Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:57:50 (1127939): wrapper (7.7.26015): starting
07:57:50 (1127939): wrapper: running run_atlas (--nthreads 2)
[2025-11-24 07:57:50] Arguments: --nthreads 2
[2025-11-24 07:57:50] Threads: 2
[2025-11-24 07:57:50] Checking for CVMFS
[2025-11-24 07:57:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 07:57:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 07:57:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 07:57:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 07:57:51] 2.9.2.0 187177 7991 61092 153236 3 81 31181213 36864001 0 130560 0 2573380 99.903 444518 6415 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 07:57:51] CVMFS is ok
[2025-11-24 07:57:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 07:57:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 07:57:51] Further information can be found at the LHC@home message board.
[2025-11-24 07:57:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 07:57:51] Checking for apptainer binary...
[2025-11-24 07:57:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 07:57:51] Running /usr/bin/apptainer --version
[2025-11-24 07:57:51] apptainer version 1.4.1-1.1
[2025-11-24 07:57:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 07:57:51] thA366
[2025-11-24 07:57:51] apptainer works
[2025-11-24 07:57:51] Set ATHENA_PROC_NUMBER=2
[2025-11-24 07:57:51] Set ATHENA_CORE_NUMBER=2
[2025-11-24 07:57:51] Starting ATLAS job with PandaID=6893843637
[2025-11-24 07:57:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 20:03:14]  *** The last 200 lines of the pilot log: ***
[2025-11-24 20:03:14] 2025-11-24 19:02:28,134 | INFO     | PID=1131652 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 20:03:14] 2025-11-24 19:02:29,134 | INFO     | time since job start (43465s) is within the limit (172800.0s)
[2025-11-24 20:03:14] 2025-11-24 19:02:29,279 | INFO     | monitor loop #3318: job 0:6893843637 is in state 'finished'
[2025-11-24 20:03:14] 2025-11-24 19:02:29,280 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 20:03:14] 2025-11-24 19:02:29,910 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 20:03:14] 2025-11-24 19:02:29,911 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 3218.94725
[2025-11-24 20:03:14] 2025-11-24 19:02:29,912 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6893843637/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 20:03:14] 2025-11-24 19:02:29,912 | INFO     | extracted standard info from prmon json
[2025-11-24 20:03:14] 2025-11-24 19:02:29,912 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 20:03:14] 2025-11-24 19:02:29,912 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 20:03:14] 2025-11-24 19:02:29,916 | INFO     | fitting pss+swap vs Time
[2025-11-24 20:03:14] 2025-11-24 19:02:29,917 | INFO     | sum of square deviations: 111922537578.0
[2025-11-24 20:03:14] 2025-11-24 19:02:29,921 | INFO     | sum of deviations: 280298762449.5
[2025-11-24 20:03:14] 2025-11-24 19:02:29,921 | INFO     | mean x: 1763989198.5
[2025-11-24 20:03:14] 2025-11-24 19:02:29,921 | INFO     | mean y: 2023437.4508426967
[2025-11-24 20:03:14] 2025-11-24 19:02:29,921 | INFO     | intersect: -4415710470.42497
[2025-11-24 20:03:14] 2025-11-24 19:02:29,921 | INFO     | chi2: 2.8533020938742726
[2025-11-24 20:03:14] 2025-11-24 19:02:29,921 | INFO     | sum of square deviations: 109581135538.0
[2025-11-24 20:03:14] 2025-11-24 19:02:29,925 | INFO     | sum of deviations: 334775303286.00006
