Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:54:39 (21378): wrapper (7.7.26015): starting
23:54:39 (21378): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 23:54:39] Arguments: --nthreads 8
[2025-11-22 23:54:39] Threads: 8
[2025-11-22 23:54:39] Checking for CVMFS
[2025-11-22 23:54:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 23:54:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 23:54:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 23:54:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 23:54:42] 2.11.2.0 25379 280186 135544 153187 0 180 23409819 25165825 4632 130560 3 140781868 99.888 79211615 3067 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-22 23:54:42] CVMFS is ok
[2025-11-22 23:54:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 23:54:42] Checking for apptainer binary...
[2025-11-22 23:54:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 23:54:42] Running /usr/bin/apptainer --version
[2025-11-22 23:54:43] apptainer version 1.3.2-1.el7
[2025-11-22 23:54:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 23:54:58] cg-vwn336.simple-grid.lan
[2025-11-22 23:54:58] apptainer works
[2025-11-22 23:54:58] Set ATHENA_PROC_NUMBER=8
[2025-11-22 23:54:58] Set ATHENA_CORE_NUMBER=8
[2025-11-22 23:54:59] Starting ATLAS job with PandaID=6893843635
[2025-11-22 23:54:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 02:04:48]  *** The last 200 lines of the pilot log: ***
[2025-11-24 02:04:48] 2025-11-24 01:03:34,528 | INFO     | time since job start (93881s) is within the limit (172800.0s)
[2025-11-24 02:04:48] 2025-11-24 01:03:36,543 | INFO     | time since job start (93883s) is within the limit (172800.0s)
[2025-11-24 02:04:48] 2025-11-24 01:03:36,576 | INFO     | monitor loop #6302: job 0:6893843635 is in state 'finished'
[2025-11-24 02:04:48] 2025-11-24 01:03:36,576 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 02:04:48] 2025-11-24 01:03:38,550 | INFO     | time since job start (93885s) is within the limit (172800.0s)
[2025-11-24 02:04:48] 2025-11-24 01:03:39,082 | INFO     | monitor loop #6303: job 0:6893843635 is in state 'finished'
[2025-11-24 02:04:48] 2025-11-24 01:03:39,082 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 02:04:48] 2025-11-24 01:03:40,557 | INFO     | time since job start (93887s) is within the limit (172800.0s)
[2025-11-24 02:04:48] 2025-11-24 01:03:41,594 | INFO     | monitor loop #6304: job 0:6893843635 is in state 'finished'
[2025-11-24 02:04:48] 2025-11-24 01:03:41,594 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 02:04:48] 2025-11-24 01:03:41,804 | INFO     | PID=25180 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 02:04:48] 2025-11-24 01:03:41,804 | INFO     | .. there are 9 such processes running
[2025-11-24 02:04:48] 2025-11-24 01:03:42,813 | INFO     | time since job start (93889s) is within the limit (172800.0s)
[2025-11-24 02:04:48] 2025-11-24 01:03:43,909 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 02:04:48] 2025-11-24 01:03:43,910 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-24 02:04:48] 2025-11-24 01:03:43,912 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6893843635/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 02:04:48] 2025-11-24 01:03:43,913 | INFO     | extracted standard info from prmon json
