Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:01:10 (4587): wrapper (7.7.26015): starting
02:01:10 (4587): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 02:01:10] Arguments: --nthreads 8
[2025-11-23 02:01:10] Threads: 8
[2025-11-23 02:01:10] Checking for CVMFS
[2025-11-23 02:01:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 02:01:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 02:01:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 02:01:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 02:01:12] 2.11.2.0 14280 280200 141252 153191 0 239 24908624 25165824 4251 130560 2 149896987 99.892 78838990 3070 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-23 02:01:12] CVMFS is ok
[2025-11-23 02:01:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 02:01:12] Checking for apptainer binary...
[2025-11-23 02:01:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 02:01:12] Running /usr/bin/apptainer --version
[2025-11-23 02:01:12] apptainer version 1.3.2-1.el7
[2025-11-23 02:01:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 02:01:21] cg-vwn302.simple-grid.lan
[2025-11-23 02:01:21] apptainer works
[2025-11-23 02:01:21] Set ATHENA_PROC_NUMBER=8
[2025-11-23 02:01:21] Set ATHENA_CORE_NUMBER=8
[2025-11-23 02:01:21] Starting ATLAS job with PandaID=6893851175
[2025-11-23 02:01:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 03:12:10]  *** The last 200 lines of the pilot log: ***
[2025-11-24 03:12:10] 2025-11-24 02:11:32,093 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 03:12:10] 2025-11-24 02:11:32,095 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.9959999999996
[2025-11-24 03:12:10] 2025-11-24 02:11:32,097 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6893851175/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 03:12:10] 2025-11-24 02:11:32,098 | INFO     | extracted standard info from prmon json
[2025-11-24 03:12:10] 2025-11-24 02:11:32,098 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 03:12:10] 2025-11-24 02:11:32,098 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 03:12:10] 2025-11-24 02:11:32,128 | INFO     | fitting pss+swap vs Time
[2025-11-24 03:12:10] 2025-11-24 02:11:32,130 | INFO     | sum of square deviations: 993049369989.0293
[2025-11-24 03:12:10] 2025-11-24 02:11:32,214 | INFO     | sum of deviations: 4034765327599.5205
[2025-11-24 03:12:10] 2025-11-24 02:11:32,214 | INFO     | mean x: 1763905277.7170963
[2025-11-24 03:12:10] 2025-11-24 02:11:32,214 | INFO     | mean y: 2868414.6343283583
[2025-11-24 03:12:10] 2025-11-24 02:11:32,214 | INFO     | intersect: -7163888919.677629
[2025-11-24 03:12:10] 2025-11-24 02:11:32,216 | INFO     | chi2: 9.558405277188866
[2025-11-24 03:12:10] 2025-11-24 02:11:32,219 | INFO     | sum of square deviations: 982978500409.0969
[2025-11-24 03:12:10] 2025-11-24 02:11:32,292 | INFO     | sum of deviations: 4515976434402.212
[2025-11-24 03:12:10] 2025-11-24 02:11:32,292 | INFO     | mean x: 1763905125.2212389
[2025-11-24 03:12:10] 2025-11-24 02:11:32,293 | INFO     | mean y: 2875702.4547311096
[2025-11-24 03:12:10] 2025-11-24 02:11:32,293 | INFO     | intersect: -8100815247.759543
[2025-11-24 03:12:10] 2025-11-24 02:11:32,295 | INFO     | chi2: 6.600856860552154
[2025-11-24 03:12:10] 2025-11-24 02:11:32,295 | INFO     | current chi2=6.600856860552154 (change=30.94186039270485 %)
[2025-11-24 03:12:10] 2025-11-24 02:11:32,297 | INFO     | sum of square deviations: 972975868328.0658
[2025-11-24 03:12:10] 2025-11-24 02:11:32,346 | INFO     | time since job start (90429s) is within the limit (172800.0s)
[2025-11-24 03:12:10] 2025-11-24 02:11:32,374 | INFO     | sum of deviations: 4749441045837.199
[2025-11-24 03:12:10] 2025-11-24 02:11:32,374 | INFO     | mean x: 1763904972.7247267
[2025-11-24 03:12:10] 2025-11-24 02:11:32,374 | INFO     | mean y: 2879256.3975409837
[2025-11-24 03:12:10] 2025-11-24 02:11:32,375 | INFO     | intersect: -8607367874.20286
[2025-11-24 03:12:10] 2025-11-24 02:11:32,377 | INFO     | chi2: 5.352322657167912
[2025-11-24 03:12:10] 2025-11-24 02:11:32,377 | INFO     | current chi2=5.352322657167912 (change=18.914729250465882 %)
[2025-11-24 03:12:10] 2025-11-24 02:11:32,377 | INFO     | right removable region: 1463
[2025-11-24 03:12:10] 2025-11-24 02:11:32,379 | INFO     | sum of square deviations: 982977406069.0975
[2025-11-24 03:12:10] 2025-11-24 02:11:32,440 | INFO     | sum of deviations: 3456144663507.196
[2025-11-24 03:12:10] 2025-11-24 02:11:32,441 | INFO     | mean x: 1763905430.2212389
[2025-11-24 03:12:10] 2025-11-24 02:11:32,441 | INFO     | mean y: 2877174.7562968004
[2025-11-24 03:12:10] 2025-11-24 02:11:32,441 | INFO     | intersect: -6199007326.302076
[2025-11-24 03:12:10] 2025-11-24 02:11:32,443 | INFO     | chi2: 5.5562613012712205
[2025-11-24 03:12:10] 2025-11-24 02:11:32,443 | INFO     | current chi2=5.5562613012712205 (change=41.870415198534864 %)
[2025-11-24 03:12:10] 2025-11-24 02:11:32,446 | INFO     | sum of square deviations: 972973947866.5138
[2025-11-24 03:12:10] 2025-11-24 02:11:32,507 | INFO     | sum of deviations: 3180569023674.0625
[2025-11-24 03:12:10] 2025-11-24 02:11:32,507 | INFO     | mean x: 1763905582.7240436
[2025-11-24 03:12:10] 2025-11-24 02:11:32,507 | INFO     | mean y: 2881372.1659836066
[2025-11-24 03:12:10] 2025-11-24 02:11:32,508 | INFO     | intersect: -5763175847.967858
[2025-11-24 03:12:10] 2025-11-24 02:11:32,510 | INFO     | chi2: 4.555465615547857
[2025-11-24 03:12:10] 2025-11-24 02:11:32,510 | INFO     | current chi2=4.555465615547857 (change=18.012034198146708 %)
[2025-11-24 03:12:10] 2025-11-24 02:11:32,510 | INFO     | left removable region: 20
[2025-11-24 03:12:10] 2025-11-24 02:11:32,512 | INFO     | sum of square deviations: 931702937144.692
[2025-11-24 03:12:10] 2025-11-24 02:11:32,574 | INFO     | sum of deviations: 3702040870299.5605
[2025-11-24 03:12:10] 2025-11-24 02:11:32,574 | INFO     | mean x: 1763905552.2314622
[2025-11-24 03:12:10] 2025-11-24 02:11:32,575 | INFO     | mean y: 2895461.133056133
[2025-11-24 03:12:10] 2025-11-24 02:11:32,575 | INFO     | intersect: -7005830373.435267
[2025-11-24 03:12:10] 2025-11-24 02:11:32,577 | INFO     | chi2: 0.2050715897453428
[2025-11-24 03:12:10] 2025-11-24 02:11:32,577 | INFO     | current memory leak: 3.97 B/s (using 1443 data points, chi2=0.21)
[2025-11-24 03:12:10] 2025-11-24 02:11:32,580 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-24 03:12:10] 2025-11-24 02:11:32,580 | INFO     | ..............................
[2025-11-24 03:12:10] 2025-11-24 02:11:32,580 | INFO     | . Timing measurements:
[2025-11-24 03:12:10] 2025-11-24 02:11:32,580 | INFO     | . get job = 0 s
[2025-11-24 03:12:10] 2025-11-24 02:11:32,580 | INFO     | . initial setup = 18 s
[2025-11-24 03:12:10] 2025-11-24 02:11:32,580 | INFO     | . payload setup = 154 s
[2025-11-24 03:12:10] 2025-11-24 02:11:32,580 | INFO     | . stage-in = 0 s
[2025-11-24 03:12:10] 2025-11-24 02:11:32,580 | INFO     | . payload execution = 90036 s
[2025-11-24 03:12:10] 2025-11-24 02:11:32,581 | INFO     | . stage-out = 4 s
[2025-11-24 03:12:10] 2025-11-24 02:11:32,581 | INFO     | . log creation = 1 s
[2025-11-24 03:12:10] 2025-11-24 02:11:32,581 | INFO     | ..............................
[2025-11-24 03:12:10] 2025-11-24 02:11:32,710 | INFO     | 
[2025-11-24 03:12:10] 2025-11-24 02:11:32,711 | INFO     | job summary report
[2025-11-24 03:12:10] 2025-11-24 02:11:32,711 | INFO     | --------------------------------------------------
[2025-11-24 03:12:10] 2025-11-24 02:11:32,711 | INFO     | PanDA job id: 6893851175
[2025-11-24 03:12:10] 2025-11-24 02:11:32,711 | INFO     | task id: 47523449
[2025-11-24 03:12:10] 2025-11-24 02:11:32,711 | INFO     | errors: (none)
[2025-11-24 03:12:10] 2025-11-24 02:11:32,711 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 03:12:10] 2025-11-24 02:11:32,711 | INFO     | pilot state: finished 
[2025-11-24 03:12:10] 2025-11-24 02:11:32,712 | INFO     | transexitcode: 0
[2025-11-24 03:12:10] 2025-11-24 02:11:32,712 | INFO     | exeerrorcode: 0
[2025-11-24 03:12:10] 2025-11-24 02:11:32,712 | INFO     | exeerrordiag: 
[2025-11-24 03:12:10] 2025-11-24 02:11:32,712 | INFO     | exitcode: 0
[2025-11-24 03:12:10] 2025-11-24 02:11:32,712 | INFO     | exitmsg: OK
[2025-11-24 03:12:10] 2025-11-24 02:11:32,712 | INFO     | cpuconsumptiontime: 337446 s
[2025-11-24 03:12:10] 2025-11-24 02:11:32,712 | INFO     | nevents: 1000
[2025-11-24 03:12:10] 2025-11-24 02:11:32,712 | INFO     | neventsw: 0
[2025-11-24 03:12:10] 2025-11-24 02:11:32,712 | INFO     | pid: 15309
[2025-11-24 03:12:10] 2025-11-24 02:11:32,712 | INFO     | pgrp: 15309
[2025-11-24 03:12:10] 2025-11-24 02:11:32,712 | INFO     | corecount: 8
[2025-11-24 03:12:10] 2025-11-24 02:11:32,713 | INFO     | event service: False
[2025-11-24 03:12:10] 2025-11-24 02:11:32,713 | INFO     | sizes: {0: 2298635, 1: 2298834, 12: 2298834, 23: 2298862, 34: 2298890, 45: 2298918, 55: 2299074, 66: 2299102, 77: 2299130, 88: 2299186, 98: 2299214, 104: 2299784, 
[2025-11-24 03:12:10] 2025-11-24 02:11:32,713 | INFO     | --------------------------------------------------
[2025-11-24 03:12:10] 2025-11-24 02:11:32,713 | INFO     | 
[2025-11-24 03:12:10] 2025-11-24 02:11:32,713 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-24 03:12:10] 2025-11-24 02:11:32,785 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 03:12:10] 2025-11-24 02:11:32,785 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 03:12:10] 2025-11-24 02:11:32,785 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 03:12:10] 2025-11-24 02:11:32,785 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 03:12:10] 2025-11-24 02:11:32,785 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 03:12:10] 2025-11-24 02:11:32,786 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 03:12:10] 2025-11-24 02:11:32,786 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 03:12:10] 2025-11-24 02:11:32,786 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 03:12:10] 2025-11-24 02:11:32,786 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 03:12:10] 2025-11-24 02:11:32,786 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 03:12:10] 2025-11-24 02:11:32,786 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 03:12:10] 2025-11-24 02:11:32,786 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 03:12:10] 2025-11-24 02:11:32,786 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 03:12:10] 2025-11-24 02:11:32,786 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 03:12:10] 2025-11-24 02:11:32,787 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 03:12:10] 2025-11-24 02:11:32,787 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 03:12:10] 2025-11-24 02:11:32,787 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 03:12:10] 2025-11-24 02:11:32,787 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 03:12:10] 2025-11-24 02:11:32,787 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 03:12:10] 2025-11-24 02:11:32,787 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 03:12:10] 2025-11-24 02:11:32,788 | INFO     | job 6893851175 has completed (purged errors)
[2025-11-24 03:12:10] 2025-11-24 02:11:32,788 | INFO     | overall cleanup function is called
[2025-11-24 03:12:10] 2025-11-24 02:11:33,807 | INFO     | --- collectZombieJob: --- 10, [15309]
[2025-11-24 03:12:10] 2025-11-24 02:11:33,808 | INFO     | zombie collector waiting for pid 15309
[2025-11-24 03:12:10] 2025-11-24 02:11:33,808 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 03:12:10] 2025-11-24 02:11:33,808 | INFO     | collected zombie processes
[2025-11-24 03:12:10] 2025-11-24 02:11:33,808 | INFO     | will attempt to kill all subprocesses of pid=15309
[2025-11-24 03:12:10] 2025-11-24 02:11:33,918 | INFO     | process IDs to be killed: [15309] (in reverse order)
[2025-11-24 03:12:10] 2025-11-24 02:11:34,447 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 03:12:10] 2025-11-24 02:11:34,448 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 03:12:10] 2025-11-24 02:11:34,451 | INFO     | did not find any defunct processes belonging to 15309
[2025-11-24 03:12:10] 2025-11-24 02:11:34,455 | INFO     | did not find any defunct processes belonging to 15309
[2025-11-24 03:12:10] 2025-11-24 02:11:34,509 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 03:12:10] 2025-11-24 02:11:34,509 | INFO     | ready for new job
[2025-11-24 03:12:10] 2025-11-24 02:11:34,509 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 03:12:10] 2025-11-24 02:11:34,516 | INFO     | ***************************************
[2025-11-24 03:12:10] 2025-11-24 02:11:34,516 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 03:12:10] 2025-11-24 02:11:34,516 | INFO     | ***************************************
[2025-11-24 03:12:10] 2025-11-24 02:11:34,517 | INFO     | 
[2025-11-24 03:12:10] 2025-11-24 02:11:34,517 | INFO     | pilot is running in a VM
[2025-11-24 03:12:10] 2025-11-24 02:11:34,517 | INFO     | architecture information:
[2025-11-24 03:12:10] 2025-11-24 02:11:34,529 | INFO     | executing command: cat /etc/os-release
[2025-11-24 03:12:10] 2025-11-24 02:11:34,651 | INFO     | cat /etc/os-release:
[2025-11-24 03:12:10] NAME="CentOS Linux"
[2025-11-24 03:12:10] VERSION="7 (Core)"
[2025-11-24 03:12:10] ID="centos"
[2025-11-24 03:12:10] ID_LIKE="rhel fedora"
[2025-11-24 03:12:10] VERSION_ID="7"
[2025-11-24 03:12:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 03:12:10] ANSI_COLOR="0;31"
[2025-11-24 03:12:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 03:12:10] HOME_URL="https://www.centos.org/"
[2025-11-24 03:12:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 03:12:10] 
[2025-11-24 03:12:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 03:12:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 03:12:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 03:12:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 03:12:10] 
[2025-11-24 03:12:10] 2025-11-24 02:11:34,651 | INFO     | ***************************************
[2025-11-24 03:12:10] 2025-11-24 02:11:35,154 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-24 03:12:10] 2025-11-24 02:11:35,484 | INFO     | sufficient remaining disk space (495115567104 B)
[2025-11-24 03:12:10] 2025-11-24 02:11:35,485 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 03:12:10] 2025-11-24 02:11:35,485 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 03:12:10] 2025-11-24 02:11:35,485 | INFO     | update_server=False
[2025-11-24 03:12:10] 2025-11-24 02:11:35,485 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 03:12:10] 2025-11-24 02:11:35,485 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 03:12:10] 2025-11-24 02:11:35,485 | INFO     | aborting loop
[2025-11-24 03:12:10] 2025-11-24 02:11:35,490 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 03:12:10] 2025-11-24 02:11:35,541 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 03:12:10] 2025-11-24 02:11:36,154 | INFO     | all data control threads have been joined
[2025-11-24 03:12:10] 2025-11-24 02:11:36,255 | INFO     | all payload control threads have been joined
[2025-11-24 03:12:10] 2025-11-24 02:11:36,493 | INFO     | [job] job monitor thread has finished
[2025-11-24 03:12:10] 2025-11-24 02:11:36,493 | INFO     | [job] retrieve thread has finished
[2025-11-24 03:12:10] 2025-11-24 02:11:36,565 | INFO     | [job] validate thread has finished
[2025-11-24 03:12:10] 2025-11-24 02:11:36,867 | INFO     | all job control threads have been joined
[2025-11-24 03:12:10] 2025-11-24 02:11:36,951 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 03:12:10] 2025-11-24 02:11:37,055 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 03:12:10] 2025-11-24 02:11:37,160 | INFO     | [data] control thread has finished
[2025-11-24 03:12:10] 2025-11-24 02:11:37,261 | INFO     | [payload] control thread has finished
[2025-11-24 03:12:10] 2025-11-24 02:11:37,275 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 03:12:10] 2025-11-24 02:11:37,303 | INFO     | [payload] validate_post thread has finished
[2025-11-24 03:12:10] 2025-11-24 02:11:37,306 | INFO     | [payload] failed_post thread has finished
[2025-11-24 03:12:10] 2025-11-24 02:11:37,497 | INFO     | [data] copytool_out thread has finished
[2025-11-24 03:12:10] 2025-11-24 02:11:37,539 | INFO     | [data] copytool_in thread has finished
[2025-11-24 03:12:10] 2025-11-24 02:11:37,724 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 03:12:10] 2025-11-24 02:11:37,873 | INFO     | [job] control thread has finished
[2025-11-24 03:12:10] 2025-11-24 02:11:38,730 | INFO     | [job] queue monitor thread has finished
[2025-11-24 03:12:10] 2025-11-24 02:11:39,550 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 03:12:10] 2025-11-24 02:11:46,067 | INFO     | job.realtimelogging is not enabled
[2025-11-24 03:12:10] 2025-11-24 02:11:47,075 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 03:12:10] 2025-11-24 02:12:01,224 | INFO     | [monitor] cgroup control has ended
[2025-11-24 03:12:10] 2025-11-24 02:12:02,184 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140591339214656)>', '<ExcThread(monitor, started 140590427653888)>']
[2025-11-24 03:12:10] 2025-11-24 02:12:05,540 | INFO     | PID=8617 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-24 03:12:10] 2025-11-24 02:12:05,540 | INFO     | .. there are 9 such processes running
[2025-11-24 03:12:10] 2025-11-24 02:12:05,540 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 03:12:10] 2025-11-24 02:12:05,540 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 03:12:10] 2025-11-24 02:12:05,540 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 03:12:10] 2025-11-24 02:12:05,541 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 03:12:10] 2025-11-24 02:12:05,541 | INFO     | [monitor] control thread has ended
[2025-11-24 03:12:10] 2025-11-24 02:12:07,209 | INFO     | all workflow threads have been joined
[2025-11-24 03:12:10] 2025-11-24 02:12:07,210 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 03:12:10] 2025-11-24 02:12:07,210 | INFO     | traces error code: 0
[2025-11-24 03:12:10] 2025-11-24 02:12:07,211 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 03:12:10] 2025-11-24 02:12:07,463 [wrapper] ==== pilot stdout END ====
[2025-11-24 03:12:10] 2025-11-24 02:12:07,525 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 03:12:10] 2025-11-24 02:12:07,530 [wrapper] pilotpid: 8617
[2025-11-24 03:12:10] 2025-11-24 02:12:07,656 [wrapper] Pilot exit status: 0
[2025-11-24 03:12:10] 2025-11-24 02:12:08,034 [wrapper] pandaids: 6893851175
[2025-11-24 03:12:10] 2025-11-24 02:12:09,158 [wrapper] cleanup supervisor_pilot 28704 8618
[2025-11-24 03:12:10] 2025-11-24 02:12:09,254 [wrapper] Test setup, not cleaning
[2025-11-24 03:12:10] 2025-11-24 02:12:09,368 [wrapper] apfmon messages muted
[2025-11-24 03:12:10] 2025-11-24 02:12:09,402 [wrapper] ==== wrapper stdout END ====
[2025-11-24 03:12:10] 2025-11-24 02:12:09,418 [wrapper] ==== wrapper stderr END ====
[2025-11-24 03:12:10]  *** Error codes and diagnostics ***
[2025-11-24 03:12:10]     "exeErrorCode": 0,
[2025-11-24 03:12:10]     "exeErrorDiag": "",
[2025-11-24 03:12:10]     "pilotErrorCode": 0,
[2025-11-24 03:12:10]     "pilotErrorDiag": "",
[2025-11-24 03:12:10]  *** Listing of results directory ***
[2025-11-24 03:12:10] total 1324448
[2025-11-24 03:12:10] -rw-r--r--. 1 boinc boinc    576529 Nov 20 12:09 pilot3.tar.gz
[2025-11-24 03:12:10] -rw-r--r--. 1 boinc boinc      5112 Nov 20 12:32 queuedata.json
[2025-11-24 03:12:10] -rwx------. 1 boinc boinc     36292 Nov 20 12:33 runpilot2-wrapper.sh
[2025-11-24 03:12:10] -rw-r--r--. 1 boinc boinc       100 Nov 23 02:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 03:12:10] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 02:01 run_atlas
[2025-11-24 03:12:10] -rw-r--r--. 1 boinc boinc       105 Nov 23 02:01 job.xml
[2025-11-24 03:12:10] -rw-r--r--. 2 boinc boinc 409662996 Nov 23 02:01 EVNT.47493127._000349.pool.root.1
[2025-11-24 03:12:10] -rw-r--r--. 1 boinc boinc      6391 Nov 23 02:01 init_data.xml
[2025-11-24 03:12:10] -rw-r--r--. 2 boinc boinc     15847 Nov 23 02:01 start_atlas.sh
[2025-11-24 03:12:10] drwxrwx--x. 2 boinc boinc        68 Nov 23 02:01 shared
[2025-11-24 03:12:10] -rw-r--r--. 2 boinc boinc    590103 Nov 23 02:01 input.tar.gz
[2025-11-24 03:12:10] -rw-r--r--. 1 boinc boinc         0 Nov 23 02:01 boinc_lockfile
[2025-11-24 03:12:10] -rw-r--r--. 1 boinc boinc      2785 Nov 23 02:01 pandaJob.out
[2025-11-24 03:12:10] -rw-------. 1 boinc boinc    989784 Nov 23 02:04 agis_schedconf.cvmfs.json
[2025-11-24 03:12:10] drwx------. 5 boinc boinc      4096 Nov 23 02:04 pilot3
[2025-11-24 03:12:10] -rw-r--r--. 1 boinc boinc       533 Nov 24 02:59 boinc_task_state.xml
[2025-11-24 03:12:10] -rw-------. 1 boinc boinc 913539052 Nov 24 03:10 HITS.47523449._003490.pool.root.1
[2025-11-24 03:12:10] -rw-------. 1 boinc boinc      1029 Nov 24 03:10 memory_monitor_summary.json
[2025-11-24 03:12:10] -rw-------. 1 boinc boinc   1526164 Nov 24 03:10 agis_ddmendpoints.agis.ALL.json
[2025-11-24 03:12:10] -rw-------. 1 boinc boinc   2547796 Nov 24 03:11 log.47523449._003490.job.log.tgz.1
[2025-11-24 03:12:10] -rw-------. 1 boinc boinc        95 Nov 24 03:11 pilot_heartbeat.json
[2025-11-24 03:12:10] -rw-------. 1 boinc boinc      8628 Nov 24 03:11 heartbeat.json
[2025-11-24 03:12:10] -rw-r--r--. 1 boinc boinc      8192 Nov 24 03:12 boinc_mmap_file
[2025-11-24 03:12:10] -rw-r--r--. 1 boinc boinc        29 Nov 24 03:12 wrapper_checkpoint.txt
[2025-11-24 03:12:10] -rw-------. 1 boinc boinc      4955 Nov 24 03:12 pilotlog.txt
[2025-11-24 03:12:10] -rw-------. 1 boinc boinc  12015554 Nov 24 03:12 log.47523449._003490.job.log.1
[2025-11-24 03:12:10] -rw-------. 1 boinc boinc       353 Nov 24 03:12 output.list
[2025-11-24 03:12:10] -rw-r--r--. 1 boinc boinc       620 Nov 24 03:12 runtime_log
[2025-11-24 03:12:10] -rw-------. 1 boinc boinc  14581760 Nov 24 03:12 result.tar.gz
[2025-11-24 03:12:10] -rw-r--r--. 1 boinc boinc      8817 Nov 24 03:12 runtime_log.err
[2025-11-24 03:12:10] -rw-------. 1 boinc boinc       662 Nov 24 03:12 J2FODmb5Hg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm0dHKDmSyFL1n.diag
[2025-11-24 03:12:10] -rw-r--r--. 1 boinc boinc     20973 Nov 24 03:12 stderr.txt
[2025-11-24 03:12:10] HITS file was successfully produced:
[2025-11-24 03:12:10] -rw-------. 1 boinc boinc 913539052 Nov 24 03:10 shared/HITS.pool.root.1
[2025-11-24 03:12:10]  *** Contents of shared directory: ***
[2025-11-24 03:12:10] total 1307028
[2025-11-24 03:12:10] -rw-r--r--. 2 boinc boinc 409662996 Nov 23 02:01 ATLAS.root_0
[2025-11-24 03:12:10] -rw-r--r--. 2 boinc boinc     15847 Nov 23 02:01 start_atlas.sh
[2025-11-24 03:12:10] -rw-r--r--. 2 boinc boinc    590103 Nov 23 02:01 input.tar.gz
[2025-11-24 03:12:10] -rw-------. 1 boinc boinc 913539052 Nov 24 03:10 HITS.pool.root.1
[2025-11-24 03:12:10] -rw-------. 1 boinc boinc  14581760 Nov 24 03:12 result.tar.gz
03:12:12 (4587): run_atlas exited; CPU time 338044.660757
03:12:12 (4587): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN