Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:35:12 (4013569): wrapper (7.7.26015): starting
08:35:12 (4013569): wrapper: running run_atlas (--nthreads 2)
[2025-11-23 08:35:12] Arguments: --nthreads 2
[2025-11-23 08:35:12] Threads: 2
[2025-11-23 08:35:12] Checking for CVMFS
[2025-11-23 08:35:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 08:35:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 08:35:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 08:35:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 08:35:12] 2.9.2.0 3650396 2316 52848 153201 3 81 32547560 36864000 0 130560 0 733662 99.977 80415 19724 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-23 08:35:12] CVMFS is ok
[2025-11-23 08:35:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 08:35:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 08:35:12] Further information can be found at the LHC@home message board.
[2025-11-23 08:35:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 08:35:12] Checking for apptainer binary...
[2025-11-23 08:35:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 08:35:12] Running /usr/bin/apptainer --version
[2025-11-23 08:35:12] apptainer version 1.4.1-1.1
[2025-11-23 08:35:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 08:35:12] thA369
[2025-11-23 08:35:12] apptainer works
[2025-11-23 08:35:12] Set ATHENA_PROC_NUMBER=2
[2025-11-23 08:35:12] Set ATHENA_CORE_NUMBER=2
[2025-11-23 08:35:12] Starting ATLAS job with PandaID=6893849723
[2025-11-23 08:35:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 21:21:33]  *** The last 200 lines of the pilot log: ***
[2025-11-23 21:21:33] 2025-11-23 20:20:28,421 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 21:21:33] 2025-11-23 20:20:28,421 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 21:21:33] 2025-11-23 20:20:28,421 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 21:21:33] 2025-11-23 20:20:28,421 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 21:21:33] 2025-11-23 20:20:28,613 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 21:21:33] 2025-11-23 20:20:28,613 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 21:21:33] 2025-11-23 20:20:28,613 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 21:21:33] 2025-11-23 20:20:28,613 | INFO     | will abort loop
[2025-11-23 21:21:33] 2025-11-23 20:20:29,122 | INFO     | all data control threads have been joined
[2025-11-23 21:21:33] 2025-11-23 20:20:29,357 | INFO     | all job control threads have been joined
[2025-11-23 21:21:33] 2025-11-23 20:20:29,425 | INFO     | [job] queue monitor thread has finished
[2025-11-23 21:21:33] 2025-11-23 20:20:29,425 | INFO     | [job] retrieve thread has finished
[2025-11-23 21:21:33] 2025-11-23 20:20:29,427 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 21:21:33] 2025-11-23 20:20:29,552 | INFO     | [payload] validate_post thread has finished
[2025-11-23 21:21:33] 2025-11-23 20:20:29,553 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 21:21:33] 2025-11-23 20:20:29,618 | INFO     | [job] job monitor thread has finished
[2025-11-23 21:21:33] 2025-11-23 20:20:29,727 | INFO     | all payload control threads have been joined
[2025-11-23 21:21:33] 2025-11-23 20:20:29,910 | INFO     | [payload] failed_post thread has finished
[2025-11-23 21:21:33] 2025-11-23 20:20:30,121 | INFO     | [data] copytool_in thread has finished
[2025-11-23 21:21:33] 2025-11-23 20:20:30,127 | INFO     | [data] control thread has finished
[2025-11-23 21:21:33] 2025-11-23 20:20:30,362 | INFO     | [job] control thread has finished
[2025-11-23 21:21:33] 2025-11-23 20:20:30,424 | INFO     | [job] validate thread has finished
[2025-11-23 21:21:33] 2025-11-23 20:20:30,426 | INFO     | [data] copytool_out thread has finished
[2025-11-23 21:21:33] 2025-11-23 20:20:30,429 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 21:21:33] 2025-11-23 20:20:30,459 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 21:21:33] 2025-11-23 20:20:30,732 | INFO     | [payload] control thread has finished
[2025-11-23 21:21:33] 2025-11-23 20:20:30,903 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 21:21:33] 2025-11-23 20:20:33,432 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 21:21:33] 2025-11-23 20:21:26,959 | INFO     | [monitor] cgroup control has ended
[2025-11-23 21:21:33] 2025-11-23 20:21:28,665 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140666028709696)>', '<ExcThread(monitor, started 140665530865408)>']
[2025-11-23 21:21:33] 2025-11-23 20:21:28,715 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 21:21:33] 2025-11-23 20:21:28,715 | INFO     | [monitor] control thread has ended
[2025-11-23 21:21:33] 2025-11-23 20:21:33,690 | INFO     | all workflow threads have been joined
[2025-11-23 21:21:33] 2025-11-23 20:21:33,690 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 21:21:33] 2025-11-23 20:21:33,690 | INFO     | traces error code: 0
[2025-11-23 21:21:33] 2025-11-23 20:21:33,690 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 21:21:33] 2025-11-23 20:21:33,734 [wrapper] ==== pilot stdout END ====
[2025-11-23 21:21:33] 2025-11-23 20:21:33,737 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 21:21:33] 2025-11-23 20:21:33,739 [wrapper] pilotpid: 4017277
[2025-11-23 21:21:33] 2025-11-23 20:21:33,742 [wrapper] Pilot exit status: 0
[2025-11-23 21:21:33] 2025-11-23 20:21:33,748 [wrapper] pandaids: 6893849723
[2025-11-23 21:21:33] 2025-11-23 20:21:33,765 [wrapper] cleanup supervisor_pilot 4133323 4017278
[2025-11-23 21:21:33] 2025-11-23 20:21:33,767 [wrapper] Test setup, not cleaning
[2025-11-23 21:21:33] 2025-11-23 20:21:33,769 [wrapper] apfmon messages muted
[2025-11-23 21:21:33] 2025-11-23 20:21:33,771 [wrapper] ==== wrapper stdout END ====
[2025-11-23 21:21:33] 2025-11-23 20:21:33,774 [wrapper] ==== wrapper stderr END ====
[2025-11-23 21:21:33]  *** Error codes and diagnostics ***
[2025-11-23 21:21:33]     "exeErrorCode": 0,
[2025-11-23 21:21:33]     "exeErrorDiag": "",
[2025-11-23 21:21:33]     "pilotErrorCode": 0,
[2025-11-23 21:21:33]     "pilotErrorDiag": "",
[2025-11-23 21:21:33]  *** Listing of results directory ***
[2025-11-23 21:21:33] total 1309924
[2025-11-23 21:21:33] -rw-r--r-- 1 boinc boinc      5112 Nov 20 12:00 queuedata.json
[2025-11-23 21:21:33] -rw-r--r-- 1 boinc boinc    576529 Nov 20 12:00 pilot3.tar.gz
[2025-11-23 21:21:33] -rwx------ 1 boinc boinc     36292 Nov 20 12:01 runpilot2-wrapper.sh
[2025-11-23 21:21:33] -rw-r--r-- 1 boinc boinc       100 Nov 23 08:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 21:21:33] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 08:35 run_atlas
[2025-11-23 21:21:33] -rw-r--r-- 1 boinc boinc       105 Nov 23 08:35 job.xml
[2025-11-23 21:21:33] -rw-r--r-- 2 boinc boinc 410016880 Nov 23 08:35 EVNT.47493127._000302.pool.root.1
[2025-11-23 21:21:33] drwxrwx--x 2 boinc boinc      4096 Nov 23 08:35 shared
[2025-11-23 21:21:33] -rw-r--r-- 2 boinc boinc    590101 Nov 23 08:35 input.tar.gz
[2025-11-23 21:21:33] -rw-r--r-- 2 boinc boinc     15847 Nov 23 08:35 start_atlas.sh
[2025-11-23 21:21:33] -rw-r--r-- 1 boinc boinc         0 Nov 23 08:35 boinc_setup_complete
[2025-11-23 21:21:33] -rw-r--r-- 1 boinc boinc      6206 Nov 23 08:35 init_data.xml
[2025-11-23 21:21:33] -rw-r--r-- 1 boinc boinc         0 Nov 23 08:35 boinc_lockfile
[2025-11-23 21:21:33] -rw-r--r-- 1 boinc boinc      2786 Nov 23 08:35 pandaJob.out
[2025-11-23 21:21:33] -rw------- 1 boinc boinc    989784 Nov 23 08:35 agis_schedconf.cvmfs.json
[2025-11-23 21:21:33] drwx------ 5 boinc boinc      4096 Nov 23 08:35 pilot3
[2025-11-23 21:21:33] -rw-r--r-- 1 boinc boinc       532 Nov 23 21:17 boinc_task_state.xml
[2025-11-23 21:21:33] -rw------- 1 boinc boinc        95 Nov 23 21:19 pilot_heartbeat.json
[2025-11-23 21:21:33] -rw------- 1 boinc boinc 912097462 Nov 23 21:19 HITS.47523449._003016.pool.root.1
[2025-11-23 21:21:33] -rw------- 1 boinc boinc      1023 Nov 23 21:20 memory_monitor_summary.json
[2025-11-23 21:21:33] -rw------- 1 boinc boinc   1526164 Nov 23 21:20 agis_ddmendpoints.agis.ALL.json
[2025-11-23 21:21:33] -rw------- 1 boinc boinc   1243174 Nov 23 21:20 log.47523449._003016.job.log.tgz.1
[2025-11-23 21:21:33] -rw------- 1 boinc boinc      8573 Nov 23 21:20 heartbeat.json
[2025-11-23 21:21:33] -rw-r--r-- 1 boinc boinc        28 Nov 23 21:21 wrapper_checkpoint.txt
[2025-11-23 21:21:33] -rw-r--r-- 1 boinc boinc      8192 Nov 23 21:21 boinc_mmap_file
[2025-11-23 21:21:33] -rw------- 1 boinc boinc      4742 Nov 23 21:21 pilotlog.txt
[2025-11-23 21:21:33] -rw------- 1 boinc boinc   6426028 Nov 23 21:21 log.47523449._003016.job.log.1
[2025-11-23 21:21:33] -rw------- 1 boinc boinc       353 Nov 23 21:21 output.list
[2025-11-23 21:21:33] -rw-r--r-- 1 boinc boinc       620 Nov 23 21:21 runtime_log
[2025-11-23 21:21:33] -rw------- 1 boinc boinc   7690240 Nov 23 21:21 result.tar.gz
[2025-11-23 21:21:33] -rw-r--r-- 1 boinc boinc      8898 Nov 23 21:21 runtime_log.err
[2025-11-23 21:21:33] -rw------- 1 boinc boinc       666 Nov 23 21:21 fEFKDmdaHg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmUGKDmeFN0nn.diag
[2025-11-23 21:21:33] -rw-r--r-- 1 boinc boinc      7072 Nov 23 21:21 stderr.txt
[2025-11-23 21:21:33] HITS file was successfully produced:
[2025-11-23 21:21:33] -rw------- 1 boinc boinc 912097462 Nov 23 21:19 shared/HITS.pool.root.1
[2025-11-23 21:21:33]  *** Contents of shared directory: ***
[2025-11-23 21:21:33] total 1299248
[2025-11-23 21:21:33] -rw-r--r-- 2 boinc boinc 410016880 Nov 23 08:35 ATLAS.root_0
[2025-11-23 21:21:33] -rw-r--r-- 2 boinc boinc    590101 Nov 23 08:35 input.tar.gz
[2025-11-23 21:21:33] -rw-r--r-- 2 boinc boinc     15847 Nov 23 08:35 start_atlas.sh
[2025-11-23 21:21:33] -rw------- 1 boinc boinc 912097462 Nov 23 21:19 HITS.pool.root.1
[2025-11-23 21:21:33] -rw------- 1 boinc boinc   7690240 Nov 23 21:21 result.tar.gz
21:21:34 (4013569): run_atlas exited; CPU time 91321.523098
21:21:34 (4013569): called boinc_finish(0)

</stderr_txt>
]]>

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