Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:19:39 (3027931): wrapper (7.7.26015): starting
09:19:39 (3027931): wrapper: running run_atlas (--nthreads 2)
[2025-11-23 09:19:39] Arguments: --nthreads 2
[2025-11-23 09:19:39] Threads: 2
[2025-11-23 09:19:39] Checking for CVMFS
[2025-11-23 09:19:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 09:19:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 09:19:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 09:19:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 09:19:40] 2.9.2.0 2254411 6693 58472 153202 2 80 35763873 36864000 0 130560 0 2140161 99.893 397811 5450 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-23 09:19:40] CVMFS is ok
[2025-11-23 09:19:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 09:19:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 09:19:40] Further information can be found at the LHC@home message board.
[2025-11-23 09:19:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 09:19:40] Checking for apptainer binary...
[2025-11-23 09:19:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 09:19:40] Running /usr/bin/apptainer --version
[2025-11-23 09:19:40] apptainer version 1.4.1-1.1
[2025-11-23 09:19:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 09:19:40] thA331
[2025-11-23 09:19:40] apptainer works
[2025-11-23 09:19:40] Set ATHENA_PROC_NUMBER=2
[2025-11-23 09:19:40] Set ATHENA_CORE_NUMBER=2
[2025-11-23 09:19:40] Starting ATLAS job with PandaID=6893840229
[2025-11-23 09:19:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 21:53:18]  *** The last 200 lines of the pilot log: ***
[2025-11-23 21:53:18] ID="centos"
[2025-11-23 21:53:18] ID_LIKE="rhel fedora"
[2025-11-23 21:53:18] VERSION_ID="7"
[2025-11-23 21:53:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 21:53:18] ANSI_COLOR="0;31"
[2025-11-23 21:53:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 21:53:18] HOME_URL="https://www.centos.org/"
[2025-11-23 21:53:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 21:53:18] 
[2025-11-23 21:53:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 21:53:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 21:53:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 21:53:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 21:53:18] 
[2025-11-23 21:53:18] 2025-11-23 20:52:47,342 | INFO     | ***************************************
[2025-11-23 21:53:18] 2025-11-23 20:52:47,845 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-23 21:53:18] 2025-11-23 20:52:47,875 | INFO     | sufficient remaining disk space (221682597888 B)
[2025-11-23 21:53:18] 2025-11-23 20:52:47,875 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 21:53:18] 2025-11-23 20:52:47,876 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 21:53:18] 2025-11-23 20:52:47,876 | INFO     | update_server=False
[2025-11-23 21:53:18] 2025-11-23 20:52:47,876 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 21:53:18] 2025-11-23 20:52:47,876 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 21:53:18] 2025-11-23 20:52:47,877 | INFO     | aborting loop
[2025-11-23 21:53:18] 2025-11-23 20:52:47,877 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 21:53:18] 2025-11-23 20:52:47,878 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 21:53:18] 2025-11-23 20:52:48,062 | INFO     | all data control threads have been joined
[2025-11-23 21:53:18] 2025-11-23 20:52:48,539 | INFO     | all payload control threads have been joined
[2025-11-23 21:53:18] 2025-11-23 20:52:48,877 | INFO     | [job] retrieve thread has finished
[2025-11-23 21:53:18] 2025-11-23 20:52:48,882 | INFO     | [job] job monitor thread has finished
[2025-11-23 21:53:18] 2025-11-23 20:52:48,883 | INFO     | [job] queue monitor thread has finished
[2025-11-23 21:53:18] 2025-11-23 20:52:48,969 | INFO     | all job control threads have been joined
[2025-11-23 21:53:18] 2025-11-23 20:52:49,069 | INFO     | [data] control thread has finished
[2025-11-23 21:53:18] 2025-11-23 20:52:49,258 | INFO     | [payload] validate_post thread has finished
[2025-11-23 21:53:18] 2025-11-23 20:52:49,302 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 21:53:18] 2025-11-23 20:52:49,333 | INFO     | [data] copytool_in thread has finished
[2025-11-23 21:53:18] 2025-11-23 20:52:49,540 | INFO     | [payload] control thread has finished
[2025-11-23 21:53:18] 2025-11-23 20:52:49,574 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 21:53:18] 2025-11-23 20:52:49,729 | INFO     | [job] validate thread has finished
[2025-11-23 21:53:18] 2025-11-23 20:52:49,810 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 21:53:18] 2025-11-23 20:52:49,975 | INFO     | [job] control thread has finished
[2025-11-23 21:53:18] 2025-11-23 20:52:50,307 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 21:53:18] 2025-11-23 20:52:50,312 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 21:53:18] 2025-11-23 20:52:50,316 | INFO     | [payload] failed_post thread has finished
[2025-11-23 21:53:18] 2025-11-23 20:52:51,305 | INFO     | [data] copytool_out thread has finished
[2025-11-23 21:53:18] 2025-11-23 20:52:51,884 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 21:53:18] 2025-11-23 20:52:59,994 | INFO     | [monitor] cgroup control has ended
[2025-11-23 21:53:18] 2025-11-23 20:53:00,596 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139879071446848)>', '<ExcThread(monitor, started 139878209672960)>']
[2025-11-23 21:53:18] 2025-11-23 20:53:05,622 | INFO     | all workflow threads have been joined
[2025-11-23 21:53:18] 2025-11-23 20:53:05,622 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 21:53:18] 2025-11-23 20:53:05,623 | INFO     | traces error code: 0
[2025-11-23 21:53:18] 2025-11-23 20:53:05,623 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 21:53:18] 2025-11-23 20:53:18,795 | INFO     | PID=3031640 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 21:53:18] 2025-11-23 20:53:18,795 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 21:53:18] 2025-11-23 20:53:18,795 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 21:53:18] 2025-11-23 20:53:18,795 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 21:53:18] 2025-11-23 20:53:18,795 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 21:53:18] 2025-11-23 20:53:18,795 | INFO     | [monitor] control thread has ended
[2025-11-23 21:53:18] 2025-11-23 20:53:18,833 [wrapper] ==== pilot stdout END ====
[2025-11-23 21:53:18] 2025-11-23 20:53:18,836 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 21:53:18] 2025-11-23 20:53:18,838 [wrapper] pilotpid: 3031640
[2025-11-23 21:53:18] 2025-11-23 20:53:18,841 [wrapper] Pilot exit status: 0
[2025-11-23 21:53:18] 2025-11-23 20:53:18,847 [wrapper] pandaids: 6893840229
[2025-11-23 21:53:18] 2025-11-23 20:53:18,860 [wrapper] cleanup supervisor_pilot 3112869 3031641
[2025-11-23 21:53:18] 2025-11-23 20:53:18,862 [wrapper] Test setup, not cleaning
[2025-11-23 21:53:18] 2025-11-23 20:53:18,864 [wrapper] apfmon messages muted
[2025-11-23 21:53:18] 2025-11-23 20:53:18,866 [wrapper] ==== wrapper stdout END ====
[2025-11-23 21:53:18] 2025-11-23 20:53:18,868 [wrapper] ==== wrapper stderr END ====
[2025-11-23 21:53:18]  *** Error codes and diagnostics ***
[2025-11-23 21:53:18]     "exeErrorCode": 0,
[2025-11-23 21:53:18]     "exeErrorDiag": "",
[2025-11-23 21:53:18]     "pilotErrorCode": 0,
[2025-11-23 21:53:18]     "pilotErrorDiag": "",
[2025-11-23 21:53:18]  *** Listing of results directory ***
[2025-11-23 21:53:18] total 1326040
[2025-11-23 21:53:18] -rw-r--r-- 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-23 21:53:18] -rwx------ 1 boinc boinc     36292 Nov 20 11:20 runpilot2-wrapper.sh
[2025-11-23 21:53:18] -rw-r--r-- 1 boinc boinc      5112 Nov 20 11:21 queuedata.json
[2025-11-23 21:53:18] -rw-r--r-- 1 boinc boinc       100 Nov 23 09:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 21:53:18] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 09:19 run_atlas
[2025-11-23 21:53:18] -rw-r--r-- 1 boinc boinc       105 Nov 23 09:19 job.xml
[2025-11-23 21:53:18] -rw-r--r-- 2 boinc boinc 411839456 Nov 23 09:19 EVNT.47493127._000168.pool.root.1
[2025-11-23 21:53:18] -rw-r--r-- 2 boinc boinc    590101 Nov 23 09:19 input.tar.gz
[2025-11-23 21:53:18] -rw-r--r-- 2 boinc boinc     15847 Nov 23 09:19 start_atlas.sh
[2025-11-23 21:53:18] drwxrwx--x 2 boinc boinc      4096 Nov 23 09:19 shared
[2025-11-23 21:53:18] -rw-r--r-- 1 boinc boinc         0 Nov 23 09:19 boinc_setup_complete
[2025-11-23 21:53:18] -rw-r--r-- 1 boinc boinc      6206 Nov 23 09:19 init_data.xml
[2025-11-23 21:53:18] -rw-r--r-- 1 boinc boinc         0 Nov 23 09:19 boinc_lockfile
[2025-11-23 21:53:18] -rw-r--r-- 1 boinc boinc      2786 Nov 23 09:19 pandaJob.out
[2025-11-23 21:53:18] -rw------- 1 boinc boinc    989784 Nov 23 09:19 agis_schedconf.cvmfs.json
[2025-11-23 21:53:18] drwx------ 5 boinc boinc      4096 Nov 23 09:19 pilot3
[2025-11-23 21:53:18] -rw-r--r-- 1 boinc boinc       531 Nov 23 21:48 boinc_task_state.xml
[2025-11-23 21:53:18] -rw------- 1 boinc boinc 926964292 Nov 23 21:52 HITS.47523449._001675.pool.root.1
[2025-11-23 21:53:18] -rw------- 1 boinc boinc      1034 Nov 23 21:52 memory_monitor_summary.json
[2025-11-23 21:53:18] -rw------- 1 boinc boinc   1526164 Nov 23 21:52 agis_ddmendpoints.agis.ALL.json
[2025-11-23 21:53:18] -rw------- 1 boinc boinc   1244039 Nov 23 21:52 log.47523449._001675.job.log.tgz.1
[2025-11-23 21:53:18] -rw------- 1 boinc boinc      8562 Nov 23 21:52 heartbeat.json
[2025-11-23 21:53:18] -rw-r--r-- 1 boinc boinc        28 Nov 23 21:52 wrapper_checkpoint.txt
[2025-11-23 21:53:18] -rw-r--r-- 1 boinc boinc      8192 Nov 23 21:52 boinc_mmap_file
[2025-11-23 21:53:18] -rw------- 1 boinc boinc       747 Nov 23 21:53 pilotlog.txt
[2025-11-23 21:53:18] -rw------- 1 boinc boinc        95 Nov 23 21:53 pilot_heartbeat.json
[2025-11-23 21:53:18] -rw------- 1 boinc boinc   6334589 Nov 23 21:53 log.47523449._001675.job.log.1
[2025-11-23 21:53:18] -rw------- 1 boinc boinc       353 Nov 23 21:53 output.list
[2025-11-23 21:53:18] -rw-r--r-- 1 boinc boinc       620 Nov 23 21:53 runtime_log
[2025-11-23 21:53:18] -rw------- 1 boinc boinc   7598080 Nov 23 21:53 result.tar.gz
[2025-11-23 21:53:18] -rw------- 1 boinc boinc       665 Nov 23 21:53 s4cNDmrwGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmoMHKDmErnbUm.diag
[2025-11-23 21:53:18] -rw-r--r-- 1 boinc boinc      8898 Nov 23 21:53 runtime_log.err
[2025-11-23 21:53:18] -rw-r--r-- 1 boinc boinc      8624 Nov 23 21:53 stderr.txt
[2025-11-23 21:53:18] HITS file was successfully produced:
[2025-11-23 21:53:18] -rw------- 1 boinc boinc 926964292 Nov 23 21:52 shared/HITS.pool.root.1
[2025-11-23 21:53:18]  *** Contents of shared directory: ***
[2025-11-23 21:53:18] total 1315452
[2025-11-23 21:53:18] -rw-r--r-- 2 boinc boinc 411839456 Nov 23 09:19 ATLAS.root_0
[2025-11-23 21:53:18] -rw-r--r-- 2 boinc boinc    590101 Nov 23 09:19 input.tar.gz
[2025-11-23 21:53:18] -rw-r--r-- 2 boinc boinc     15847 Nov 23 09:19 start_atlas.sh
[2025-11-23 21:53:18] -rw------- 1 boinc boinc 926964292 Nov 23 21:52 HITS.pool.root.1
[2025-11-23 21:53:18] -rw------- 1 boinc boinc   7598080 Nov 23 21:53 result.tar.gz
21:53:41 (3027931): run_atlas exited; CPU time 89561.687193
21:53:41 (3027931): called boinc_finish(0)

</stderr_txt>
]]>

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