Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:28:47 (22482): wrapper (7.7.26015): starting
23:28:47 (22482): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 23:28:47] Arguments: --nthreads 8
[2025-11-22 23:28:47] Threads: 8
[2025-11-22 23:28:47] Checking for CVMFS
[2025-11-22 23:28:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 23:28:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 23:28:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 23:28:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 23:28:50] 2.11.2.0 23762 280230 142072 153187 0 179 24577164 25165824 4632 130560 2 128998168 99.867 84379412 3289 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-22 23:28:50] CVMFS is ok
[2025-11-22 23:28:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 23:28:50] Checking for apptainer binary...
[2025-11-22 23:28:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 23:28:50] Running /usr/bin/apptainer --version
[2025-11-22 23:28:50] apptainer version 1.3.2-1.el7
[2025-11-22 23:28:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 23:28:56] cg-vwn242.simple-grid.lan
[2025-11-22 23:28:56] apptainer works
[2025-11-22 23:28:56] Set ATHENA_PROC_NUMBER=8
[2025-11-22 23:28:56] Set ATHENA_CORE_NUMBER=8
[2025-11-22 23:28:56] Starting ATLAS job with PandaID=6893845831
[2025-11-22 23:28:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 00:32:32]  *** The last 200 lines of the pilot log: ***
[2025-11-24 00:32:32] 2025-11-23 23:31:57,124 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 00:32:32] 2025-11-23 23:31:57,124 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 00:32:32] 2025-11-23 23:31:57,186 | INFO     | fitting pss+swap vs Time
[2025-11-24 00:32:32] 2025-11-23 23:31:57,189 | INFO     | sum of square deviations: 976968785098.5468
[2025-11-24 00:32:32] 2025-11-23 23:31:57,328 | INFO     | sum of deviations: 3636132794864.2324
[2025-11-24 00:32:32] 2025-11-23 23:31:57,329 | INFO     | mean x: 1763895980.8444748
[2025-11-24 00:32:32] 2025-11-23 23:31:57,329 | INFO     | mean y: 2867827.2510231924
[2025-11-24 00:32:32] 2025-11-23 23:31:57,329 | INFO     | intersect: -6562091177.074638
[2025-11-24 00:32:32] 2025-11-23 23:31:57,331 | INFO     | chi2: 8.44033398792695
[2025-11-24 00:32:32] 2025-11-23 23:31:57,333 | INFO     | sum of square deviations: 967007180851.9712
[2025-11-24 00:32:32] 2025-11-23 23:31:57,421 | INFO     | sum of deviations: 4125741691155.181
[2025-11-24 00:32:32] 2025-11-23 23:31:57,421 | INFO     | mean x: 1763895828.349076
[2025-11-24 00:32:32] 2025-11-23 23:31:57,422 | INFO     | mean y: 2875321.6153319646
[2025-11-24 00:32:32] 2025-11-23 23:31:57,422 | INFO     | intersect: -7522796361.052869
[2025-11-24 00:32:32] 2025-11-23 23:31:57,424 | INFO     | chi2: 5.337555448304698
[2025-11-24 00:32:32] 2025-11-23 23:31:57,424 | INFO     | current chi2=5.337555448304698 (change=36.761324185280635 %)
[2025-11-24 00:32:32] 2025-11-23 23:31:57,426 | INFO     | sum of square deviations: 957113531367.8395
[2025-11-24 00:32:32] 2025-11-23 23:31:57,524 | INFO     | PID=26307 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 00:32:32] 2025-11-23 23:31:57,524 | INFO     | .. there are 9 such processes running
[2025-11-24 00:32:32] 2025-11-23 23:31:57,525 | INFO     | sum of deviations: 4398428435757.124
[2025-11-24 00:32:32] 2025-11-23 23:31:57,525 | INFO     | mean x: 1763895675.8537087
[2025-11-24 00:32:32] 2025-11-23 23:31:57,525 | INFO     | mean y: 2879521.681318681
[2025-11-24 00:32:32] 2025-11-23 23:31:57,526 | INFO     | intersect: -8103127387.756339
[2025-11-24 00:32:32] 2025-11-23 23:31:57,527 | INFO     | chi2: 4.128621790700672
[2025-11-24 00:32:32] 2025-11-23 23:31:57,527 | INFO     | current chi2=4.128621790700672 (change=22.649575621514245 %)
[2025-11-24 00:32:32] 2025-11-23 23:31:57,528 | INFO     | right removable region: 1455
[2025-11-24 00:32:32] 2025-11-23 23:31:57,530 | INFO     | sum of square deviations: 967005978541.97
[2025-11-24 00:32:32] 2025-11-23 23:31:57,587 | INFO     | sum of deviations: 3116777744521.856
[2025-11-24 00:32:32] 2025-11-23 23:31:57,587 | INFO     | mean x: 1763896133.349076
[2025-11-24 00:32:32] 2025-11-23 23:31:57,587 | INFO     | mean y: 2875774.0787132103
[2025-11-24 00:32:32] 2025-11-23 23:31:57,587 | INFO     | intersect: -5682375748.729681
[2025-11-24 00:32:32] 2025-11-23 23:31:57,589 | INFO     | chi2: 5.095296670206057
[2025-11-24 00:32:32] 2025-11-23 23:31:57,589 | INFO     | current chi2=5.095296670206057 (change=39.63157527303579 %)
[2025-11-24 00:32:32] 2025-11-23 23:31:57,591 | INFO     | sum of square deviations: 957111571993.3596
[2025-11-24 00:32:32] 2025-11-23 23:31:57,646 | INFO     | sum of deviations: 2966857185989.7695
[2025-11-24 00:32:32] 2025-11-23 23:31:57,646 | INFO     | mean x: 1763896285.8502748
[2025-11-24 00:32:32] 2025-11-23 23:31:57,647 | INFO     | mean y: 2878082.833791209
[2025-11-24 00:32:32] 2025-11-23 23:31:57,647 | INFO     | intersect: -5464852664.707375
[2025-11-24 00:32:32] 2025-11-23 23:31:57,648 | INFO     | chi2: 4.817550000912194
[2025-11-24 00:32:32] 2025-11-23 23:31:57,649 | INFO     | current chi2=4.817550000912194 (change=5.451040190023543 %)
[2025-11-24 00:32:32] 2025-11-23 23:31:57,649 | INFO     | left removable region: 20
[2025-11-24 00:32:32] 2025-11-23 23:31:57,651 | INFO     | sum of square deviations: 916293977924.4557
[2025-11-24 00:32:32] 2025-11-23 23:31:57,714 | INFO     | sum of deviations: 3606240744260.439
[2025-11-24 00:32:32] 2025-11-23 23:31:57,714 | INFO     | mean x: 1763896255.359582
[2025-11-24 00:32:32] 2025-11-23 23:31:57,714 | INFO     | mean y: 2892681.5902439025
[2025-11-24 00:32:32] 2025-11-23 23:31:57,714 | INFO     | intersect: -6939240190.585609
[2025-11-24 00:32:32] 2025-11-23 23:31:57,716 | INFO     | chi2: 0.3741009838559677
[2025-11-24 00:32:32] 2025-11-23 23:31:57,717 | INFO     | current memory leak: 3.94 B/s (using 1435 data points, chi2=0.37)
[2025-11-24 00:32:32] 2025-11-23 23:31:57,719 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-24 00:32:32] 2025-11-23 23:31:57,719 | INFO     | ..............................
[2025-11-24 00:32:32] 2025-11-23 23:31:57,719 | INFO     | . Timing measurements:
[2025-11-24 00:32:32] 2025-11-23 23:31:57,719 | INFO     | . get job = 0 s
[2025-11-24 00:32:32] 2025-11-23 23:31:57,719 | INFO     | . initial setup = 14 s
[2025-11-24 00:32:32] 2025-11-23 23:31:57,720 | INFO     | . payload setup = 163 s
[2025-11-24 00:32:32] 2025-11-23 23:31:57,720 | INFO     | . stage-in = 0 s
[2025-11-24 00:32:32] 2025-11-23 23:31:57,720 | INFO     | . payload execution = 89551 s
[2025-11-24 00:32:32] 2025-11-23 23:31:57,720 | INFO     | . stage-out = 4 s
[2025-11-24 00:32:32] 2025-11-23 23:31:57,720 | INFO     | . log creation = 1 s
[2025-11-24 00:32:32] 2025-11-23 23:31:57,720 | INFO     | ..............................
[2025-11-24 00:32:32] 2025-11-23 23:31:57,721 | INFO     | monitor loop #6025: job 0:6893845831 is in state 'finished'
[2025-11-24 00:32:32] 2025-11-23 23:31:57,721 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 00:32:32] 2025-11-23 23:31:57,842 | INFO     | 
[2025-11-24 00:32:32] 2025-11-23 23:31:57,842 | INFO     | job summary report
[2025-11-24 00:32:32] 2025-11-23 23:31:57,843 | INFO     | --------------------------------------------------
[2025-11-24 00:32:32] 2025-11-23 23:31:57,843 | INFO     | PanDA job id: 6893845831
[2025-11-24 00:32:32] 2025-11-23 23:31:57,843 | INFO     | task id: 47523449
[2025-11-24 00:32:32] 2025-11-23 23:31:57,843 | INFO     | errors: (none)
[2025-11-24 00:32:32] 2025-11-23 23:31:57,843 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 00:32:32] 2025-11-23 23:31:57,843 | INFO     | pilot state: finished 
[2025-11-24 00:32:32] 2025-11-23 23:31:57,843 | INFO     | transexitcode: 0
[2025-11-24 00:32:32] 2025-11-23 23:31:57,843 | INFO     | exeerrorcode: 0
[2025-11-24 00:32:32] 2025-11-23 23:31:57,843 | INFO     | exeerrordiag: 
[2025-11-24 00:32:32] 2025-11-23 23:31:57,843 | INFO     | exitcode: 0
[2025-11-24 00:32:32] 2025-11-23 23:31:57,844 | INFO     | exitmsg: OK
[2025-11-24 00:32:32] 2025-11-23 23:31:57,844 | INFO     | cpuconsumptiontime: 334624 s
[2025-11-24 00:32:32] 2025-11-23 23:31:57,844 | INFO     | nevents: 1000
[2025-11-24 00:32:32] 2025-11-23 23:31:57,844 | INFO     | neventsw: 0
[2025-11-24 00:32:32] 2025-11-23 23:31:57,844 | INFO     | pid: 425
[2025-11-24 00:32:32] 2025-11-23 23:31:57,844 | INFO     | pgrp: 425
[2025-11-24 00:32:32] 2025-11-23 23:31:57,844 | INFO     | corecount: 8
[2025-11-24 00:32:32] 2025-11-23 23:31:57,844 | INFO     | event service: False
[2025-11-24 00:32:32] 2025-11-23 23:31:57,844 | INFO     | sizes: {0: 2298580, 1: 2298835, 12: 2298835, 23: 2298863, 34: 2298891, 44: 2298919, 55: 2299075, 66: 2299103, 77: 2299131, 88: 2299187, 98: 2299215, 106: 2299785, 
[2025-11-24 00:32:32] 2025-11-23 23:31:57,844 | INFO     | --------------------------------------------------
[2025-11-24 00:32:32] 2025-11-23 23:31:57,844 | INFO     | 
[2025-11-24 00:32:32] 2025-11-23 23:31:57,845 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-24 00:32:32] 2025-11-23 23:31:57,883 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 00:32:32] 2025-11-23 23:31:57,883 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 00:32:32] 2025-11-23 23:31:57,883 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 00:32:32] 2025-11-23 23:31:57,884 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 00:32:32] 2025-11-23 23:31:57,884 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 00:32:32] 2025-11-23 23:31:57,884 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 00:32:32] 2025-11-23 23:31:57,884 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 00:32:32] 2025-11-23 23:31:57,884 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 00:32:32] 2025-11-23 23:31:57,884 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 00:32:32] 2025-11-23 23:31:57,884 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 00:32:32] 2025-11-23 23:31:57,884 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 00:32:32] 2025-11-23 23:31:57,884 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 00:32:32] 2025-11-23 23:31:57,884 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 00:32:32] 2025-11-23 23:31:57,884 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 00:32:32] 2025-11-23 23:31:57,884 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 00:32:32] 2025-11-23 23:31:57,885 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 00:32:32] 2025-11-23 23:31:57,885 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 00:32:32] 2025-11-23 23:31:57,885 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 00:32:32] 2025-11-23 23:31:57,885 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 00:32:32] 2025-11-23 23:31:57,885 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 00:32:32] 2025-11-23 23:31:57,885 | INFO     | job 6893845831 has completed (purged errors)
[2025-11-24 00:32:32] 2025-11-23 23:31:57,885 | INFO     | overall cleanup function is called
[2025-11-24 00:32:32] 2025-11-23 23:31:58,903 | INFO     | --- collectZombieJob: --- 10, [425]
[2025-11-24 00:32:32] 2025-11-23 23:31:58,903 | INFO     | zombie collector waiting for pid 425
[2025-11-24 00:32:32] 2025-11-23 23:31:58,904 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 00:32:32] 2025-11-23 23:31:58,904 | INFO     | collected zombie processes
[2025-11-24 00:32:32] 2025-11-23 23:31:58,904 | INFO     | will attempt to kill all subprocesses of pid=425
[2025-11-24 00:32:32] 2025-11-23 23:31:59,012 | INFO     | process IDs to be killed: [425] (in reverse order)
[2025-11-24 00:32:32] 2025-11-23 23:31:59,234 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 00:32:32] 2025-11-23 23:31:59,235 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 00:32:32] 2025-11-23 23:31:59,239 | INFO     | did not find any defunct processes belonging to 425
[2025-11-24 00:32:32] 2025-11-23 23:31:59,241 | INFO     | did not find any defunct processes belonging to 425
[2025-11-24 00:32:32] 2025-11-23 23:31:59,243 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 00:32:32] 2025-11-23 23:31:59,243 | INFO     | ready for new job
[2025-11-24 00:32:32] 2025-11-23 23:31:59,244 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 00:32:32] 2025-11-23 23:31:59,250 | INFO     | ***************************************
[2025-11-24 00:32:32] 2025-11-23 23:31:59,250 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 00:32:32] 2025-11-23 23:31:59,251 | INFO     | ***************************************
[2025-11-24 00:32:32] 2025-11-23 23:31:59,251 | INFO     | 
[2025-11-24 00:32:32] 2025-11-23 23:31:59,251 | INFO     | pilot is running in a VM
[2025-11-24 00:32:32] 2025-11-23 23:31:59,251 | INFO     | architecture information:
[2025-11-24 00:32:32] 2025-11-23 23:31:59,252 | INFO     | executing command: cat /etc/os-release
[2025-11-24 00:32:32] 2025-11-23 23:31:59,283 | INFO     | cat /etc/os-release:
[2025-11-24 00:32:32] NAME="CentOS Linux"
[2025-11-24 00:32:32] VERSION="7 (Core)"
[2025-11-24 00:32:32] ID="centos"
[2025-11-24 00:32:32] ID_LIKE="rhel fedora"
[2025-11-24 00:32:32] VERSION_ID="7"
[2025-11-24 00:32:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 00:32:32] ANSI_COLOR="0;31"
[2025-11-24 00:32:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 00:32:32] HOME_URL="https://www.centos.org/"
[2025-11-24 00:32:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 00:32:32] 
[2025-11-24 00:32:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 00:32:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 00:32:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 00:32:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 00:32:32] 
[2025-11-24 00:32:32] 2025-11-23 23:31:59,284 | INFO     | ***************************************
[2025-11-24 00:32:32] 2025-11-23 23:31:59,788 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-24 00:32:32] 2025-11-23 23:31:59,826 | INFO     | sufficient remaining disk space (495093547008 B)
[2025-11-24 00:32:32] 2025-11-23 23:31:59,827 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 00:32:32] 2025-11-23 23:31:59,827 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 00:32:32] 2025-11-23 23:31:59,827 | INFO     | update_server=False
[2025-11-24 00:32:32] 2025-11-23 23:31:59,827 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 00:32:32] 2025-11-23 23:31:59,828 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 00:32:32] 2025-11-23 23:31:59,828 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 00:32:32] 2025-11-23 23:31:59,964 | INFO     | all data control threads have been joined
[2025-11-24 00:32:32] 2025-11-23 23:32:00,226 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 00:32:32] 2025-11-23 23:32:00,227 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 00:32:32] 2025-11-23 23:32:00,227 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 00:32:32] 2025-11-23 23:32:00,227 | INFO     | will abort loop
[2025-11-24 00:32:32] 2025-11-23 23:32:00,400 | INFO     | all job control threads have been joined
[2025-11-24 00:32:32] 2025-11-23 23:32:00,833 | INFO     | [job] retrieve thread has finished
[2025-11-24 00:32:32] 2025-11-23 23:32:00,835 | INFO     | [job] queue monitor thread has finished
[2025-11-24 00:32:32] 2025-11-23 23:32:00,892 | INFO     | all payload control threads have been joined
[2025-11-24 00:32:32] 2025-11-23 23:32:00,944 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 00:32:32] 2025-11-23 23:32:00,970 | INFO     | [data] control thread has finished
[2025-11-24 00:32:32] 2025-11-23 23:32:01,184 | INFO     | [payload] failed_post thread has finished
[2025-11-24 00:32:32] 2025-11-23 23:32:01,233 | INFO     | [job] job monitor thread has finished
[2025-11-24 00:32:32] 2025-11-23 23:32:01,405 | INFO     | [job] control thread has finished
[2025-11-24 00:32:32] 2025-11-23 23:32:01,471 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 00:32:32] 2025-11-23 23:32:01,481 | INFO     | [data] copytool_in thread has finished
[2025-11-24 00:32:32] 2025-11-23 23:32:01,516 | INFO     | [job] validate thread has finished
[2025-11-24 00:32:32] 2025-11-23 23:32:01,695 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 00:32:32] 2025-11-23 23:32:01,744 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 00:32:32] 2025-11-23 23:32:01,897 | INFO     | [payload] control thread has finished
[2025-11-24 00:32:32] 2025-11-23 23:32:02,225 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 00:32:32] 2025-11-23 23:32:02,336 | INFO     | [payload] validate_post thread has finished
[2025-11-24 00:32:32] 2025-11-23 23:32:02,951 | INFO     | [data] copytool_out thread has finished
[2025-11-24 00:32:32] 2025-11-23 23:32:03,837 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 00:32:32] 2025-11-23 23:32:11,165 | INFO     | [monitor] cgroup control has ended
[2025-11-24 00:32:32] 2025-11-23 23:32:12,460 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140585027557184)>', '<ExcThread(monitor, started 140584589182720)>']
[2025-11-24 00:32:32] 2025-11-23 23:32:17,486 | INFO     | all workflow threads have been joined
[2025-11-24 00:32:32] 2025-11-23 23:32:17,486 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 00:32:32] 2025-11-23 23:32:17,487 | INFO     | traces error code: 0
[2025-11-24 00:32:32] 2025-11-23 23:32:17,487 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 00:32:32] 2025-11-23 23:32:29,740 | INFO     | PID=26307 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 00:32:32] 2025-11-23 23:32:29,741 | INFO     | .. there are 9 such processes running
[2025-11-24 00:32:32] 2025-11-23 23:32:29,741 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 00:32:32] 2025-11-23 23:32:29,741 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 00:32:32] 2025-11-23 23:32:29,741 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 00:32:32] 2025-11-23 23:32:29,741 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 00:32:32] 2025-11-23 23:32:29,741 | INFO     | [monitor] control thread has ended
[2025-11-24 00:32:32] 2025-11-23 23:32:30,151 [wrapper] ==== pilot stdout END ====
[2025-11-24 00:32:32] 2025-11-23 23:32:30,248 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 00:32:32] 2025-11-23 23:32:30,327 [wrapper] pilotpid: 26307
[2025-11-24 00:32:32] 2025-11-23 23:32:30,353 [wrapper] Pilot exit status: 0
[2025-11-24 00:32:32] 2025-11-23 23:32:30,568 [wrapper] pandaids: 6893845831
[2025-11-24 00:32:32] 2025-11-23 23:32:30,658 [wrapper] cleanup supervisor_pilot  7362 26308
[2025-11-24 00:32:32] 2025-11-23 23:32:30,672 [wrapper] Test setup, not cleaning
[2025-11-24 00:32:32] 2025-11-23 23:32:30,682 [wrapper] apfmon messages muted
[2025-11-24 00:32:32] 2025-11-23 23:32:30,750 [wrapper] ==== wrapper stdout END ====
[2025-11-24 00:32:32] 2025-11-23 23:32:30,836 [wrapper] ==== wrapper stderr END ====
[2025-11-24 00:32:32]  *** Error codes and diagnostics ***
[2025-11-24 00:32:32]     "exeErrorCode": 0,
[2025-11-24 00:32:32]     "exeErrorDiag": "",
[2025-11-24 00:32:32]     "pilotErrorCode": 0,
[2025-11-24 00:32:32]     "pilotErrorDiag": "",
[2025-11-24 00:32:32]  *** Listing of results directory ***
[2025-11-24 00:32:32] total 1328004
[2025-11-24 00:32:32] -rw-r--r--. 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-24 00:32:32] -rwx------. 1 boinc boinc     36292 Nov 20 11:21 runpilot2-wrapper.sh
[2025-11-24 00:32:32] -rw-r--r--. 1 boinc boinc      5112 Nov 20 11:23 queuedata.json
[2025-11-24 00:32:32] -rw-r--r--. 1 boinc boinc       100 Nov 22 23:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 00:32:32] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 23:28 run_atlas
[2025-11-24 00:32:32] -rw-r--r--. 1 boinc boinc       105 Nov 22 23:28 job.xml
[2025-11-24 00:32:32] -rw-r--r--. 2 boinc boinc 409922704 Nov 22 23:28 EVNT.47493127._000215.pool.root.1
[2025-11-24 00:32:32] -rw-r--r--. 1 boinc boinc      6392 Nov 22 23:28 init_data.xml
[2025-11-24 00:32:32] -rw-r--r--. 2 boinc boinc     15847 Nov 22 23:28 start_atlas.sh
[2025-11-24 00:32:32] drwxrwx--x. 2 boinc boinc        68 Nov 22 23:28 shared
[2025-11-24 00:32:32] -rw-r--r--. 2 boinc boinc    590100 Nov 22 23:28 input.tar.gz
[2025-11-24 00:32:32] -rw-r--r--. 1 boinc boinc         0 Nov 22 23:28 boinc_lockfile
[2025-11-24 00:32:32] -rw-r--r--. 1 boinc boinc      2786 Nov 22 23:28 pandaJob.out
[2025-11-24 00:32:32] -rw-------. 1 boinc boinc    989784 Nov 22 23:32 agis_schedconf.cvmfs.json
[2025-11-24 00:32:32] drwx------. 5 boinc boinc      4096 Nov 22 23:32 pilot3
[2025-11-24 00:32:32] -rw-r--r--. 1 boinc boinc       533 Nov 24 00:17 boinc_task_state.xml
[2025-11-24 00:32:32] -rw-------. 1 boinc boinc 917151930 Nov 24 00:30 HITS.47523449._002142.pool.root.1
[2025-11-24 00:32:32] -rw-------. 1 boinc boinc      1031 Nov 24 00:31 memory_monitor_summary.json
[2025-11-24 00:32:32] -rw-------. 1 boinc boinc   1526164 Nov 24 00:31 agis_ddmendpoints.agis.ALL.json
[2025-11-24 00:32:32] -rw-------. 1 boinc boinc   2537480 Nov 24 00:31 log.47523449._002142.job.log.tgz.1
[2025-11-24 00:32:32] -rw-------. 1 boinc boinc        95 Nov 24 00:31 pilot_heartbeat.json
[2025-11-24 00:32:32] -rw-------. 1 boinc boinc      8629 Nov 24 00:31 heartbeat.json
[2025-11-24 00:32:32] -rw-r--r--. 1 boinc boinc      8192 Nov 24 00:32 boinc_mmap_file
[2025-11-24 00:32:32] -rw-r--r--. 1 boinc boinc        29 Nov 24 00:32 wrapper_checkpoint.txt
[2025-11-24 00:32:32] -rw-------. 1 boinc boinc       820 Nov 24 00:32 pilotlog.txt
[2025-11-24 00:32:32] -rw-------. 1 boinc boinc  11909401 Nov 24 00:32 log.47523449._002142.job.log.1
[2025-11-24 00:32:32] -rw-------. 1 boinc boinc       353 Nov 24 00:32 output.list
[2025-11-24 00:32:32] -rw-r--r--. 1 boinc boinc       620 Nov 24 00:32 runtime_log
[2025-11-24 00:32:32] -rw-------. 1 boinc boinc  14469120 Nov 24 00:32 result.tar.gz
[2025-11-24 00:32:32] -rw-------. 1 boinc boinc       662 Nov 24 00:32 sMHNDmhyGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmAPHKDmoNX8Jm.diag
[2025-11-24 00:32:32] -rw-r--r--. 1 boinc boinc      8817 Nov 24 00:32 runtime_log.err
[2025-11-24 00:32:32] -rw-r--r--. 1 boinc boinc     21055 Nov 24 00:32 stderr.txt
[2025-11-24 00:32:32] HITS file was successfully produced:
[2025-11-24 00:32:32] -rw-------. 1 boinc boinc 917151930 Nov 24 00:30 shared/HITS.pool.root.1
[2025-11-24 00:32:32]  *** Contents of shared directory: ***
[2025-11-24 00:32:32] total 1310704
[2025-11-24 00:32:32] -rw-r--r--. 2 boinc boinc 409922704 Nov 22 23:28 ATLAS.root_0
[2025-11-24 00:32:32] -rw-r--r--. 2 boinc boinc     15847 Nov 22 23:28 start_atlas.sh
[2025-11-24 00:32:32] -rw-r--r--. 2 boinc boinc    590100 Nov 22 23:28 input.tar.gz
[2025-11-24 00:32:32] -rw-------. 1 boinc boinc 917151930 Nov 24 00:30 HITS.pool.root.1
[2025-11-24 00:32:32] -rw-------. 1 boinc boinc  14469120 Nov 24 00:32 result.tar.gz
00:32:33 (22482): run_atlas exited; CPU time 335121.743792
00:32:33 (22482): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN