Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:18:13 (248568): wrapper (7.7.26015): starting
08:18:13 (248568): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 08:18:13] Arguments: --nthreads 8
[2025-11-20 08:18:13] Threads: 8
[2025-11-20 08:18:13] Checking for CVMFS
[2025-11-20 08:18:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 08:18:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 08:18:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 08:18:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 08:18:13] 2.13.2.0 5784 24286 182936 153082 1 345 29560213 39288832 6940 16776704 0 11730634 99.649 9362268 34808 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 08:18:13] CVMFS is ok
[2025-11-20 08:18:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 08:18:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 08:18:13] Further information can be found at the LHC@home message board.
[2025-11-20 08:18:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 08:18:13] Checking for apptainer binary...
[2025-11-20 08:18:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 08:18:13] Running /usr/bin/apptainer --version
[2025-11-20 08:18:13] apptainer version 1.4.4-1.el9
[2025-11-20 08:18:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 08:18:14] c-210-12.aglt2.org
[2025-11-20 08:18:14] apptainer works
[2025-11-20 08:18:14] Set ATHENA_PROC_NUMBER=8
[2025-11-20 08:18:14] Set ATHENA_CORE_NUMBER=8
[2025-11-20 08:18:14] Starting ATLAS job with PandaID=6893850368
[2025-11-20 08:18:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 05:31:49]  *** The last 200 lines of the pilot log: ***
[2025-11-21 05:31:49] 2025-11-21 10:30:58,400 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 05:31:49] 2025-11-21 10:30:58,452 | INFO     | time since job start (76352s) is within the limit (172800.0s)
[2025-11-21 05:31:49] 2025-11-21 10:31:00,151 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 05:31:49] 2025-11-21 10:31:00,157 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.2189000000008
[2025-11-21 05:31:49] 2025-11-21 10:31:00,164 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6893850368/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 05:31:49] 2025-11-21 10:31:00,164 | INFO     | extracted standard info from prmon json
[2025-11-21 05:31:49] 2025-11-21 10:31:00,165 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 05:31:49] 2025-11-21 10:31:00,165 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 05:31:49] 2025-11-21 10:31:00,187 | INFO     | fitting pss+swap vs Time
[2025-11-21 05:31:49] 2025-11-21 10:31:00,189 | INFO     | sum of square deviations: 608468504821.8977
[2025-11-21 05:31:49] 2025-11-21 10:31:00,225 | INFO     | sum of deviations: 4103215147938.7837
[2025-11-21 05:31:49] 2025-11-21 10:31:00,226 | INFO     | mean x: 1763682894.2332268
[2025-11-21 05:31:49] 2025-11-21 10:31:00,226 | INFO     | mean y: 2862206.14456869
[2025-11-21 05:31:49] 2025-11-21 10:31:00,226 | INFO     | intersect: -11890555958.360983
[2025-11-21 05:31:49] 2025-11-21 10:31:00,228 | INFO     | chi2: 6.62789396975948
[2025-11-21 05:31:49] 2025-11-21 10:31:00,229 | INFO     | sum of square deviations: 601207775129.3959
[2025-11-21 05:31:49] 2025-11-21 10:31:00,269 | INFO     | sum of deviations: 4543016720068.436
[2025-11-21 05:31:49] 2025-11-21 10:31:00,269 | INFO     | mean x: 1763682741.7441862
[2025-11-21 05:31:49] 2025-11-21 10:31:00,269 | INFO     | mean y: 2871442.302325581
[2025-11-21 05:31:49] 2025-11-21 10:31:00,269 | INFO     | intersect: -13324368350.821587
[2025-11-21 05:31:49] 2025-11-21 10:31:00,271 | INFO     | chi2: 3.155487850764632
[2025-11-21 05:31:49] 2025-11-21 10:31:00,271 | INFO     | current chi2=3.155487850764632 (change=52.39079162759839 %)
[2025-11-21 05:31:49] 2025-11-21 10:31:00,273 | INFO     | sum of square deviations: 594004970705.6003
[2025-11-21 05:31:49] 2025-11-21 10:31:00,308 | INFO     | sum of deviations: 4636672626785.818
[2025-11-21 05:31:49] 2025-11-21 10:31:00,309 | INFO     | mean x: 1763682589.2544284
[2025-11-21 05:31:49] 2025-11-21 10:31:00,309 | INFO     | mean y: 2873420.3961352655
[2025-11-21 05:31:49] 2025-11-21 10:31:00,309 | INFO     | intersect: -13764046365.175358
[2025-11-21 05:31:49] 2025-11-21 10:31:00,311 | INFO     | chi2: 2.7168226272129155
[2025-11-21 05:31:49] 2025-11-21 10:31:00,311 | INFO     | current chi2=2.7168226272129155 (change=13.901660988662023 %)
[2025-11-21 05:31:49] 2025-11-21 10:31:00,311 | INFO     | right removable region: 1241
[2025-11-21 05:31:49] 2025-11-21 10:31:00,313 | INFO     | sum of square deviations: 601205839972.3684
[2025-11-21 05:31:49] 2025-11-21 10:31:00,349 | INFO     | sum of deviations: 3745733235689.317
[2025-11-21 05:31:49] 2025-11-21 10:31:00,349 | INFO     | mean x: 1763683046.742582
[2025-11-21 05:31:49] 2025-11-21 10:31:00,349 | INFO     | mean y: 2869705.5741780275
[2025-11-21 05:31:49] 2025-11-21 10:31:00,349 | INFO     | intersect: -10985523563.707954
[2025-11-21 05:31:49] 2025-11-21 10:31:00,351 | INFO     | chi2: 4.212605534089279
[2025-11-21 05:31:49] 2025-11-21 10:31:00,351 | INFO     | current chi2=4.212605534089279 (change=36.44126545611968 %)
[2025-11-21 05:31:49] 2025-11-21 10:31:00,353 | INFO     | sum of square deviations: 594002164859.536
[2025-11-21 05:31:49] 2025-11-21 10:31:00,390 | INFO     | sum of deviations: 3653108216629.218
[2025-11-21 05:31:49] 2025-11-21 10:31:00,390 | INFO     | mean x: 1763683199.241546
[2025-11-21 05:31:49] 2025-11-21 10:31:00,390 | INFO     | mean y: 2871666.282608696
[2025-11-21 05:31:49] 2025-11-21 10:31:00,391 | INFO     | intersect: -10843764874.518147
[2025-11-21 05:31:49] 2025-11-21 10:31:00,392 | INFO     | chi2: 4.172053541702441
[2025-11-21 05:31:49] 2025-11-21 10:31:00,392 | INFO     | current chi2=4.172053541702441 (change=0.9626344564826476 %)
[2025-11-21 05:31:49] 2025-11-21 10:31:00,392 | INFO     | left removable region: 20
[2025-11-21 05:31:49] 2025-11-21 10:31:00,394 | INFO     | sum of square deviations: 564376906348.1682
[2025-11-21 05:31:49] 2025-11-21 10:31:00,428 | INFO     | sum of deviations: 4022542762479.997
[2025-11-21 05:31:49] 2025-11-21 10:31:00,429 | INFO     | mean x: 1763683168.7608519
[2025-11-21 05:31:49] 2025-11-21 10:31:00,429 | INFO     | mean y: 2886179.773955774
[2025-11-21 05:31:49] 2025-11-21 10:31:00,429 | INFO     | intersect: -12567597987.822563
[2025-11-21 05:31:49] 2025-11-21 10:31:00,431 | INFO     | chi2: 0.2038377169773794
[2025-11-21 05:31:49] 2025-11-21 10:31:00,431 | INFO     | current memory leak: 7.13 B/s (using 1221 data points, chi2=0.20)
[2025-11-21 05:31:49] 2025-11-21 10:31:00,432 | INFO     | could have reported an average CPU frequency of 2600 MHz (45 samples)
[2025-11-21 05:31:49] 2025-11-21 10:31:00,432 | INFO     | ..............................
