Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:58:36 (19298): wrapper (7.7.26015): starting
23:58:36 (19298): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 23:58:36] Arguments: --nthreads 8
[2025-11-22 23:58:36] Threads: 8
[2025-11-22 23:58:36] Checking for CVMFS
[2025-11-22 23:58:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 23:58:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 23:58:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 23:58:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 23:58:38] 2.11.2.0 23903 78218 135884 153187 3 118 20505794 25165825 4462 130560 237 23134904 99.879 12814003 1948 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-22 23:58:38] CVMFS is ok
[2025-11-22 23:58:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 23:58:38] Checking for apptainer binary...
[2025-11-22 23:58:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 23:58:38] Running /usr/bin/apptainer --version
[2025-11-22 23:58:38] apptainer version 1.3.2-1.el7
[2025-11-22 23:58:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 23:58:45] cg-vwn444.simple-grid.lan
[2025-11-22 23:58:45] apptainer works
[2025-11-22 23:58:46] Set ATHENA_PROC_NUMBER=8
[2025-11-22 23:58:46] Set ATHENA_CORE_NUMBER=8
[2025-11-22 23:58:46] Starting ATLAS job with PandaID=6893851329
[2025-11-22 23:58:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 01:50:27]  *** The last 200 lines of the pilot log: ***
[2025-11-24 01:50:27] 2025-11-24 00:49:13,108 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:50:27] 2025-11-24 00:49:14,428 | INFO     | time since job start (92799s) is within the limit (172800.0s)
[2025-11-24 01:50:27] 2025-11-24 00:49:15,615 | INFO     | monitor loop #6247: job 0:6893851329 is in state 'finished'
[2025-11-24 01:50:27] 2025-11-24 00:49:15,615 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:50:27] 2025-11-24 00:49:16,439 | INFO     | time since job start (92801s) is within the limit (172800.0s)
[2025-11-24 01:50:27] 2025-11-24 00:49:18,125 | INFO     | monitor loop #6248: job 0:6893851329 is in state 'finished'
[2025-11-24 01:50:27] 2025-11-24 00:49:18,125 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:50:27] 2025-11-24 00:49:18,448 | INFO     | time since job start (92803s) is within the limit (172800.0s)
[2025-11-24 01:50:27] 2025-11-24 00:49:20,454 | INFO     | time since job start (92805s) is within the limit (172800.0s)
[2025-11-24 01:50:27] 2025-11-24 00:49:20,630 | INFO     | monitor loop #6249: job 0:6893851329 is in state 'finished'
[2025-11-24 01:50:27] 2025-11-24 00:49:20,630 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:50:27] 2025-11-24 00:49:22,465 | INFO     | time since job start (92807s) is within the limit (172800.0s)
[2025-11-24 01:50:27] 2025-11-24 00:49:23,136 | INFO     | monitor loop #6250: job 0:6893851329 is in state 'finished'
[2025-11-24 01:50:27] 2025-11-24 00:49:23,136 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:50:27] 2025-11-24 00:49:23,428 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 01:50:27] 2025-11-24 00:49:23,429 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-24 01:50:27] 2025-11-24 00:49:23,431 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6893851329/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 01:50:27] 2025-11-24 00:49:23,432 | INFO     | extracted standard info from prmon json
[2025-11-24 01:50:27] 2025-11-24 00:49:23,432 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 01:50:27] 2025-11-24 00:49:23,432 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 01:50:27] 2025-11-24 00:49:23,462 | INFO     | fitting pss+swap vs Time
[2025-11-24 01:50:27] 2025-11-24 00:49:23,465 | INFO     | sum of square deviations: 1071848410575.5121
[2025-11-24 01:50:27] 2025-11-24 00:49:23,544 | INFO     | sum of deviations: 2203110017592.527
[2025-11-24 01:50:27] 2025-11-24 00:49:23,545 | INFO     | mean x: 1763899156.9021163
[2025-11-24 01:50:27] 2025-11-24 00:49:23,545 | INFO     | mean y: 2844985.084656085
[2025-11-24 01:50:27] 2025-11-24 00:49:23,545 | INFO     | intersect: -3622727310.6353183
[2025-11-24 01:50:27] 2025-11-24 00:49:23,547 | INFO     | chi2: 19.76665073350109
[2025-11-24 01:50:27] 2025-11-24 00:49:23,549 | INFO     | sum of square deviations: 1061250756125.6503
[2025-11-24 01:50:27] 2025-11-24 00:49:23,626 | INFO     | sum of deviations: 2689814305329.6953
[2025-11-24 01:50:27] 2025-11-24 00:49:23,627 | INFO     | mean x: 1763899004.4067683
[2025-11-24 01:50:27] 2025-11-24 00:49:23,627 | INFO     | mean y: 2851987.4426011946
[2025-11-24 01:50:27] 2025-11-24 00:49:23,627 | INFO     | intersect: -4467873472.89185
[2025-11-24 01:50:27] 2025-11-24 00:49:23,629 | INFO     | chi2: 16.678849370105873
[2025-11-24 01:50:27] 2025-11-24 00:49:23,629 | INFO     | current chi2=16.678849370105873 (change=15.621267381235828 %)
[2025-11-24 01:50:27] 2025-11-24 00:49:23,629 | INFO     | right removable region: 1506
[2025-11-24 01:50:27] 2025-11-24 00:49:23,632 | INFO     | sum of square deviations: 1061249462925.6505
[2025-11-24 01:50:27] 2025-11-24 00:49:23,715 | INFO     | sum of deviations: 1617589824303.1584
[2025-11-24 01:50:27] 2025-11-24 00:49:23,716 | INFO     | mean x: 1763899309.4067683
[2025-11-24 01:50:27] 2025-11-24 00:49:23,717 | INFO     | mean y: 2853407.9263437293
[2025-11-24 01:50:27] 2025-11-24 00:49:23,717 | INFO     | intersect: -2685737421.7225866
[2025-11-24 01:50:27] 2025-11-24 00:49:23,719 | INFO     | chi2: 15.826719570293804
[2025-11-24 01:50:27] 2025-11-24 00:49:23,719 | INFO     | current chi2=15.826719570293804 (change=19.932214194131422 %)
[2025-11-24 01:50:27] 2025-11-24 00:49:23,719 | INFO     | left removable region: 10
[2025-11-24 01:50:27] 2025-11-24 00:49:23,721 | INFO     | sum of square deviations: 1038180100439.0479
[2025-11-24 01:50:27] 2025-11-24 00:49:23,841 | INFO     | sum of deviations: 1996849730988.9673
[2025-11-24 01:50:27] 2025-11-24 00:49:23,841 | INFO     | mean x: 1763899278.9144385
[2025-11-24 01:50:27] 2025-11-24 00:49:23,841 | INFO     | mean y: 2865050.0387700535
[2025-11-24 01:50:27] 2025-11-24 00:49:23,842 | INFO     | intersect: -3389842823.1928287
[2025-11-24 01:50:27] 2025-11-24 00:49:23,844 | INFO     | chi2: 11.457337355878295
[2025-11-24 01:50:27] 2025-11-24 00:49:23,844 | INFO     | current memory leak: 1.92 B/s (using 1496 data points, chi2=11.46)
[2025-11-24 01:50:27] 2025-11-24 00:49:23,847 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-24 01:50:27] 2025-11-24 00:49:23,847 | INFO     | ..............................
[2025-11-24 01:50:27] 2025-11-24 00:49:23,848 | INFO     | . Timing measurements:
[2025-11-24 01:50:27] 2025-11-24 00:49:23,848 | INFO     | . get job = 0 s
[2025-11-24 01:50:27] 2025-11-24 00:49:23,848 | INFO     | . initial setup = 6 s
[2025-11-24 01:50:27] 2025-11-24 00:49:23,848 | INFO     | . payload setup = 154 s
[2025-11-24 01:50:27] 2025-11-24 00:49:23,848 | INFO     | . stage-in = 0 s
[2025-11-24 01:50:27] 2025-11-24 00:49:23,848 | INFO     | . payload execution = 92352 s
[2025-11-24 01:50:27] 2025-11-24 00:49:23,848 | INFO     | . stage-out = 6 s
[2025-11-24 01:50:27] 2025-11-24 00:49:23,848 | INFO     | . log creation = 2 s
[2025-11-24 01:50:27] 2025-11-24 00:49:23,848 | INFO     | ..............................
[2025-11-24 01:50:27] 2025-11-24 00:49:24,074 | INFO     | 
[2025-11-24 01:50:27] 2025-11-24 00:49:24,075 | INFO     | job summary report
[2025-11-24 01:50:27] 2025-11-24 00:49:24,075 | INFO     | --------------------------------------------------
[2025-11-24 01:50:27] 2025-11-24 00:49:24,075 | INFO     | PanDA job id: 6893851329
[2025-11-24 01:50:27] 2025-11-24 00:49:24,075 | INFO     | task id: 47523449
[2025-11-24 01:50:27] 2025-11-24 00:49:24,075 | INFO     | errors: (none)
[2025-11-24 01:50:27] 2025-11-24 00:49:24,075 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 01:50:27] 2025-11-24 00:49:24,075 | INFO     | pilot state: finished 
[2025-11-24 01:50:27] 2025-11-24 00:49:24,076 | INFO     | transexitcode: 0
[2025-11-24 01:50:27] 2025-11-24 00:49:24,076 | INFO     | exeerrorcode: 0
[2025-11-24 01:50:27] 2025-11-24 00:49:24,076 | INFO     | exeerrordiag: 
[2025-11-24 01:50:27] 2025-11-24 00:49:24,076 | INFO     | exitcode: 0
[2025-11-24 01:50:27] 2025-11-24 00:49:24,076 | INFO     | exitmsg: OK
[2025-11-24 01:50:27] 2025-11-24 00:49:24,076 | INFO     | cpuconsumptiontime: 335550 s
[2025-11-24 01:50:27] 2025-11-24 00:49:24,076 | INFO     | nevents: 1000
[2025-11-24 01:50:27] 2025-11-24 00:49:24,076 | INFO     | neventsw: 0
[2025-11-24 01:50:27] 2025-11-24 00:49:24,076 | INFO     | pid: 29761
[2025-11-24 01:50:27] 2025-11-24 00:49:24,076 | INFO     | pgrp: 29761
[2025-11-24 01:50:27] 2025-11-24 00:49:24,077 | INFO     | corecount: 8
[2025-11-24 01:50:27] 2025-11-24 00:49:24,077 | INFO     | event service: False
[2025-11-24 01:50:27] 2025-11-24 00:49:24,077 | INFO     | sizes: {0: 2297978, 1: 2298720, 2: 2298862, 13: 2298862, 23: 2298918, 34: 2298946, 45: 2299102, 56: 2299130, 67: 2299158, 78: 2299186, 88: 2299242, 92: 2299812, 99
[2025-11-24 01:50:27] 2025-11-24 00:49:24,077 | INFO     | --------------------------------------------------
[2025-11-24 01:50:27] 2025-11-24 00:49:24,077 | INFO     | 
[2025-11-24 01:50:27] 2025-11-24 00:49:24,077 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-11-24 01:50:27] 2025-11-24 00:49:24,112 | INFO     | PID=23118 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 01:50:27] 2025-11-24 00:49:24,112 | INFO     | .. there are 9 such processes running
[2025-11-24 01:50:27] 2025-11-24 00:49:24,701 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 01:50:27] 2025-11-24 00:49:24,702 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 01:50:27] 2025-11-24 00:49:24,702 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 01:50:27] 2025-11-24 00:49:24,702 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 01:50:27] 2025-11-24 00:49:24,702 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 01:50:27] 2025-11-24 00:49:24,702 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 01:50:27] 2025-11-24 00:49:24,702 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 01:50:27] 2025-11-24 00:49:24,702 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 01:50:27] 2025-11-24 00:49:24,703 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 01:50:27] 2025-11-24 00:49:24,703 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 01:50:27] 2025-11-24 00:49:24,703 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 01:50:27] 2025-11-24 00:49:24,703 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 01:50:27] 2025-11-24 00:49:24,703 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 01:50:27] 2025-11-24 00:49:24,703 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 01:50:27] 2025-11-24 00:49:24,703 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 01:50:27] 2025-11-24 00:49:24,703 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 01:50:27] 2025-11-24 00:49:24,703 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 01:50:27] 2025-11-24 00:49:24,704 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 01:50:27] 2025-11-24 00:49:24,704 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 01:50:27] 2025-11-24 00:49:24,704 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 01:50:27] 2025-11-24 00:49:24,704 | INFO     | job 6893851329 has completed (purged errors)
[2025-11-24 01:50:27] 2025-11-24 00:49:24,704 | INFO     | overall cleanup function is called
[2025-11-24 01:50:27] 2025-11-24 00:49:25,731 | INFO     | --- collectZombieJob: --- 10, [29761]
[2025-11-24 01:50:27] 2025-11-24 00:49:25,731 | INFO     | zombie collector waiting for pid 29761
[2025-11-24 01:50:27] 2025-11-24 00:49:25,731 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 01:50:27] 2025-11-24 00:49:25,731 | INFO     | collected zombie processes
[2025-11-24 01:50:27] 2025-11-24 00:49:25,732 | INFO     | will attempt to kill all subprocesses of pid=29761
[2025-11-24 01:50:27] 2025-11-24 00:49:25,884 | INFO     | process IDs to be killed: [29761] (in reverse order)
[2025-11-24 01:50:27] 2025-11-24 00:49:26,584 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 01:50:27] 2025-11-24 00:49:26,585 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 01:50:27] 2025-11-24 00:49:26,588 | INFO     | did not find any defunct processes belonging to 29761
[2025-11-24 01:50:27] 2025-11-24 00:49:26,592 | INFO     | did not find any defunct processes belonging to 29761
[2025-11-24 01:50:27] 2025-11-24 00:49:26,650 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 01:50:27] 2025-11-24 00:49:26,651 | INFO     | ready for new job
[2025-11-24 01:50:27] 2025-11-24 00:49:26,651 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 01:50:27] 2025-11-24 00:49:26,658 | INFO     | ***************************************
[2025-11-24 01:50:27] 2025-11-24 00:49:26,658 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 01:50:27] 2025-11-24 00:49:26,659 | INFO     | ***************************************
[2025-11-24 01:50:27] 2025-11-24 00:49:26,659 | INFO     | 
[2025-11-24 01:50:27] 2025-11-24 00:49:26,665 | INFO     | pilot is running in a VM
[2025-11-24 01:50:27] 2025-11-24 00:49:26,665 | INFO     | architecture information:
[2025-11-24 01:50:27] 2025-11-24 00:49:26,682 | INFO     | executing command: cat /etc/os-release
[2025-11-24 01:50:27] 2025-11-24 00:49:26,963 | INFO     | cat /etc/os-release:
[2025-11-24 01:50:27] NAME="CentOS Linux"
[2025-11-24 01:50:27] VERSION="7 (Core)"
[2025-11-24 01:50:27] ID="centos"
[2025-11-24 01:50:27] ID_LIKE="rhel fedora"
[2025-11-24 01:50:27] VERSION_ID="7"
[2025-11-24 01:50:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 01:50:27] ANSI_COLOR="0;31"
[2025-11-24 01:50:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 01:50:27] HOME_URL="https://www.centos.org/"
[2025-11-24 01:50:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 01:50:27] 
[2025-11-24 01:50:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 01:50:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 01:50:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 01:50:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 01:50:27] 
[2025-11-24 01:50:27] 2025-11-24 00:49:26,964 | INFO     | ***************************************
[2025-11-24 01:50:27] 2025-11-24 00:49:27,467 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-11-24 01:50:27] 2025-11-24 00:49:27,603 | INFO     | sufficient remaining disk space (494941503488 B)
[2025-11-24 01:50:27] 2025-11-24 00:49:27,604 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 01:50:27] 2025-11-24 00:49:27,604 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 01:50:27] 2025-11-24 00:49:27,604 | INFO     | update_server=False
[2025-11-24 01:50:27] 2025-11-24 00:49:27,604 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 01:50:27] 2025-11-24 00:49:27,605 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 01:50:27] 2025-11-24 00:49:27,605 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:50:27] 2025-11-24 00:49:27,605 | INFO     | aborting loop
[2025-11-24 01:50:27] 2025-11-24 00:49:28,026 | INFO     | all data control threads have been joined
[2025-11-24 01:50:27] 2025-11-24 00:49:28,266 | INFO     | all job control threads have been joined
[2025-11-24 01:50:27] 2025-11-24 00:49:28,609 | INFO     | [job] retrieve thread has finished
[2025-11-24 01:50:27] 2025-11-24 00:49:28,612 | INFO     | [job] job monitor thread has finished
[2025-11-24 01:50:27] 2025-11-24 00:49:28,673 | INFO     | [data] copytool_in thread has finished
[2025-11-24 01:50:27] 2025-11-24 00:49:28,681 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 01:50:27] 2025-11-24 00:49:28,695 | INFO     | all payload control threads have been joined
[2025-11-24 01:50:27] 2025-11-24 00:49:28,853 | INFO     | [job] validate thread has finished
[2025-11-24 01:50:27] 2025-11-24 00:49:29,032 | INFO     | [data] control thread has finished
[2025-11-24 01:50:27] 2025-11-24 00:49:29,096 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:50:27] 2025-11-24 00:49:29,123 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 01:50:27] 2025-11-24 00:49:29,229 | INFO     | [payload] failed_post thread has finished
[2025-11-24 01:50:27] 2025-11-24 00:49:29,272 | INFO     | [job] control thread has finished
[2025-11-24 01:50:27] 2025-11-24 00:49:29,380 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 01:50:27] 2025-11-24 00:49:29,565 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 01:50:27] 2025-11-24 00:49:29,701 | INFO     | [payload] control thread has finished
[2025-11-24 01:50:27] 2025-11-24 00:49:29,842 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 01:50:27] 2025-11-24 00:49:30,068 | INFO     | [payload] validate_post thread has finished
[2025-11-24 01:50:27] 2025-11-24 00:49:30,102 | INFO     | [job] queue monitor thread has finished
[2025-11-24 01:50:27] 2025-11-24 00:49:30,689 | INFO     | [data] copytool_out thread has finished
[2025-11-24 01:50:27] 2025-11-24 00:49:31,617 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 01:50:27] 2025-11-24 00:49:56,310 | INFO     | PID=23118 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 01:50:27] 2025-11-24 00:49:56,310 | INFO     | .. there are 9 such processes running
[2025-11-24 01:50:27] 2025-11-24 00:49:56,311 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 01:50:27] 2025-11-24 00:49:56,311 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 01:50:27] 2025-11-24 00:49:56,311 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 01:50:27] 2025-11-24 00:50:16,509 | INFO     | [monitor] cgroup control has ended
[2025-11-24 01:50:27] 2025-11-24 00:50:17,898 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140270552786752)>', '<ExcThread(monitor, started 140270108653312)>']
[2025-11-24 01:50:27] 2025-11-24 00:50:18,445 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 01:50:27] 2025-11-24 00:50:18,445 | INFO     | [monitor] control thread has ended
[2025-11-24 01:50:27] 2025-11-24 00:50:22,925 | INFO     | all workflow threads have been joined
[2025-11-24 01:50:27] 2025-11-24 00:50:22,925 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 01:50:27] 2025-11-24 00:50:22,926 | INFO     | traces error code: 0
[2025-11-24 01:50:27] 2025-11-24 00:50:22,926 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 01:50:27] 2025-11-24 00:50:23,274 [wrapper] ==== pilot stdout END ====
[2025-11-24 01:50:27] 2025-11-24 00:50:23,280 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 01:50:27] 2025-11-24 00:50:23,300 [wrapper] pilotpid: 23118
[2025-11-24 01:50:27] 2025-11-24 00:50:23,459 [wrapper] Pilot exit status: 0
[2025-11-24 01:50:27] 2025-11-24 00:50:23,907 [wrapper] pandaids: 6893851329
[2025-11-24 01:50:27] 2025-11-24 00:50:24,782 [wrapper] cleanup supervisor_pilot 20597 23119
[2025-11-24 01:50:27] 2025-11-24 00:50:24,863 [wrapper] Test setup, not cleaning
[2025-11-24 01:50:27] 2025-11-24 00:50:24,962 [wrapper] apfmon messages muted
[2025-11-24 01:50:27] 2025-11-24 00:50:25,086 [wrapper] ==== wrapper stdout END ====
[2025-11-24 01:50:27] 2025-11-24 00:50:25,206 [wrapper] ==== wrapper stderr END ====
[2025-11-24 01:50:27]  *** Error codes and diagnostics ***
[2025-11-24 01:50:27]     "exeErrorCode": 0,
[2025-11-24 01:50:27]     "exeErrorDiag": "",
[2025-11-24 01:50:27]     "pilotErrorCode": 0,
[2025-11-24 01:50:27]     "pilotErrorDiag": "",
[2025-11-24 01:50:27]  *** Listing of results directory ***
[2025-11-24 01:50:27] total 1322372
[2025-11-24 01:50:27] -rw-r--r--. 1 boinc boinc    576529 Nov 20 12:09 pilot3.tar.gz
[2025-11-24 01:50:27] -rw-r--r--. 1 boinc boinc      5112 Nov 20 12:37 queuedata.json
[2025-11-24 01:50:27] -rwx------. 1 boinc boinc     36292 Nov 20 12:38 runpilot2-wrapper.sh
[2025-11-24 01:50:27] -rw-r--r--. 1 boinc boinc       100 Nov 22 23:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 01:50:27] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 23:58 run_atlas
[2025-11-24 01:50:27] -rw-r--r--. 1 boinc boinc       105 Nov 22 23:58 job.xml
[2025-11-24 01:50:27] -rw-r--r--. 2 boinc boinc 408023179 Nov 22 23:58 EVNT.47493127._000355.pool.root.1
[2025-11-24 01:50:27] -rw-r--r--. 1 boinc boinc      6392 Nov 22 23:58 init_data.xml
[2025-11-24 01:50:27] -rw-r--r--. 2 boinc boinc     15847 Nov 22 23:58 start_atlas.sh
[2025-11-24 01:50:27] drwxrwx--x. 2 boinc boinc        68 Nov 22 23:58 shared
[2025-11-24 01:50:27] -rw-r--r--. 2 boinc boinc    590102 Nov 22 23:58 input.tar.gz
[2025-11-24 01:50:27] -rw-r--r--. 1 boinc boinc         0 Nov 22 23:58 boinc_lockfile
[2025-11-24 01:50:27] -rw-r--r--. 1 boinc boinc      2785 Nov 22 23:58 pandaJob.out
[2025-11-24 01:50:27] -rw-------. 1 boinc boinc    989784 Nov 23 00:02 agis_schedconf.cvmfs.json
[2025-11-24 01:50:27] drwx------. 5 boinc boinc      4096 Nov 23 00:02 pilot3
[2025-11-24 01:50:27] -rw-r--r--. 1 boinc boinc       533 Nov 24 01:16 boinc_task_state.xml
[2025-11-24 01:50:27] -rw-------. 1 boinc boinc 912296397 Nov 24 01:46 HITS.47523449._003547.pool.root.1
[2025-11-24 01:50:27] -rw-------. 1 boinc boinc      1030 Nov 24 01:47 memory_monitor_summary.json
[2025-11-24 01:50:27] -rw-------. 1 boinc boinc   1526164 Nov 24 01:47 agis_ddmendpoints.agis.ALL.json
[2025-11-24 01:50:27] -rw-------. 1 boinc boinc   2578081 Nov 24 01:47 log.47523449._003547.job.log.tgz.1
[2025-11-24 01:50:27] -rw-------. 1 boinc boinc      8629 Nov 24 01:49 heartbeat.json
[2025-11-24 01:50:27] -rw-------. 1 boinc boinc        95 Nov 24 01:49 pilot_heartbeat.json
[2025-11-24 01:50:27] -rw-r--r--. 1 boinc boinc        29 Nov 24 01:50 wrapper_checkpoint.txt
[2025-11-24 01:50:27] -rw-r--r--. 1 boinc boinc      8192 Nov 24 01:50 boinc_mmap_file
[2025-11-24 01:50:27] -rw-------. 1 boinc boinc      4884 Nov 24 01:50 pilotlog.txt
[2025-11-24 01:50:27] -rw-------. 1 boinc boinc  12360330 Nov 24 01:50 log.47523449._003547.job.log.1
[2025-11-24 01:50:27] -rw-------. 1 boinc boinc       353 Nov 24 01:50 output.list
[2025-11-24 01:50:27] -rw-r--r--. 1 boinc boinc       620 Nov 24 01:50 runtime_log
[2025-11-24 01:50:27] -rw-------. 1 boinc boinc  14960640 Nov 24 01:50 result.tar.gz
[2025-11-24 01:50:27] -rw-r--r--. 1 boinc boinc      8817 Nov 24 01:50 runtime_log.err
[2025-11-24 01:50:27] -rw-------. 1 boinc boinc       662 Nov 24 01:50 I6uLDmYAIg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlYGKDmxZAsPo.diag
[2025-11-24 01:50:27] -rw-r--r--. 1 boinc boinc     21533 Nov 24 01:50 stderr.txt
[2025-11-24 01:50:27] HITS file was successfully produced:
[2025-11-24 01:50:27] -rw-------. 1 boinc boinc 912296397 Nov 24 01:46 shared/HITS.pool.root.1
[2025-11-24 01:50:27]  *** Contents of shared directory: ***
[2025-11-24 01:50:27] total 1304588
[2025-11-24 01:50:27] -rw-r--r--. 2 boinc boinc 408023179 Nov 22 23:58 ATLAS.root_0
[2025-11-24 01:50:27] -rw-r--r--. 2 boinc boinc     15847 Nov 22 23:58 start_atlas.sh
[2025-11-24 01:50:27] -rw-r--r--. 2 boinc boinc    590102 Nov 22 23:58 input.tar.gz
[2025-11-24 01:50:27] -rw-------. 1 boinc boinc 912296397 Nov 24 01:46 HITS.pool.root.1
[2025-11-24 01:50:27] -rw-------. 1 boinc boinc  14960640 Nov 24 01:50 result.tar.gz
01:50:29 (19298): run_atlas exited; CPU time 336058.919386
01:50:29 (19298): called boinc_finish(0)

</stderr_txt>
]]>

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