Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:03:35 (1214752): wrapper (7.7.26015): starting
20:03:35 (1214752): wrapper: running run_atlas (--nthreads 2)
[2025-11-24 20:03:35] Arguments: --nthreads 2
[2025-11-24 20:03:35] Threads: 2
[2025-11-24 20:03:35] Checking for CVMFS
[2025-11-24 20:03:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 20:03:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 20:03:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 20:03:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 20:03:35] 2.9.2.0 187177 8716 60896 153255 2 81 31263801 36864001 0 130560 0 2804795 99.909 468201 6665 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 20:03:35] CVMFS is ok
[2025-11-24 20:03:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 20:03:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 20:03:35] Further information can be found at the LHC@home message board.
[2025-11-24 20:03:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 20:03:35] Checking for apptainer binary...
[2025-11-24 20:03:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 20:03:35] Running /usr/bin/apptainer --version
[2025-11-24 20:03:35] apptainer version 1.4.1-1.1
[2025-11-24 20:03:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 20:03:36] thA366
[2025-11-24 20:03:36] apptainer works
[2025-11-24 20:03:36] Set ATHENA_PROC_NUMBER=2
[2025-11-24 20:03:36] Set ATHENA_CORE_NUMBER=2
[2025-11-24 20:03:36] Starting ATLAS job with PandaID=6893840240
[2025-11-24 20:03:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 08:09:11]  *** The last 200 lines of the pilot log: ***
[2025-11-25 08:09:11] 2025-11-25 07:08:38,895 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 08:09:11] 2025-11-25 07:08:39,347 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 08:09:11] 2025-11-25 07:08:39,348 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 3266.5724999999998
[2025-11-25 08:09:11] 2025-11-25 07:08:39,349 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6893840240/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 08:09:11] 2025-11-25 07:08:39,349 | INFO     | extracted standard info from prmon json
[2025-11-25 08:09:11] 2025-11-25 07:08:39,349 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 08:09:11] 2025-11-25 07:08:39,349 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 08:09:11] 2025-11-25 07:08:39,353 | INFO     | fitting pss+swap vs Time
[2025-11-25 08:09:11] 2025-11-25 07:08:39,354 | INFO     | sum of square deviations: 112394784572.0
[2025-11-25 08:09:11] 2025-11-25 07:08:39,358 | INFO     | sum of deviations: 265128983214.0014
[2025-11-25 08:09:11] 2025-11-25 07:08:39,358 | INFO     | mean x: 1764032773.0
[2025-11-25 08:09:11] 2025-11-25 07:08:39,358 | INFO     | mean y: 2021508.8737727911
[2025-11-25 08:09:11] 2025-11-25 07:08:39,358 | INFO     | intersect: -4159169931.12636
[2025-11-25 08:09:11] 2025-11-25 07:08:39,358 | INFO     | chi2: 3.9951152015574243
[2025-11-25 08:09:11] 2025-11-25 07:08:39,359 | INFO     | sum of square deviations: 110046777757.0
[2025-11-25 08:09:11] 2025-11-25 07:08:39,362 | INFO     | sum of deviations: 360703247816.99994
[2025-11-25 08:09:11] 2025-11-25 07:08:39,363 | INFO     | mean x: 1764032620.5
[2025-11-25 08:09:11] 2025-11-25 07:08:39,363 | INFO     | mean y: 2027695.9745762711
[2025-11-25 08:09:11] 2025-11-25 07:08:39,363 | INFO     | intersect: -5779988901.3174715
[2025-11-25 08:09:11] 2025-11-25 07:08:39,363 | INFO     | chi2: 2.2629225380425813
[2025-11-25 08:09:11] 2025-11-25 07:08:39,363 | INFO     | current chi2=2.2629225380425813 (change=43.35776507369747 %)
[2025-11-25 08:09:11] 2025-11-25 07:08:39,363 | INFO     | sum of square deviations: 107731701792.0
[2025-11-25 08:09:11] 2025-11-25 07:08:39,367 | INFO     | sum of deviations: 356197378140.99994
[2025-11-25 08:09:11] 2025-11-25 07:08:39,367 | INFO     | mean x: 1764032468.0
[2025-11-25 08:09:11] 2025-11-25 07:08:39,367 | INFO     | mean y: 2027399.1237553342
[2025-11-25 08:09:11] 2025-11-25 07:08:39,367 | INFO     | intersect: -5830459506.822969
[2025-11-25 08:09:11] 2025-11-25 07:08:39,368 | INFO     | chi2: 2.2626737475251644
[2025-11-25 08:09:11] 2025-11-25 07:08:39,368 | INFO     | current chi2=2.2626737475251644 (change=0.010994212715389216 %)
[2025-11-25 08:09:11] 2025-11-25 07:08:39,368 | INFO     | right removable region: 702
[2025-11-25 08:09:11] 2025-11-25 07:08:39,368 | INFO     | sum of square deviations: 110046777757.0
[2025-11-25 08:09:11] 2025-11-25 07:08:39,372 | INFO     | sum of deviations: 137236622944.0
[2025-11-25 08:09:11] 2025-11-25 07:08:39,372 | INFO     | mean x: 1764032925.5
[2025-11-25 08:09:11] 2025-11-25 07:08:39,372 | INFO     | mean y: 2029805.6214689265
[2025-11-25 08:09:11] 2025-11-25 07:08:39,372 | INFO     | intersect: -2197852157.230874
[2025-11-25 08:09:11] 2025-11-25 07:08:39,372 | INFO     | chi2: 2.1081852794098275
[2025-11-25 08:09:11] 2025-11-25 07:08:39,372 | INFO     | current chi2=2.1081852794098275 (change=47.23092644267206 %)
[2025-11-25 08:09:11] 2025-11-25 07:08:39,373 | INFO     | sum of square deviations: 107731701792.0
[2025-11-25 08:09:11] 2025-11-25 07:08:39,377 | INFO     | sum of deviations: 97687115258.99994
[2025-11-25 08:09:11] 2025-11-25 07:08:39,377 | INFO     | mean x: 1764033078.0
[2025-11-25 08:09:11] 2025-11-25 07:08:39,377 | INFO     | mean y: 2032402.5376955904
[2025-11-25 08:09:11] 2025-11-25 07:08:39,377 | INFO     | intersect: -1597527427.5296216
[2025-11-25 08:09:11] 2025-11-25 07:08:39,377 | INFO     | chi2: 1.841009916337374
[2025-11-25 08:09:11] 2025-11-25 07:08:39,377 | INFO     | current chi2=1.841009916337374 (change=12.673239192109687 %)
[2025-11-25 08:09:11] 2025-11-25 07:08:39,377 | INFO     | left removable region: 20
[2025-11-25 08:09:11] 2025-11-25 07:08:39,377 | INFO     | sum of square deviations: 98362739150.5
[2025-11-25 08:09:11] 2025-11-25 07:08:39,381 | INFO     | sum of deviations: 160177901579.00003
[2025-11-25 08:09:11] 2025-11-25 07:08:39,381 | INFO     | mean x: 1764033047.5
[2025-11-25 08:09:11] 2025-11-25 07:08:39,381 | INFO     | mean y: 2040492.982404692
[2025-11-25 08:09:11] 2025-11-25 07:08:39,381 | INFO     | intersect: -2870582964.8925195
[2025-11-25 08:09:11] 2025-11-25 07:08:39,381 | INFO     | chi2: 0.06793599019651508
[2025-11-25 08:09:11] 2025-11-25 07:08:39,381 | INFO     | current memory leak: 1.63 B/s (using 682 data points, chi2=0.07)
[2025-11-25 08:09:11] 2025-11-25 07:08:39,382 | INFO     | could have reported an average CPU frequency of 4491 MHz (27 samples)
[2025-11-25 08:09:11] 2025-11-25 07:08:39,382 | INFO     | ..............................
[2025-11-25 08:09:11] 2025-11-25 07:08:39,382 | INFO     | . Timing measurements:
[2025-11-25 08:09:11] 2025-11-25 07:08:39,382 | INFO     | . get job = 0 s
[2025-11-25 08:09:11] 2025-11-25 07:08:39,382 | INFO     | . initial setup = 1 s
[2025-11-25 08:09:11] 2025-11-25 07:08:39,382 | INFO     | . payload setup = 8 s
[2025-11-25 08:09:11] 2025-11-25 07:08:39,382 | INFO     | . stage-in = 0 s
[2025-11-25 08:09:11] 2025-11-25 07:08:39,382 | INFO     | . payload execution = 43450 s
[2025-11-25 08:09:11] 2025-11-25 07:08:39,382 | INFO     | . stage-out = 1 s
[2025-11-25 08:09:11] 2025-11-25 07:08:39,382 | INFO     | . log creation = 0 s
[2025-11-25 08:09:11] 2025-11-25 07:08:39,382 | INFO     | ..............................
[2025-11-25 08:09:11] 2025-11-25 07:08:39,410 | INFO     | 
[2025-11-25 08:09:11] 2025-11-25 07:08:39,410 | INFO     | job summary report
[2025-11-25 08:09:11] 2025-11-25 07:08:39,410 | INFO     | --------------------------------------------------
[2025-11-25 08:09:11] 2025-11-25 07:08:39,410 | INFO     | PanDA job id: 6893840240
[2025-11-25 08:09:11] 2025-11-25 07:08:39,410 | INFO     | task id: 47523449
[2025-11-25 08:09:11] 2025-11-25 07:08:39,410 | INFO     | errors: (none)
[2025-11-25 08:09:11] 2025-11-25 07:08:39,410 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 08:09:11] 2025-11-25 07:08:39,410 | INFO     | pilot state: finished 
[2025-11-25 08:09:11] 2025-11-25 07:08:39,410 | INFO     | transexitcode: 0
[2025-11-25 08:09:11] 2025-11-25 07:08:39,410 | INFO     | exeerrorcode: 0
[2025-11-25 08:09:11] 2025-11-25 07:08:39,410 | INFO     | exeerrordiag: 
[2025-11-25 08:09:11] 2025-11-25 07:08:39,411 | INFO     | exitcode: 0
[2025-11-25 08:09:11] 2025-11-25 07:08:39,411 | INFO     | exitmsg: OK
[2025-11-25 08:09:11] 2025-11-25 07:08:39,411 | INFO     | cpuconsumptiontime: 86103 s
[2025-11-25 08:09:11] 2025-11-25 07:08:39,411 | INFO     | nevents: 1000
[2025-11-25 08:09:11] 2025-11-25 07:08:39,411 | INFO     | neventsw: 0
[2025-11-25 08:09:11] 2025-11-25 07:08:39,411 | INFO     | pid: 1224895
[2025-11-25 08:09:11] 2025-11-25 07:08:39,411 | INFO     | pgrp: 1224895
[2025-11-25 08:09:11] 2025-11-25 07:08:39,411 | INFO     | corecount: 2
[2025-11-25 08:09:11] 2025-11-25 07:08:39,411 | INFO     | event service: False
[2025-11-25 08:09:11] 2025-11-25 07:08:39,411 | INFO     | sizes: {0: 2284086, 1: 2284341, 7: 2284603, 11: 2284631, 43462: 2330488, 43463: 2339488, 43464: 2339672, 43474: 2339918}
[2025-11-25 08:09:11] 2025-11-25 07:08:39,411 | INFO     | --------------------------------------------------
[2025-11-25 08:09:11] 2025-11-25 07:08:39,411 | INFO     | 
[2025-11-25 08:09:11] 2025-11-25 07:08:39,411 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-25 08:09:11] 2025-11-25 07:08:39,422 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 08:09:11] 2025-11-25 07:08:39,422 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 08:09:11] 2025-11-25 07:08:39,422 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 08:09:11] 2025-11-25 07:08:39,422 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 08:09:11] 2025-11-25 07:08:39,422 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 08:09:11] 2025-11-25 07:08:39,422 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 08:09:11] 2025-11-25 07:08:39,422 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 08:09:11] 2025-11-25 07:08:39,422 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 08:09:11] 2025-11-25 07:08:39,422 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 08:09:11] 2025-11-25 07:08:39,422 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 08:09:11] 2025-11-25 07:08:39,422 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 08:09:11] 2025-11-25 07:08:39,422 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 08:09:11] 2025-11-25 07:08:39,423 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 08:09:11] 2025-11-25 07:08:39,423 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 08:09:11] 2025-11-25 07:08:39,423 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 08:09:11] 2025-11-25 07:08:39,423 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 08:09:11] 2025-11-25 07:08:39,423 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 08:09:11] 2025-11-25 07:08:39,423 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 08:09:11] 2025-11-25 07:08:39,423 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 08:09:11] 2025-11-25 07:08:39,423 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 08:09:11] 2025-11-25 07:08:39,423 | INFO     | job 6893840240 has completed (purged errors)
[2025-11-25 08:09:11] 2025-11-25 07:08:39,423 | INFO     | overall cleanup function is called
[2025-11-25 08:09:11] 2025-11-25 07:08:40,430 | INFO     | --- collectZombieJob: --- 10, [1224895]
[2025-11-25 08:09:11] 2025-11-25 07:08:40,430 | INFO     | zombie collector waiting for pid 1224895
[2025-11-25 08:09:11] 2025-11-25 07:08:40,431 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 08:09:11] 2025-11-25 07:08:40,431 | INFO     | collected zombie processes
[2025-11-25 08:09:11] 2025-11-25 07:08:40,431 | INFO     | will attempt to kill all subprocesses of pid=1224895
[2025-11-25 08:09:11] 2025-11-25 07:08:40,464 | INFO     | process IDs to be killed: [1224895] (in reverse order)
[2025-11-25 08:09:11] 2025-11-25 07:08:40,484 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 08:09:11] 2025-11-25 07:08:40,484 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 08:09:11] 2025-11-25 07:08:40,485 | INFO     | did not find any defunct processes belonging to 1224895
[2025-11-25 08:09:11] 2025-11-25 07:08:40,486 | INFO     | did not find any defunct processes belonging to 1224895
[2025-11-25 08:09:11] 2025-11-25 07:08:40,486 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 08:09:11] 2025-11-25 07:08:40,486 | INFO     | ready for new job
[2025-11-25 08:09:11] 2025-11-25 07:08:40,486 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 08:09:11] 2025-11-25 07:08:40,488 | INFO     | ***************************************
[2025-11-25 08:09:11] 2025-11-25 07:08:40,488 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 08:09:11] 2025-11-25 07:08:40,488 | INFO     | ***************************************
[2025-11-25 08:09:11] 2025-11-25 07:08:40,488 | INFO     | 
[2025-11-25 08:09:11] 2025-11-25 07:08:40,488 | INFO     | architecture information:
[2025-11-25 08:09:11] 2025-11-25 07:08:40,488 | INFO     | executing command: cat /etc/os-release
[2025-11-25 08:09:11] 2025-11-25 07:08:40,496 | INFO     | cat /etc/os-release:
[2025-11-25 08:09:11] NAME="CentOS Linux"
[2025-11-25 08:09:11] VERSION="7 (Core)"
[2025-11-25 08:09:11] ID="centos"
[2025-11-25 08:09:11] ID_LIKE="rhel fedora"
[2025-11-25 08:09:11] VERSION_ID="7"
[2025-11-25 08:09:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 08:09:11] ANSI_COLOR="0;31"
[2025-11-25 08:09:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 08:09:11] HOME_URL="https://www.centos.org/"
[2025-11-25 08:09:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 08:09:11] 
[2025-11-25 08:09:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 08:09:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 08:09:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 08:09:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 08:09:11] 
[2025-11-25 08:09:11] 2025-11-25 07:08:40,496 | INFO     | ***************************************
[2025-11-25 08:09:11] 2025-11-25 07:08:41,000 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-25 08:09:11] 2025-11-25 07:08:41,012 | INFO     | sufficient remaining disk space (489019146240 B)
[2025-11-25 08:09:11] 2025-11-25 07:08:41,012 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 08:09:11] 2025-11-25 07:08:41,012 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 08:09:11] 2025-11-25 07:08:41,012 | INFO     | update_server=False
[2025-11-25 08:09:11] 2025-11-25 07:08:41,012 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 08:09:11] 2025-11-25 07:08:41,012 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 08:09:11] 2025-11-25 07:08:41,012 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 08:09:11] 2025-11-25 07:08:41,077 | INFO     | all payload control threads have been joined
[2025-11-25 08:09:11] 2025-11-25 07:08:41,335 | INFO     | all data control threads have been joined
[2025-11-25 08:09:11] 2025-11-25 07:08:41,400 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 08:09:11] 2025-11-25 07:08:41,400 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 08:09:11] 2025-11-25 07:08:41,402 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 08:09:11] 2025-11-25 07:08:41,402 | INFO     | will abort loop
[2025-11-25 08:09:11] 2025-11-25 07:08:41,407 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 08:09:11] 2025-11-25 07:08:42,017 | INFO     | [job] queue monitor thread has finished
[2025-11-25 08:09:11] 2025-11-25 07:08:42,018 | INFO     | [job] retrieve thread has finished
[2025-11-25 08:09:11] 2025-11-25 07:08:42,039 | INFO     | all job control threads have been joined
[2025-11-25 08:09:11] 2025-11-25 07:08:42,083 | INFO     | [payload] control thread has finished
[2025-11-25 08:09:11] 2025-11-25 07:08:42,239 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 08:09:11] 2025-11-25 07:08:42,340 | INFO     | [data] control thread has finished
[2025-11-25 08:09:11] 2025-11-25 07:08:42,408 | INFO     | [job] job monitor thread has finished
[2025-11-25 08:09:11] 2025-11-25 07:08:42,696 | INFO     | [data] copytool_in thread has finished
[2025-11-25 08:09:11] 2025-11-25 07:08:42,725 | INFO     | [payload] validate_post thread has finished
[2025-11-25 08:09:11] 2025-11-25 07:08:43,045 | INFO     | [job] control thread has finished
[2025-11-25 08:09:11] 2025-11-25 07:08:43,290 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 08:09:11] 2025-11-25 07:08:43,324 | INFO     | [payload] failed_post thread has finished
[2025-11-25 08:09:11] 2025-11-25 07:08:43,412 | INFO     | [data] copytool_out thread has finished
[2025-11-25 08:09:11] 2025-11-25 07:08:43,458 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 08:09:11] 2025-11-25 07:08:43,521 | INFO     | [job] validate thread has finished
[2025-11-25 08:09:11] 2025-11-25 07:08:45,016 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 08:09:11] 2025-11-25 07:08:48,460 | INFO     | [monitor] cgroup control has ended
[2025-11-25 08:09:11] 2025-11-25 07:08:51,833 | INFO     | job.realtimelogging is not enabled
[2025-11-25 08:09:11] 2025-11-25 07:08:52,839 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 08:09:11] 2025-11-25 07:08:54,145 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140045495240512)>', '<ExcThread(monitor, started 140045142955776)>']
[2025-11-25 08:09:11] 2025-11-25 07:08:59,171 | INFO     | all workflow threads have been joined
[2025-11-25 08:09:11] 2025-11-25 07:08:59,172 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 08:09:11] 2025-11-25 07:08:59,173 | INFO     | traces error code: 0
[2025-11-25 08:09:11] 2025-11-25 07:08:59,173 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 08:09:11] 2025-11-25 07:09:11,403 | INFO     | PID=1218462 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 08:09:11] 2025-11-25 07:09:11,404 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 08:09:11] 2025-11-25 07:09:11,404 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 08:09:11] 2025-11-25 07:09:11,404 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 08:09:11] 2025-11-25 07:09:11,404 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 08:09:11] 2025-11-25 07:09:11,404 | INFO     | [monitor] control thread has ended
[2025-11-25 08:09:11] 2025-11-25 07:09:11,443 [wrapper] ==== pilot stdout END ====
[2025-11-25 08:09:11] 2025-11-25 07:09:11,445 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 08:09:11] 2025-11-25 07:09:11,447 [wrapper] pilotpid: 1218462
[2025-11-25 08:09:11] 2025-11-25 07:09:11,449 [wrapper] Pilot exit status: 0
[2025-11-25 08:09:11] 2025-11-25 07:09:11,455 [wrapper] pandaids: 6893840240
[2025-11-25 08:09:11] 2025-11-25 07:09:11,466 [wrapper] cleanup supervisor_pilot 1297366 1218463
[2025-11-25 08:09:11] 2025-11-25 07:09:11,468 [wrapper] Test setup, not cleaning
[2025-11-25 08:09:11] 2025-11-25 07:09:11,470 [wrapper] apfmon messages muted
[2025-11-25 08:09:11] 2025-11-25 07:09:11,472 [wrapper] ==== wrapper stdout END ====
[2025-11-25 08:09:11] 2025-11-25 07:09:11,474 [wrapper] ==== wrapper stderr END ====
[2025-11-25 08:09:11]  *** Error codes and diagnostics ***
[2025-11-25 08:09:11]     "exeErrorCode": 0,
[2025-11-25 08:09:11]     "exeErrorDiag": "",
[2025-11-25 08:09:11]     "pilotErrorCode": 0,
[2025-11-25 08:09:11]     "pilotErrorDiag": "",
[2025-11-25 08:09:11]  *** Listing of results directory ***
[2025-11-25 08:09:11] total 1317120
[2025-11-25 08:09:11] -rw-r--r-- 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-25 08:09:11] -rwx------ 1 boinc boinc     36292 Nov 20 11:20 runpilot2-wrapper.sh
[2025-11-25 08:09:11] -rw-r--r-- 1 boinc boinc      5112 Nov 20 11:21 queuedata.json
[2025-11-25 08:09:11] -rw-r--r-- 1 boinc boinc       100 Nov 24 20:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 08:09:11] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 20:03 run_atlas
[2025-11-25 08:09:11] -rw-r--r-- 1 boinc boinc       105 Nov 24 20:03 job.xml
[2025-11-25 08:09:11] -rw-r--r-- 2 boinc boinc 409127435 Nov 24 20:03 EVNT.47493127._000169.pool.root.1
[2025-11-25 08:09:11] drwxrwx--x 2 boinc boinc      4096 Nov 24 20:03 shared
[2025-11-25 08:09:11] -rw-r--r-- 2 boinc boinc    590104 Nov 24 20:03 input.tar.gz
[2025-11-25 08:09:11] -rw-r--r-- 2 boinc boinc     15847 Nov 24 20:03 start_atlas.sh
[2025-11-25 08:09:11] -rw-r--r-- 1 boinc boinc         0 Nov 24 20:03 boinc_setup_complete
[2025-11-25 08:09:11] -rw-r--r-- 1 boinc boinc      6205 Nov 24 20:03 init_data.xml
[2025-11-25 08:09:11] -rw-r--r-- 1 boinc boinc         0 Nov 24 20:03 boinc_lockfile
[2025-11-25 08:09:11] -rw-r--r-- 1 boinc boinc      2786 Nov 24 20:03 pandaJob.out
[2025-11-25 08:09:11] -rw------- 1 boinc boinc    991801 Nov 24 20:03 agis_schedconf.cvmfs.json
[2025-11-25 08:09:11] drwx------ 5 boinc boinc      4096 Nov 24 20:03 pilot3
[2025-11-25 08:09:11] -rw-r--r-- 1 boinc boinc       532 Nov 25 08:05 boinc_task_state.xml
[2025-11-25 08:09:11] -rw------- 1 boinc boinc 921046013 Nov 25 08:08 HITS.47523449._001686.pool.root.1
[2025-11-25 08:09:11] -rw------- 1 boinc boinc      1026 Nov 25 08:08 memory_monitor_summary.json
[2025-11-25 08:09:11] -rw------- 1 boinc boinc   1516227 Nov 25 08:08 agis_ddmendpoints.agis.ALL.json
[2025-11-25 08:09:11] -rw------- 1 boinc boinc   1213937 Nov 25 08:08 log.47523449._001686.job.log.tgz.1
[2025-11-25 08:09:11] -rw------- 1 boinc boinc      8565 Nov 25 08:08 heartbeat.json
[2025-11-25 08:09:11] -rw-r--r-- 1 boinc boinc        28 Nov 25 08:09 wrapper_checkpoint.txt
[2025-11-25 08:09:11] -rw-r--r-- 1 boinc boinc      8192 Nov 25 08:09 boinc_mmap_file
[2025-11-25 08:09:11] -rw------- 1 boinc boinc       747 Nov 25 08:09 pilotlog.txt
[2025-11-25 08:09:11] -rw------- 1 boinc boinc        95 Nov 25 08:09 pilot_heartbeat.json
[2025-11-25 08:09:11] -rw------- 1 boinc boinc   6103680 Nov 25 08:09 log.47523449._001686.job.log.1
[2025-11-25 08:09:11] -rw------- 1 boinc boinc       353 Nov 25 08:09 output.list
[2025-11-25 08:09:11] -rw-r--r-- 1 boinc boinc       620 Nov 25 08:09 runtime_log
[2025-11-25 08:09:11] -rw------- 1 boinc boinc   7342080 Nov 25 08:09 result.tar.gz
[2025-11-25 08:09:11] -rw-r--r-- 1 boinc boinc      8898 Nov 25 08:09 runtime_log.err
[2025-11-25 08:09:11] -rw------- 1 boinc boinc       666 Nov 25 08:09 6c8NDmrwGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyMHKDmIczkOn.diag
[2025-11-25 08:09:11] -rw-r--r-- 1 boinc boinc     21248 Nov 25 08:09 stderr.txt
[2025-11-25 08:09:11] HITS file was successfully produced:
[2025-11-25 08:09:11] -rw------- 1 boinc boinc 921046013 Nov 25 08:08 shared/HITS.pool.root.1
[2025-11-25 08:09:11]  *** Contents of shared directory: ***
[2025-11-25 08:09:11] total 1306776
[2025-11-25 08:09:11] -rw-r--r-- 2 boinc boinc 409127435 Nov 24 20:03 ATLAS.root_0
[2025-11-25 08:09:11] -rw-r--r-- 2 boinc boinc    590104 Nov 24 20:03 input.tar.gz
[2025-11-25 08:09:11] -rw-r--r-- 2 boinc boinc     15847 Nov 24 20:03 start_atlas.sh
[2025-11-25 08:09:11] -rw------- 1 boinc boinc 921046013 Nov 25 08:08 HITS.pool.root.1
[2025-11-25 08:09:11] -rw------- 1 boinc boinc   7342080 Nov 25 08:09 result.tar.gz
08:09:13 (1214752): run_atlas exited; CPU time 86226.213381
08:09:13 (1214752): called boinc_finish(0)

</stderr_txt>
]]>

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