[2025-11-24 02:04:48] 2025-11-24 01:03:43,913 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 02:04:48] 2025-11-24 01:03:43,913 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 02:04:48] 2025-11-24 01:03:43,950 | INFO     | fitting pss+swap vs Time
[2025-11-24 02:04:48] 2025-11-24 01:03:43,952 | INFO     | sum of square deviations: 1108410108131.6829
[2025-11-24 02:04:48] 2025-11-24 01:03:44,028 | INFO     | sum of deviations: 3021591004013.272
[2025-11-24 02:04:48] 2025-11-24 01:03:44,028 | INFO     | mean x: 1763899458.3145847
[2025-11-24 02:04:48] 2025-11-24 01:03:44,028 | INFO     | mean y: 2837783.207325049
[2025-11-24 02:04:48] 2025-11-24 01:03:44,029 | INFO     | intersect: -4805655658.097557
[2025-11-24 02:04:48] 2025-11-24 01:03:44,031 | INFO     | chi2: 29.54488778453102
[2025-11-24 02:04:48] 2025-11-24 01:03:44,033 | INFO     | sum of square deviations: 1097572359818.0162
[2025-11-24 02:04:48] 2025-11-24 01:03:44,101 | INFO     | sum of deviations: 3517486798795.487
[2025-11-24 02:04:48] 2025-11-24 01:03:44,102 | INFO     | mean x: 1763899305.8188977
[2025-11-24 02:04:48] 2025-11-24 01:03:44,102 | INFO     | mean y: 2844759.8858267716
[2025-11-24 02:04:48] 2025-11-24 01:03:44,102 | INFO     | intersect: -5650078682.584277
[2025-11-24 02:04:48] 2025-11-24 01:03:44,104 | INFO     | chi2: 26.3748973410854
[2025-11-24 02:04:48] 2025-11-24 01:03:44,104 | INFO     | current chi2=26.3748973410854 (change=10.729404242670197 %)
[2025-11-24 02:04:48] 2025-11-24 01:03:44,104 | INFO     | right removable region: 1523
[2025-11-24 02:04:48] 2025-11-24 01:03:44,106 | INFO     | sum of square deviations: 1097571133718.0144
[2025-11-24 02:04:48] 2025-11-24 01:03:44,129 | INFO     | monitor loop #6305: job 0:6893843635 is in state 'finished'
[2025-11-24 02:04:48] 2025-11-24 01:03:44,129 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 02:04:48] 2025-11-24 01:03:44,172 | INFO     | sum of deviations: 2371081991753.4395
[2025-11-24 02:04:48] 2025-11-24 01:03:44,172 | INFO     | mean x: 1763899610.8188977
[2025-11-24 02:04:48] 2025-11-24 01:03:44,172 | INFO     | mean y: 2846935.5196850393
[2025-11-24 02:04:48] 2025-11-24 01:03:44,172 | INFO     | intersect: -3807703901.678361
[2025-11-24 02:04:48] 2025-11-24 01:03:44,174 | INFO     | chi2: 24.72126860396287
[2025-11-24 02:04:48] 2025-11-24 01:03:44,174 | INFO     | current chi2=24.72126860396287 (change=16.326408872311507 %)
[2025-11-24 02:04:48] 2025-11-24 01:03:44,175 | INFO     | left removable region: 10
[2025-11-24 02:04:48] 2025-11-24 01:03:44,177 | INFO     | sum of square deviations: 1073976049255.7424
[2025-11-24 02:04:48] 2025-11-24 01:03:44,234 | INFO     | sum of deviations: 2394817754307.7603
[2025-11-24 02:04:48] 2025-11-24 01:03:44,235 | INFO     | mean x: 1763899580.3284864
[2025-11-24 02:04:48] 2025-11-24 01:03:44,235 | INFO     | mean y: 2863798.2399206874
[2025-11-24 02:04:48] 2025-11-24 01:03:44,235 | INFO     | intersect: -3930387818.2314324
[2025-11-24 02:04:48] 2025-11-24 01:03:44,237 | INFO     | chi2: 17.02485789730509
[2025-11-24 02:04:48] 2025-11-24 01:03:44,237 | INFO     | current memory leak: 2.23 B/s (using 1513 data points, chi2=17.02)
[2025-11-24 02:04:48] 2025-11-24 01:03:44,240 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-24 02:04:48] 2025-11-24 01:03:44,241 | INFO     | ..............................
[2025-11-24 02:04:48] 2025-11-24 01:03:44,241 | INFO     | . Timing measurements:
[2025-11-24 02:04:48] 2025-11-24 01:03:44,241 | INFO     | . get job = 0 s
[2025-11-24 02:04:48] 2025-11-24 01:03:44,241 | INFO     | . initial setup = 9 s
[2025-11-24 02:04:48] 2025-11-24 01:03:44,241 | INFO     | . payload setup = 170 s
[2025-11-24 02:04:48] 2025-11-24 01:03:44,241 | INFO     | . stage-in = 0 s
[2025-11-24 02:04:48] 2025-11-24 01:03:44,241 | INFO     | . payload execution = 93422 s
[2025-11-24 02:04:48] 2025-11-24 01:03:44,241 | INFO     | . stage-out = 7 s
[2025-11-24 02:04:48] 2025-11-24 01:03:44,241 | INFO     | . log creation = 2 s
[2025-11-24 02:04:48] 2025-11-24 01:03:44,242 | INFO     | ..............................
[2025-11-24 02:04:48] 2025-11-24 01:03:44,764 | INFO     | 
[2025-11-24 02:04:48] 2025-11-24 01:03:44,764 | INFO     | job summary report
[2025-11-24 02:04:48] 2025-11-24 01:03:44,764 | INFO     | --------------------------------------------------
[2025-11-24 02:04:48] 2025-11-24 01:03:44,764 | INFO     | PanDA job id: 6893843635
[2025-11-24 02:04:48] 2025-11-24 01:03:44,765 | INFO     | task id: 47523449
[2025-11-24 02:04:48] 2025-11-24 01:03:44,765 | INFO     | errors: (none)
[2025-11-24 02:04:48] 2025-11-24 01:03:44,765 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 02:04:48] 2025-11-24 01:03:44,765 | INFO     | pilot state: finished 
[2025-11-24 02:04:48] 2025-11-24 01:03:44,765 | INFO     | transexitcode: 0
[2025-11-24 02:04:48] 2025-11-24 01:03:44,765 | INFO     | exeerrorcode: 0
[2025-11-24 02:04:48] 2025-11-24 01:03:44,765 | INFO     | exeerrordiag: 
[2025-11-24 02:04:48] 2025-11-24 01:03:44,765 | INFO     | exitcode: 0
[2025-11-24 02:04:48] 2025-11-24 01:03:44,765 | INFO     | exitmsg: OK
[2025-11-24 02:04:48] 2025-11-24 01:03:44,765 | INFO     | cpuconsumptiontime: 345518 s
[2025-11-24 02:04:48] 2025-11-24 01:03:44,765 | INFO     | nevents: 1000
[2025-11-24 02:04:48] 2025-11-24 01:03:44,766 | INFO     | neventsw: 0
[2025-11-24 02:04:48] 2025-11-24 01:03:44,766 | INFO     | pid: 31771
[2025-11-24 02:04:48] 2025-11-24 01:03:44,766 | INFO     | pgrp: 31771
[2025-11-24 02:04:48] 2025-11-24 01:03:44,766 | INFO     | corecount: 8
[2025-11-24 02:04:48] 2025-11-24 01:03:44,766 | INFO     | event service: False
[2025-11-24 02:04:48] 2025-11-24 01:03:44,766 | INFO     | sizes: {0: 2298580, 1: 2298835, 2: 2298835, 12: 2298863, 23: 2298891, 34: 2298919, 44: 2299075, 55: 2299103, 66: 2299131, 77: 2299159, 87: 2299215, 90: 2299785, 98
[2025-11-24 02:04:48] 2025-11-24 01:03:44,766 | INFO     | --------------------------------------------------
[2025-11-24 02:04:48] 2025-11-24 01:03:44,766 | INFO     | 
[2025-11-24 02:04:48] 2025-11-24 01:03:44,767 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-11-24 02:04:48] 2025-11-24 01:03:44,820 | INFO     | time since job start (93891s) is within the limit (172800.0s)
[2025-11-24 02:04:48] 2025-11-24 01:03:45,235 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 02:04:48] 2025-11-24 01:03:45,236 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 02:04:48] 2025-11-24 01:03:45,236 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 02:04:48] 2025-11-24 01:03:45,236 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 02:04:48] 2025-11-24 01:03:45,236 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 02:04:48] 2025-11-24 01:03:45,236 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 02:04:48] 2025-11-24 01:03:45,236 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 02:04:48] 2025-11-24 01:03:45,236 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 02:04:48] 2025-11-24 01:03:45,236 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 02:04:48] 2025-11-24 01:03:45,236 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 02:04:48] 2025-11-24 01:03:45,236 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 02:04:48] 2025-11-24 01:03:45,237 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 02:04:48] 2025-11-24 01:03:45,237 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 02:04:48] 2025-11-24 01:03:45,237 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 02:04:48] 2025-11-24 01:03:45,237 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 02:04:48] 2025-11-24 01:03:45,237 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 02:04:48] 2025-11-24 01:03:45,237 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 02:04:48] 2025-11-24 01:03:45,237 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 02:04:48] 2025-11-24 01:03:45,237 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 02:04:48] 2025-11-24 01:03:45,237 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 02:04:48] 2025-11-24 01:03:45,238 | INFO     | job 6893843635 has completed (purged errors)
[2025-11-24 02:04:48] 2025-11-24 01:03:45,238 | INFO     | overall cleanup function is called
[2025-11-24 02:04:48] 2025-11-24 01:03:46,264 | INFO     | --- collectZombieJob: --- 10, [31771]
[2025-11-24 02:04:48] 2025-11-24 01:03:46,264 | INFO     | zombie collector waiting for pid 31771
[2025-11-24 02:04:48] 2025-11-24 01:03:46,265 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 02:04:48] 2025-11-24 01:03:46,265 | INFO     | collected zombie processes
[2025-11-24 02:04:48] 2025-11-24 01:03:46,265 | INFO     | will attempt to kill all subprocesses of pid=31771
[2025-11-24 02:04:48] 2025-11-24 01:03:46,379 | INFO     | process IDs to be killed: [31771] (in reverse order)
[2025-11-24 02:04:48] 2025-11-24 01:03:47,193 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 02:04:48] 2025-11-24 01:03:47,193 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 02:04:48] 2025-11-24 01:03:47,197 | INFO     | did not find any defunct processes belonging to 31771
[2025-11-24 02:04:48] 2025-11-24 01:03:47,203 | INFO     | did not find any defunct processes belonging to 31771
[2025-11-24 02:04:48] 2025-11-24 01:03:47,229 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 02:04:48] 2025-11-24 01:03:47,230 | INFO     | ready for new job
[2025-11-24 02:04:48] 2025-11-24 01:03:47,230 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 02:04:48] 2025-11-24 01:03:47,237 | INFO     | ***************************************
[2025-11-24 02:04:48] 2025-11-24 01:03:47,238 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 02:04:48] 2025-11-24 01:03:47,238 | INFO     | ***************************************
[2025-11-24 02:04:48] 2025-11-24 01:03:47,238 | INFO     | 
[2025-11-24 02:04:48] 2025-11-24 01:03:47,239 | INFO     | pilot is running in a VM
[2025-11-24 02:04:48] 2025-11-24 01:03:47,239 | INFO     | architecture information:
[2025-11-24 02:04:48] 2025-11-24 01:03:47,242 | INFO     | executing command: cat /etc/os-release
