INFO     | [monitor] cgroup control has ended
[2025-11-24 01:34:12] 2025-11-24 00:33:48,802 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140143409235776)>', '<ExcThread(monitor, started 140142828316416)>']
[2025-11-24 01:34:12] 2025-11-24 00:33:53,828 | INFO     | all workflow threads have been joined
[2025-11-24 01:34:12] 2025-11-24 00:33:53,828 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 01:34:12] 2025-11-24 00:33:53,828 | INFO     | traces error code: 0
[2025-11-24 01:34:12] 2025-11-24 00:33:53,828 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 01:34:12] 2025-11-24 00:34:07,498 | INFO     | PID=12023 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 01:34:12] 2025-11-24 00:34:07,499 | INFO     | .. there are 9 such processes running
[2025-11-24 01:34:12] 2025-11-24 00:34:07,499 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 01:34:12] 2025-11-24 00:34:07,499 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 01:34:12] 2025-11-24 00:34:07,499 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 01:34:12] 2025-11-24 00:34:07,499 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 01:34:12] 2025-11-24 00:34:07,499 | INFO     | [monitor] control thread has ended
[2025-11-24 01:34:12] 2025-11-24 00:34:07,874 [wrapper] ==== pilot stdout END ====
[2025-11-24 01:34:12] 2025-11-24 00:34:07,908 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 01:34:12] 2025-11-24 00:34:07,963 [wrapper] pilotpid: 12023
[2025-11-24 01:34:12] 2025-11-24 00:34:08,067 [wrapper] Pilot exit status: 0
[2025-11-24 01:34:12] 2025-11-24 00:34:08,444 [wrapper] pandaids: 6893838777
[2025-11-24 01:34:12] 2025-11-24 00:34:09,509 [wrapper] cleanup supervisor_pilot 28457 12024
[2025-11-24 01:34:12] 2025-11-24 00:34:09,568 [wrapper] Test setup, not cleaning
[2025-11-24 01:34:12] 2025-11-24 00:34:09,681 [wrapper] apfmon messages muted
[2025-11-24 01:34:12] 2025-11-24 00:34:09,788 [wrapper] ==== wrapper stdout END ====
[2025-11-24 01:34:12] 2025-11-24 00:34:09,872 [wrapper] ==== wrapper stderr END ====
[2025-11-24 01:34:12]  *** Error codes and diagnostics ***
[2025-11-24 01:34:12]     "exeErrorCode": 0,
[2025-11-24 01:34:12]     "exeErrorDiag": "",
[2025-11-24 01:34:12]     "pilotErrorCode": 0,
[2025-11-24 01:34:12]     "pilotErrorDiag": "",
[2025-11-24 01:34:12]  *** Listing of results directory ***
[2025-11-24 01:34:12] total 1337036
[2025-11-24 01:34:12] -rw-r--r--. 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-24 01:34:12] -rw-r--r--. 1 boinc boinc      5112 Nov 20 11:17 queuedata.json
[2025-11-24 01:34:12] -rwx------. 1 boinc boinc     36292 Nov 20 11:18 runpilot2-wrapper.sh
[2025-11-24 01:34:12] -rw-r--r--. 1 boinc boinc       100 Nov 22 23:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 01:34:12] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 23:18 run_atlas
[2025-11-24 01:34:12] -rw-r--r--. 1 boinc boinc       105 Nov 22 23:18 job.xml
[2025-11-24 01:34:12] -rw-r--r--. 2 boinc boinc 410493164 Nov 22 23:18 EVNT.47493127._000142.pool.root.1
[2025-11-24 01:34:12] -rw-r--r--. 1 boinc boinc      6393 Nov 22 23:18 init_data.xml
[2025-11-24 01:34:12] -rw-r--r--. 2 boinc boinc     15847 Nov 22 23:18 start_atlas.sh
[2025-11-24 01:34:12] drwxrwx--x. 2 boinc boinc        68 Nov 22 23:18 shared
[2025-11-24 01:34:12] -rw-r--r--. 2 boinc boinc    590100 Nov 22 23:18 input.tar.gz
[2025-11-24 01:34:12] -rw-r--r--. 1 boinc boinc         0 Nov 22 23:18 boinc_lockfile
[2025-11-24 01:34:12] -rw-r--r--. 1 boinc boinc      2786 Nov 22 23:18 pandaJob.out
[2025-11-24 01:34:12] -rw-------. 1 boinc boinc    989784 Nov 22 23:21 agis_schedconf.cvmfs.json
[2025-11-24 01:34:12] drwx------. 5 boinc boinc      4096 Nov 22 23:22 pilot3
[2025-11-24 01:34:12] -rw-r--r--. 1 boinc boinc       533 Nov 24 01:06 boinc_task_state.xml
[2025-11-24 01:34:12] -rw-------. 1 boinc boinc 924333364 Nov 24 01:30 HITS.47523449._001420.pool.root.1
[2025-11-24 01:34:12] -rw-------. 1 boinc boinc      1031 Nov 24 01:31 memory_monitor_summary.json
[2025-11-24 01:34:12] -rw-------. 1 boinc boinc   1526164 Nov 24 01:31 agis_ddmendpoints.agis.ALL.json
[2025-11-24 01:34:12] -rw-------. 1 boinc boinc   2604611 Nov 24 01:31 log.47523449._001420.job.log.tgz.1
[2025-11-24 01:34:12] -rw-------. 1 boinc boinc      8631 Nov 24 01:33 heartbeat.json
[2025-11-24 01:34:12] -rw-------. 1 boinc boinc        95 Nov 24 01:33 pilot_heartbeat.json
[2025-11-24 01:34:12] -rw-------. 1 boinc boinc       820 Nov 24 01:34 pilotlog.txt
[2025-11-24 01:34:12] -rw-r--r--. 1 boinc boinc      8192 Nov 24 01:34 boinc_mmap_file
[2025-11-24 01:34:12] -rw-r--r--. 1 boinc boinc        29 Nov 24 01:34 wrapper_checkpoint.txt
[2025-11-24 01:34:12] -rw-------. 1 boinc boinc  12590294 Nov 24 01:34 log.47523449._001420.job.log.1
[2025-11-24 01:34:12] -rw-------. 1 boinc boinc       353 Nov 24 01:34 output.list
[2025-11-24 01:34:12] -rw-r--r--. 1 boinc boinc       620 Nov 24 01:34 runtime_log
[2025-11-24 01:34:12] -rw-------. 1 boinc boinc  15216640 Nov 24 01:34 result.tar.gz
[2025-11-24 01:34:12] -rw-r--r--. 1 boinc boinc      8833 Nov 24 01:34 runtime_log.err
[2025-11-24 01:34:12] -rw-------. 1 boinc boinc       662 Nov 24 01:34 nLbLDmFvGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxMGKDmPHIbom.diag
[2025-11-24 01:34:12] -rw-r--r--. 1 boinc boinc     21501 Nov 24 01:34 stderr.txt
[2025-11-24 01:34:12] HITS file was successfully produced:
[2025-11-24 01:34:12] -rw-------. 1 boinc boinc 924333364 Nov 24 01:30 shared/HITS.pool.root.1
[2025-11-24 01:34:12]  *** Contents of shared directory: ***
[2025-11-24 01:34:12] total 1319004
[2025-11-24 01:34:12] -rw-r--r--. 2 boinc boinc 410493164 Nov 22 23:18 ATLAS.root_0
[2025-11-24 01:34:12] -rw-r--r--. 2 boinc boinc     15847 Nov 22 23:18 start_atlas.sh
[2025-11-24 01:34:12] -rw-r--r--. 2 boinc boinc    590100 Nov 22 23:18 input.tar.gz
[2025-11-24 01:34:12] -rw-------. 1 boinc boinc 924333364 Nov 24 01:30 HITS.pool.root.1
[2025-11-24 01:34:12] -rw-------. 1 boinc boinc  15216640 Nov 24 01:34 result.tar.gz
01:34:14 (8189): run_atlas exited; CPU time 338781.643989
01:34:14 (8189): called boinc_finish(0)

</stderr_txt>
]]>

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