Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:22:24 (16257): wrapper (7.7.26015): starting
03:22:24 (16257): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 03:22:24] Arguments: --nthreads 8
[2025-11-23 03:22:24] Threads: 8
[2025-11-23 03:22:24] Checking for CVMFS
[2025-11-23 03:22:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 03:22:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 03:22:25] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 03:22:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 03:22:26] 2.11.2.0 5744 280394 141400 153193 1 75 19344173 25165824 4632 130560 2 160453336 99.889 80564006 3402 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-23 03:22:26] CVMFS is ok
[2025-11-23 03:22:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 03:22:26] Checking for apptainer binary...
[2025-11-23 03:22:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 03:22:26] Running /usr/bin/apptainer --version
[2025-11-23 03:22:27] apptainer version 1.3.2-1.el7
[2025-11-23 03:22:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 03:22:41] cg-vwn299.simple-grid.lan
[2025-11-23 03:22:41] apptainer works
[2025-11-23 03:22:41] Set ATHENA_PROC_NUMBER=8
[2025-11-23 03:22:41] Set ATHENA_CORE_NUMBER=8
[2025-11-23 03:22:41] Starting ATLAS job with PandaID=6893848472
[2025-11-23 03:22:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 04:45:06]  *** The last 200 lines of the pilot log: ***
[2025-11-24 04:45:06] 2025-11-24 03:44:12,519 | INFO     | time since job start (91075s) is within the limit (172800.0s)
[2025-11-24 04:45:06] 2025-11-24 03:44:14,532 | INFO     | time since job start (91077s) is within the limit (172800.0s)
[2025-11-24 04:45:06] 2025-11-24 03:44:14,778 | INFO     | monitor loop #6117: job 0:6893848472 is in state 'finished'
[2025-11-24 04:45:06] 2025-11-24 03:44:14,778 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 04:45:06] 2025-11-24 03:44:16,547 | INFO     | time since job start (91079s) is within the limit (172800.0s)
[2025-11-24 04:45:06] 2025-11-24 03:44:17,285 | INFO     | monitor loop #6118: job 0:6893848472 is in state 'finished'
[2025-11-24 04:45:06] 2025-11-24 03:44:17,285 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 04:45:06] 2025-11-24 03:44:18,553 | INFO     | time since job start (91081s) is within the limit (172800.0s)
[2025-11-24 04:45:06] 2025-11-24 03:44:19,792 | INFO     | monitor loop #6119: job 0:6893848472 is in state 'finished'
[2025-11-24 04:45:06] 2025-11-24 03:44:19,792 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 04:45:06] 2025-11-24 03:44:20,559 | INFO     | time since job start (91083s) is within the limit (172800.0s)
[2025-11-24 04:45:06] 2025-11-24 03:44:22,298 | INFO     | monitor loop #6120: job 0:6893848472 is in state 'finished'
[2025-11-24 04:45:06] 2025-11-24 03:44:22,298 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 04:45:06] 2025-11-24 03:44:22,566 | INFO     | time since job start (91085s) is within the limit (172800.0s)
[2025-11-24 04:45:06] 2025-11-24 03:44:23,220 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 04:45:06] 2025-11-24 03:44:23,221 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.9959999999996
[2025-11-24 04:45:06] 2025-11-24 03:44:23,223 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6893848472/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 04:45:06] 2025-11-24 03:44:23,224 | INFO     | extracted standard info from prmon json
[2025-11-24 04:45:06] 2025-11-24 03:44:23,224 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 04:45:06] 2025-11-24 03:44:23,224 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 04:45:06] 2025-11-24 03:44:23,259 | INFO     | fitting pss+swap vs Time
[2025-11-24 04:45:06] 2025-11-24 03:44:23,262 | INFO     | sum of square deviations: 1013401362921.1857
[2025-11-24 04:45:06] 2025-11-24 03:44:23,341 | INFO     | sum of deviations: 3967326634409.6226
[2025-11-24 04:45:06] 2025-11-24 03:44:23,341 | INFO     | mean x: 1763910523.838275
[2025-11-24 04:45:06] 2025-11-24 03:44:23,341 | INFO     | mean y: 2833343.369272237
[2025-11-24 04:45:06] 2025-11-24 03:44:23,341 | INFO     | intersect: -6902633195.34434
[2025-11-24 04:45:06] 2025-11-24 03:44:23,343 | INFO     | chi2: 27.01098393441311
[2025-11-24 04:45:06] 2025-11-24 03:44:23,346 | INFO     | sum of square deviations: 1003193200487.2001
[2025-11-24 04:45:06] 2025-11-24 03:44:23,408 | INFO     | sum of deviations: 4474220732417.354
[2025-11-24 04:45:06] 2025-11-24 03:44:23,408 | INFO     | mean x: 1763910371.3427992
[2025-11-24 04:45:06] 2025-11-24 03:44:23,409 | INFO     | mean y: 2840913.831643002
[2025-11-24 04:45:06] 2025-11-24 03:44:23,409 | INFO     | intersect: -7864162520.5568075
[2025-11-24 04:45:06] 2025-11-24 03:44:23,411 | INFO     | chi2: 23.588328029518284
[2025-11-24 04:45:06] 2025-11-24 03:44:23,411 | INFO     | current chi2=23.588328029518284 (change=12.671348489953463 %)
[2025-11-24 04:45:06] 2025-11-24 03:44:23,411 | INFO     | right removable region: 1478
[2025-11-24 04:45:06] 2025-11-24 03:44:23,413 | INFO     | sum of square deviations: 1003191989027.2017
[2025-11-24 04:45:06] 2025-11-24 03:44:23,480 | INFO     | sum of deviations: 3331567994064.602
[2025-11-24 04:45:06] 2025-11-24 03:44:23,481 | INFO     | mean x: 1763910676.3427992
[2025-11-24 04:45:06] 2025-11-24 03:44:23,481 | INFO     | mean y: 2842840.004732928
[2025-11-24 04:45:06] 2025-11-24 03:44:23,481 | INFO     | intersect: -5855047192.97994
[2025-11-24 04:45:06] 2025-11-24 03:44:23,483 | INFO     | chi2: 22.00469338588836
[2025-11-24 04:45:06] 2025-11-24 03:44:23,483 | INFO     | current chi2=22.00469338588836 (change=18.534276872996585 %)
[2025-11-24 04:45:06] 2025-11-24 03:44:23,483 | INFO     | left removable region: 10
[2025-11-24 04:45:06] 2025-11-24 03:44:23,485 | INFO     | sum of square deviations: 980974640560.2175
[2025-11-24 04:45:06] 2025-11-24 03:44:23,542 | INFO     | sum of deviations: 3370066578389.1045
[2025-11-24 04:45:06] 2025-11-24 03:44:23,542 | INFO     | mean x: 1763910645.852861
[2025-11-24 04:45:06] 2025-11-24 03:44:23,542 | INFO     | mean y: 2860638.6532697547
[2025-11-24 04:45:06] 2025-11-24 03:44:23,542 | INFO     | intersect: -6056925281.458455
[2025-11-24 04:45:06] 2025-11-24 03:44:23,544 | INFO     | chi2: 13.939699996331823
[2025-11-24 04:45:06] 2025-11-24 03:44:23,545 | INFO     | current memory leak: 3.44 B/s (using 1468 data points, chi2=13.94)
[2025-11-24 04:45:06] 2025-11-24 03:44:23,547 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-24 04:45:06] 2025-11-24 03:44:23,548 | INFO     | ..............................
[2025-11-24 04:45:06] 2025-11-24 03:44:23,548 | INFO     | . Timing measurements:
[2025-11-24 04:45:06] 2025-11-24 03:44:23,548 | INFO     | . get job = 0 s
[2025-11-24 04:45:06] 2025-11-24 03:44:23,548 | INFO     | . initial setup = 7 s
[2025-11-24 04:45:06] 2025-11-24 03:44:23,548 | INFO     | . payload setup = 169 s
[2025-11-24 04:45:06] 2025-11-24 03:44:23,548 | INFO     | . stage-in = 0 s
[2025-11-24 04:45:06] 2025-11-24 03:44:23,548 | INFO     | . payload execution = 90616 s
[2025-11-24 04:45:06] 2025-11-24 03:44:23,548 | INFO     | . stage-out = 5 s
[2025-11-24 04:45:06] 2025-11-24 03:44:23,548 | INFO     | . log creation = 2 s
[2025-11-24 04:45:06] 2025-11-24 03:44:23,548 | INFO     | ..............................
[2025-11-24 04:45:06] 2025-11-24 03:44:23,686 | INFO     | 
[2025-11-24 04:45:06] 2025-11-24 03:44:23,686 | INFO     | job summary report
[2025-11-24 04:45:06] 2025-11-24 03:44:23,686 | INFO     | --------------------------------------------------
[2025-11-24 04:45:06] 2025-11-24 03:44:23,686 | INFO     | PanDA job id: 6893848472
[2025-11-24 04:45:06] 2025-11-24 03:44:23,686 | INFO     | task id: 47523449
[2025-11-24 04:45:06] 2025-11-24 03:44:23,686 | INFO     | errors: (none)
[2025-11-24 04:45:06] 2025-11-24 03:44:23,686 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 04:45:06] 2025-11-24 03:44:23,686 | INFO     | pilot state: finished 
[2025-11-24 04:45:06] 2025-11-24 03:44:23,687 | INFO     | transexitcode: 0
[2025-11-24 04:45:06] 2025-11-24 03:44:23,687 | INFO     | exeerrorcode: 0
[2025-11-24 04:45:06] 2025-11-24 03:44:23,687 | INFO     | exeerrordiag: 
[2025-11-24 04:45:06] 2025-11-24 03:44:23,687 | INFO     | exitcode: 0
[2025-11-24 04:45:06] 2025-11-24 03:44:23,687 | INFO     | exitmsg: OK
[2025-11-24 04:45:06] 2025-11-24 03:44:23,687 | INFO     | cpuconsumptiontime: 334959 s
[2025-11-24 04:45:06] 2025-11-24 03:44:23,687 | INFO     | nevents: 1000
[2025-11-24 04:45:06] 2025-11-24 03:44:23,687 | INFO     | neventsw: 0
[2025-11-24 04:45:06] 2025-11-24 03:44:23,687 | INFO     | pid: 26599
[2025-11-24 04:45:06] 2025-11-24 03:44:23,687 | INFO     | pgrp: 26599
[2025-11-24 04:45:06] 2025-11-24 03:44:23,687 | INFO     | corecount: 8
[2025-11-24 04:45:06] 2025-11-24 03:44:23,688 | INFO     | event service: False
[2025-11-24 04:45:06] 2025-11-24 03:44:23,688 | INFO     | sizes: {0: 2297978, 1: 2298663, 2: 2298862, 3: 2298890, 13: 2298890, 24: 2298946, 35: 2299102, 46: 2299130, 56: 2299158, 67: 2299186, 78: 2299214, 89: 2299550, 96:
[2025-11-24 04:45:06] 2025-11-24 03:44:23,688 | INFO     | --------------------------------------------------
[2025-11-24 04:45:06] 2025-11-24 03:44:23,688 | INFO     | 
[2025-11-24 04:45:06] 2025-11-24 03:44:23,688 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-11-24 04:45:06] 2025-11-24 03:44:24,248 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 04:45:06] 2025-11-24 03:44:24,248 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 04:45:06] 2025-11-24 03:44:24,249 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 04:45:06] 2025-11-24 03:44:24,249 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 04:45:06] 2025-11-24 03:44:24,249 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 04:45:06] 2025-11-24 03:44:24,249 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 04:45:06] 2025-11-24 03:44:24,249 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 04:45:06] 2025-11-24 03:44:24,249 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 04:45:06] 2025-11-24 03:44:24,249 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 04:45:06] 2025-11-24 03:44:24,249 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 04:45:06] 2025-11-24 03:44:24,249 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 04:45:06] 2025-11-24 03:44:24,249 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 04:45:06] 2025-11-24 03:44:24,249 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 04:45:06] 2025-11-24 03:44:24,250 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 04:45:06] 2025-11-24 03:44:24,250 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 04:45:06] 2025-11-24 03:44:24,250 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 04:45:06] 2025-11-24 03:44:24,250 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 04:45:06] 2025-11-24 03:44:24,250 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 04:45:06] 2025-11-24 03:44:24,250 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 04:45:06] 2025-11-24 03:44:24,250 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 04:45:06] 2025-11-24 03:44:24,250 | INFO     | job 6893848472 has completed (purged errors)
[2025-11-24 04:45:06] 2025-11-24 03:44:24,250 | INFO     | overall cleanup function is called
[2025-11-24 04:45:06] 2025-11-24 03:44:25,268 | INFO     | --- collectZombieJob: --- 10, [26599]
[2025-11-24 04:45:06] 2025-11-24 03:44:25,269 | INFO     | zombie collector waiting for pid 26599
[2025-11-24 04:45:06] 2025-11-24 03:44:25,269 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 04:45:06] 2025-11-24 03:44:25,269 | INFO     | collected zombie processes
[2025-11-24 04:45:06] 2025-11-24 03:44:25,269 | INFO     | will attempt to kill all subprocesses of pid=26599
[2025-11-24 04:45:06] 2025-11-24 03:44:25,381 | INFO     | process IDs to be killed: [26599] (in reverse order)
[2025-11-24 04:45:06] 2025-11-24 03:44:26,206 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 04:45:06] 2025-11-24 03:44:26,207 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 04:45:06] 2025-11-24 03:44:26,210 | INFO     | did not find any defunct processes belonging to 26599
[2025-11-24 04:45:06] 2025-11-24 03:44:26,213 | INFO     | did not find any defunct processes belonging to 26599
[2025-11-24 04:45:06] 2025-11-24 03:44:26,244 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 04:45:06] 2025-11-24 03:44:26,244 | INFO     | ready for new job
[2025-11-24 04:45:06] 2025-11-24 03:44:26,245 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 04:45:06] 2025-11-24 03:44:26,251 | INFO     | ***************************************
[2025-11-24 04:45:06] 2025-11-24 03:44:26,251 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 04:45:06] 2025-11-24 03:44:26,251 | INFO     | ***************************************
[2025-11-24 04:45:06] 2025-11-24 03:44:26,251 | INFO     | 
[2025-11-24 04:45:06] 2025-11-24 03:44:26,252 | INFO     | pilot is running in a VM
[2025-11-24 04:45:06] 2025-11-24 03:44:26,252 | INFO     | architecture information:
[2025-11-24 04:45:06] 2025-11-24 03:44:26,260 | INFO     | executing command: cat /etc/os-release
[2025-11-24 04:45:06] 2025-11-24 03:44:26,461 | INFO     | cat /etc/os-release:
[2025-11-24 04:45:06] NAME="CentOS Linux"
[2025-11-24 04:45:06] VERSION="7 (Core)"
[2025-11-24 04:45:06] ID="centos"
[2025-11-24 04:45:06] ID_LIKE="rhel fedora"
[2025-11-24 04:45:06] VERSION_ID="7"
[2025-11-24 04:45:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 04:45:06] ANSI_COLOR="0;31"
[2025-11-24 04:45:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 04:45:06] HOME_URL="https://www.centos.org/"
[2025-11-24 04:45:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 04:45:06] 
[2025-11-24 04:45:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 04:45:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 04:45:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 04:45:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 04:45:06] 
[2025-11-24 04:45:06] 2025-11-24 03:44:26,461 | INFO     | ***************************************
[2025-11-24 04:45:06] 2025-11-24 03:44:26,965 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-11-24 04:45:06] 2025-11-24 03:44:27,199 | INFO     | sufficient remaining disk space (495066284032 B)
[2025-11-24 04:45:06] 2025-11-24 03:44:27,200 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 04:45:06] 2025-11-24 03:44:27,200 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 04:45:06] 2025-11-24 03:44:27,200 | INFO     | update_server=False
[2025-11-24 04:45:06] 2025-11-24 03:44:27,200 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 04:45:06] 2025-11-24 03:44:27,204 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 04:45:06] 2025-11-24 03:44:27,345 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 04:45:06] 2025-11-24 03:44:27,345 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 04:45:06] 2025-11-24 03:44:27,345 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 04:45:06] 2025-11-24 03:44:27,345 | INFO     | will abort loop
[2025-11-24 04:45:06] 2025-11-24 03:44:27,502 | INFO     | all data control threads have been joined
[2025-11-24 04:45:06] 2025-11-24 03:44:27,618 | INFO     | all payload control threads have been joined
[2025-11-24 04:45:06] 2025-11-24 03:44:28,207 | INFO     | [job] retrieve thread has finished
[2025-11-24 04:45:06] 2025-11-24 03:44:28,220 | INFO     | [payload] failed_post thread has finished
[2025-11-24 04:45:06] 2025-11-24 03:44:28,352 | INFO     | [job] job monitor thread has finished
[2025-11-24 04:45:06] 2025-11-24 03:44:28,382 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 04:45:06] 2025-11-24 03:44:28,505 | INFO     | [payload] validate_post thread has finished
[2025-11-24 04:45:06] 2025-11-24 03:44:28,508 | INFO     | [data] control thread has finished
[2025-11-24 04:45:06] 2025-11-24 03:44:28,596 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 04:45:06] 2025-11-24 03:44:28,625 | INFO     | [payload] control thread has finished
[2025-11-24 04:45:06] 2025-11-24 03:44:28,695 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 04:45:06] 2025-11-24 03:44:28,697 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 04:45:06] 2025-11-24 03:44:28,820 | INFO     | [job] validate thread has finished
[2025-11-24 04:45:06] 2025-11-24 03:44:28,827 | INFO     | all job control threads have been joined
[2025-11-24 04:45:06] 2025-11-24 03:44:28,839 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 04:45:06] 2025-11-24 03:44:28,980 | INFO     | [data] copytool_in thread has finished
[2025-11-24 04:45:06] 2025-11-24 03:44:29,212 | INFO     | [data] copytool_out thread has finished
[2025-11-24 04:45:06] 2025-11-24 03:44:29,283 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 04:45:06] 2025-11-24 03:44:29,704 | INFO     | [job] queue monitor thread has finished
[2025-11-24 04:45:06] 2025-11-24 03:44:29,834 | INFO     | [job] control thread has finished
[2025-11-24 04:45:06] 2025-11-24 03:44:33,293 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 04:45:06] 2025-11-24 03:44:55,486 | INFO     | [monitor] cgroup control has ended
[2025-11-24 04:45:06] 2025-11-24 03:44:55,806 | INFO     | PID=20021 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 04:45:06] 2025-11-24 03:44:55,806 | INFO     | .. there are 9 such processes running
[2025-11-24 04:45:06] 2025-11-24 03:44:55,806 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 04:45:06] 2025-11-24 03:44:55,806 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 04:45:06] 2025-11-24 03:44:55,806 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 04:45:06] 2025-11-24 03:44:57,194 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140533914883904)>', '<ExcThread(monitor, started 140533292832512)>']
[2025-11-24 04:45:06] 2025-11-24 03:44:57,818 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 04:45:06] 2025-11-24 03:44:57,819 | INFO     | [monitor] control thread has ended
[2025-11-24 04:45:06] 2025-11-24 03:45:02,219 | INFO     | all workflow threads have been joined
[2025-11-24 04:45:06] 2025-11-24 03:45:02,220 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 04:45:06] 2025-11-24 03:45:02,220 | INFO     | traces error code: 0
[2025-11-24 04:45:06] 2025-11-24 03:45:02,220 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 04:45:06] 2025-11-24 03:45:02,559 [wrapper] ==== pilot stdout END ====
[2025-11-24 04:45:06] 2025-11-24 03:45:02,641 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 04:45:06] 2025-11-24 03:45:02,734 [wrapper] pilotpid: 20021
[2025-11-24 04:45:06] 2025-11-24 03:45:02,821 [wrapper] Pilot exit status: 0
[2025-11-24 04:45:06] 2025-11-24 03:45:03,217 [wrapper] pandaids: 6893848472
[2025-11-24 04:45:06] 2025-11-24 03:45:04,123 [wrapper] cleanup supervisor_pilot 21544 20022
[2025-11-24 04:45:06] 2025-11-24 03:45:04,155 [wrapper] Test setup, not cleaning
[2025-11-24 04:45:06] 2025-11-24 03:45:04,214 [wrapper] apfmon messages muted
[2025-11-24 04:45:06] 2025-11-24 03:45:04,286 [wrapper] ==== wrapper stdout END ====
[2025-11-24 04:45:06] 2025-11-24 03:45:04,372 [wrapper] ==== wrapper stderr END ====
[2025-11-24 04:45:06]  *** Error codes and diagnostics ***
[2025-11-24 04:45:06]     "exeErrorCode": 0,
[2025-11-24 04:45:06]     "exeErrorDiag": "",
[2025-11-24 04:45:06]     "pilotErrorCode": 0,
[2025-11-24 04:45:06]     "pilotErrorDiag": "",
[2025-11-24 04:45:06]  *** Listing of results directory ***
[2025-11-24 04:45:06] total 1325404
[2025-11-24 04:45:06] -rw-r--r--. 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-24 04:45:06] -rw-r--r--. 1 boinc boinc      5112 Nov 20 11:36 queuedata.json
[2025-11-24 04:45:06] -rwx------. 1 boinc boinc     36292 Nov 20 11:37 runpilot2-wrapper.sh
[2025-11-24 04:45:06] -rw-r--r--. 1 boinc boinc       100 Nov 23 03:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 04:45:06] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 03:22 run_atlas
[2025-11-24 04:45:06] -rw-r--r--. 1 boinc boinc       105 Nov 23 03:22 job.xml
[2025-11-24 04:45:06] -rw-r--r--. 1 boinc boinc      6389 Nov 23 03:22 init_data.xml
[2025-11-24 04:45:06] -rw-r--r--. 2 boinc boinc 410555740 Nov 23 03:22 EVNT.47493127._000273.pool.root.1
[2025-11-24 04:45:06] -rw-r--r--. 2 boinc boinc     15847 Nov 23 03:22 start_atlas.sh
[2025-11-24 04:45:06] drwxrwx--x. 2 boinc boinc        68 Nov 23 03:22 shared
[2025-11-24 04:45:06] -rw-r--r--. 2 boinc boinc    590101 Nov 23 03:22 input.tar.gz
[2025-11-24 04:45:06] -rw-r--r--. 1 boinc boinc         0 Nov 23 03:22 boinc_lockfile
[2025-11-24 04:45:06] -rw-r--r--. 1 boinc boinc      2785 Nov 23 03:22 pandaJob.out
[2025-11-24 04:45:06] -rw-------. 1 boinc boinc    989784 Nov 23 03:26 agis_schedconf.cvmfs.json
[2025-11-24 04:45:06] drwx------. 5 boinc boinc      4096 Nov 23 03:26 pilot3
[2025-11-24 04:45:06] -rw-r--r--. 1 boinc boinc       533 Nov 24 04:18 boinc_task_state.xml
[2025-11-24 04:45:06] -rw-------. 1 boinc boinc 913355101 Nov 24 04:41 HITS.47523449._002730.pool.root.1
[2025-11-24 04:45:06] -rw-------. 1 boinc boinc      1030 Nov 24 04:42 memory_monitor_summary.json
[2025-11-24 04:45:06] -rw-------. 1 boinc boinc   1526164 Nov 24 04:42 agis_ddmendpoints.agis.ALL.json
[2025-11-24 04:45:06] -rw-------. 1 boinc boinc   2561632 Nov 24 04:42 log.47523449._002730.job.log.tgz.1
[2025-11-24 04:45:06] -rw-------. 1 boinc boinc      7949 Nov 24 04:44 heartbeat.json
[2025-11-24 04:45:06] -rw-------. 1 boinc boinc        95 Nov 24 04:44 pilot_heartbeat.json
[2025-11-24 04:45:06] -rw-r--r--. 1 boinc boinc      8192 Nov 24 04:44 boinc_mmap_file
[2025-11-24 04:45:06] -rw-r--r--. 1 boinc boinc        29 Nov 24 04:44 wrapper_checkpoint.txt
[2025-11-24 04:45:06] -rw-------. 1 boinc boinc      5070 Nov 24 04:45 pilotlog.txt
[2025-11-24 04:45:06] -rw-------. 1 boinc boinc  12133114 Nov 24 04:45 log.47523449._002730.job.log.1
[2025-11-24 04:45:06] -rw-------. 1 boinc boinc       353 Nov 24 04:45 output.list
[2025-11-24 04:45:06] -rw-r--r--. 1 boinc boinc       620 Nov 24 04:45 runtime_log
[2025-11-24 04:45:06] -rw-------. 1 boinc boinc  14714880 Nov 24 04:45 result.tar.gz
[2025-11-24 04:45:06] -rw-r--r--. 1 boinc boinc      8817 Nov 24 04:45 runtime_log.err
[2025-11-24 04:45:06] -rw-------. 1 boinc boinc       662 Nov 24 04:45 PsdMDmgDHg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcWHKDmaFV0Nn.diag
[2025-11-24 04:45:06] -rw-r--r--. 1 boinc boinc     21422 Nov 24 04:45 stderr.txt
[2025-11-24 04:45:06] HITS file was successfully produced:
[2025-11-24 04:45:06] -rw-------. 1 boinc boinc 913355101 Nov 24 04:41 shared/HITS.pool.root.1
[2025-11-24 04:45:06]  *** Contents of shared directory: ***
[2025-11-24 04:45:06] total 1307856
[2025-11-24 04:45:06] -rw-r--r--. 2 boinc boinc 410555740 Nov 23 03:22 ATLAS.root_0
[2025-11-24 04:45:06] -rw-r--r--. 2 boinc boinc     15847 Nov 23 03:22 start_atlas.sh
[2025-11-24 04:45:06] -rw-r--r--. 2 boinc boinc    590101 Nov 23 03:22 input.tar.gz
[2025-11-24 04:45:06] -rw-------. 1 boinc boinc 913355101 Nov 24 04:41 HITS.pool.root.1
[2025-11-24 04:45:06] -rw-------. 1 boinc boinc  14714880 Nov 24 04:45 result.tar.gz
04:45:08 (16257): run_atlas exited; CPU time 335476.214146
04:45:08 (16257): called boinc_finish(0)

</stderr_txt>
]]>

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