[2025-11-24 02:04:48] 2025-11-24 01:03:47,399 | INFO     | cat /etc/os-release:
[2025-11-24 02:04:48] NAME="CentOS Linux"
[2025-11-24 02:04:48] VERSION="7 (Core)"
[2025-11-24 02:04:48] ID="centos"
[2025-11-24 02:04:48] ID_LIKE="rhel fedora"
[2025-11-24 02:04:48] VERSION_ID="7"
[2025-11-24 02:04:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 02:04:48] ANSI_COLOR="0;31"
[2025-11-24 02:04:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 02:04:48] HOME_URL="https://www.centos.org/"
[2025-11-24 02:04:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 02:04:48] 
[2025-11-24 02:04:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 02:04:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 02:04:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 02:04:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 02:04:48] 
[2025-11-24 02:04:48] 2025-11-24 01:03:47,399 | INFO     | ***************************************
[2025-11-24 02:04:48] 2025-11-24 01:03:47,903 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-11-24 02:04:48] 2025-11-24 01:03:48,184 | INFO     | sufficient remaining disk space (495006515200 B)
[2025-11-24 02:04:48] 2025-11-24 01:03:48,184 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 02:04:48] 2025-11-24 01:03:48,184 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 02:04:48] 2025-11-24 01:03:48,185 | INFO     | update_server=False
[2025-11-24 02:04:48] 2025-11-24 01:03:48,185 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 02:04:48] 2025-11-24 01:03:48,186 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 02:04:48] 2025-11-24 01:03:48,194 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 02:04:48] 2025-11-24 01:03:48,194 | INFO     | aborting loop
[2025-11-24 02:04:48] 2025-11-24 01:03:48,216 | INFO     | all payload control threads have been joined
[2025-11-24 02:04:48] 2025-11-24 01:03:48,504 | INFO     | all data control threads have been joined
[2025-11-24 02:04:48] 2025-11-24 01:03:48,520 | INFO     | all job control threads have been joined
[2025-11-24 02:04:48] 2025-11-24 01:03:49,191 | INFO     | [job] retrieve thread has finished
[2025-11-24 02:04:48] 2025-11-24 01:03:49,200 | INFO     | [job] job monitor thread has finished
[2025-11-24 02:04:48] 2025-11-24 01:03:49,222 | INFO     | [payload] control thread has finished
[2025-11-24 02:04:48] 2025-11-24 01:03:49,323 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 02:04:48] 2025-11-24 01:03:49,341 | INFO     | [data] copytool_in thread has finished
[2025-11-24 02:04:48] 2025-11-24 01:03:49,410 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 02:04:48] 2025-11-24 01:03:49,510 | INFO     | [data] control thread has finished
[2025-11-24 02:04:48] 2025-11-24 01:03:49,526 | INFO     | [job] control thread has finished
[2025-11-24 02:04:48] 2025-11-24 01:03:49,537 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 02:04:48] 2025-11-24 01:03:49,975 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 02:04:48] 2025-11-24 01:03:50,047 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 02:04:48] 2025-11-24 01:03:50,193 | INFO     | [data] copytool_out thread has finished
[2025-11-24 02:04:48] 2025-11-24 01:03:50,219 | INFO     | [payload] validate_post thread has finished
[2025-11-24 02:04:48] 2025-11-24 01:03:50,239 | INFO     | [payload] failed_post thread has finished
[2025-11-24 02:04:48] 2025-11-24 01:03:50,416 | INFO     | [job] queue monitor thread has finished
[2025-11-24 02:04:48] 2025-11-24 01:03:50,500 | INFO     | [job] validate thread has finished
[2025-11-24 02:04:48] 2025-11-24 01:03:50,684 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 02:04:48] 2025-11-24 01:03:53,984 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 02:04:48] 2025-11-24 01:04:18,048 | INFO     | PID=25180 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 02:04:48] 2025-11-24 01:04:18,048 | INFO     | .. there are 9 such processes running
[2025-11-24 02:04:48] 2025-11-24 01:04:18,048 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 02:04:48] 2025-11-24 01:04:18,048 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 02:04:48] 2025-11-24 01:04:18,049 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 02:04:48] 2025-11-24 01:04:36,937 | INFO     | [monitor] cgroup control has ended
[2025-11-24 02:04:48] 2025-11-24 01:04:37,236 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139747310716736)>', '<ExcThread(monitor, started 139746844055296)>']
[2025-11-24 02:04:48] 2025-11-24 01:04:38,169 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 02:04:48] 2025-11-24 01:04:38,169 | INFO     | [monitor] control thread has ended
[2025-11-24 02:04:48] 2025-11-24 01:04:42,262 | INFO     | all workflow threads have been joined
[2025-11-24 02:04:48] 2025-11-24 01:04:42,262 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 02:04:48] 2025-11-24 01:04:42,262 | INFO     | traces error code: 0
[2025-11-24 02:04:48] 2025-11-24 01:04:42,263 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 02:04:48] 2025-11-24 01:04:42,750 [wrapper] ==== pilot stdout END ====
[2025-11-24 02:04:48] 2025-11-24 01:04:42,804 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 02:04:48] 2025-11-24 01:04:42,903 [wrapper] pilotpid: 25180
[2025-11-24 02:04:48] 2025-11-24 01:04:42,998 [wrapper] Pilot exit status: 0
[2025-11-24 02:04:48] 2025-11-24 01:04:43,499 [wrapper] pandaids: 6893843635
[2025-11-24 02:04:48] 2025-11-24 01:04:44,670 [wrapper] cleanup supervisor_pilot 26309 25181
[2025-11-24 02:04:48] 2025-11-24 01:04:44,762 [wrapper] Test setup, not cleaning
[2025-11-24 02:04:48] 2025-11-24 01:04:44,832 [wrapper] apfmon messages muted
[2025-11-24 02:04:48] 2025-11-24 01:04:44,939 [wrapper] ==== wrapper stdout END ====
[2025-11-24 02:04:48] 2025-11-24 01:04:45,040 [wrapper] ==== wrapper stderr END ====
[2025-11-24 02:04:48]  *** Error codes and diagnostics ***
[2025-11-24 02:04:48]     "exeErrorCode": 0,
[2025-11-24 02:04:48]     "exeErrorDiag": "",
[2025-11-24 02:04:48]     "pilotErrorCode": 0,
[2025-11-24 02:04:48]     "pilotErrorDiag": "",
[2025-11-24 02:04:48]  *** Listing of results directory ***
[2025-11-24 02:04:48] total 1349556
[2025-11-24 02:04:48] -rw-r--r--. 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-24 02:04:48] -rwx------. 1 boinc boinc     36292 Nov 20 11:22 runpilot2-wrapper.sh
[2025-11-24 02:04:48] -rw-r--r--. 1 boinc boinc      5112 Nov 20 11:23 queuedata.json
[2025-11-24 02:04:48] -rw-r--r--. 1 boinc boinc       100 Nov 22 23:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 02:04:48] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 23:54 run_atlas
[2025-11-24 02:04:48] -rw-r--r--. 1 boinc boinc       105 Nov 22 23:54 job.xml
[2025-11-24 02:04:48] -rw-r--r--. 2 boinc boinc 412291882 Nov 22 23:54 EVNT.47493127._000205.pool.root.1
[2025-11-24 02:04:48] -rw-r--r--. 1 boinc boinc      6391 Nov 22 23:54 init_data.xml
[2025-11-24 02:04:48] -rw-r--r--. 2 boinc boinc     15847 Nov 22 23:54 start_atlas.sh
[2025-11-24 02:04:48] drwxrwx--x. 2 boinc boinc        68 Nov 22 23:54 shared
[2025-11-24 02:04:48] -rw-r--r--. 2 boinc boinc    590105 Nov 22 23:54 input.tar.gz
[2025-11-24 02:04:48] -rw-r--r--. 1 boinc boinc         0 Nov 22 23:54 boinc_lockfile
[2025-11-24 02:04:48] -rw-r--r--. 1 boinc boinc      2786 Nov 22 23:54 pandaJob.out
[2025-11-24 02:04:48] -rw-------. 1 boinc boinc    989784 Nov 22 23:58 agis_schedconf.cvmfs.json
[2025-11-24 02:04:48] drwx------. 5 boinc boinc      4096 Nov 22 23:58 pilot3
[2025-11-24 02:04:48] -rw-r--r--. 1 boinc boinc       533 Nov 24 01:31 boinc_task_state.xml
[2025-11-24 02:04:48] -rw-------. 1 boinc boinc 935537429 Nov 24 02:00 HITS.47523449._002047.pool.root.1
[2025-11-24 02:04:48] -rw-------. 1 boinc boinc      1031 Nov 24 02:01 memory_monitor_summary.json
[2025-11-24 02:04:48] -rw-------. 1 boinc boinc   1526164 Nov 24 02:02 agis_ddmendpoints.agis.ALL.json
[2025-11-24 02:04:48] -rw-------. 1 boinc boinc   2596417 Nov 24 02:02 log.47523449._002047.job.log.tgz.1
[2025-11-24 02:04:48] -rw-------. 1 boinc boinc        95 Nov 24 02:03 pilot_heartbeat.json
[2025-11-24 02:04:48] -rw-------. 1 boinc boinc      8627 Nov 24 02:03 heartbeat.json
[2025-11-24 02:04:48] -rw-r--r--. 1 boinc boinc        29 Nov 24 02:04 wrapper_checkpoint.txt
[2025-11-24 02:04:48] -rw-r--r--. 1 boinc boinc      8192 Nov 24 02:04 boinc_mmap_file
[2025-11-24 02:04:48] -rw-------. 1 boinc boinc      4884 Nov 24 02:04 pilotlog.txt
[2025-11-24 02:04:48] -rw-------. 1 boinc boinc  12503265 Nov 24 02:04 log.47523449._002047.job.log.1
[2025-11-24 02:04:48] -rw-------. 1 boinc boinc       353 Nov 24 02:04 output.list
[2025-11-24 02:04:48] -rw-r--r--. 1 boinc boinc       620 Nov 24 02:04 runtime_log
[2025-11-24 02:04:48] -rw-------. 1 boinc boinc  15124480 Nov 24 02:04 result.tar.gz
[2025-11-24 02:04:48] -rw-------. 1 boinc boinc       662 Nov 24 02:04 djcMDmqyGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmoRGKDmu3q3xn.diag
[2025-11-24 02:04:48] -rw-r--r--. 1 boinc boinc      8817 Nov 24 02:04 runtime_log.err
[2025-11-24 02:04:48] -rw-r--r--. 1 boinc boinc     21506 Nov 24 02:04 stderr.txt
[2025-11-24 02:04:48] HITS file was successfully produced:
[2025-11-24 02:04:48] -rw-------. 1 boinc boinc 935537429 Nov 24 02:00 shared/HITS.pool.root.1
[2025-11-24 02:04:48]  *** Contents of shared directory: ***
[2025-11-24 02:04:48] total 1331612
[2025-11-24 02:04:48] -rw-r--r--. 2 boinc boinc 412291882 Nov 22 23:54 ATLAS.root_0
[2025-11-24 02:04:48] -rw-r--r--. 2 boinc boinc     15847 Nov 22 23:54 start_atlas.sh
[2025-11-24 02:04:48] -rw-r--r--. 2 boinc boinc    590105 Nov 22 23:54 input.tar.gz
[2025-11-24 02:04:48] -rw-------. 1 boinc boinc 935537429 Nov 24 02:00 HITS.pool.root.1
[2025-11-24 02:04:48] -rw-------. 1 boinc boinc  15124480 Nov 24 02:04 result.tar.gz
02:04:49 (21378): run_atlas exited; CPU time 346041.946746
02:04:49 (21378): called boinc_finish(0)

</stderr_txt>
]]>

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