[2025-11-21 05:31:49] 2025-11-21 10:31:00,432 | INFO     | . Timing measurements:
[2025-11-21 05:31:49] 2025-11-21 10:31:00,432 | INFO     | . get job = 0 s
[2025-11-21 05:31:49] 2025-11-21 10:31:00,433 | INFO     | . initial setup = 2 s
[2025-11-21 05:31:49] 2025-11-21 10:31:00,433 | INFO     | . payload setup = 7 s
[2025-11-21 05:31:49] 2025-11-21 10:31:00,433 | INFO     | . stage-in = 0 s
[2025-11-21 05:31:49] 2025-11-21 10:31:00,433 | INFO     | . payload execution = 76317 s
[2025-11-21 05:31:49] 2025-11-21 10:31:00,433 | INFO     | . stage-out = 3 s
[2025-11-21 05:31:49] 2025-11-21 10:31:00,433 | INFO     | . log creation = 0 s
[2025-11-21 05:31:49] 2025-11-21 10:31:00,433 | INFO     | ..............................
[2025-11-21 05:31:49] 2025-11-21 10:31:00,465 | INFO     | time since job start (76354s) is within the limit (172800.0s)
[2025-11-21 05:31:49] 2025-11-21 10:31:00,934 | INFO     | 
[2025-11-21 05:31:49] 2025-11-21 10:31:00,934 | INFO     | job summary report
[2025-11-21 05:31:49] 2025-11-21 10:31:00,935 | INFO     | --------------------------------------------------
[2025-11-21 05:31:49] 2025-11-21 10:31:00,935 | INFO     | PanDA job id: 6893850368
[2025-11-21 05:31:49] 2025-11-21 10:31:00,935 | INFO     | task id: 47523449
[2025-11-21 05:31:49] 2025-11-21 10:31:00,935 | INFO     | errors: (none)
[2025-11-21 05:31:49] 2025-11-21 10:31:00,935 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 05:31:49] 2025-11-21 10:31:00,935 | INFO     | pilot state: finished 
[2025-11-21 05:31:49] 2025-11-21 10:31:00,935 | INFO     | transexitcode: 0
[2025-11-21 05:31:49] 2025-11-21 10:31:00,935 | INFO     | exeerrorcode: 0
[2025-11-21 05:31:49] 2025-11-21 10:31:00,936 | INFO     | exeerrordiag: 
[2025-11-21 05:31:49] 2025-11-21 10:31:00,936 | INFO     | exitcode: 0
[2025-11-21 05:31:49] 2025-11-21 10:31:00,936 | INFO     | exitmsg: OK
[2025-11-21 05:31:49] 2025-11-21 10:31:00,936 | INFO     | cpuconsumptiontime: 295901 s
[2025-11-21 05:31:49] 2025-11-21 10:31:00,936 | INFO     | nevents: 1000
[2025-11-21 05:31:49] 2025-11-21 10:31:00,936 | INFO     | neventsw: 0
[2025-11-21 05:31:49] 2025-11-21 10:31:00,936 | INFO     | pid: 272277
[2025-11-21 05:31:49] 2025-11-21 10:31:00,936 | INFO     | pgrp: 272277
[2025-11-21 05:31:49] 2025-11-21 10:31:00,936 | INFO     | corecount: 8
[2025-11-21 05:31:49] 2025-11-21 10:31:00,937 | INFO     | event service: False
[2025-11-21 05:31:49] 2025-11-21 10:31:00,937 | INFO     | sizes: {0: 2298806, 4: 2299068, 11: 2299096, 76327: 2359121, 76331: 2368171, 76337: 2368361}
[2025-11-21 05:31:49] 2025-11-21 10:31:00,937 | INFO     | --------------------------------------------------
[2025-11-21 05:31:49] 2025-11-21 10:31:00,937 | INFO     | 
[2025-11-21 05:31:49] 2025-11-21 10:31:00,937 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-21 05:31:49] 2025-11-21 10:31:00,957 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 05:31:49] 2025-11-21 10:31:00,958 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 05:31:49] 2025-11-21 10:31:00,958 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 05:31:49] 2025-11-21 10:31:00,958 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 05:31:49] 2025-11-21 10:31:00,958 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 05:31:49] 2025-11-21 10:31:00,958 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 05:31:49] 2025-11-21 10:31:00,958 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 05:31:49] 2025-11-21 10:31:00,958 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 05:31:49] 2025-11-21 10:31:00,958 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 05:31:49] 2025-11-21 10:31:00,959 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 05:31:49] 2025-11-21 10:31:00,959 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 05:31:49] 2025-11-21 10:31:00,959 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 05:31:49] 2025-11-21 10:31:00,959 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 05:31:49] 2025-11-21 10:31:00,959 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 05:31:49] 2025-11-21 10:31:00,959 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 05:31:49] 2025-11-21 10:31:00,959 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 05:31:49] 2025-11-21 10:31:00,959 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 05:31:49] 2025-11-21 10:31:00,959 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 05:31:49] 2025-11-21 10:31:00,960 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 05:31:49] 2025-11-21 10:31:00,960 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 05:31:49] 2025-11-21 10:31:00,960 | INFO     | job 6893850368 has completed (purged errors)
[2025-11-21 05:31:49] 2025-11-21 10:31:00,960 | INFO     | overall cleanup function is called
[2025-11-21 05:31:49] 2025-11-21 10:31:01,975 | INFO     | --- collectZombieJob: --- 10, [272277]
[2025-11-21 05:31:49] 2025-11-21 10:31:01,975 | INFO     | zombie collector waiting for pid 272277
[2025-11-21 05:31:49] 2025-11-21 10:31:01,975 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 05:31:49] 2025-11-21 10:31:01,975 | INFO     | collected zombie processes
[2025-11-21 05:31:49] 2025-11-21 10:31:01,975 | INFO     | will attempt to kill all subprocesses of pid=272277
[2025-11-21 05:31:49] 2025-11-21 10:31:02,225 | INFO     | process IDs to be killed: [272277] (in reverse order)
[2025-11-21 05:31:49] 2025-11-21 10:31:02,304 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 05:31:49] 2025-11-21 10:31:02,304 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 05:31:49] 2025-11-21 10:31:02,312 | INFO     | did not find any defunct processes belonging to 272277
[2025-11-21 05:31:49] 2025-11-21 10:31:02,319 | INFO     | did not find any defunct processes belonging to 272277
[2025-11-21 05:31:49] 2025-11-21 10:31:02,321 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 05:31:49] 2025-11-21 10:31:02,321 | INFO     | ready for new job
[2025-11-21 05:31:49] 2025-11-21 10:31:02,321 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 05:31:49] 2025-11-21 10:31:02,327 | INFO     | ***************************************
[2025-11-21 05:31:49] 2025-11-21 10:31:02,327 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 05:31:49] 2025-11-21 10:31:02,327 | INFO     | ***************************************
[2025-11-21 05:31:49] 2025-11-21 10:31:02,327 | INFO     | 
[2025-11-21 05:31:49] 2025-11-21 10:31:02,329 | INFO     | architecture information:
[2025-11-21 05:31:49] 2025-11-21 10:31:02,329 | INFO     | executing command: cat /etc/os-release
[2025-11-21 05:31:49] 2025-11-21 10:31:02,346 | INFO     | cat /etc/os-release:
[2025-11-21 05:31:49] NAME="CentOS Linux"
[2025-11-21 05:31:49] VERSION="7 (Core)"
[2025-11-21 05:31:49] ID="centos"
[2025-11-21 05:31:49] ID_LIKE="rhel fedora"
[2025-11-21 05:31:49] VERSION_ID="7"
[2025-11-21 05:31:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 05:31:49] ANSI_COLOR="0;31"
[2025-11-21 05:31:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 05:31:49] HOME_URL="https://www.centos.org/"
[2025-11-21 05:31:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 05:31:49] 
[2025-11-21 05:31:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 05:31:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 05:31:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 05:31:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 05:31:49] 
[2025-11-21 05:31:49] 2025-11-21 10:31:02,346 | INFO     | ***************************************
[2025-11-21 05:31:49] 2025-11-21 10:31:02,849 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-21 05:31:49] 2025-11-21 10:31:02,864 | INFO     | sufficient remaining disk space (47714402304 B)
[2025-11-21 05:31:49] 2025-11-21 10:31:02,865 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 05:31:49] 2025-11-21 10:31:02,865 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 05:31:49] 2025-11-21 10:31:02,865 | INFO     | update_server=False
[2025-11-21 05:31:49] 2025-11-21 10:31:02,865 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 05:31:49] 2025-11-21 10:31:02,865 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 05:31:49] 2025-11-21 10:31:02,866 | INFO     | aborting loop
[2025-11-21 05:31:49] 2025-11-21 10:31:02,866 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 05:31:49] 2025-11-21 10:31:02,941 | INFO     | all payload control threads have been joined
[2025-11-21 05:31:49] 2025-11-21 10:31:03,595 | INFO     | all job control threads have been joined
[2025-11-21 05:31:49] 2025-11-21 10:31:03,618 | INFO     | all data control threads have been joined
[2025-11-21 05:31:49] 2025-11-21 10:31:03,871 | INFO     | [job] retrieve thread has finished
[2025-11-21 05:31:49] 2025-11-21 10:31:03,872 | INFO     | [job] job monitor thread has finished
[2025-11-21 05:31:49] 2025-11-21 10:31:03,890 | INFO     | [job] validate thread has finished
[2025-11-21 05:31:49] 2025-11-21 10:31:03,947 | INFO     | [payload] control thread has finished
[2025-11-21 05:31:49] 2025-11-21 10:31:04,270 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 05:31:49] 2025-11-21 10:31:04,347 | INFO     | [data] copytool_in thread has finished
[2025-11-21 05:31:49] 2025-11-21 10:31:04,456 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 05:31:49] 2025-11-21 10:31:04,601 | INFO     | [job] control thread has finished
[2025-11-21 05:31:49] 2025-11-21 10:31:04,621 | INFO     | [payload] validate_post thread has finished
[2025-11-21 05:31:49] 2025-11-21 10:31:04,624 | INFO     | [data] control thread has finished
[2025-11-21 05:31:49] 2025-11-21 10:31:04,668 | INFO     | [payload] failed_post thread has finished
[2025-11-21 05:31:49] 2025-11-21 10:31:04,873 | INFO     | [data] copytool_out thread has finished
[2025-11-21 05:31:49] 2025-11-21 10:31:05,031 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 05:31:49] 2025-11-21 10:31:05,133 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 05:31:49] 2025-11-21 10:31:05,216 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 05:31:49] 2025-11-21 10:31:05,546 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 05:31:49] 2025-11-21 10:31:06,552 | INFO     | [job] queue monitor thread has finished
[2025-11-21 05:31:49] 2025-11-21 10:31:09,142 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 05:31:49] 2025-11-21 10:31:34,153 | INFO     | PID=253974 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-21 05:31:49] 2025-11-21 10:31:34,153 | INFO     | .. there are 7 such processes running
[2025-11-21 05:31:49] 2025-11-21 10:31:34,153 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 05:31:49] 2025-11-21 10:31:34,154 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 05:31:49] 2025-11-21 10:31:34,154 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 05:31:49] 2025-11-21 10:31:42,659 | INFO     | [monitor] cgroup control has ended
[2025-11-21 05:31:49] 2025-11-21 10:31:43,245 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140656162588480)>', '<ExcThread(monitor, started 140655506466560)>']
[2025-11-21 05:31:49] 2025-11-21 10:31:44,216 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 05:31:49] 2025-11-21 10:31:44,216 | INFO     | [monitor] control thread has ended
[2025-11-21 05:31:49] 2025-11-21 10:31:48,271 | INFO     | all workflow threads have been joined
[2025-11-21 05:31:49] 2025-11-21 10:31:48,271 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 05:31:49] 2025-11-21 10:31:48,271 | INFO     | traces error code: 0
[2025-11-21 05:31:49] 2025-11-21 10:31:48,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 05:31:49] 2025-11-21 10:31:48,494 [wrapper] ==== pilot stdout END ====
[2025-11-21 05:31:49] 2025-11-21 10:31:48,496 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 05:31:49] 2025-11-21 10:31:48,499 [wrapper] pilotpid: 253974
[2025-11-21 05:31:49] 2025-11-21 10:31:48,501 [wrapper] Pilot exit status: 0
[2025-11-21 05:31:49] 2025-11-21 10:31:48,611 [wrapper] pandaids: 6893850368
[2025-11-21 05:31:49] 2025-11-21 10:31:48,700 [wrapper] cleanup supervisor_pilot 1950314 253975
[2025-11-21 05:31:49] 2025-11-21 10:31:48,723 [wrapper] Test setup, not cleaning
[2025-11-21 05:31:49] 2025-11-21 10:31:48,742 [wrapper] apfmon messages muted
[2025-11-21 05:31:49] 2025-11-21 10:31:48,765 [wrapper] ==== wrapper stdout END ====
[2025-11-21 05:31:49] 2025-11-21 10:31:48,784 [wrapper] ==== wrapper stderr END ====
[2025-11-21 05:31:49]  *** Error codes and diagnostics ***
[2025-11-21 05:31:49]     "exeErrorCode": 0,
[2025-11-21 05:31:49]     "exeErrorDiag": "",
[2025-11-21 05:31:49]     "pilotErrorCode": 0,
[2025-11-21 05:31:49]     "pilotErrorDiag": "",
[2025-11-21 05:31:49]  *** Listing of results directory ***
[2025-11-21 05:31:49] total 1317564
[2025-11-21 05:31:49] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 06:09 pilot3.tar.gz
[2025-11-21 05:31:49] -rwx------. 1 boincer umatlas     36292 Nov 20 06:20 runpilot2-wrapper.sh
[2025-11-21 05:31:49] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 06:20 queuedata.json
[2025-11-21 05:31:49] -rw-r--r--. 1 boincer umatlas       100 Nov 20 08:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 05:31:49] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 20 08:18 run_atlas
[2025-11-21 05:31:49] -rw-r--r--. 1 boincer umatlas       105 Nov 20 08:18 job.xml
[2025-11-21 05:31:49] -rw-r--r--. 2 boincer umatlas 409179113 Nov 20 08:18 EVNT.47493127._000332.pool.root.1
[2025-11-21 05:31:49] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 08:18 start_atlas.sh
[2025-11-21 05:31:49] drwxrwx--x. 2 boincer umatlas      4096 Nov 20 08:18 shared
[2025-11-21 05:31:49] -rw-r--r--. 2 boincer umatlas    590099 Nov 20 08:18 input.tar.gz
[2025-11-21 05:31:49] -rw-r--r--. 1 boincer umatlas         0 Nov 20 08:18 boinc_lockfile
[2025-11-21 05:31:49] -rw-r--r--. 1 boincer umatlas      2785 Nov 20 08:18 pandaJob.out
[2025-11-21 05:31:49] -rw-------. 1 boincer umatlas        57 Nov 20 08:18 setup.sh.local
[2025-11-21 05:31:49] -rw-------. 1 boincer umatlas    989448 Nov 20 08:18 agis_schedconf.cvmfs.json
[2025-11-21 05:31:49] drwx------. 5 boincer umatlas      4096 Nov 20 08:18 pilot3
[2025-11-21 05:31:49] -rw-r--r--. 1 boincer umatlas      6662 Nov 21 05:18 init_data.xml
[2025-11-21 05:31:49] -rw-r--r--. 1 boincer umatlas       533 Nov 21 05:21 boinc_task_state.xml
[2025-11-21 05:31:49] -rw-------. 1 boincer umatlas 911504398 Nov 21 05:30 HITS.47523449._003320.pool.root.1
[2025-11-21 05:31:49] -rw-------. 1 boincer umatlas      1064 Nov 21 05:30 memory_monitor_summary.json
[2025-11-21 05:31:49] -rw-------. 1 boincer umatlas   1526164 Nov 21 05:30 agis_ddmendpoints.agis.ALL.json
[2025-11-21 05:31:49] -rw-------. 1 boincer umatlas   2343140 Nov 21 05:30 log.47523449._003320.job.log.tgz.1
[2025-11-21 05:31:49] -rw-------. 1 boincer umatlas      8653 Nov 21 05:31 heartbeat.json
[2025-11-21 05:31:49] -rw-------. 1 boincer umatlas        95 Nov 21 05:31 pilot_heartbeat.json
[2025-11-21 05:31:49] -rw-------. 1 boincer umatlas      4822 Nov 21 05:31 pilotlog.txt
[2025-11-21 05:31:49] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 05:31 boinc_mmap_file
[2025-11-21 05:31:49] -rw-------. 1 boincer umatlas   9942025 Nov 21 05:31 log.47523449._003320.job.log.1
[2025-11-21 05:31:49] -rw-r--r--. 1 boincer umatlas        29 Nov 21 05:31 wrapper_checkpoint.txt
[2025-11-21 05:31:49] -rw-------. 1 boincer umatlas       353 Nov 21 05:31 output.list
[2025-11-21 05:31:49] -rw-r--r--. 1 boincer umatlas       620 Nov 21 05:31 runtime_log
[2025-11-21 05:31:49] -rw-------. 1 boincer umatlas  12308480 Nov 21 05:31 result.tar.gz
[2025-11-21 05:31:49] -rw-r--r--. 1 boincer umatlas      9343 Nov 21 05:31 runtime_log.err
[2025-11-21 05:31:49] -rw-------. 1 boincer umatlas       664 Nov 21 05:31 m9nNDmqtHg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlcHKDmlxQI7n.diag
[2025-11-21 05:31:49] -rw-r--r--. 1 boincer umatlas     21294 Nov 21 05:31 stderr.txt
[2025-11-21 05:31:49] HITS file was successfully produced:
[2025-11-21 05:31:49] -rw-------. 1 boincer umatlas 911504398 Nov 21 05:30 shared/HITS.pool.root.1
[2025-11-21 05:31:49]  *** Contents of shared directory: ***
[2025-11-21 05:31:49] total 1302356
[2025-11-21 05:31:49] -rw-r--r--. 2 boincer umatlas 409179113 Nov 20 08:18 ATLAS.root_0
[2025-11-21 05:31:49] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 08:18 start_atlas.sh
[2025-11-21 05:31:49] -rw-r--r--. 2 boincer umatlas    590099 Nov 20 08:18 input.tar.gz
[2025-11-21 05:31:49] -rw-------. 1 boincer umatlas 911504398 Nov 21 05:30 HITS.pool.root.1
[2025-11-21 05:31:49] -rw-------. 1 boincer umatlas  12308480 Nov 21 05:31 result.tar.gz
05:31:50 (248568): run_atlas exited; CPU time 296632.228902
05:31:50 (248568): called boinc_finish(0)

</stderr_txt>
]]>

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