[2025-11-24 20:03:14] 2025-11-24 19:02:29,925 | INFO     | mean x: 1763989046.0
[2025-11-24 20:03:14] 2025-11-24 19:02:29,925 | INFO     | mean y: 2026971.2050919377
[2025-11-24 20:03:14] 2025-11-24 19:02:29,926 | INFO     | intersect: -5387038993.192106
[2025-11-24 20:03:14] 2025-11-24 19:02:29,926 | INFO     | chi2: 2.103199582445022
[2025-11-24 20:03:14] 2025-11-24 19:02:29,926 | INFO     | current chi2=2.103199582445022 (change=26.288927241165194 %)
[2025-11-24 20:03:14] 2025-11-24 19:02:29,926 | INFO     | sum of square deviations: 107272617835.5
[2025-11-24 20:03:14] 2025-11-24 19:02:29,931 | INFO     | sum of deviations: 331361393176.5
[2025-11-24 20:03:14] 2025-11-24 19:02:29,931 | INFO     | mean x: 1763988893.5
[2025-11-24 20:03:14] 2025-11-24 19:02:29,931 | INFO     | mean y: 2026745.7678062678
[2025-11-24 20:03:14] 2025-11-24 19:02:29,931 | INFO     | intersect: -5446873720.093638
[2025-11-24 20:03:14] 2025-11-24 19:02:29,931 | INFO     | chi2: 2.1026642475862
[2025-11-24 20:03:14] 2025-11-24 19:02:29,931 | INFO     | current chi2=2.1026642475862 (change=0.025453355130464525 %)
[2025-11-24 20:03:14] 2025-11-24 19:02:29,931 | INFO     | right removable region: 701
[2025-11-24 20:03:14] 2025-11-24 19:02:29,931 | INFO     | sum of square deviations: 109581135538.0
[2025-11-24 20:03:14] 2025-11-24 19:02:29,936 | INFO     | sum of deviations: 152155369825.0
[2025-11-24 20:03:14] 2025-11-24 19:02:29,936 | INFO     | mean x: 1763989351.0
[2025-11-24 20:03:14] 2025-11-24 19:02:29,936 | INFO     | mean y: 2031773.9137199435
[2025-11-24 20:03:14] 2025-11-24 19:02:29,936 | INFO     | intersect: -2447299041.568587
[2025-11-24 20:03:14] 2025-11-24 19:02:29,936 | INFO     | chi2: 0.9485117418976488
[2025-11-24 20:03:14] 2025-11-24 19:02:29,936 | INFO     | current chi2=0.9485117418976488 (change=66.7574021014459 %)
[2025-11-24 20:03:14] 2025-11-24 19:02:29,936 | INFO     | sum of square deviations: 107272617835.5
[2025-11-24 20:03:14] 2025-11-24 19:02:29,941 | INFO     | sum of deviations: 126880046055.0002
[2025-11-24 20:03:14] 2025-11-24 19:02:29,941 | INFO     | mean x: 1763989503.5
[2025-11-24 20:03:14] 2025-11-24 19:02:29,941 | INFO     | mean y: 2033437.9173789173
[2025-11-24 20:03:14] 2025-11-24 19:02:29,941 | INFO     | intersect: -2084380354.9093425
[2025-11-24 20:03:14] 2025-11-24 19:02:29,941 | INFO     | chi2: 0.8148295656177449
[2025-11-24 20:03:14] 2025-11-24 19:02:29,941 | INFO     | current chi2=0.8148295656177449 (change=14.093887336855882 %)
[2025-11-24 20:03:14] 2025-11-24 19:02:29,941 | INFO     | left removable region: 20
[2025-11-24 20:03:14] 2025-11-24 19:02:29,941 | INFO     | sum of square deviations: 97930691980.0
[2025-11-24 20:03:14] 2025-11-24 19:02:29,945 | INFO     | sum of deviations: 165940554072.0
[2025-11-24 20:03:14] 2025-11-24 19:02:29,945 | INFO     | mean x: 1763989473.0
[2025-11-24 20:03:14] 2025-11-24 19:02:29,945 | INFO     | mean y: 2037843.3568281939
[2025-11-24 20:03:14] 2025-11-24 19:02:29,945 | INFO     | intersect: -2986988217.916953
[2025-11-24 20:03:14] 2025-11-24 19:02:29,945 | INFO     | chi2: 0.059216526564805166
[2025-11-24 20:03:14] 2025-11-24 19:02:29,945 | INFO     | current memory leak: 1.69 B/s (using 681 data points, chi2=0.06)
[2025-11-24 20:03:14] 2025-11-24 19:02:29,946 | INFO     | could have reported an average CPU frequency of 4517 MHz (27 samples)
[2025-11-24 20:03:14] 2025-11-24 19:02:29,946 | INFO     | ..............................
[2025-11-24 20:03:14] 2025-11-24 19:02:29,946 | INFO     | . Timing measurements:
[2025-11-24 20:03:14] 2025-11-24 19:02:29,946 | INFO     | . get job = 0 s
[2025-11-24 20:03:14] 2025-11-24 19:02:29,946 | INFO     | . initial setup = 1 s
[2025-11-24 20:03:14] 2025-11-24 19:02:29,946 | INFO     | . payload setup = 7 s
[2025-11-24 20:03:14] 2025-11-24 19:02:29,946 | INFO     | . stage-in = 0 s
[2025-11-24 20:03:14] 2025-11-24 19:02:29,946 | INFO     | . payload execution = 43425 s
[2025-11-24 20:03:14] 2025-11-24 19:02:29,946 | INFO     | . stage-out = 1 s
[2025-11-24 20:03:14] 2025-11-24 19:02:29,946 | INFO     | . log creation = 0 s
[2025-11-24 20:03:14] 2025-11-24 19:02:29,946 | INFO     | ..............................
[2025-11-24 20:03:14] 2025-11-24 19:02:30,393 | INFO     | 
[2025-11-24 20:03:14] 2025-11-24 19:02:30,394 | INFO     | job summary report
[2025-11-24 20:03:14] 2025-11-24 19:02:30,394 | INFO     | --------------------------------------------------
[2025-11-24 20:03:14] 2025-11-24 19:02:30,394 | INFO     | PanDA job id: 6893843637
[2025-11-24 20:03:14] 2025-11-24 19:02:30,395 | INFO     | task id: 47523449
[2025-11-24 20:03:14] 2025-11-24 19:02:30,395 | INFO     | errors: (none)
[2025-11-24 20:03:14] 2025-11-24 19:02:30,395 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 20:03:14] 2025-11-24 19:02:30,396 | INFO     | pilot state: finished 
[2025-11-24 20:03:14] 2025-11-24 19:02:30,396 | INFO     | transexitcode: 0
[2025-11-24 20:03:14] 2025-11-24 19:02:30,396 | INFO     | exeerrorcode: 0
[2025-11-24 20:03:14] 2025-11-24 19:02:30,396 | INFO     | exeerrordiag: 
[2025-11-24 20:03:14] 2025-11-24 19:02:30,396 | INFO     | exitcode: 0
[2025-11-24 20:03:14] 2025-11-24 19:02:30,396 | INFO     | exitmsg: OK
[2025-11-24 20:03:14] 2025-11-24 19:02:30,396 | INFO     | cpuconsumptiontime: 86064 s
[2025-11-24 20:03:14] 2025-11-24 19:02:30,397 | INFO     | nevents: 1000
[2025-11-24 20:03:14] 2025-11-24 19:02:30,397 | INFO     | neventsw: 0
[2025-11-24 20:03:14] 2025-11-24 19:02:30,397 | INFO     | pid: 1138080
[2025-11-24 20:03:14] 2025-11-24 19:02:30,397 | INFO     | pgrp: 1138080
[2025-11-24 20:03:14] 2025-11-24 19:02:30,397 | INFO     | corecount: 2
[2025-11-24 20:03:14] 2025-11-24 19:02:30,397 | INFO     | event service: False
[2025-11-24 20:03:14] 2025-11-24 19:02:30,397 | INFO     | sizes: {0: 2298810, 8: 2299072, 11: 2299100, 43436: 2344957, 43438: 2354748, 43440: 2354804, 43447: 2355178}
[2025-11-24 20:03:14] 2025-11-24 19:02:30,398 | INFO     | --------------------------------------------------
[2025-11-24 20:03:14] 2025-11-24 19:02:30,398 | INFO     | 
[2025-11-24 20:03:14] 2025-11-24 19:02:30,398 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-24 20:03:14] 2025-11-24 19:02:30,410 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 20:03:14] 2025-11-24 19:02:30,410 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 20:03:14] 2025-11-24 19:02:30,410 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 20:03:14] 2025-11-24 19:02:30,410 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 20:03:14] 2025-11-24 19:02:30,410 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 20:03:14] 2025-11-24 19:02:30,411 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 20:03:14] 2025-11-24 19:02:30,411 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 20:03:14] 2025-11-24 19:02:30,411 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 20:03:14] 2025-11-24 19:02:30,411 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 20:03:14] 2025-11-24 19:02:30,411 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 20:03:14] 2025-11-24 19:02:30,411 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 20:03:14] 2025-11-24 19:02:30,411 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 20:03:14] 2025-11-24 19:02:30,411 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 20:03:14] 2025-11-24 19:02:30,411 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 20:03:14] 2025-11-24 19:02:30,411 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 20:03:14] 2025-11-24 19:02:30,411 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 20:03:14] 2025-11-24 19:02:30,411 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 20:03:14] 2025-11-24 19:02:30,411 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 20:03:14] 2025-11-24 19:02:30,411 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 20:03:14] 2025-11-24 19:02:30,411 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 20:03:14] 2025-11-24 19:02:30,411 | INFO     | job 6893843637 has completed (purged errors)
[2025-11-24 20:03:14] 2025-11-24 19:02:30,411 | INFO     | overall cleanup function is called
[2025-11-24 20:03:14] 2025-11-24 19:02:31,418 | INFO     | --- collectZombieJob: --- 10, [1138080]
[2025-11-24 20:03:14] 2025-11-24 19:02:31,419 | INFO     | zombie collector waiting for pid 1138080
[2025-11-24 20:03:14] 2025-11-24 19:02:31,419 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 20:03:14] 2025-11-24 19:02:31,419 | INFO     | collected zombie processes
[2025-11-24 20:03:14] 2025-11-24 19:02:31,419 | INFO     | will attempt to kill all subprocesses of pid=1138080
[2025-11-24 20:03:14] 2025-11-24 19:02:31,453 | INFO     | process IDs to be killed: [1138080] (in reverse order)
[2025-11-24 20:03:14] 2025-11-24 19:02:31,474 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 20:03:14] 2025-11-24 19:02:31,474 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 20:03:14] 2025-11-24 19:02:31,475 | INFO     | did not find any defunct processes belonging to 1138080
[2025-11-24 20:03:14] 2025-11-24 19:02:31,475 | INFO     | did not find any defunct processes belonging to 1138080
[2025-11-24 20:03:14] 2025-11-24 19:02:31,476 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 20:03:14] 2025-11-24 19:02:31,476 | INFO     | ready for new job
[2025-11-24 20:03:14] 2025-11-24 19:02:31,476 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 20:03:14] 2025-11-24 19:02:31,477 | INFO     | ***************************************
[2025-11-24 20:03:14] 2025-11-24 19:02:31,477 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 20:03:14] 2025-11-24 19:02:31,477 | INFO     | ***************************************
[2025-11-24 20:03:14] 2025-11-24 19:02:31,477 | INFO     | 
[2025-11-24 20:03:14] 2025-11-24 19:02:31,477 | INFO     | architecture information:
[2025-11-24 20:03:14] 2025-11-24 19:02:31,478 | INFO     | executing command: cat /etc/os-release
[2025-11-24 20:03:14] 2025-11-24 19:02:31,485 | INFO     | cat /etc/os-release:
[2025-11-24 20:03:14] NAME="CentOS Linux"
[2025-11-24 20:03:14] VERSION="7 (Core)"
[2025-11-24 20:03:14] ID="centos"
[2025-11-24 20:03:14] ID_LIKE="rhel fedora"
[2025-11-24 20:03:14] VERSION_ID="7"
[2025-11-24 20:03:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 20:03:14] ANSI_COLOR="0;31"
[2025-11-24 20:03:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 20:03:14] HOME_URL="https://www.centos.org/"
[2025-11-24 20:03:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 20:03:14] 
[2025-11-24 20:03:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 20:03:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 20:03:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 20:03:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 20:03:14] 
[2025-11-24 20:03:14] 2025-11-24 19:02:31,485 | INFO     | ***************************************
[2025-11-24 20:03:14] 2025-11-24 19:02:31,988 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-24 20:03:14] 2025-11-24 19:02:32,001 | INFO     | sufficient remaining disk space (489101983744 B)
[2025-11-24 20:03:14] 2025-11-24 19:02:32,001 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 20:03:14] 2025-11-24 19:02:32,002 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 20:03:14] 2025-11-24 19:02:32,002 | INFO     | update_server=False
[2025-11-24 20:03:14] 2025-11-24 19:02:32,002 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 20:03:14] 2025-11-24 19:02:32,002 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 20:03:14] 2025-11-24 19:02:32,556 | INFO     | all payload control threads have been joined
[2025-11-24 20:03:14] 2025-11-24 19:02:32,689 | INFO     | all data control threads have been joined
[2025-11-24 20:03:14] 2025-11-24 19:02:32,789 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 20:03:14] 2025-11-24 19:02:32,790 | INFO     | aborting loop
[2025-11-24 20:03:14] 2025-11-24 19:02:33,007 | INFO     | [job] retrieve thread has finished
[2025-11-24 20:03:14] 2025-11-24 19:02:33,168 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 20:03:14] 2025-11-24 19:02:33,249 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 20:03:14] 2025-11-24 19:02:33,348 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 20:03:14] 2025-11-24 19:02:33,376 | INFO     | [data] copytool_in thread has finished
[2025-11-24 20:03:14] 2025-11-24 19:02:33,447 | INFO     | [payload] failed_post thread has finished
[2025-11-24 20:03:14] 2025-11-24 19:02:33,535 | INFO     | all job control threads have been joined
[2025-11-24 20:03:14] 2025-11-24 19:02:33,562 | INFO     | [payload] control thread has finished
[2025-11-24 20:03:14] 2025-11-24 19:02:33,661 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 20:03:14] 2025-11-24 19:02:33,667 | INFO     | [job] validate thread has finished
[2025-11-24 20:03:14] 2025-11-24 19:02:33,681 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 20:03:14] 2025-11-24 19:02:33,694 | INFO     | [data] control thread has finished
[2025-11-24 20:03:14] 2025-11-24 19:02:33,795 | INFO     | [job] job monitor thread has finished
[2025-11-24 20:03:14] 2025-11-24 19:02:34,008 | INFO     | [data] copytool_out thread has finished
[2025-11-24 20:03:14] 2025-11-24 19:02:34,288 | INFO     | [payload] validate_post thread has finished
[2025-11-24 20:03:14] 2025-11-24 19:02:34,541 | INFO     | [job] control thread has finished
[2025-11-24 20:03:14] 2025-11-24 19:02:34,986 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 20:03:14] 2025-11-24 19:02:35,992 | INFO     | [job] queue monitor thread has finished
[2025-11-24 20:03:14] 2025-11-24 19:02:37,257 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 20:03:14] 2025-11-24 19:03:02,245 | INFO     | PID=1131652 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 20:03:14] 2025-11-24 19:03:02,246 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 20:03:14] 2025-11-24 19:03:02,246 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 20:03:14] 2025-11-24 19:03:02,246 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 20:03:14] 2025-11-24 19:03:07,495 | INFO     | [monitor] cgroup control has ended
[2025-11-24 20:03:14] 2025-11-24 19:03:09,027 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140608934324032)>', '<ExcThread(monitor, started 140608144393984)>']
[2025-11-24 20:03:14] 2025-11-24 19:03:09,283 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 20:03:14] 2025-11-24 19:03:09,284 | INFO     | [monitor] control thread has ended
[2025-11-24 20:03:14] 2025-11-24 19:03:14,053 | INFO     | all workflow threads have been joined
[2025-11-24 20:03:14] 2025-11-24 19:03:14,053 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 20:03:14] 2025-11-24 19:03:14,054 | INFO     | traces error code: 0
[2025-11-24 20:03:14] 2025-11-24 19:03:14,054 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 20:03:14] 2025-11-24 19:03:14,097 [wrapper] ==== pilot stdout END ====
[2025-11-24 20:03:14] 2025-11-24 19:03:14,100 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 20:03:14] 2025-11-24 19:03:14,102 [wrapper] pilotpid: 1131652
[2025-11-24 20:03:14] 2025-11-24 19:03:14,104 [wrapper] Pilot exit status: 0
[2025-11-24 20:03:14] 2025-11-24 19:03:14,110 [wrapper] pandaids: 6893843637
[2025-11-24 20:03:14] 2025-11-24 19:03:14,124 [wrapper] cleanup supervisor_pilot 1212125 1131653
[2025-11-24 20:03:14] 2025-11-24 19:03:14,126 [wrapper] Test setup, not cleaning
[2025-11-24 20:03:14] 2025-11-24 19:03:14,128 [wrapper] apfmon messages muted
[2025-11-24 20:03:14] 2025-11-24 19:03:14,130 [wrapper] ==== wrapper stdout END ====
[2025-11-24 20:03:14] 2025-11-24 19:03:14,131 [wrapper] ==== wrapper stderr END ====
[2025-11-24 20:03:14]  *** Error codes and diagnostics ***
[2025-11-24 20:03:14]     "exeErrorCode": 0,
[2025-11-24 20:03:14]     "exeErrorDiag": "",
[2025-11-24 20:03:14]     "pilotErrorCode": 0,
[2025-11-24 20:03:14]     "pilotErrorDiag": "",
[2025-11-24 20:03:14]  *** Listing of results directory ***
[2025-11-24 20:03:14] total 1321464
[2025-11-24 20:03:14] -rw-r--r-- 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-24 20:03:14] -rwx------ 1 boinc boinc     36292 Nov 20 11:22 runpilot2-wrapper.sh
[2025-11-24 20:03:14] -rw-r--r-- 1 boinc boinc      5112 Nov 20 11:23 queuedata.json
[2025-11-24 20:03:14] -rw-r--r-- 1 boinc boinc       100 Nov 24 07:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 20:03:14] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 07:57 run_atlas
[2025-11-24 20:03:14] -rw-r--r-- 1 boinc boinc       105 Nov 24 07:57 job.xml
[2025-11-24 20:03:14] -rw-r--r-- 2 boinc boinc 412291882 Nov 24 07:57 EVNT.47493127._000205.pool.root.1
[2025-11-24 20:03:14] drwxrwx--x 2 boinc boinc      4096 Nov 24 07:57 shared
[2025-11-24 20:03:14] -rw-r--r-- 2 boinc boinc    590102 Nov 24 07:57 input.tar.gz
[2025-11-24 20:03:14] -rw-r--r-- 2 boinc boinc     15847 Nov 24 07:57 start_atlas.sh
[2025-11-24 20:03:14] -rw-r--r-- 1 boinc boinc         0 Nov 24 07:57 boinc_setup_complete
[2025-11-24 20:03:14] -rw-r--r-- 1 boinc boinc      6204 Nov 24 07:57 init_data.xml
[2025-11-24 20:03:14] -rw-r--r-- 1 boinc boinc         0 Nov 24 07:57 boinc_lockfile
[2025-11-24 20:03:14] -rw-r--r-- 1 boinc boinc      2786 Nov 24 07:57 pandaJob.out
[2025-11-24 20:03:14] -rw------- 1 boinc boinc    989786 Nov 24 07:58 agis_schedconf.cvmfs.json
[2025-11-24 20:03:14] drwx------ 5 boinc boinc      4096 Nov 24 07:58 pilot3
[2025-11-24 20:03:14] -rw-r--r-- 1 boinc boinc       531 Nov 24 19:59 boinc_task_state.xml
[2025-11-24 20:03:14] -rw------- 1 boinc boinc 922343902 Nov 24 20:01 HITS.47523449._002049.pool.root.1
[2025-11-24 20:03:14] -rw------- 1 boinc boinc        95 Nov 24 20:02 pilot_heartbeat.json
[2025-11-24 20:03:14] -rw------- 1 boinc boinc      1022 Nov 24 20:02 memory_monitor_summary.json
[2025-11-24 20:03:14] -rw------- 1 boinc boinc   1516227 Nov 24 20:02 agis_ddmendpoints.agis.ALL.json
[2025-11-24 20:03:14] -rw------- 1 boinc boinc   1213337 Nov 24 20:02 log.47523449._002049.job.log.tgz.1
[2025-11-24 20:03:14] -rw------- 1 boinc boinc      8562 Nov 24 20:02 heartbeat.json
[2025-11-24 20:03:14] -rw-r--r-- 1 boinc boinc      8192 Nov 24 20:03 boinc_mmap_file
[2025-11-24 20:03:14] -rw-r--r-- 1 boinc boinc        28 Nov 24 20:03 wrapper_checkpoint.txt
[2025-11-24 20:03:14] -rw------- 1 boinc boinc      4752 Nov 24 20:03 pilotlog.txt
[2025-11-24 20:03:14] -rw------- 1 boinc boinc   6099312 Nov 24 20:03 log.47523449._002049.job.log.1
[2025-11-24 20:03:14] -rw------- 1 boinc boinc       353 Nov 24 20:03 output.list
[2025-11-24 20:03:14] -rw-r--r-- 1 boinc boinc       620 Nov 24 20:03 runtime_log
[2025-11-24 20:03:14] -rw------- 1 boinc boinc   7331840 Nov 24 20:03 result.tar.gz
[2025-11-24 20:03:14] -rw-r--r-- 1 boinc boinc      8898 Nov 24 20:03 runtime_log.err
[2025-11-24 20:03:14] -rw------- 1 boinc boinc       666 Nov 24 20:03 bTfMDmqyGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqRGKDmwYlpln.diag
[2025-11-24 20:03:14] -rw-r--r-- 1 boinc boinc     21350 Nov 24 20:03 stderr.txt
[2025-11-24 20:03:14] HITS file was successfully produced:
[2025-11-24 20:03:14] -rw------- 1 boinc boinc 922343902 Nov 24 20:01 shared/HITS.pool.root.1
[2025-11-24 20:03:14]  *** Contents of shared directory: ***
[2025-11-24 20:03:14] total 1311124
[2025-11-24 20:03:14] -rw-r--r-- 2 boinc boinc 412291882 Nov 24 07:57 ATLAS.root_0
[2025-11-24 20:03:14] -rw-r--r-- 2 boinc boinc    590102 Nov 24 07:57 input.tar.gz
[2025-11-24 20:03:14] -rw-r--r-- 2 boinc boinc     15847 Nov 24 07:57 start_atlas.sh
[2025-11-24 20:03:14] -rw------- 1 boinc boinc 922343902 Nov 24 20:01 HITS.pool.root.1
[2025-11-24 20:03:14] -rw------- 1 boinc boinc   7331840 Nov 24 20:03 result.tar.gz
20:03:15 (1127939): run_atlas exited; CPU time 86189.656348
20:03:15 (1127939): called boinc_finish(0)

</stderr_txt>
]]>

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