Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:45:33 (2282): wrapper (7.7.26015): starting
01:45:33 (2282): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 01:45:33] Arguments: --nthreads 8
[2025-11-23 01:45:33] Threads: 8
[2025-11-23 01:45:33] Checking for CVMFS
[2025-11-23 01:45:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 01:45:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 01:45:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 01:45:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 01:45:34] 2.11.2.0 28641 280200 158052 153191 2 220 20899312 25165825 3807 130560 218 124370078 99.878 71457365 2756 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-23 01:45:34] CVMFS is ok
[2025-11-23 01:45:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 01:45:34] Checking for apptainer binary...
[2025-11-23 01:45:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 01:45:34] Running /usr/bin/apptainer --version
[2025-11-23 01:45:34] apptainer version 1.3.2-1.el7
[2025-11-23 01:45:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 01:45:35] cg-vwn402.simple-grid.lan
[2025-11-23 01:45:35] apptainer works
[2025-11-23 01:45:35] Set ATHENA_PROC_NUMBER=8
[2025-11-23 01:45:35] Set ATHENA_CORE_NUMBER=8
[2025-11-23 01:45:35] Starting ATLAS job with PandaID=6893838730
[2025-11-23 01:45:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 03:30:52]  *** The last 200 lines of the pilot log: ***
[2025-11-24 03:30:52] 2025-11-24 02:29:58,339 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 03:30:52] 2025-11-24 02:29:59,542 | INFO     | time since job start (92639s) is within the limit (172800.0s)
[2025-11-24 03:30:52] 2025-11-24 02:30:00,848 | INFO     | monitor loop #6178: job 0:6893838730 is in state 'finished'
[2025-11-24 03:30:52] 2025-11-24 02:30:00,849 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 03:30:52] 2025-11-24 02:30:01,550 | INFO     | time since job start (92641s) is within the limit (172800.0s)
[2025-11-24 03:30:52] 2025-11-24 02:30:02,800 | INFO     | PID=6051 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-24 03:30:52] 2025-11-24 02:30:02,800 | INFO     | .. there are 9 such processes running
[2025-11-24 03:30:52] 2025-11-24 02:30:03,354 | INFO     | monitor loop #6179: job 0:6893838730 is in state 'finished'
[2025-11-24 03:30:52] 2025-11-24 02:30:03,354 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 03:30:52] 2025-11-24 02:30:03,801 | INFO     | time since job start (92643s) is within the limit (172800.0s)
[2025-11-24 03:30:52] 2025-11-24 02:30:05,808 | INFO     | time since job start (92645s) is within the limit (172800.0s)
[2025-11-24 03:30:52] 2025-11-24 02:30:05,860 | INFO     | monitor loop #6180: job 0:6893838730 is in state 'finished'
[2025-11-24 03:30:52] 2025-11-24 02:30:05,861 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 03:30:52] 2025-11-24 02:30:07,819 | INFO     | time since job start (92647s) is within the limit (172800.0s)
[2025-11-24 03:30:52] 2025-11-24 02:30:08,218 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 03:30:52] 2025-11-24 02:30:08,219 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-24 03:30:52] 2025-11-24 02:30:08,221 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6893838730/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 03:30:52] 2025-11-24 02:30:08,222 | INFO     | extracted standard info from prmon json
[2025-11-24 03:30:52] 2025-11-24 02:30:08,222 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 03:30:52] 2025-11-24 02:30:08,223 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 03:30:52] 2025-11-24 02:30:08,253 | INFO     | fitting pss+swap vs Time
[2025-11-24 03:30:52] 2025-11-24 02:30:08,256 | INFO     | sum of square deviations: 1082517188162.125
