Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:41:12 (2401): wrapper (7.7.26015): starting
22:41:12 (2401): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 22:41:12] Arguments: --nthreads 8
[2025-11-22 22:41:12] Threads: 8
[2025-11-22 22:41:12] Checking for CVMFS
[2025-11-22 22:41:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 22:41:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 22:41:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 22:41:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 22:41:15] 2.11.2.0 16343 280000 136804 153185 1 118 14500995 25165824 4292 130560 3 138616110 99.871 75643590 2902 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-22 22:41:15] CVMFS is ok
[2025-11-22 22:41:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 22:41:15] Checking for apptainer binary...
[2025-11-22 22:41:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 22:41:15] Running /usr/bin/apptainer --version
[2025-11-22 22:41:16] apptainer version 1.3.2-1.el7
[2025-11-22 22:41:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 22:41:40] cg-vwn436.simple-grid.lan
[2025-11-22 22:41:40] apptainer works
[2025-11-22 22:41:41] Set ATHENA_PROC_NUMBER=8
[2025-11-22 22:41:41] Set ATHENA_CORE_NUMBER=8
[2025-11-22 22:41:41] Starting ATLAS job with PandaID=6893847995
[2025-11-22 22:41:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 01:05:05]  *** The last 200 lines of the pilot log: ***
[2025-11-24 01:05:05] 2025-11-24 00:04:10,357 | INFO     | time since job start (94740s) is within the limit (172800.0s)
[2025-11-24 01:05:05] 2025-11-24 00:04:12,309 | INFO     | monitor loop #6377: job 0:6893847995 is in state 'finished'
[2025-11-24 01:05:05] 2025-11-24 00:04:12,309 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:05:05] 2025-11-24 00:04:12,369 | INFO     | time since job start (94742s) is within the limit (172800.0s)
[2025-11-24 01:05:05] 2025-11-24 00:04:14,376 | INFO     | time since job start (94744s) is within the limit (172800.0s)
[2025-11-24 01:05:05] 2025-11-24 00:04:14,815 | INFO     | monitor loop #6378: job 0:6893847995 is in state 'finished'
[2025-11-24 01:05:05] 2025-11-24 00:04:14,815 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:05:05] 2025-11-24 00:04:16,383 | INFO     | time since job start (94746s) is within the limit (172800.0s)
[2025-11-24 01:05:05] 2025-11-24 00:04:17,327 | INFO     | monitor loop #6379: job 0:6893847995 is in state 'finished'
[2025-11-24 01:05:05] 2025-11-24 00:04:17,327 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:05:05] 2025-11-24 00:04:17,621 | INFO     | PID=6216 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-24 01:05:05] 2025-11-24 00:04:17,621 | INFO     | .. there are 9 such processes running
[2025-11-24 01:05:05] 2025-11-24 00:04:18,623 | INFO     | time since job start (94748s) is within the limit (172800.0s)
[2025-11-24 01:05:05] 2025-11-24 00:04:19,834 | INFO     | monitor loop #6380: job 0:6893847995 is in state 'finished'
[2025-11-24 01:05:05] 2025-11-24 00:04:19,834 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:05:05] 2025-11-24 00:04:20,075 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 01:05:05] 2025-11-24 00:04:20,076 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-24 01:05:05] 2025-11-24 00:04:20,078 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6893847995/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 01:05:05] 2025-11-24 00:04:20,079 | INFO     | extracted standard info from prmon json
[2025-11-24 01:05:05] 2025-11-24 00:04:20,079 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 01:05:05] 2025-11-24 00:04:20,079 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 01:05:05] 2025-11-24 00:04:20,117 | INFO     | fitting pss+swap vs Time
[2025-11-24 01:05:05] 2025-11-24 00:04:20,120 | INFO     | sum of square deviations: 1141352230114.8704
[2025-11-24 01:05:05] 2025-11-24 00:04:20,204 | INFO     | sum of deviations: 3691127172194.4214
[2025-11-24 01:05:05] 2025-11-24 00:04:20,204 | INFO     | mean x: 1763895473.8367875
[2025-11-24 01:05:05] 2025-11-24 00:04:20,204 | INFO     | mean y: 2837850.0453367876
[2025-11-24 01:05:05] 2025-11-24 00:04:20,205 | INFO     | intersect: -5701590932.412513
[2025-11-24 01:05:05] 2025-11-24 00:04:20,207 | INFO     | chi2: 26.058279658696982
[2025-11-24 01:05:05] 2025-11-24 00:04:20,209 | INFO     | sum of square deviations: 1130300447745.9084
[2025-11-24 01:05:05] 2025-11-24 00:04:20,277 | INFO     | sum of deviations: 4188035529813.084
[2025-11-24 01:05:05] 2025-11-24 00:04:20,277 | INFO     | mean x: 1763895321.3411305
[2025-11-24 01:05:05] 2025-11-24 00:04:20,278 | INFO     | mean y: 2844705.4379467187
[2025-11-24 01:05:05] 2025-11-24 00:04:20,278 | INFO     | intersect: -6532812509.756201
[2025-11-24 01:05:05] 2025-11-24 00:04:20,280 | INFO     | chi2: 22.971623731813203
[2025-11-24 01:05:05] 2025-11-24 00:04:20,280 | INFO     | current chi2=22.971623731813203 (change=11.845202244015383 %)
[2025-11-24 01:05:05] 2025-11-24 00:04:20,280 | INFO     | right removable region: 1538
[2025-11-24 01:05:05] 2025-11-24 00:04:20,282 | INFO     | sum of square deviations: 1130299188705.9087
[2025-11-24 01:05:05] 2025-11-24 00:04:20,355 | INFO     | sum of deviations: 3053199739082.2905
[2025-11-24 01:05:05] 2025-11-24 00:04:20,355 | INFO     | mean x: 1763895626.3411305
[2025-11-24 01:05:05] 2025-11-24 00:04:20,356 | INFO     | mean y: 2846651.2261208575
[2025-11-24 01:05:05] 2025-11-24 00:04:20,356 | INFO     | intersect: -4761843724.495618
[2025-11-24 01:05:05] 2025-11-24 00:04:20,358 | INFO     | chi2: 21.493833466465826
[2025-11-24 01:05:05] 2025-11-24 00:04:20,358 | INFO     | current chi2=21.493833466465826 (change=17.51629904972551 %)
[2025-11-24 01:05:05] 2025-11-24 00:04:20,358 | INFO     | left removable region: 10
[2025-11-24 01:05:05] 2025-11-24 00:04:20,360 | INFO     | sum of square deviations: 1106235652241.9814
[2025-11-24 01:05:05] 2025-11-24 00:04:20,433 | INFO     | sum of deviations: 3092356135841.8765
[2025-11-24 01:05:05] 2025-11-24 00:04:20,433 | INFO     | mean x: 1763895595.8507853
[2025-11-24 01:05:05] 2025-11-24 00:04:20,433 | INFO     | mean y: 2863002.104712042
[2025-11-24 01:05:05] 2025-11-24 00:04:20,433 | INFO     | intersect: -4927906818.736754
[2025-11-24 01:05:05] 2025-11-24 00:04:20,435 | INFO     | chi2: 14.140753887518962
[2025-11-24 01:05:05] 2025-11-24 00:04:20,436 | INFO     | current memory leak: 2.80 B/s (using 1528 data points, chi2=14.14)
[2025-11-24 01:05:05] 2025-11-24 00:04:20,438 | INFO     | could have reported an average CPU frequency of 1999 MHz (52 samples)
[2025-11-24 01:05:05] 2025-11-24 00:04:20,438 | INFO     | ..............................
[2025-11-24 01:05:05] 2025-11-24 00:04:20,439 | INFO     | . Timing measurements:
[2025-11-24 01:05:05] 2025-11-24 00:04:20,439 | INFO     | . get job = 0 s
[2025-11-24 01:05:05] 2025-11-24 00:04:20,439 | INFO     | . initial setup = 7 s
[2025-11-24 01:05:05] 2025-11-24 00:04:20,439 | INFO     | . payload setup = 151 s
[2025-11-24 01:05:05] 2025-11-24 00:04:20,439 | INFO     | . stage-in = 0 s
[2025-11-24 01:05:05] 2025-11-24 00:04:20,439 | INFO     | . payload execution = 94300 s
[2025-11-24 01:05:05] 2025-11-24 00:04:20,439 | INFO     | . stage-out = 6 s
[2025-11-24 01:05:05] 2025-11-24 00:04:20,439 | INFO     | . log creation = 2 s
[2025-11-24 01:05:05] 2025-11-24 00:04:20,439 | INFO     | ..............................
[2025-11-24 01:05:05] 2025-11-24 00:04:20,602 | INFO     | 
[2025-11-24 01:05:05] 2025-11-24 00:04:20,602 | INFO     | job summary report
[2025-11-24 01:05:05] 2025-11-24 00:04:20,602 | INFO     | --------------------------------------------------
[2025-11-24 01:05:05] 2025-11-24 00:04:20,602 | INFO     | PanDA job id: 6893847995
[2025-11-24 01:05:05] 2025-11-24 00:04:20,603 | INFO     | task id: 47523449
[2025-11-24 01:05:05] 2025-11-24 00:04:20,603 | INFO     | errors: (none)
[2025-11-24 01:05:05] 2025-11-24 00:04:20,603 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 01:05:05] 2025-11-24 00:04:20,603 | INFO     | pilot state: finished 
[2025-11-24 01:05:05] 2025-11-24 00:04:20,603 | INFO     | transexitcode: 0
[2025-11-24 01:05:05] 2025-11-24 00:04:20,603 | INFO     | exeerrorcode: 0
[2025-11-24 01:05:05] 2025-11-24 00:04:20,603 | INFO     | exeerrordiag: 
[2025-11-24 01:05:05] 2025-11-24 00:04:20,603 | INFO     | exitcode: 0
[2025-11-24 01:05:05] 2025-11-24 00:04:20,603 | INFO     | exitmsg: OK
[2025-11-24 01:05:05] 2025-11-24 00:04:20,604 | INFO     | cpuconsumptiontime: 345180 s
[2025-11-24 01:05:05] 2025-11-24 00:04:20,604 | INFO     | nevents: 1000
[2025-11-24 01:05:05] 2025-11-24 00:04:20,604 | INFO     | neventsw: 0
[2025-11-24 01:05:05] 2025-11-24 00:04:20,604 | INFO     | pid: 12840
[2025-11-24 01:05:05] 2025-11-24 00:04:20,604 | INFO     | pgrp: 12840
[2025-11-24 01:05:05] 2025-11-24 00:04:20,604 | INFO     | corecount: 8
[2025-11-24 01:05:05] 2025-11-24 00:04:20,604 | INFO     | event service: False
[2025-11-24 01:05:05] 2025-11-24 00:04:20,604 | INFO     | sizes: {0: 2298580, 1: 2298835, 2: 2298835, 12: 2298863, 23: 2298891, 34: 2298919, 45: 2299075, 56: 2299103, 66: 2299131, 77: 2299159, 88: 2299785, 99: 2299785, 94
[2025-11-24 01:05:05] 2025-11-24 00:04:20,605 | INFO     | --------------------------------------------------
[2025-11-24 01:05:05] 2025-11-24 00:04:20,605 | INFO     | 
[2025-11-24 01:05:05] 2025-11-24 00:04:20,605 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-24 01:05:05] 2025-11-24 00:04:20,632 | INFO     | time since job start (94750s) is within the limit (172800.0s)
[2025-11-24 01:05:05] 2025-11-24 00:04:20,961 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 01:05:05] 2025-11-24 00:04:20,961 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 01:05:05] 2025-11-24 00:04:20,961 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 01:05:05] 2025-11-24 00:04:20,961 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 01:05:05] 2025-11-24 00:04:20,961 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 01:05:05] 2025-11-24 00:04:20,961 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 01:05:05] 2025-11-24 00:04:20,962 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 01:05:05] 2025-11-24 00:04:20,962 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 01:05:05] 2025-11-24 00:04:20,962 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 01:05:05] 2025-11-24 00:04:20,962 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 01:05:05] 2025-11-24 00:04:20,962 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 01:05:05] 2025-11-24 00:04:20,962 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 01:05:05] 2025-11-24 00:04:20,962 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 01:05:05] 2025-11-24 00:04:20,962 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 01:05:05] 2025-11-24 00:04:20,963 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 01:05:05] 2025-11-24 00:04:20,963 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 01:05:05] 2025-11-24 00:04:20,963 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 01:05:05] 2025-11-24 00:04:20,963 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 01:05:05] 2025-11-24 00:04:20,963 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 01:05:05] 2025-11-24 00:04:20,963 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 01:05:05] 2025-11-24 00:04:20,964 | INFO     | job 6893847995 has completed (purged errors)
[2025-11-24 01:05:05] 2025-11-24 00:04:20,964 | INFO     | overall cleanup function is called
[2025-11-24 01:05:05] 2025-11-24 00:04:21,983 | INFO     | --- collectZombieJob: --- 10, [12840]
[2025-11-24 01:05:05] 2025-11-24 00:04:21,983 | INFO     | zombie collector waiting for pid 12840
[2025-11-24 01:05:05] 2025-11-24 00:04:21,983 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 01:05:05] 2025-11-24 00:04:21,983 | INFO     | collected zombie processes
[2025-11-24 01:05:05] 2025-11-24 00:04:21,984 | INFO     | will attempt to kill all subprocesses of pid=12840
[2025-11-24 01:05:05] 2025-11-24 00:04:22,131 | INFO     | process IDs to be killed: [12840] (in reverse order)
[2025-11-24 01:05:05] 2025-11-24 00:04:23,009 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 01:05:05] 2025-11-24 00:04:23,009 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 01:05:05] 2025-11-24 00:04:23,014 | INFO     | did not find any defunct processes belonging to 12840
[2025-11-24 01:05:05] 2025-11-24 00:04:23,019 | INFO     | did not find any defunct processes belonging to 12840
[2025-11-24 01:05:05] 2025-11-24 00:04:23,069 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 01:05:05] 2025-11-24 00:04:23,070 | INFO     | ready for new job
[2025-11-24 01:05:05] 2025-11-24 00:04:23,070 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 01:05:05] 2025-11-24 00:04:23,077 | INFO     | ***************************************
[2025-11-24 01:05:05] 2025-11-24 00:04:23,077 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 01:05:05] 2025-11-24 00:04:23,077 | INFO     | ***************************************
[2025-11-24 01:05:05] 2025-11-24 00:04:23,077 | INFO     | 
[2025-11-24 01:05:05] 2025-11-24 00:04:23,078 | INFO     | pilot is running in a VM
[2025-11-24 01:05:05] 2025-11-24 00:04:23,078 | INFO     | architecture information:
[2025-11-24 01:05:05] 2025-11-24 00:04:23,080 | INFO     | executing command: cat /etc/os-release
[2025-11-24 01:05:05] 2025-11-24 00:04:23,318 | INFO     | cat /etc/os-release:
[2025-11-24 01:05:05] NAME="CentOS Linux"
[2025-11-24 01:05:05] VERSION="7 (Core)"
[2025-11-24 01:05:05] ID="centos"
[2025-11-24 01:05:05] ID_LIKE="rhel fedora"
[2025-11-24 01:05:05] VERSION_ID="7"
[2025-11-24 01:05:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 01:05:05] ANSI_COLOR="0;31"
[2025-11-24 01:05:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 01:05:05] HOME_URL="https://www.centos.org/"
[2025-11-24 01:05:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 01:05:05] 
[2025-11-24 01:05:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 01:05:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 01:05:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 01:05:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 01:05:05] 
[2025-11-24 01:05:05] 2025-11-24 00:04:23,318 | INFO     | ***************************************
[2025-11-24 01:05:05] 2025-11-24 00:04:23,822 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-24 01:05:05] 2025-11-24 00:04:24,116 | INFO     | sufficient remaining disk space (494963523584 B)
[2025-11-24 01:05:05] 2025-11-24 00:04:24,117 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 01:05:05] 2025-11-24 00:04:24,117 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 01:05:05] 2025-11-24 00:04:24,117 | INFO     | update_server=False
[2025-11-24 01:05:05] 2025-11-24 00:04:24,117 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 01:05:05] 2025-11-24 00:04:24,118 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:05:05] 2025-11-24 00:04:24,118 | INFO     | aborting loop
[2025-11-24 01:05:05] 2025-11-24 00:04:24,121 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 01:05:05] 2025-11-24 00:04:24,332 | INFO     | all data control threads have been joined
[2025-11-24 01:05:05] 2025-11-24 00:04:24,502 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 01:05:05] 2025-11-24 00:04:24,941 | INFO     | all job control threads have been joined
[2025-11-24 01:05:05] 2025-11-24 00:04:25,124 | INFO     | [job] job monitor thread has finished
[2025-11-24 01:05:05] 2025-11-24 00:04:25,128 | INFO     | [job] retrieve thread has finished
[2025-11-24 01:05:05] 2025-11-24 00:04:25,166 | INFO     | [payload] failed_post thread has finished
[2025-11-24 01:05:05] 2025-11-24 00:04:25,186 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 01:05:05] 2025-11-24 00:04:25,338 | INFO     | [data] control thread has finished
[2025-11-24 01:05:05] 2025-11-24 00:04:25,414 | INFO     | all payload control threads have been joined
[2025-11-24 01:05:05] 2025-11-24 00:04:25,528 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 01:05:05] 2025-11-24 00:04:25,551 | INFO     | [job] validate thread has finished
[2025-11-24 01:05:05] 2025-11-24 00:04:25,618 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:05:05] 2025-11-24 00:04:25,820 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 01:05:05] 2025-11-24 00:04:25,947 | INFO     | [job] control thread has finished
[2025-11-24 01:05:05] 2025-11-24 00:04:25,971 | INFO     | [data] copytool_in thread has finished
[2025-11-24 01:05:05] 2025-11-24 00:04:26,129 | INFO     | [data] copytool_out thread has finished
[2025-11-24 01:05:05] 2025-11-24 00:04:26,247 | INFO     | [payload] validate_post thread has finished
[2025-11-24 01:05:05] 2025-11-24 00:04:26,315 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 01:05:05] 2025-11-24 00:04:26,420 | INFO     | [payload] control thread has finished
[2025-11-24 01:05:05] 2025-11-24 00:04:26,624 | INFO     | [job] queue monitor thread has finished
[2025-11-24 01:05:05] 2025-11-24 00:04:28,513 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 01:05:05] 2025-11-24 00:04:53,854 | INFO     | PID=6216 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-24 01:05:05] 2025-11-24 00:04:53,854 | INFO     | .. there are 9 such processes running
[2025-11-24 01:05:05] 2025-11-24 00:04:53,854 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 01:05:05] 2025-11-24 00:04:53,854 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 01:05:05] 2025-11-24 00:04:53,854 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 01:05:05] 2025-11-24 00:04:55,007 | INFO     | [monitor] cgroup control has ended
[2025-11-24 01:05:05] 2025-11-24 00:04:55,937 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139853756217152)>', '<ExcThread(monitor, started 139853169673984)>']
[2025-11-24 01:05:05] 2025-11-24 00:04:56,872 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 01:05:05] 2025-11-24 00:04:56,872 | INFO     | [monitor] control thread has ended
[2025-11-24 01:05:05] 2025-11-24 00:05:00,963 | INFO     | all workflow threads have been joined
[2025-11-24 01:05:05] 2025-11-24 00:05:00,963 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 01:05:05] 2025-11-24 00:05:00,964 | INFO     | traces error code: 0
[2025-11-24 01:05:05] 2025-11-24 00:05:00,964 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 01:05:05] 2025-11-24 00:05:01,365 [wrapper] ==== pilot stdout END ====
[2025-11-24 01:05:05] 2025-11-24 00:05:01,491 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 01:05:05] 2025-11-24 00:05:01,576 [wrapper] pilotpid: 6216
[2025-11-24 01:05:05] 2025-11-24 00:05:01,648 [wrapper] Pilot exit status: 0
[2025-11-24 01:05:05] 2025-11-24 00:05:01,989 [wrapper] pandaids: 6893847995
[2025-11-24 01:05:05] 2025-11-24 00:05:02,844 [wrapper] cleanup supervisor_pilot  8732 6217
[2025-11-24 01:05:05] 2025-11-24 00:05:02,916 [wrapper] Test setup, not cleaning
[2025-11-24 01:05:05] 2025-11-24 00:05:03,020 [wrapper] apfmon messages muted
[2025-11-24 01:05:05] 2025-11-24 00:05:03,117 [wrapper] ==== wrapper stdout END ====
[2025-11-24 01:05:05] 2025-11-24 00:05:03,162 [wrapper] ==== wrapper stderr END ====
[2025-11-24 01:05:05]  *** Error codes and diagnostics ***
[2025-11-24 01:05:05]     "exeErrorCode": 0,
[2025-11-24 01:05:05]     "exeErrorDiag": "",
[2025-11-24 01:05:05]     "pilotErrorCode": 0,
[2025-11-24 01:05:05]     "pilotErrorDiag": "",
[2025-11-24 01:05:05]  *** Listing of results directory ***
[2025-11-24 01:05:05] total 1337520
[2025-11-24 01:05:05] -rw-r--r--. 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-24 01:05:05] -rwx------. 1 boinc boinc     36292 Nov 20 11:27 runpilot2-wrapper.sh
[2025-11-24 01:05:05] -rw-r--r--. 1 boinc boinc      5112 Nov 20 11:27 queuedata.json
[2025-11-24 01:05:05] -rw-r--r--. 1 boinc boinc       100 Nov 22 22:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 01:05:05] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 22:41 run_atlas
[2025-11-24 01:05:05] -rw-r--r--. 1 boinc boinc       105 Nov 22 22:41 job.xml
[2025-11-24 01:05:05] -rw-r--r--. 1 boinc boinc      6390 Nov 22 22:41 init_data.xml
[2025-11-24 01:05:05] -rw-r--r--. 2 boinc boinc 408245439 Nov 22 22:41 EVNT.47493127._000251.pool.root.1
[2025-11-24 01:05:05] -rw-r--r--. 2 boinc boinc     15847 Nov 22 22:41 start_atlas.sh
[2025-11-24 01:05:05] drwxrwx--x. 2 boinc boinc        68 Nov 22 22:41 shared
[2025-11-24 01:05:05] -rw-r--r--. 2 boinc boinc    590101 Nov 22 22:41 input.tar.gz
[2025-11-24 01:05:05] -rw-r--r--. 1 boinc boinc         0 Nov 22 22:41 boinc_lockfile
[2025-11-24 01:05:05] -rw-r--r--. 1 boinc boinc      2786 Nov 22 22:41 pandaJob.out
[2025-11-24 01:05:05] -rw-------. 1 boinc boinc    989768 Nov 22 22:45 agis_schedconf.cvmfs.json
[2025-11-24 01:05:05] drwx------. 5 boinc boinc      4096 Nov 22 22:45 pilot3
[2025-11-24 01:05:05] -rw-r--r--. 1 boinc boinc       533 Nov 24 00:34 boinc_task_state.xml
[2025-11-24 01:05:05] -rw-------. 1 boinc boinc 926954501 Nov 24 01:01 HITS.47523449._002503.pool.root.1
[2025-11-24 01:05:05] -rw-------. 1 boinc boinc      1033 Nov 24 01:02 memory_monitor_summary.json
[2025-11-24 01:05:05] -rw-------. 1 boinc boinc   1526164 Nov 24 01:02 agis_ddmendpoints.agis.ALL.json
[2025-11-24 01:05:05] -rw-------. 1 boinc boinc   2610041 Nov 24 01:02 log.47523449._002503.job.log.tgz.1
[2025-11-24 01:05:05] -rw-------. 1 boinc boinc        95 Nov 24 01:03 pilot_heartbeat.json
[2025-11-24 01:05:05] -rw-------. 1 boinc boinc      8625 Nov 24 01:04 heartbeat.json
[2025-11-24 01:05:05] -rw-r--r--. 1 boinc boinc      8192 Nov 24 01:04 boinc_mmap_file
[2025-11-24 01:05:05] -rw-r--r--. 1 boinc boinc        29 Nov 24 01:04 wrapper_checkpoint.txt
[2025-11-24 01:05:05] -rw-------. 1 boinc boinc      4883 Nov 24 01:05 pilotlog.txt
[2025-11-24 01:05:05] -rw-------. 1 boinc boinc  12644223 Nov 24 01:05 log.47523449._002503.job.log.1
[2025-11-24 01:05:05] -rw-------. 1 boinc boinc       353 Nov 24 01:05 output.list
[2025-11-24 01:05:05] -rw-r--r--. 1 boinc boinc       620 Nov 24 01:05 runtime_log
[2025-11-24 01:05:05] -rw-------. 1 boinc boinc  15278080 Nov 24 01:05 result.tar.gz
[2025-11-24 01:05:05] -rw-r--r--. 1 boinc boinc      8817 Nov 24 01:05 runtime_log.err
[2025-11-24 01:05:05] -rw-------. 1 boinc boinc       662 Nov 24 01:05 n6TKDmp3Gg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWTHKDmUBGewn.diag
[2025-11-24 01:05:05] -rw-r--r--. 1 boinc boinc     21509 Nov 24 01:05 stderr.txt
[2025-11-24 01:05:05] HITS file was successfully produced:
[2025-11-24 01:05:05] -rw-------. 1 boinc boinc 926954501 Nov 24 01:01 shared/HITS.pool.root.1
[2025-11-24 01:05:05]  *** Contents of shared directory: ***
[2025-11-24 01:05:05] total 1319428
[2025-11-24 01:05:05] -rw-r--r--. 2 boinc boinc 408245439 Nov 22 22:41 ATLAS.root_0
[2025-11-24 01:05:05] -rw-r--r--. 2 boinc boinc     15847 Nov 22 22:41 start_atlas.sh
[2025-11-24 01:05:05] -rw-r--r--. 2 boinc boinc    590101 Nov 22 22:41 input.tar.gz
[2025-11-24 01:05:05] -rw-------. 1 boinc boinc 926954501 Nov 24 01:01 HITS.pool.root.1
[2025-11-24 01:05:05] -rw-------. 1 boinc boinc  15278080 Nov 24 01:05 result.tar.gz
01:05:07 (2401): run_atlas exited; CPU time 345680.697233
01:05:07 (2401): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN