Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:47:55 (3669326): wrapper (7.7.26015): starting
04:47:55 (3669326): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 04:47:55] Arguments: --nthreads 8
[2025-11-20 04:47:55] Threads: 8
[2025-11-20 04:47:55] Checking for CVMFS
[2025-11-20 04:47:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 04:47:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 04:47:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 04:47:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 04:47:56] 2.11.3.0 733561 19765 221652 153082 3 697 39068107 45568000 13300 130560 0 135254990 99.793 92428980 21802 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-11-20 04:47:56] CVMFS is ok
[2025-11-20 04:47:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 04:47:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 04:47:57] Further information can be found at the LHC@home message board.
[2025-11-20 04:47:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 04:47:57] Checking for apptainer binary...
[2025-11-20 04:47:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 04:47:57] Running /usr/bin/apptainer --version
[2025-11-20 04:47:57] apptainer version 1.4.1-1.el9
[2025-11-20 04:47:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 04:47:58] wns0024.triumf.lcg
[2025-11-20 04:47:58] apptainer works
[2025-11-20 04:47:58] Set ATHENA_PROC_NUMBER=8
[2025-11-20 04:47:58] Set ATHENA_CORE_NUMBER=8
[2025-11-20 04:47:59] Starting ATLAS job with PandaID=6893848605
[2025-11-20 04:47:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 04:54:51]  *** The last 200 lines of the pilot log: ***
[2025-11-20 04:54:51] 2025-11-20 12:54:18,136 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-20 04:54:51] 2025-11-20 12:54:18,136 | INFO     | ..............................
[2025-11-20 04:54:51] 2025-11-20 12:54:18,136 | INFO     | . Timing measurements:
[2025-11-20 04:54:51] 2025-11-20 12:54:18,136 | INFO     | . get job = 0 s
[2025-11-20 04:54:51] 2025-11-20 12:54:18,136 | INFO     | . initial setup = 4 s
[2025-11-20 04:54:51] 2025-11-20 12:54:18,136 | INFO     | . payload setup = 20 s
[2025-11-20 04:54:51] 2025-11-20 12:54:18,137 | INFO     | . stage-in = 0 s
[2025-11-20 04:54:51] 2025-11-20 12:54:18,137 | INFO     | . payload execution = 129 s
[2025-11-20 04:54:51] 2025-11-20 12:54:18,137 | INFO     | . stage-out = 1 s
[2025-11-20 04:54:51] 2025-11-20 12:54:18,137 | INFO     | . log creation = 0 s
[2025-11-20 04:54:51] 2025-11-20 12:54:18,137 | INFO     | ..............................
[2025-11-20 04:54:51] 2025-11-20 12:54:18,137 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 04:54:51] 2025-11-20 12:54:18,137 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893848605/pilotlog.txt
[2025-11-20 04:54:51] 2025-11-20 12:54:18,206 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-20 04:54:51] - Log from pilotlog.txt -
[2025-11-20 04:54:51] 2025-11-20 12:54:18,129 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6893848605/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 04:54:51] 2025-11-20 12:54:18,129 | INFO     | extracted standard info from prmon json
[2025-11-20 04:54:51] 2025-11-20 12:54:18,130 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 04:54:51] 2025-11-20 12:54:18,130 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 04:54:51] 2025-11-20 12:54:18,130 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-20 04:54:51] 2025-11-20 12:54:18,130 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-20 04:54:51] 2025-11-20 12:54:18,135 | WARNING  | wrong length of table data, x=[1763643010.0, 1763643071.0], y=[1703.0, 912091.0] (must be same and length>=4)
[2025-11-20 04:54:51] 2025-11-20 12:54:18,136 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-20 04:54:51] 2025-11-20 12:54:18,136 | INFO     | ..............................
[2025-11-20 04:54:51] 2025-11-20 12:54:18,136 | INFO     | . Timing measurements:
[2025-11-20 04:54:51] 2025-11-20 12:54:18,136 | INFO     | . get job = 0 s
[2025-11-20 04:54:51] 2025-11-20 12:54:18,136 | INFO     | . initial setup = 4 s
[2025-11-20 04:54:51] 2025-11-20 12:54:18,136 | INFO     | . payload setup = 20 s
[2025-11-20 04:54:51] 2025-11-20 12:54:18,137 | INFO     | . stage-in = 0 s
[2025-11-20 04:54:51] 2025-11-20 12:54:18,137 | INFO     | . payload execution = 129 s
[2025-11-20 04:54:51] 2025-11-20 12:54:18,137 | INFO     | . stage-out = 1 s
[2025-11-20 04:54:51] 2025-11-20 12:54:18,137 | INFO     | . log creation = 0 s
[2025-11-20 04:54:51] 2025-11-20 12:54:18,137 | INFO     | ..............................
[2025-11-20 04:54:51] 2025-11-20 12:54:18,137 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 04:54:51] 2025-11-20 12:54:18,137 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893848605/pilotlog.txt
[2025-11-20 04:54:51] 2025-11-20 12:54:18,207 | WARNING  | 
[2025-11-20 04:54:51] [begin log extracts]
[2025-11-20 04:54:51] - Log from pilotlog.txt -
[2025-11-20 04:54:51] 2025-11-20 12:54:18,129 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6893848605/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 04:54:51] 2025-11-20 12:54:18,129 | INFO     | extracted standard info from prmon json
[2025-11-20 04:54:51] 2025-11-20 12:54:18,130 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 04:54:51] 2025-11-20 12:54:18,130 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 04:54:51] 2025-11-20 12:54:18,130 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-20 04:54:51] 2025-11-20 12:54:18,130 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-20 04:54:51] 2025-11-20 12:54:18,135 | WARNING  | wrong length of table data, x=[1763643010.0, 1763643071.0], y=[1703.0, 912091.0] (must be same and length>=4)
[2025-11-20 04:54:51] 2025-11-20 12:54:18,136 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-20 04:54:51] 2025-11-20 12:54:18,136 | INFO     | ..............................
[2025-11-20 04:54:51] 2025-11-20 12:54:18,136 | INFO     | . Timing measurements:
[2025-11-20 04:54:51] 2025-11-20 12:54:18,136 | INFO     | . get job = 0 s
[2025-11-20 04:54:51] 2025-11-20 12:54:18,136 | INFO     | . initial setup = 4 s
[2025-11-20 04:54:51] 2025-11-20 12:54:18,136 | INFO     | . payload setup = 20 s
[2025-11-20 04:54:51] 2025-11-20 12:54:18,137 | INFO     | . stage-in = 0 s
[2025-11-20 04:54:51] 2025-11-20 12:54:18,137 | INFO     | . payload execution = 129 s
[2025-11-20 04:54:51] 2025-11-20 12:54:18,137 | INFO     | . stage-out = 1 s
[2025-11-20 04:54:51] 2025-11-20 12:54:18,137 | INFO     | . log creation = 0 s
[2025-11-20 04:54:51] 2025-11-20 12:54:18,137 | INFO     | ..............................
[2025-11-20 04:54:51] 2025-11-20 12:54:18,137 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 04:54:51] 2025-11-20 12:54:18,137 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893848605/pilotlog.txt
[2025-11-20 04:54:51] [end log extracts]
[2025-11-20 04:54:51] 2025-11-20 12:54:18,207 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-20 04:54:51] 2025-11-20 12:54:18,208 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-20 04:54:51] 2025-11-20 12:54:18,638 | INFO     | 
[2025-11-20 04:54:51] 2025-11-20 12:54:18,638 | INFO     | job summary report
[2025-11-20 04:54:51] 2025-11-20 12:54:18,638 | INFO     | --------------------------------------------------
[2025-11-20 04:54:51] 2025-11-20 12:54:18,638 | INFO     | PanDA job id: 6893848605
[2025-11-20 04:54:51] 2025-11-20 12:54:18,639 | INFO     | task id: 47523449
[2025-11-20 04:54:51] 2025-11-20 12:54:18,639 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-20 04:51:52,471 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-20 04:54:51] 2025-11-20 12:54:18,639 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-20 04:54:51] 2025-11-20 12:54:18,639 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 04:54:51] 2025-11-20 12:54:18,639 | INFO     | pilot state: failed 
[2025-11-20 04:54:51] 2025-11-20 12:54:18,639 | INFO     | transexitcode: 65
[2025-11-20 04:54:51] 2025-11-20 12:54:18,639 | INFO     | exeerrorcode: 65
[2025-11-20 04:54:51] 2025-11-20 12:54:18,639 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-20 04:54:51] 2025-11-20 12:54:18,639 | INFO     | exitcode: 65
[2025-11-20 04:54:51] 2025-11-20 12:54:18,639 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-20 04:54:51] 2025-11-20 12:54:18,639 | INFO     | cpuconsumptiontime: 50 s
[2025-11-20 04:54:51] 2025-11-20 12:54:18,639 | INFO     | nevents: 0
[2025-11-20 04:54:51] 2025-11-20 12:54:18,639 | INFO     | neventsw: 0
[2025-11-20 04:54:51] 2025-11-20 12:54:18,639 | INFO     | pid: 3679788
[2025-11-20 04:54:51] 2025-11-20 12:54:18,640 | INFO     | pgrp: 3679788
[2025-11-20 04:54:51] 2025-11-20 12:54:18,640 | INFO     | corecount: 8
[2025-11-20 04:54:51] 2025-11-20 12:54:18,640 | INFO     | event service: False
[2025-11-20 04:54:51] 2025-11-20 12:54:18,640 | INFO     | sizes: {0: 2296377, 1: 2296975, 2: 2297087, 3: 2297258, 4: 2297286, 5: 2297314, 16: 2297498, 23: 2297788, 27: 2297816, 151: 2323257, 152: 2323233, 153: 2327831, 15
[2025-11-20 04:54:51] 2025-11-20 12:54:18,640 | INFO     | --------------------------------------------------
[2025-11-20 04:54:51] 2025-11-20 12:54:18,640 | INFO     | 
[2025-11-20 04:54:51] 2025-11-20 12:54:18,640 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-20 04:54:51] 2025-11-20 12:54:18,674 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 04:54:51] 2025-11-20 12:54:18,675 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 04:54:51] 2025-11-20 12:54:18,675 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 04:54:51] 2025-11-20 12:54:18,675 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 04:54:51] 2025-11-20 12:54:18,675 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 04:54:51] 2025-11-20 12:54:18,675 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 04:54:51] 2025-11-20 12:54:18,675 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 04:54:51] 2025-11-20 12:54:18,675 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 04:54:51] 2025-11-20 12:54:18,675 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 04:54:51] 2025-11-20 12:54:18,675 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 04:54:51] 2025-11-20 12:54:18,675 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 04:54:51] 2025-11-20 12:54:18,675 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 04:54:51] 2025-11-20 12:54:18,676 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 04:54:51] 2025-11-20 12:54:18,676 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 04:54:51] 2025-11-20 12:54:18,676 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 04:54:51] 2025-11-20 12:54:18,676 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 04:54:51] 2025-11-20 12:54:18,676 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 04:54:51] 2025-11-20 12:54:18,676 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 04:54:51] 2025-11-20 12:54:18,676 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 04:54:51] 2025-11-20 12:54:18,676 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 04:54:51] 2025-11-20 12:54:18,676 | INFO     | job 6893848605 has completed (purged errors)
[2025-11-20 04:54:51] 2025-11-20 12:54:18,676 | INFO     | overall cleanup function is called
[2025-11-20 04:54:51] 2025-11-20 12:54:19,689 | INFO     | --- collectZombieJob: --- 10, [3679788]
[2025-11-20 04:54:51] 2025-11-20 12:54:19,689 | INFO     | zombie collector waiting for pid 3679788
[2025-11-20 04:54:51] 2025-11-20 12:54:19,689 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 04:54:51] 2025-11-20 12:54:19,689 | INFO     | collected zombie processes
[2025-11-20 04:54:51] 2025-11-20 12:54:19,690 | INFO     | will attempt to kill all subprocesses of pid=3679788
[2025-11-20 04:54:51] 2025-11-20 12:54:20,500 | INFO     | process IDs to be killed: [3679788] (in reverse order)
[2025-11-20 04:54:51] 2025-11-20 12:54:20,859 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 04:54:51] 2025-11-20 12:54:20,860 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 04:54:51] 2025-11-20 12:54:20,913 | INFO     | did not find any defunct processes belonging to 3679788
[2025-11-20 04:54:51] 2025-11-20 12:54:20,967 | INFO     | did not find any defunct processes belonging to 3679788
[2025-11-20 04:54:51] 2025-11-20 12:54:20,998 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 04:54:51] 2025-11-20 12:54:20,998 | INFO     | ready for new job
[2025-11-20 04:54:51] 2025-11-20 12:54:20,998 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 04:54:51] 2025-11-20 12:54:20,999 | INFO     | ***************************************
[2025-11-20 04:54:51] 2025-11-20 12:54:20,999 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 04:54:51] 2025-11-20 12:54:21,000 | INFO     | ***************************************
[2025-11-20 04:54:51] 2025-11-20 12:54:21,000 | INFO     | 
[2025-11-20 04:54:51] 2025-11-20 12:54:21,003 | INFO     | architecture information:
[2025-11-20 04:54:51] 2025-11-20 12:54:21,014 | INFO     | executing command: cat /etc/os-release
[2025-11-20 04:54:51] 2025-11-20 12:54:21,245 | INFO     | cat /etc/os-release:
[2025-11-20 04:54:51] NAME="CentOS Linux"
[2025-11-20 04:54:51] VERSION="7 (Core)"
[2025-11-20 04:54:51] ID="centos"
[2025-11-20 04:54:51] ID_LIKE="rhel fedora"
[2025-11-20 04:54:51] VERSION_ID="7"
[2025-11-20 04:54:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 04:54:51] ANSI_COLOR="0;31"
[2025-11-20 04:54:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 04:54:51] HOME_URL="https://www.centos.org/"
[2025-11-20 04:54:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 04:54:51] 
[2025-11-20 04:54:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 04:54:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 04:54:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 04:54:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 04:54:51] 
[2025-11-20 04:54:51] 2025-11-20 12:54:21,246 | INFO     | ***************************************
[2025-11-20 04:54:51] 2025-11-20 12:54:21,749 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-20 04:54:51] 2025-11-20 12:54:21,847 | INFO     | sufficient remaining disk space (1226827628544 B)
[2025-11-20 04:54:51] 2025-11-20 12:54:21,847 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 04:54:51] 2025-11-20 12:54:21,848 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 04:54:51] 2025-11-20 12:54:21,848 | INFO     | update_server=False
[2025-11-20 04:54:51] 2025-11-20 12:54:21,848 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 04:54:51] 2025-11-20 12:54:21,983 | INFO     | all data control threads have been joined
[2025-11-20 04:54:51] 2025-11-20 12:54:22,326 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-20 04:54:51] 2025-11-20 12:54:22,326 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-20 04:54:51] 2025-11-20 12:54:22,326 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 04:54:51] 2025-11-20 12:54:22,327 | INFO     | will abort loop
[2025-11-20 04:54:51] 2025-11-20 12:54:22,576 | INFO     | all job control threads have been joined
[2025-11-20 04:54:51] 2025-11-20 12:54:22,769 | INFO     | all payload control threads have been joined
[2025-11-20 04:54:51] 2025-11-20 12:54:22,791 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 04:54:51] 2025-11-20 12:54:22,854 | INFO     | [job] retrieve thread has finished
[2025-11-20 04:54:51] 2025-11-20 12:54:22,993 | INFO     | [data] control thread has finished
[2025-11-20 04:54:51] 2025-11-20 12:54:23,004 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 04:54:51] 2025-11-20 12:54:23,083 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 04:54:51] 2025-11-20 12:54:23,084 | INFO     | [data] copytool_in thread has finished
[2025-11-20 04:54:51] 2025-11-20 12:54:23,332 | INFO     | [job] job monitor thread has finished
[2025-11-20 04:54:51] 2025-11-20 12:54:23,375 | INFO     | [payload] failed_post thread has finished
[2025-11-20 04:54:51] 2025-11-20 12:54:23,454 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 04:54:51] 2025-11-20 12:54:23,464 | INFO     | [payload] validate_post thread has finished
[2025-11-20 04:54:51] 2025-11-20 12:54:23,515 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 04:54:51] 2025-11-20 12:54:23,583 | INFO     | [job] control thread has finished
[2025-11-20 04:54:51] 2025-11-20 12:54:23,775 | INFO     | [payload] control thread has finished
[2025-11-20 04:54:51] 2025-11-20 12:54:23,953 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 04:54:51] 2025-11-20 12:54:24,321 | INFO     | [job] validate thread has finished
[2025-11-20 04:54:51] 2025-11-20 12:54:24,460 | INFO     | [job] queue monitor thread has finished
[2025-11-20 04:54:51] 2025-11-20 12:54:24,805 | INFO     | [data] copytool_out thread has finished
[2025-11-20 04:54:51] 2025-11-20 12:54:25,015 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 04:54:51] 2025-11-20 12:54:29,024 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 04:54:51] 2025-11-20 12:54:37,764 | INFO     | [monitor] cgroup control has ended
[2025-11-20 04:54:51] 2025-11-20 12:54:39,247 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139933196007232)>', '<ExcThread(monitor, started 139932876117760)>']
[2025-11-20 04:54:51] 2025-11-20 12:54:44,273 | INFO     | all workflow threads have been joined
[2025-11-20 04:54:51] 2025-11-20 12:54:44,273 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 04:54:51] 2025-11-20 12:54:44,274 | INFO     | traces error code: 0
[2025-11-20 04:54:51] 2025-11-20 12:54:44,274 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 04:54:51] 2025-11-20 12:54:50,624 | INFO     | PID=3673065 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-20 04:54:51] 2025-11-20 12:54:50,624 | INFO     | .. there are 26 such processes running
[2025-11-20 04:54:51] 2025-11-20 12:54:50,625 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 04:54:51] 2025-11-20 12:54:50,625 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 04:54:51] 2025-11-20 12:54:50,625 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 04:54:51] 2025-11-20 12:54:50,625 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 04:54:51] 2025-11-20 12:54:50,626 | INFO     | [monitor] control thread has ended
[2025-11-20 04:54:51] 2025-11-20 12:54:50,741 [wrapper] ==== pilot stdout END ====
[2025-11-20 04:54:51] 2025-11-20 12:54:50,792 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 04:54:51] 2025-11-20 12:54:50,814 [wrapper] pilotpid: 3673065
[2025-11-20 04:54:51] 2025-11-20 12:54:50,866 [wrapper] Pilot exit status: 0
[2025-11-20 04:54:51] 2025-11-20 12:54:50,972 [wrapper] pandaids: 6893848605
[2025-11-20 04:54:51] 2025-11-20 12:54:51,075 [wrapper] cleanup supervisor_pilot 3673071 3673066
[2025-11-20 04:54:51] 2025-11-20 12:54:51,104 [wrapper] Test setup, not cleaning
[2025-11-20 04:54:51] 2025-11-20 12:54:51,112 [wrapper] apfmon messages muted
[2025-11-20 04:54:51] 2025-11-20 12:54:51,120 [wrapper] ==== wrapper stdout END ====
[2025-11-20 04:54:51] 2025-11-20 12:54:51,129 [wrapper] ==== wrapper stderr END ====
[2025-11-20 04:54:51]  *** Error codes and diagnostics ***
[2025-11-20 04:54:51]     "exeErrorCode": 65,
[2025-11-20 04:54:51]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-20 04:54:51]     "pilotErrorCode": 1305,
[2025-11-20 04:54:51]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-20 04:54:51]  *** Listing of results directory ***
[2025-11-20 04:54:51] total 405252
[2025-11-20 04:54:51] -rw-r--r--. 1 boinc boinc    576529 Nov 20 02:06 pilot3.tar.gz
[2025-11-20 04:54:51] -rw-r--r--. 1 boinc boinc      5112 Nov 20 02:44 queuedata.json
[2025-11-20 04:54:51] -rwx------. 1 boinc boinc     36292 Nov 20 02:45 runpilot2-wrapper.sh
[2025-11-20 04:54:51] -rw-r--r--. 1 boinc boinc       100 Nov 20 04:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 04:54:51] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 04:47 run_atlas
[2025-11-20 04:54:51] -rw-r--r--. 1 boinc boinc       105 Nov 20 04:47 job.xml
[2025-11-20 04:54:51] -rw-r--r--. 2 boinc boinc 410742746 Nov 20 04:47 EVNT.47493127._000283.pool.root.1
[2025-11-20 04:54:51] -rw-r--r--. 2 boinc boinc     15847 Nov 20 04:47 start_atlas.sh
[2025-11-20 04:54:51] drwxrwx--x. 2 boinc boinc      4096 Nov 20 04:47 shared
[2025-11-20 04:54:51] -rw-r--r--. 2 boinc boinc    590102 Nov 20 04:47 input.tar.gz
[2025-11-20 04:54:51] -rw-r--r--. 1 boinc boinc      6445 Nov 20 04:47 init_data.xml
[2025-11-20 04:54:51] -rw-r--r--. 1 boinc boinc         0 Nov 20 04:47 boinc_lockfile
[2025-11-20 04:54:51] -rw-r--r--. 1 boinc boinc      2783 Nov 20 04:47 pandaJob.out
[2025-11-20 04:54:51] -rw-------. 1 boinc boinc    989448 Nov 20 04:48 agis_schedconf.cvmfs.json
[2025-11-20 04:54:51] -rw-------. 1 boinc boinc   1525063 Nov 20 04:48 agis_ddmendpoints.agis.ALL.json
[2025-11-20 04:54:51] drwx------. 5 boinc boinc      4096 Nov 20 04:48 pilot3
[2025-11-20 04:54:51] -rw-r--r--. 1 boinc boinc       525 Nov 20 04:51 boinc_task_state.xml
[2025-11-20 04:54:51] -rw-------. 1 boinc boinc       989 Nov 20 04:51 memory_monitor_summary.json
[2025-11-20 04:54:51] -rw-------. 1 boinc boinc     50156 Nov 20 04:52 log.47523449._002821.job.log.tgz.1
[2025-11-20 04:54:51] -rw-------. 1 boinc boinc     10327 Nov 20 04:54 heartbeat.json
[2025-11-20 04:54:51] -rw-r--r--. 1 boinc boinc      8192 Nov 20 04:54 boinc_mmap_file
[2025-11-20 04:54:51] -rw-r--r--. 1 boinc boinc        23 Nov 20 04:54 wrapper_checkpoint.txt
[2025-11-20 04:54:51] -rw-------. 1 boinc boinc       823 Nov 20 04:54 pilotlog.txt
[2025-11-20 04:54:51] -rw-------. 1 boinc boinc        95 Nov 20 04:54 pilot_heartbeat.json
[2025-11-20 04:54:51] -rw-------. 1 boinc boinc    108237 Nov 20 04:54 log.47523449._002821.job.log.1
[2025-11-20 04:54:51] -rw-------. 1 boinc boinc       186 Nov 20 04:54 output.list
[2025-11-20 04:54:51] -rw-r--r--. 1 boinc boinc       620 Nov 20 04:54 runtime_log
[2025-11-20 04:54:51] -rw-------. 1 boinc boinc    184320 Nov 20 04:54 result.tar.gz
[2025-11-20 04:54:51] -rw-------. 1 boinc boinc       644 Nov 20 04:54 u18MDmjLHg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXXHKDmpcAB1n.diag
[2025-11-20 04:54:51] -rw-r--r--. 1 boinc boinc      8634 Nov 20 04:54 runtime_log.err
[2025-11-20 04:54:51] -rw-r--r--. 1 boinc boinc     22490 Nov 20 04:54 stderr.txt
[2025-11-20 04:54:51] No HITS result produced
[2025-11-20 04:54:51]  *** Contents of shared directory: ***
[2025-11-20 04:54:51] total 401896
[2025-11-20 04:54:51] -rw-r--r--. 2 boinc boinc 410742746 Nov 20 04:47 ATLAS.root_0
[2025-11-20 04:54:51] -rw-r--r--. 2 boinc boinc     15847 Nov 20 04:47 start_atlas.sh
[2025-11-20 04:54:51] -rw-r--r--. 2 boinc boinc    590102 Nov 20 04:47 input.tar.gz
[2025-11-20 04:54:51] -rw-------. 1 boinc boinc    184320 Nov 20 04:54 result.tar.gz
04:54:52 (3669326): run_atlas exited; CPU time 56.633789
04:54:52 (3669326): called boinc_finish(0)

</stderr_txt>
]]>

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