[2025-11-24 03:30:52] 2025-11-24 02:30:08,333 | INFO     | sum of deviations: 2135381378381.1934
[2025-11-24 03:30:52] 2025-11-24 02:30:08,333 | INFO     | mean x: 1763905059.3164139
[2025-11-24 03:30:52] 2025-11-24 02:30:08,333 | INFO     | mean y: 2855404.4620962427
[2025-11-24 03:30:52] 2025-11-24 02:30:08,333 | INFO     | intersect: -3476636707.151869
[2025-11-24 03:30:52] 2025-11-24 02:30:08,335 | INFO     | chi2: 20.441100853944164
[2025-11-24 03:30:52] 2025-11-24 02:30:08,338 | INFO     | sum of square deviations: 1071849169298.4281
[2025-11-24 03:30:52] 2025-11-24 02:30:08,371 | INFO     | monitor loop #6181: job 0:6893838730 is in state 'finished'
[2025-11-24 03:30:52] 2025-11-24 02:30:08,371 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 03:30:52] 2025-11-24 02:30:08,425 | INFO     | sum of deviations: 2637568280229.6543
[2025-11-24 03:30:52] 2025-11-24 02:30:08,435 | INFO     | mean x: 1763904906.8207672
[2025-11-24 03:30:52] 2025-11-24 02:30:08,435 | INFO     | mean y: 2862581.6924603176
[2025-11-24 03:30:52] 2025-11-24 02:30:08,435 | INFO     | intersect: -4337691821.700986
[2025-11-24 03:30:52] 2025-11-24 02:30:08,437 | INFO     | chi2: 17.15389427870937
[2025-11-24 03:30:52] 2025-11-24 02:30:08,437 | INFO     | current chi2=17.15389427870937 (change=16.08135784233225 %)
[2025-11-24 03:30:52] 2025-11-24 02:30:08,437 | INFO     | right removable region: 1511
[2025-11-24 03:30:52] 2025-11-24 02:30:08,439 | INFO     | sum of square deviations: 1071847951128.4282
[2025-11-24 03:30:52] 2025-11-24 02:30:08,518 | INFO     | sum of deviations: 1652267383004.1953
[2025-11-24 03:30:52] 2025-11-24 02:30:08,519 | INFO     | mean x: 1763905211.8207672
[2025-11-24 03:30:52] 2025-11-24 02:30:08,519 | INFO     | mean y: 2862307.2996031744
[2025-11-24 03:30:52] 2025-11-24 02:30:08,519 | INFO     | intersect: -2716220231.538364
[2025-11-24 03:30:52] 2025-11-24 02:30:08,521 | INFO     | chi2: 17.809425128624053
[2025-11-24 03:30:52] 2025-11-24 02:30:08,521 | INFO     | current chi2=17.809425128624053 (change=12.874432468798872 %)
[2025-11-24 03:30:52] 2025-11-24 02:30:08,521 | INFO     | left removable region: 10
[2025-11-24 03:30:52] 2025-11-24 02:30:08,523 | INFO     | sum of square deviations: 1048624773668.387
[2025-11-24 03:30:52] 2025-11-24 02:30:08,657 | INFO     | sum of deviations: 2116944724604.166
[2025-11-24 03:30:52] 2025-11-24 02:30:08,657 | INFO     | mean x: 1763905181.3271153
[2025-11-24 03:30:52] 2025-11-24 02:30:08,657 | INFO     | mean y: 2872882.0892738174
[2025-11-24 03:30:52] 2025-11-24 02:30:08,657 | INFO     | intersect: -3558066990.854492
[2025-11-24 03:30:52] 2025-11-24 02:30:08,659 | INFO     | chi2: 13.729557578143513
[2025-11-24 03:30:52] 2025-11-24 02:30:08,664 | INFO     | current memory leak: 2.02 B/s (using 1501 data points, chi2=13.73)
[2025-11-24 03:30:52] 2025-11-24 02:30:08,672 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-24 03:30:52] 2025-11-24 02:30:08,673 | INFO     | ..............................
[2025-11-24 03:30:52] 2025-11-24 02:30:08,673 | INFO     | . Timing measurements:
[2025-11-24 03:30:52] 2025-11-24 02:30:08,673 | INFO     | . get job = 0 s
[2025-11-24 03:30:52] 2025-11-24 02:30:08,673 | INFO     | . initial setup = 2 s
[2025-11-24 03:30:52] 2025-11-24 02:30:08,673 | INFO     | . payload setup = 13 s
[2025-11-24 03:30:52] 2025-11-24 02:30:08,673 | INFO     | . stage-in = 0 s
[2025-11-24 03:30:52] 2025-11-24 02:30:08,673 | INFO     | . payload execution = 92509 s
[2025-11-24 03:30:52] 2025-11-24 02:30:08,673 | INFO     | . stage-out = 7 s
[2025-11-24 03:30:52] 2025-11-24 02:30:08,673 | INFO     | . log creation = 2 s
[2025-11-24 03:30:52] 2025-11-24 02:30:08,673 | INFO     | ..............................
[2025-11-24 03:30:52] 2025-11-24 02:30:08,814 | INFO     | 
[2025-11-24 03:30:52] 2025-11-24 02:30:08,814 | INFO     | job summary report
[2025-11-24 03:30:52] 2025-11-24 02:30:08,814 | INFO     | --------------------------------------------------
[2025-11-24 03:30:52] 2025-11-24 02:30:08,815 | INFO     | PanDA job id: 6893838730
[2025-11-24 03:30:52] 2025-11-24 02:30:08,815 | INFO     | task id: 47523449
[2025-11-24 03:30:52] 2025-11-24 02:30:08,815 | INFO     | errors: (none)
[2025-11-24 03:30:52] 2025-11-24 02:30:08,815 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 03:30:52] 2025-11-24 02:30:08,815 | INFO     | pilot state: finished 
[2025-11-24 03:30:52] 2025-11-24 02:30:08,815 | INFO     | transexitcode: 0
[2025-11-24 03:30:52] 2025-11-24 02:30:08,815 | INFO     | exeerrorcode: 0
[2025-11-24 03:30:52] 2025-11-24 02:30:08,815 | INFO     | exeerrordiag: 
[2025-11-24 03:30:52] 2025-11-24 02:30:08,815 | INFO     | exitcode: 0
[2025-11-24 03:30:52] 2025-11-24 02:30:08,816 | INFO     | exitmsg: OK
[2025-11-24 03:30:52] 2025-11-24 02:30:08,816 | INFO     | cpuconsumptiontime: 342663 s
[2025-11-24 03:30:52] 2025-11-24 02:30:08,816 | INFO     | nevents: 1000
[2025-11-24 03:30:52] 2025-11-24 02:30:08,816 | INFO     | neventsw: 0
[2025-11-24 03:30:52] 2025-11-24 02:30:08,816 | INFO     | pid: 12557
[2025-11-24 03:30:52] 2025-11-24 02:30:08,816 | INFO     | pgrp: 12557
[2025-11-24 03:30:52] 2025-11-24 02:30:08,816 | INFO     | corecount: 8
[2025-11-24 03:30:52] 2025-11-24 02:30:08,816 | INFO     | event service: False
[2025-11-24 03:30:52] 2025-11-24 02:30:08,816 | INFO     | sizes: {0: 2298580, 1: 2298835, 2: 2298835, 10: 2299125, 12: 2299153, 92526: 2362537, 92534: 2371587, 92628: 2371777}
[2025-11-24 03:30:52] 2025-11-24 02:30:08,817 | INFO     | --------------------------------------------------
[2025-11-24 03:30:52] 2025-11-24 02:30:08,817 | INFO     | 
[2025-11-24 03:30:52] 2025-11-24 02:30:08,817 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-24 03:30:52] 2025-11-24 02:30:09,144 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 03:30:52] 2025-11-24 02:30:09,144 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 03:30:52] 2025-11-24 02:30:09,144 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 03:30:52] 2025-11-24 02:30:09,145 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 03:30:52] 2025-11-24 02:30:09,145 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 03:30:52] 2025-11-24 02:30:09,145 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 03:30:52] 2025-11-24 02:30:09,145 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 03:30:52] 2025-11-24 02:30:09,145 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 03:30:52] 2025-11-24 02:30:09,145 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 03:30:52] 2025-11-24 02:30:09,145 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 03:30:52] 2025-11-24 02:30:09,145 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 03:30:52] 2025-11-24 02:30:09,145 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 03:30:52] 2025-11-24 02:30:09,145 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 03:30:52] 2025-11-24 02:30:09,145 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 03:30:52] 2025-11-24 02:30:09,146 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 03:30:52] 2025-11-24 02:30:09,146 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 03:30:52] 2025-11-24 02:30:09,146 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 03:30:52] 2025-11-24 02:30:09,146 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 03:30:52] 2025-11-24 02:30:09,146 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 03:30:52] 2025-11-24 02:30:09,146 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 03:30:52] 2025-11-24 02:30:09,146 | INFO     | job 6893838730 has completed (purged errors)
[2025-11-24 03:30:52] 2025-11-24 02:30:09,146 | INFO     | overall cleanup function is called
[2025-11-24 03:30:52] 2025-11-24 02:30:10,171 | INFO     | --- collectZombieJob: --- 10, [12557]
[2025-11-24 03:30:52] 2025-11-24 02:30:10,172 | INFO     | zombie collector waiting for pid 12557
[2025-11-24 03:30:52] 2025-11-24 02:30:10,172 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 03:30:52] 2025-11-24 02:30:10,172 | INFO     | collected zombie processes
[2025-11-24 03:30:52] 2025-11-24 02:30:10,172 | INFO     | will attempt to kill all subprocesses of pid=12557
[2025-11-24 03:30:52] 2025-11-24 02:30:10,314 | INFO     | process IDs to be killed: [12557] (in reverse order)
[2025-11-24 03:30:52] 2025-11-24 02:30:11,241 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 03:30:52] 2025-11-24 02:30:11,242 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 03:30:52] 2025-11-24 02:30:11,246 | INFO     | did not find any defunct processes belonging to 12557
[2025-11-24 03:30:52] 2025-11-24 02:30:11,249 | INFO     | did not find any defunct processes belonging to 12557
[2025-11-24 03:30:52] 2025-11-24 02:30:11,308 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 03:30:52] 2025-11-24 02:30:11,309 | INFO     | ready for new job
[2025-11-24 03:30:52] 2025-11-24 02:30:11,309 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 03:30:52] 2025-11-24 02:30:11,316 | INFO     | ***************************************
[2025-11-24 03:30:52] 2025-11-24 02:30:11,317 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 03:30:52] 2025-11-24 02:30:11,317 | INFO     | ***************************************
[2025-11-24 03:30:52] 2025-11-24 02:30:11,317 | INFO     | 
[2025-11-24 03:30:52] 2025-11-24 02:30:11,317 | INFO     | pilot is running in a VM
[2025-11-24 03:30:52] 2025-11-24 02:30:11,318 | INFO     | architecture information:
[2025-11-24 03:30:52] 2025-11-24 02:30:11,331 | INFO     | executing command: cat /etc/os-release
[2025-11-24 03:30:52] 2025-11-24 02:30:11,538 | INFO     | cat /etc/os-release:
[2025-11-24 03:30:52] NAME="CentOS Linux"
[2025-11-24 03:30:52] VERSION="7 (Core)"
[2025-11-24 03:30:52] ID="centos"
[2025-11-24 03:30:52] ID_LIKE="rhel fedora"
[2025-11-24 03:30:52] VERSION_ID="7"
[2025-11-24 03:30:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 03:30:52] ANSI_COLOR="0;31"
[2025-11-24 03:30:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 03:30:52] HOME_URL="https://www.centos.org/"
[2025-11-24 03:30:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 03:30:52] 
[2025-11-24 03:30:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 03:30:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 03:30:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 03:30:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 03:30:52] 
[2025-11-24 03:30:52] 2025-11-24 02:30:11,538 | INFO     | ***************************************
[2025-11-24 03:30:52] 2025-11-24 02:30:12,042 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-24 03:30:52] 2025-11-24 02:30:12,367 | INFO     | sufficient remaining disk space (494964572160 B)
[2025-11-24 03:30:52] 2025-11-24 02:30:12,367 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 03:30:52] 2025-11-24 02:30:12,367 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 03:30:52] 2025-11-24 02:30:12,368 | INFO     | update_server=False
[2025-11-24 03:30:52] 2025-11-24 02:30:12,368 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 03:30:52] 2025-11-24 02:30:12,368 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 03:30:52] 2025-11-24 02:30:12,369 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 03:30:52] 2025-11-24 02:30:12,369 | INFO     | aborting loop
[2025-11-24 03:30:52] 2025-11-24 02:30:12,629 | INFO     | all data control threads have been joined
[2025-11-24 03:30:52] 2025-11-24 02:30:12,850 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 03:30:52] 2025-11-24 02:30:12,983 | INFO     | all payload control threads have been joined
[2025-11-24 03:30:52] 2025-11-24 02:30:13,374 | INFO     | [job] retrieve thread has finished
[2025-11-24 03:30:52] 2025-11-24 02:30:13,375 | INFO     | [job] job monitor thread has finished
[2025-11-24 03:30:52] 2025-11-24 02:30:13,637 | INFO     | [data] control thread has finished
[2025-11-24 03:30:52] 2025-11-24 02:30:13,711 | INFO     | [payload] failed_post thread has finished
[2025-11-24 03:30:52] 2025-11-24 02:30:13,801 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 03:30:52] 2025-11-24 02:30:13,827 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 03:30:52] 2025-11-24 02:30:13,985 | INFO     | all job control threads have been joined
[2025-11-24 03:30:52] 2025-11-24 02:30:13,989 | INFO     | [payload] control thread has finished
[2025-11-24 03:30:52] 2025-11-24 02:30:14,086 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 03:30:52] 2025-11-24 02:30:14,117 | INFO     | [data] copytool_in thread has finished
[2025-11-24 03:30:52] 2025-11-24 02:30:14,446 | INFO     | [payload] validate_post thread has finished
[2025-11-24 03:30:52] 2025-11-24 02:30:14,737 | INFO     | [job] validate thread has finished
[2025-11-24 03:30:52] 2025-11-24 02:30:14,789 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 03:30:52] 2025-11-24 02:30:14,797 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 03:30:52] 2025-11-24 02:30:14,833 | INFO     | [job] queue monitor thread has finished
[2025-11-24 03:30:52] 2025-11-24 02:30:14,857 | INFO     | [data] copytool_out thread has finished
[2025-11-24 03:30:52] 2025-11-24 02:30:14,991 | INFO     | [job] control thread has finished
[2025-11-24 03:30:52] 2025-11-24 02:30:16,384 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 03:30:52] 2025-11-24 02:30:41,017 | INFO     | PID=6051 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-24 03:30:52] 2025-11-24 02:30:41,018 | INFO     | .. there are 9 such processes running
[2025-11-24 03:30:52] 2025-11-24 02:30:41,018 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 03:30:52] 2025-11-24 02:30:41,018 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 03:30:52] 2025-11-24 02:30:41,018 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 03:30:52] 2025-11-24 02:30:42,863 | INFO     | [monitor] cgroup control has ended
[2025-11-24 03:30:52] 2025-11-24 02:30:43,883 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140392905697088)>', '<ExcThread(monitor, started 140392305501952)>']
[2025-11-24 03:30:52] 2025-11-24 02:30:44,036 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 03:30:52] 2025-11-24 02:30:44,037 | INFO     | [monitor] control thread has ended
[2025-11-24 03:30:52] 2025-11-24 02:30:48,909 | INFO     | all workflow threads have been joined
[2025-11-24 03:30:52] 2025-11-24 02:30:48,909 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 03:30:52] 2025-11-24 02:30:48,910 | INFO     | traces error code: 0
[2025-11-24 03:30:52] 2025-11-24 02:30:48,910 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 03:30:52] 2025-11-24 02:30:49,324 [wrapper] ==== pilot stdout END ====
[2025-11-24 03:30:52] 2025-11-24 02:30:49,405 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 03:30:52] 2025-11-24 02:30:49,462 [wrapper] pilotpid: 6051
[2025-11-24 03:30:52] 2025-11-24 02:30:49,557 [wrapper] Pilot exit status: 0
[2025-11-24 03:30:52] 2025-11-24 02:30:49,977 [wrapper] pandaids: 6893838730
[2025-11-24 03:30:52] 2025-11-24 02:30:50,365 [wrapper] cleanup supervisor_pilot 24655 6052
[2025-11-24 03:30:52] 2025-11-24 02:30:50,406 [wrapper] Test setup, not cleaning
[2025-11-24 03:30:52] 2025-11-24 02:30:50,421 [wrapper] apfmon messages muted
[2025-11-24 03:30:52] 2025-11-24 02:30:50,489 [wrapper] ==== wrapper stdout END ====
[2025-11-24 03:30:52] 2025-11-24 02:30:50,590 [wrapper] ==== wrapper stderr END ====
[2025-11-24 03:30:52]  *** Error codes and diagnostics ***
[2025-11-24 03:30:52]     "exeErrorCode": 0,
[2025-11-24 03:30:52]     "exeErrorDiag": "",
[2025-11-24 03:30:52]     "pilotErrorCode": 0,
[2025-11-24 03:30:52]     "pilotErrorDiag": "",
[2025-11-24 03:30:52]  *** Listing of results directory ***
[2025-11-24 03:30:52] total 1337628
[2025-11-24 03:30:52] -rw-r--r--. 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-24 03:30:52] -rwx------. 1 boinc boinc     36292 Nov 20 11:14 runpilot2-wrapper.sh
[2025-11-24 03:30:52] -rw-r--r--. 1 boinc boinc      5112 Nov 20 11:15 queuedata.json
[2025-11-24 03:30:52] -rw-r--r--. 1 boinc boinc       100 Nov 23 01:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 03:30:52] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 01:45 run_atlas
[2025-11-24 03:30:52] -rw-r--r--. 1 boinc boinc       105 Nov 23 01:45 job.xml
[2025-11-24 03:30:52] -rw-r--r--. 1 boinc boinc      6390 Nov 23 01:45 init_data.xml
[2025-11-24 03:30:52] -rw-r--r--. 2 boinc boinc 410563546 Nov 23 01:45 EVNT.47493127._000138.pool.root.1
[2025-11-24 03:30:52] -rw-r--r--. 2 boinc boinc     15847 Nov 23 01:45 start_atlas.sh
[2025-11-24 03:30:52] drwxrwx--x. 2 boinc boinc        68 Nov 23 01:45 shared
[2025-11-24 03:30:52] -rw-r--r--. 2 boinc boinc    590103 Nov 23 01:45 input.tar.gz
[2025-11-24 03:30:52] -rw-r--r--. 1 boinc boinc         0 Nov 23 01:45 boinc_lockfile
[2025-11-24 03:30:52] -rw-r--r--. 1 boinc boinc      2786 Nov 23 01:45 pandaJob.out
[2025-11-24 03:30:52] -rw-------. 1 boinc boinc    989784 Nov 23 01:45 agis_schedconf.cvmfs.json
[2025-11-24 03:30:52] drwx------. 5 boinc boinc      4096 Nov 23 01:46 pilot3
[2025-11-24 03:30:52] -rw-r--r--. 1 boinc boinc       533 Nov 24 02:59 boinc_task_state.xml
[2025-11-24 03:30:52] -rw-------. 1 boinc boinc 925460448 Nov 24 03:27 HITS.47523449._001373.pool.root.1
[2025-11-24 03:30:52] -rw-------. 1 boinc boinc      1031 Nov 24 03:28 memory_monitor_summary.json
[2025-11-24 03:30:52] -rw-------. 1 boinc boinc   1526164 Nov 24 03:28 agis_ddmendpoints.agis.ALL.json
[2025-11-24 03:30:52] -rw-------. 1 boinc boinc   2573497 Nov 24 03:28 log.47523449._001373.job.log.tgz.1
[2025-11-24 03:30:52] -rw-------. 1 boinc boinc      7962 Nov 24 03:30 heartbeat.json
[2025-11-24 03:30:52] -rw-------. 1 boinc boinc        95 Nov 24 03:30 pilot_heartbeat.json
[2025-11-24 03:30:52] -rw-r--r--. 1 boinc boinc        29 Nov 24 03:30 wrapper_checkpoint.txt
[2025-11-24 03:30:52] -rw-r--r--. 1 boinc boinc      8192 Nov 24 03:30 boinc_mmap_file
[2025-11-24 03:30:52] -rw-------. 1 boinc boinc      4883 Nov 24 03:30 pilotlog.txt
[2025-11-24 03:30:52] -rw-------. 1 boinc boinc  12322400 Nov 24 03:30 log.47523449._001373.job.log.1
[2025-11-24 03:30:52] -rw-------. 1 boinc boinc       353 Nov 24 03:30 output.list
[2025-11-24 03:30:52] -rw-r--r--. 1 boinc boinc       620 Nov 24 03:30 runtime_log
[2025-11-24 03:30:52] -rw-------. 1 boinc boinc  14919680 Nov 24 03:30 result.tar.gz
[2025-11-24 03:30:52] -rw-r--r--. 1 boinc boinc      8817 Nov 24 03:30 runtime_log.err
[2025-11-24 03:30:52] -rw-------. 1 boinc boinc       662 Nov 24 03:30 0QZMDmsrGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmIJGKDmB3zE6m.diag
[2025-11-24 03:30:52] -rw-r--r--. 1 boinc boinc     21479 Nov 24 03:30 stderr.txt
[2025-11-24 03:30:52] HITS file was successfully produced:
[2025-11-24 03:30:52] -rw-------. 1 boinc boinc 925460448 Nov 24 03:27 shared/HITS.pool.root.1
[2025-11-24 03:30:52]  *** Contents of shared directory: ***
[2025-11-24 03:30:52] total 1319884
[2025-11-24 03:30:52] -rw-r--r--. 2 boinc boinc 410563546 Nov 23 01:45 ATLAS.root_0
[2025-11-24 03:30:52] -rw-r--r--. 2 boinc boinc     15847 Nov 23 01:45 start_atlas.sh
[2025-11-24 03:30:52] -rw-r--r--. 2 boinc boinc    590103 Nov 23 01:45 input.tar.gz
[2025-11-24 03:30:52] -rw-------. 1 boinc boinc 925460448 Nov 24 03:27 HITS.pool.root.1
[2025-11-24 03:30:52] -rw-------. 1 boinc boinc  14919680 Nov 24 03:30 result.tar.gz
03:30:54 (2282): run_atlas exited; CPU time 343107.548235
03:30:54 (2282): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN