Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:16:35 (32551): wrapper (7.7.26015): starting
22:16:35 (32551): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 22:16:35] Arguments: --nthreads 8
[2025-11-22 22:16:35] Threads: 8
[2025-11-22 22:16:35] Checking for CVMFS
[2025-11-22 22:16:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 22:16:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 22:16:36] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 22:16:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 22:16:37] 2.11.2.0 3881 217354 141860 153185 0 253 22086073 25165824 4194 130560 2 115214059 99.920 39880030 2873 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-22 22:16:37] CVMFS is ok
[2025-11-22 22:16:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 22:16:37] Checking for apptainer binary...
[2025-11-22 22:16:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 22:16:37] Running /usr/bin/apptainer --version
[2025-11-22 22:16:38] apptainer version 1.3.2-1.el7
[2025-11-22 22:16:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 22:16:40] cg-vwn428.simple-grid.lan
[2025-11-22 22:16:40] apptainer works
[2025-11-22 22:16:40] Set ATHENA_PROC_NUMBER=8
[2025-11-22 22:16:40] Set ATHENA_CORE_NUMBER=8
[2025-11-22 22:16:40] Starting ATLAS job with PandaID=6893840298
[2025-11-22 22:16:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 23:40:21]  *** The last 200 lines of the pilot log: ***
[2025-11-23 23:40:21] 2025-11-23 22:39:33,650 | INFO     | time since job start (91222s) is within the limit (172800.0s)
[2025-11-23 23:40:21] 2025-11-23 22:39:35,175 | INFO     | monitor loop #6094: job 0:6893840298 is in state 'finished'
[2025-11-23 23:40:21] 2025-11-23 22:39:35,175 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 23:40:21] 2025-11-23 22:39:35,657 | INFO     | time since job start (91224s) is within the limit (172800.0s)
[2025-11-23 23:40:21] 2025-11-23 22:39:37,663 | INFO     | time since job start (91226s) is within the limit (172800.0s)
[2025-11-23 23:40:21] 2025-11-23 22:39:37,682 | INFO     | monitor loop #6095: job 0:6893840298 is in state 'finished'
[2025-11-23 23:40:21] 2025-11-23 22:39:37,682 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 23:40:21] 2025-11-23 22:39:39,670 | INFO     | time since job start (91228s) is within the limit (172800.0s)
[2025-11-23 23:40:21] 2025-11-23 22:39:40,187 | INFO     | monitor loop #6096: job 0:6893840298 is in state 'finished'
[2025-11-23 23:40:21] 2025-11-23 22:39:40,187 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 23:40:21] 2025-11-23 22:39:41,677 | INFO     | time since job start (91230s) is within the limit (172800.0s)
[2025-11-23 23:40:21] 2025-11-23 22:39:42,697 | INFO     | monitor loop #6097: job 0:6893840298 is in state 'finished'
[2025-11-23 23:40:21] 2025-11-23 22:39:42,697 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 23:40:21] 2025-11-23 22:39:43,684 | INFO     | time since job start (91232s) is within the limit (172800.0s)
[2025-11-23 23:40:21] 2025-11-23 22:39:44,428 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 23:40:21] 2025-11-23 22:39:44,429 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-23 23:40:21] 2025-11-23 22:39:44,431 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6893840298/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 23:40:21] 2025-11-23 22:39:44,432 | INFO     | extracted standard info from prmon json
[2025-11-23 23:40:21] 2025-11-23 22:39:44,433 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 23:40:21] 2025-11-23 22:39:44,433 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 23:40:21] 2025-11-23 22:39:44,478 | INFO     | fitting pss+swap vs Time
[2025-11-23 23:40:21] 2025-11-23 22:39:44,481 | INFO     | sum of square deviations: 1027804444727.6749
[2025-11-23 23:40:21] 2025-11-23 22:39:44,577 | INFO     | sum of deviations: 2724204014496.873
[2025-11-23 23:40:21] 2025-11-23 22:39:44,578 | INFO     | mean x: 1763891995.4138162
[2025-11-23 23:40:21] 2025-11-23 22:39:44,578 | INFO     | mean y: 2859165.6177062374
[2025-11-23 23:40:21] 2025-11-23 22:39:44,578 | INFO     | intersect: -4672350870.391036
[2025-11-23 23:40:21] 2025-11-23 22:39:44,580 | INFO     | chi2: 14.201253361126337
[2025-11-23 23:40:21] 2025-11-23 22:39:44,583 | INFO     | sum of square deviations: 1017499620015.1493
[2025-11-23 23:40:21] 2025-11-23 22:39:44,649 | INFO     | sum of deviations: 3208141813665.5254
[2025-11-23 23:40:21] 2025-11-23 22:39:44,650 | INFO     | mean x: 1763891842.9185734
[2025-11-23 23:40:21] 2025-11-23 22:39:44,650 | INFO     | mean y: 2866326.020861373
[2025-11-23 23:40:21] 2025-11-23 22:39:44,650 | INFO     | intersect: -5558624867.426823
[2025-11-23 23:40:21] 2025-11-23 22:39:44,652 | INFO     | chi2: 11.12839294696401
[2025-11-23 23:40:21] 2025-11-23 22:39:44,652 | INFO     | current chi2=11.12839294696401 (change=21.637952200569792 %)
[2025-11-23 23:40:21] 2025-11-23 22:39:44,652 | INFO     | right removable region: 1485
[2025-11-23 23:40:21] 2025-11-23 22:39:44,655 | INFO     | sum of square deviations: 1017498334135.1487
[2025-11-23 23:40:21] 2025-11-23 22:39:44,720 | INFO     | sum of deviations: 2254177829144.161
[2025-11-23 23:40:21] 2025-11-23 22:39:44,721 | INFO     | mean x: 1763892147.9185734
[2025-11-23 23:40:21] 2025-11-23 22:39:44,721 | INFO     | mean y: 2866117.4145356664
[2025-11-23 23:40:21] 2025-11-23 22:39:44,721 | INFO     | intersect: -3904881383.9306555
[2025-11-23 23:40:21] 2025-11-23 22:39:44,723 | INFO     | chi2: 11.54641399873948
[2025-11-23 23:40:21] 2025-11-23 22:39:44,723 | INFO     | current chi2=11.54641399873948 (change=18.694401788887564 %)
[2025-11-23 23:40:21] 2025-11-23 22:39:44,723 | INFO     | left removable region: 10
[2025-11-23 23:40:21] 2025-11-23 22:39:44,725 | INFO     | sum of square deviations: 995070212832.0156
[2025-11-23 23:40:21] 2025-11-23 22:39:44,790 | INFO     | sum of deviations: 2740300777740.376
[2025-11-23 23:40:21] 2025-11-23 22:39:44,790 | INFO     | mean x: 1763892117.4230509
[2025-11-23 23:40:21] 2025-11-23 22:39:44,790 | INFO     | mean y: 2876514.906440678
[2025-11-23 23:40:21] 2025-11-23 22:39:44,790 | INFO     | intersect: -4854665072.503629
[2025-11-23 23:40:21] 2025-11-23 22:39:44,792 | INFO     | chi2: 7.657491226070126
[2025-11-23 23:40:21] 2025-11-23 22:39:44,793 | INFO     | current memory leak: 2.75 B/s (using 1475 data points, chi2=7.66)
[2025-11-23 23:40:21] 2025-11-23 22:39:44,795 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-23 23:40:21] 2025-11-23 22:39:44,795 | INFO     | ..............................
[2025-11-23 23:40:21] 2025-11-23 22:39:44,795 | INFO     | . Timing measurements:
[2025-11-23 23:40:21] 2025-11-23 22:39:44,795 | INFO     | . get job = 0 s
[2025-11-23 23:40:21] 2025-11-23 22:39:44,796 | INFO     | . initial setup = 4 s
[2025-11-23 23:40:21] 2025-11-23 22:39:44,796 | INFO     | . payload setup = 17 s
[2025-11-23 23:40:21] 2025-11-23 22:39:44,796 | INFO     | . stage-in = 0 s
[2025-11-23 23:40:21] 2025-11-23 22:39:44,796 | INFO     | . payload execution = 90944 s
[2025-11-23 23:40:21] 2025-11-23 22:39:44,796 | INFO     | . stage-out = 4 s
[2025-11-23 23:40:21] 2025-11-23 22:39:44,796 | INFO     | . log creation = 1 s
[2025-11-23 23:40:21] 2025-11-23 22:39:44,796 | INFO     | ..............................
[2025-11-23 23:40:21] 2025-11-23 22:39:44,943 | INFO     | 
[2025-11-23 23:40:21] 2025-11-23 22:39:44,943 | INFO     | job summary report
[2025-11-23 23:40:21] 2025-11-23 22:39:44,943 | INFO     | --------------------------------------------------
[2025-11-23 23:40:21] 2025-11-23 22:39:44,943 | INFO     | PanDA job id: 6893840298
[2025-11-23 23:40:21] 2025-11-23 22:39:44,944 | INFO     | task id: 47523449
[2025-11-23 23:40:21] 2025-11-23 22:39:44,944 | INFO     | errors: (none)
[2025-11-23 23:40:21] 2025-11-23 22:39:44,944 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 23:40:21] 2025-11-23 22:39:44,944 | INFO     | pilot state: finished 
[2025-11-23 23:40:21] 2025-11-23 22:39:44,944 | INFO     | transexitcode: 0
[2025-11-23 23:40:21] 2025-11-23 22:39:44,944 | INFO     | exeerrorcode: 0
[2025-11-23 23:40:21] 2025-11-23 22:39:44,944 | INFO     | exeerrordiag: 
[2025-11-23 23:40:21] 2025-11-23 22:39:44,944 | INFO     | exitcode: 0
[2025-11-23 23:40:21] 2025-11-23 22:39:44,944 | INFO     | exitmsg: OK
[2025-11-23 23:40:21] 2025-11-23 22:39:44,944 | INFO     | cpuconsumptiontime: 330828 s
[2025-11-23 23:40:21] 2025-11-23 22:39:44,944 | INFO     | nevents: 1000
[2025-11-23 23:40:21] 2025-11-23 22:39:44,945 | INFO     | neventsw: 0
[2025-11-23 23:40:21] 2025-11-23 22:39:44,945 | INFO     | pid: 10606
[2025-11-23 23:40:21] 2025-11-23 22:39:44,945 | INFO     | pgrp: 10606
[2025-11-23 23:40:21] 2025-11-23 22:39:44,945 | INFO     | corecount: 8
[2025-11-23 23:40:21] 2025-11-23 22:39:44,945 | INFO     | event service: False
[2025-11-23 23:40:21] 2025-11-23 22:39:44,945 | INFO     | sizes: {0: 2298636, 1: 2298835, 12: 2298835, 23: 2298863, 34: 2298891, 44: 2298919, 55: 2299075, 66: 2299103, 77: 2299131, 88: 2299187, 96: 2299477, 98: 2299785, 9
[2025-11-23 23:40:21] 2025-11-23 22:39:44,945 | INFO     | --------------------------------------------------
[2025-11-23 23:40:21] 2025-11-23 22:39:44,945 | INFO     | 
[2025-11-23 23:40:21] 2025-11-23 22:39:44,945 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-23 23:40:21] 2025-11-23 22:39:45,648 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 23:40:21] 2025-11-23 22:39:45,648 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 23:40:21] 2025-11-23 22:39:45,648 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 23:40:21] 2025-11-23 22:39:45,649 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 23:40:21] 2025-11-23 22:39:45,649 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 23:40:21] 2025-11-23 22:39:45,649 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 23:40:21] 2025-11-23 22:39:45,649 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 23:40:21] 2025-11-23 22:39:45,649 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 23:40:21] 2025-11-23 22:39:45,649 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 23:40:21] 2025-11-23 22:39:45,649 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 23:40:21] 2025-11-23 22:39:45,649 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 23:40:21] 2025-11-23 22:39:45,649 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 23:40:21] 2025-11-23 22:39:45,649 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 23:40:21] 2025-11-23 22:39:45,649 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 23:40:21] 2025-11-23 22:39:45,649 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 23:40:21] 2025-11-23 22:39:45,650 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 23:40:21] 2025-11-23 22:39:45,650 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 23:40:21] 2025-11-23 22:39:45,650 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 23:40:21] 2025-11-23 22:39:45,650 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 23:40:21] 2025-11-23 22:39:45,650 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 23:40:21] 2025-11-23 22:39:45,650 | INFO     | job 6893840298 has completed (purged errors)
[2025-11-23 23:40:21] 2025-11-23 22:39:45,650 | INFO     | overall cleanup function is called
[2025-11-23 23:40:21] 2025-11-23 22:39:46,678 | INFO     | --- collectZombieJob: --- 10, [10606]
[2025-11-23 23:40:21] 2025-11-23 22:39:46,678 | INFO     | zombie collector waiting for pid 10606
[2025-11-23 23:40:21] 2025-11-23 22:39:46,678 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 23:40:21] 2025-11-23 22:39:46,678 | INFO     | collected zombie processes
[2025-11-23 23:40:21] 2025-11-23 22:39:46,679 | INFO     | will attempt to kill all subprocesses of pid=10606
[2025-11-23 23:40:21] 2025-11-23 22:39:46,777 | INFO     | process IDs to be killed: [10606] (in reverse order)
[2025-11-23 23:40:21] 2025-11-23 22:39:46,890 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 23:40:21] 2025-11-23 22:39:46,890 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 23:40:21] 2025-11-23 22:39:46,894 | INFO     | did not find any defunct processes belonging to 10606
[2025-11-23 23:40:21] 2025-11-23 22:39:46,897 | INFO     | did not find any defunct processes belonging to 10606
[2025-11-23 23:40:21] 2025-11-23 22:39:46,899 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 23:40:21] 2025-11-23 22:39:46,899 | INFO     | ready for new job
[2025-11-23 23:40:21] 2025-11-23 22:39:46,900 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 23:40:21] 2025-11-23 22:39:46,906 | INFO     | ***************************************
[2025-11-23 23:40:21] 2025-11-23 22:39:46,907 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 23:40:21] 2025-11-23 22:39:46,907 | INFO     | ***************************************
[2025-11-23 23:40:21] 2025-11-23 22:39:46,907 | INFO     | 
[2025-11-23 23:40:21] 2025-11-23 22:39:46,908 | INFO     | pilot is running in a VM
[2025-11-23 23:40:21] 2025-11-23 22:39:46,908 | INFO     | architecture information:
[2025-11-23 23:40:21] 2025-11-23 22:39:46,908 | INFO     | executing command: cat /etc/os-release
[2025-11-23 23:40:21] 2025-11-23 22:39:46,958 | INFO     | cat /etc/os-release:
[2025-11-23 23:40:21] NAME="CentOS Linux"
[2025-11-23 23:40:21] VERSION="7 (Core)"
[2025-11-23 23:40:21] ID="centos"
[2025-11-23 23:40:21] ID_LIKE="rhel fedora"
[2025-11-23 23:40:21] VERSION_ID="7"
[2025-11-23 23:40:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 23:40:21] ANSI_COLOR="0;31"
[2025-11-23 23:40:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 23:40:21] HOME_URL="https://www.centos.org/"
[2025-11-23 23:40:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 23:40:21] 
[2025-11-23 23:40:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 23:40:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 23:40:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 23:40:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 23:40:21] 
[2025-11-23 23:40:21] 2025-11-23 22:39:46,958 | INFO     | ***************************************
[2025-11-23 23:40:21] 2025-11-23 22:39:47,461 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-23 23:40:21] 2025-11-23 22:39:47,699 | INFO     | sufficient remaining disk space (494997078016 B)
[2025-11-23 23:40:21] 2025-11-23 22:39:47,699 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 23:40:21] 2025-11-23 22:39:47,699 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 23:40:21] 2025-11-23 22:39:47,700 | INFO     | update_server=False
[2025-11-23 23:40:21] 2025-11-23 22:39:47,700 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 23:40:21] 2025-11-23 22:39:47,709 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 23:40:21] 2025-11-23 22:39:47,709 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 23:40:21] 2025-11-23 22:39:47,709 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 23:40:21] 2025-11-23 22:39:47,710 | INFO     | will abort loop
[2025-11-23 23:40:21] 2025-11-23 22:39:47,879 | INFO     | all data control threads have been joined
[2025-11-23 23:40:21] 2025-11-23 22:39:48,017 | INFO     | all job control threads have been joined
[2025-11-23 23:40:21] 2025-11-23 22:39:48,581 | INFO     | all payload control threads have been joined
[2025-11-23 23:40:21] 2025-11-23 22:39:48,609 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 23:40:21] 2025-11-23 22:39:48,705 | INFO     | [job] retrieve thread has finished
[2025-11-23 23:40:21] 2025-11-23 22:39:48,716 | INFO     | [job] job monitor thread has finished
[2025-11-23 23:40:21] 2025-11-23 22:39:48,767 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 23:40:21] 2025-11-23 22:39:48,810 | INFO     | [data] copytool_in thread has finished
[2025-11-23 23:40:21] 2025-11-23 22:39:48,885 | INFO     | [data] control thread has finished
[2025-11-23 23:40:21] 2025-11-23 22:39:49,023 | INFO     | [job] control thread has finished
[2025-11-23 23:40:21] 2025-11-23 22:39:49,102 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 23:40:21] 2025-11-23 22:39:49,113 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 23:40:21] 2025-11-23 22:39:49,168 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 23:40:21] 2025-11-23 22:39:49,228 | INFO     | [job] validate thread has finished
[2025-11-23 23:40:21] 2025-11-23 22:39:49,548 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 23:40:21] 2025-11-23 22:39:49,586 | INFO     | [payload] control thread has finished
[2025-11-23 23:40:21] 2025-11-23 22:39:49,654 | INFO     | [payload] validate_post thread has finished
[2025-11-23 23:40:21] 2025-11-23 22:39:49,734 | INFO     | [payload] failed_post thread has finished
[2025-11-23 23:40:21] 2025-11-23 22:39:49,955 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 23:40:21] 2025-11-23 22:39:50,616 | INFO     | [data] copytool_out thread has finished
[2025-11-23 23:40:21] 2025-11-23 22:39:50,733 | INFO     | [monitor] cgroup control has ended
[2025-11-23 23:40:21] 2025-11-23 22:39:50,960 | INFO     | [job] queue monitor thread has finished
[2025-11-23 23:40:21] 2025-11-23 22:39:53,177 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 23:40:21] 2025-11-23 22:39:54,962 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140045107488576)>', '<ExcThread(monitor, started 140044589332224)>']
[2025-11-23 23:40:21] 2025-11-23 22:39:59,988 | INFO     | all workflow threads have been joined
[2025-11-23 23:40:21] 2025-11-23 22:39:59,988 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 23:40:21] 2025-11-23 22:39:59,989 | INFO     | traces error code: 0
[2025-11-23 23:40:21] 2025-11-23 22:39:59,989 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 23:40:21] 2025-11-23 22:40:16,943 | INFO     | PID=3949 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-23 23:40:21] 2025-11-23 22:40:16,944 | INFO     | .. there are 9 such processes running
[2025-11-23 23:40:21] 2025-11-23 22:40:16,944 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 23:40:21] 2025-11-23 22:40:16,944 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 23:40:21] 2025-11-23 22:40:16,944 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 23:40:21] 2025-11-23 22:40:16,944 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 23:40:21] 2025-11-23 22:40:16,945 | INFO     | [monitor] control thread has ended
[2025-11-23 23:40:21] 2025-11-23 22:40:17,358 [wrapper] ==== pilot stdout END ====
[2025-11-23 23:40:21] 2025-11-23 22:40:17,450 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 23:40:21] 2025-11-23 22:40:17,541 [wrapper] pilotpid: 3949
[2025-11-23 23:40:21] 2025-11-23 22:40:17,592 [wrapper] Pilot exit status: 0
[2025-11-23 23:40:21] 2025-11-23 22:40:17,981 [wrapper] pandaids: 6893840298
[2025-11-23 23:40:21] 2025-11-23 22:40:18,430 [wrapper] cleanup supervisor_pilot 30502 3950
[2025-11-23 23:40:21] 2025-11-23 22:40:18,584 [wrapper] Test setup, not cleaning
[2025-11-23 23:40:21] 2025-11-23 22:40:18,679 [wrapper] apfmon messages muted
[2025-11-23 23:40:21] 2025-11-23 22:40:18,794 [wrapper] ==== wrapper stdout END ====
[2025-11-23 23:40:21] 2025-11-23 22:40:18,912 [wrapper] ==== wrapper stderr END ====
[2025-11-23 23:40:21]  *** Error codes and diagnostics ***
[2025-11-23 23:40:21]     "exeErrorCode": 0,
[2025-11-23 23:40:21]     "exeErrorDiag": "",
[2025-11-23 23:40:21]     "pilotErrorCode": 0,
[2025-11-23 23:40:21]     "pilotErrorDiag": "",
[2025-11-23 23:40:21]  *** Listing of results directory ***
[2025-11-23 23:40:21] total 1305324
[2025-11-23 23:40:21] -rw-r--r--. 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-23 23:40:21] -rwx------. 1 boinc boinc     36292 Nov 20 11:20 runpilot2-wrapper.sh
[2025-11-23 23:40:21] -rw-r--r--. 1 boinc boinc      5112 Nov 20 11:21 queuedata.json
[2025-11-23 23:40:21] -rw-r--r--. 1 boinc boinc       100 Nov 22 22:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 23:40:21] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 22:16 run_atlas
[2025-11-23 23:40:21] -rw-r--r--. 1 boinc boinc       105 Nov 22 22:16 job.xml
[2025-11-23 23:40:21] -rw-r--r--. 2 boinc boinc 410575391 Nov 22 22:16 EVNT.47493127._000175.pool.root.1
[2025-11-23 23:40:21] -rw-r--r--. 1 boinc boinc      6392 Nov 22 22:16 init_data.xml
[2025-11-23 23:40:21] -rw-r--r--. 2 boinc boinc     15847 Nov 22 22:16 start_atlas.sh
[2025-11-23 23:40:21] drwxrwx--x. 2 boinc boinc        68 Nov 22 22:16 shared
[2025-11-23 23:40:21] -rw-r--r--. 2 boinc boinc    590103 Nov 22 22:16 input.tar.gz
[2025-11-23 23:40:21] -rw-r--r--. 1 boinc boinc         0 Nov 22 22:16 boinc_lockfile
[2025-11-23 23:40:21] -rw-r--r--. 1 boinc boinc      2786 Nov 22 22:16 pandaJob.out
[2025-11-23 23:40:21] -rw-------. 1 boinc boinc    989768 Nov 22 22:19 agis_schedconf.cvmfs.json
[2025-11-23 23:40:21] drwx------. 5 boinc boinc      4096 Nov 22 22:19 pilot3
[2025-11-23 23:40:21] -rw-r--r--. 1 boinc boinc       533 Nov 23 23:18 boinc_task_state.xml
[2025-11-23 23:40:21] -rw-------. 1 boinc boinc 892846294 Nov 23 23:36 HITS.47523449._001744.pool.root.1
[2025-11-23 23:40:21] -rw-------. 1 boinc boinc      1031 Nov 23 23:37 memory_monitor_summary.json
[2025-11-23 23:40:21] -rw-------. 1 boinc boinc   1526164 Nov 23 23:37 agis_ddmendpoints.agis.ALL.json
[2025-11-23 23:40:21] -rw-------. 1 boinc boinc   2547413 Nov 23 23:38 log.47523449._001744.job.log.tgz.1
[2025-11-23 23:40:21] -rw-------. 1 boinc boinc        95 Nov 23 23:39 pilot_heartbeat.json
[2025-11-23 23:40:21] -rw-------. 1 boinc boinc      7941 Nov 23 23:39 heartbeat.json
[2025-11-23 23:40:21] -rw-r--r--. 1 boinc boinc        29 Nov 23 23:40 wrapper_checkpoint.txt
[2025-11-23 23:40:21] -rw-r--r--. 1 boinc boinc      8192 Nov 23 23:40 boinc_mmap_file
[2025-11-23 23:40:21] -rw-------. 1 boinc boinc       819 Nov 23 23:40 pilotlog.txt
[2025-11-23 23:40:21] -rw-------. 1 boinc boinc  12114417 Nov 23 23:40 log.47523449._001744.job.log.1
[2025-11-23 23:40:21] -rw-------. 1 boinc boinc       353 Nov 23 23:40 output.list
[2025-11-23 23:40:21] -rw-r--r--. 1 boinc boinc       620 Nov 23 23:40 runtime_log
[2025-11-23 23:40:21] -rw-------. 1 boinc boinc  14684160 Nov 23 23:40 result.tar.gz
[2025-11-23 23:40:21] -rw-r--r--. 1 boinc boinc      8817 Nov 23 23:40 runtime_log.err
[2025-11-23 23:40:21] -rw-------. 1 boinc boinc       662 Nov 23 23:40 qwbLDmswGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmONHKDmBP7Ksm.diag
[2025-11-23 23:40:21] -rw-r--r--. 1 boinc boinc     21411 Nov 23 23:40 stderr.txt
[2025-11-23 23:40:21] HITS file was successfully produced:
[2025-11-23 23:40:21] -rw-------. 1 boinc boinc 892846294 Nov 23 23:36 shared/HITS.pool.root.1
[2025-11-23 23:40:21]  *** Contents of shared directory: ***
[2025-11-23 23:40:21] total 1287816
[2025-11-23 23:40:21] -rw-r--r--. 2 boinc boinc 410575391 Nov 22 22:16 ATLAS.root_0
[2025-11-23 23:40:21] -rw-r--r--. 2 boinc boinc     15847 Nov 22 22:16 start_atlas.sh
[2025-11-23 23:40:21] -rw-r--r--. 2 boinc boinc    590103 Nov 22 22:16 input.tar.gz
[2025-11-23 23:40:21] -rw-------. 1 boinc boinc 892846294 Nov 23 23:36 HITS.pool.root.1
[2025-11-23 23:40:21] -rw-------. 1 boinc boinc  14684160 Nov 23 23:40 result.tar.gz
23:40:23 (32551): run_atlas exited; CPU time 331348.161721
23:40:23 (32551): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN