Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:31:52 (2675934): wrapper (7.7.26015): starting
08:31:52 (2675934): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 08:31:52] Arguments: --nthreads 8
[2025-11-20 08:31:52] Threads: 8
[2025-11-20 08:31:52] Checking for CVMFS
[2025-11-20 08:31:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 08:31:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 08:31:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 08:31:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 08:31:53] 2.13.2.0 7533 22984 238304 153083 0 323 32906690 39288832 8604 16776704 0 11677071 99.618 13073446 35079 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 08:31:53] CVMFS is ok
[2025-11-20 08:31:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 08:31:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 08:31:53] Further information can be found at the LHC@home message board.
[2025-11-20 08:31:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 08:31:53] Checking for apptainer binary...
[2025-11-20 08:31:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 08:31:53] Running /usr/bin/apptainer --version
[2025-11-20 08:31:53] apptainer version 1.4.4-1.el9
[2025-11-20 08:31:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 08:31:54] c-211-31.aglt2.org
[2025-11-20 08:31:54] apptainer works
[2025-11-20 08:31:54] Set ATHENA_PROC_NUMBER=8
[2025-11-20 08:31:54] Set ATHENA_CORE_NUMBER=8
[2025-11-20 08:31:54] Starting ATLAS job with PandaID=6893842488
[2025-11-20 08:31:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 10:21:28]  *** The last 200 lines of the pilot log: ***
[2025-11-21 10:21:28] 2025-11-21 15:20:25,769 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 10:21:28] 2025-11-21 15:20:26,817 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-21 10:21:28] 2025-11-21 15:20:26,826 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2899.9874749999994
[2025-11-21 10:21:28] 2025-11-21 15:20:26,834 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6893842488/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 10:21:28] 2025-11-21 15:20:26,835 | INFO     | extracted standard info from prmon json
[2025-11-21 10:21:28] 2025-11-21 15:20:26,835 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 10:21:28] 2025-11-21 15:20:26,835 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 10:21:28] 2025-11-21 15:20:26,866 | INFO     | fitting pss+swap vs Time
[2025-11-21 10:21:28] 2025-11-21 15:20:26,868 | INFO     | sum of square deviations: 1091077704378.0
[2025-11-21 10:21:28] 2025-11-21 15:20:26,923 | INFO     | sum of deviations: 5687376957735.999
[2025-11-21 10:21:28] 2025-11-21 15:20:26,924 | INFO     | mean x: 1763692016.0
[2025-11-21 10:21:28] 2025-11-21 15:20:26,924 | INFO     | mean y: 2940306.2024983563
[2025-11-21 10:21:28] 2025-11-21 15:20:26,924 | INFO     | intersect: -9190521618.729498
[2025-11-21 10:21:28] 2025-11-21 15:20:26,926 | INFO     | chi2: 7.143445701448422
[2025-11-21 10:21:28] 2025-11-21 15:20:26,927 | INFO     | sum of square deviations: 1080353111372.9833
[2025-11-21 10:21:28] 2025-11-21 15:20:26,980 | INFO     | sum of deviations: 6117752022351.575
[2025-11-21 10:21:28] 2025-11-21 15:20:26,980 | INFO     | mean x: 1763691863.503298
[2025-11-21 10:21:28] 2025-11-21 15:20:26,981 | INFO     | mean y: 2946424.084432718
[2025-11-21 10:21:28] 2025-11-21 15:20:26,981 | INFO     | intersect: -9984371010.5272
[2025-11-21 10:21:28] 2025-11-21 15:20:26,982 | INFO     | chi2: 4.844598876631571
[2025-11-21 10:21:28] 2025-11-21 15:20:26,983 | INFO     | current chi2=4.844598876631571 (change=32.18120387407342 %)
[2025-11-21 10:21:28] 2025-11-21 15:20:26,984 | INFO     | sum of square deviations: 1069699031317.9337
[2025-11-21 10:21:28] 2025-11-21 15:20:27,010 | INFO     | time since job start (92866s) is within the limit (172800.0s)
[2025-11-21 10:21:28] 2025-11-21 15:20:27,038 | INFO     | sum of deviations: 6233591494591.985
[2025-11-21 10:21:28] 2025-11-21 15:20:27,038 | INFO     | mean x: 1763691711.006618
[2025-11-21 10:21:28] 2025-11-21 15:20:27,038 | INFO     | mean y: 2948080.2025148906
[2025-11-21 10:21:28] 2025-11-21 15:20:27,038 | INFO     | intersect: -10274834106.126854
[2025-11-21 10:21:28] 2025-11-21 15:20:27,040 | INFO     | chi2: 4.5133581197904995
[2025-11-21 10:21:28] 2025-11-21 15:20:27,040 | INFO     | current chi2=4.5133581197904995 (change=6.837320597146777 %)
[2025-11-21 10:21:28] 2025-11-21 15:20:27,040 | INFO     | right removable region: 1510
[2025-11-21 10:21:28] 2025-11-21 15:20:27,042 | INFO     | sum of square deviations: 1080352183562.9844
[2025-11-21 10:21:28] 2025-11-21 15:20:27,098 | INFO     | sum of deviations: 5104885790150.755
[2025-11-21 10:21:28] 2025-11-21 15:20:27,098 | INFO     | mean x: 1763692168.503298
[2025-11-21 10:21:28] 2025-11-21 15:20:27,098 | INFO     | mean y: 2948587.0501319263
[2025-11-21 10:21:28] 2025-11-21 15:20:27,098 | INFO     | intersect: -8330858875.160415
[2025-11-21 10:21:28] 2025-11-21 15:20:27,100 | INFO     | chi2: 3.5363146433231356
[2025-11-21 10:21:28] 2025-11-21 15:20:27,100 | INFO     | current chi2=3.5363146433231356 (change=50.49567406096327 %)
[2025-11-21 10:21:28] 2025-11-21 15:20:27,102 | INFO     | sum of square deviations: 1069697822534.9971
[2025-11-21 10:21:28] 2025-11-21 15:20:27,164 | INFO     | sum of deviations: 4876813822256.219
[2025-11-21 10:21:28] 2025-11-21 15:20:27,164 | INFO     | mean x: 1763692321.0019855
[2025-11-21 10:21:28] 2025-11-21 15:20:27,164 | INFO     | mean y: 2951848.256783587
[2025-11-21 10:21:28] 2025-11-21 15:20:27,164 | INFO     | intersect: -8037822759.366793
[2025-11-21 10:21:28] 2025-11-21 15:20:27,166 | INFO     | chi2: 2.9318667526318305
[2025-11-21 10:21:28] 2025-11-21 15:20:27,166 | INFO     | current chi2=2.9318667526318305 (change=17.092593608223027 %)
[2025-11-21 10:21:28] 2025-11-21 15:20:27,167 | INFO     | left removable region: 20
[2025-11-21 10:21:28] 2025-11-21 15:20:27,168 | INFO     | sum of square deviations: 1025714772268.4196
[2025-11-21 10:21:28] 2025-11-21 15:20:27,224 | INFO     | sum of deviations: 5233645236515.377
[2025-11-21 10:21:28] 2025-11-21 15:20:27,225 | INFO     | mean x: 1763692290.5073826
[2025-11-21 10:21:28] 2025-11-21 15:20:27,225 | INFO     | mean y: 2962324.420134228
[2025-11-21 10:21:28] 2025-11-21 15:20:27,225 | INFO     | intersect: -8996166872.558336
[2025-11-21 10:21:28] 2025-11-21 15:20:27,227 | INFO     | chi2: 0.24318187210043865
[2025-11-21 10:21:28] 2025-11-21 15:20:27,227 | INFO     | current memory leak: 5.10 B/s (using 1490 data points, chi2=0.24)
[2025-11-21 10:21:28] 2025-11-21 15:20:27,229 | INFO     | could have reported an average CPU frequency of 2899 MHz (54 samples)
[2025-11-21 10:21:28] 2025-11-21 15:20:27,229 | INFO     | ..............................
[2025-11-21 10:21:28] 2025-11-21 15:20:27,229 | INFO     | . Timing measurements:
[2025-11-21 10:21:28] 2025-11-21 15:20:27,229 | INFO     | . get job = 0 s
[2025-11-21 10:21:28] 2025-11-21 15:20:27,229 | INFO     | . initial setup = 5 s
[2025-11-21 10:21:28] 2025-11-21 15:20:27,229 | INFO     | . payload setup = 28 s
[2025-11-21 10:21:28] 2025-11-21 15:20:27,230 | INFO     | . stage-in = 0 s
[2025-11-21 10:21:28] 2025-11-21 15:20:27,230 | INFO     | . payload execution = 92773 s
[2025-11-21 10:21:28] 2025-11-21 15:20:27,230 | INFO     | . stage-out = 3 s
[2025-11-21 10:21:28] 2025-11-21 15:20:27,230 | INFO     | . log creation = 0 s
[2025-11-21 10:21:28] 2025-11-21 15:20:27,230 | INFO     | ..............................
[2025-11-21 10:21:28] 2025-11-21 15:20:27,353 | INFO     | 
[2025-11-21 10:21:28] 2025-11-21 15:20:27,353 | INFO     | job summary report
[2025-11-21 10:21:28] 2025-11-21 15:20:27,354 | INFO     | --------------------------------------------------
[2025-11-21 10:21:28] 2025-11-21 15:20:27,354 | INFO     | PanDA job id: 6893842488
[2025-11-21 10:21:28] 2025-11-21 15:20:27,354 | INFO     | task id: 47523449
[2025-11-21 10:21:28] 2025-11-21 15:20:27,354 | INFO     | errors: (none)
[2025-11-21 10:21:28] 2025-11-21 15:20:27,354 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 10:21:28] 2025-11-21 15:20:27,354 | INFO     | pilot state: finished 
[2025-11-21 10:21:28] 2025-11-21 15:20:27,354 | INFO     | transexitcode: 0
[2025-11-21 10:21:28] 2025-11-21 15:20:27,355 | INFO     | exeerrorcode: 0
[2025-11-21 10:21:28] 2025-11-21 15:20:27,355 | INFO     | exeerrordiag: 
[2025-11-21 10:21:28] 2025-11-21 15:20:27,355 | INFO     | exitcode: 0
[2025-11-21 10:21:28] 2025-11-21 15:20:27,355 | INFO     | exitmsg: OK
[2025-11-21 10:21:28] 2025-11-21 15:20:27,355 | INFO     | cpuconsumptiontime: 500565 s
[2025-11-21 10:21:28] 2025-11-21 15:20:27,355 | INFO     | nevents: 1000
[2025-11-21 10:21:28] 2025-11-21 15:20:27,356 | INFO     | neventsw: 0
[2025-11-21 10:21:28] 2025-11-21 15:20:27,356 | INFO     | pid: 2686528
[2025-11-21 10:21:28] 2025-11-21 15:20:27,356 | INFO     | pgrp: 2686528
[2025-11-21 10:21:28] 2025-11-21 15:20:27,356 | INFO     | corecount: 8
[2025-11-21 10:21:28] 2025-11-21 15:20:27,356 | INFO     | event service: False
[2025-11-21 10:21:28] 2025-11-21 15:20:27,356 | INFO     | sizes: {0: 2298580, 1: 2298664, 2: 2298863, 13: 2298863, 19: 2299181, 24: 2299209, 92806: 2369411, 92810: 2378405, 92813: 2378461, 92819: 2378707}
[2025-11-21 10:21:28] 2025-11-21 15:20:27,356 | INFO     | --------------------------------------------------
[2025-11-21 10:21:28] 2025-11-21 15:20:27,357 | INFO     | 
[2025-11-21 10:21:28] 2025-11-21 15:20:27,357 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-21 10:21:28] 2025-11-21 15:20:27,375 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 10:21:28] 2025-11-21 15:20:27,376 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 10:21:28] 2025-11-21 15:20:27,376 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 10:21:28] 2025-11-21 15:20:27,376 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 10:21:28] 2025-11-21 15:20:27,376 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 10:21:28] 2025-11-21 15:20:27,376 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 10:21:28] 2025-11-21 15:20:27,376 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 10:21:28] 2025-11-21 15:20:27,377 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 10:21:28] 2025-11-21 15:20:27,377 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 10:21:28] 2025-11-21 15:20:27,377 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 10:21:28] 2025-11-21 15:20:27,377 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 10:21:28] 2025-11-21 15:20:27,377 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 10:21:28] 2025-11-21 15:20:27,377 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 10:21:28] 2025-11-21 15:20:27,378 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 10:21:28] 2025-11-21 15:20:27,378 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 10:21:28] 2025-11-21 15:20:27,378 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 10:21:28] 2025-11-21 15:20:27,378 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 10:21:28] 2025-11-21 15:20:27,378 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 10:21:28] 2025-11-21 15:20:27,378 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 10:21:28] 2025-11-21 15:20:27,378 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 10:21:28] 2025-11-21 15:20:27,379 | INFO     | job 6893842488 has completed (purged errors)
[2025-11-21 10:21:28] 2025-11-21 15:20:27,379 | INFO     | overall cleanup function is called
[2025-11-21 10:21:28] 2025-11-21 15:20:28,397 | INFO     | --- collectZombieJob: --- 10, [2686528]
[2025-11-21 10:21:28] 2025-11-21 15:20:28,397 | INFO     | zombie collector waiting for pid 2686528
[2025-11-21 10:21:28] 2025-11-21 15:20:28,397 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 10:21:28] 2025-11-21 15:20:28,398 | INFO     | collected zombie processes
[2025-11-21 10:21:28] 2025-11-21 15:20:28,398 | INFO     | will attempt to kill all subprocesses of pid=2686528
[2025-11-21 10:21:28] 2025-11-21 15:20:28,705 | INFO     | process IDs to be killed: [2686528] (in reverse order)
[2025-11-21 10:21:28] 2025-11-21 15:20:28,775 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 10:21:28] 2025-11-21 15:20:28,776 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 10:21:28] 2025-11-21 15:20:28,784 | INFO     | did not find any defunct processes belonging to 2686528
[2025-11-21 10:21:28] 2025-11-21 15:20:28,791 | INFO     | did not find any defunct processes belonging to 2686528
[2025-11-21 10:21:28] 2025-11-21 15:20:28,792 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 10:21:28] 2025-11-21 15:20:28,792 | INFO     | ready for new job
[2025-11-21 10:21:28] 2025-11-21 15:20:28,793 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 10:21:28] 2025-11-21 15:20:28,799 | INFO     | ***************************************
[2025-11-21 10:21:28] 2025-11-21 15:20:28,800 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 10:21:28] 2025-11-21 15:20:28,800 | INFO     | ***************************************
[2025-11-21 10:21:28] 2025-11-21 15:20:28,800 | INFO     | 
[2025-11-21 10:21:28] 2025-11-21 15:20:28,802 | INFO     | architecture information:
[2025-11-21 10:21:28] 2025-11-21 15:20:28,802 | INFO     | executing command: cat /etc/os-release
[2025-11-21 10:21:28] 2025-11-21 15:20:28,815 | INFO     | cat /etc/os-release:
[2025-11-21 10:21:28] NAME="CentOS Linux"
[2025-11-21 10:21:28] VERSION="7 (Core)"
[2025-11-21 10:21:28] ID="centos"
[2025-11-21 10:21:28] ID_LIKE="rhel fedora"
[2025-11-21 10:21:28] VERSION_ID="7"
[2025-11-21 10:21:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 10:21:28] ANSI_COLOR="0;31"
[2025-11-21 10:21:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 10:21:28] HOME_URL="https://www.centos.org/"
[2025-11-21 10:21:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 10:21:28] 
[2025-11-21 10:21:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 10:21:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 10:21:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 10:21:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 10:21:28] 
[2025-11-21 10:21:28] 2025-11-21 15:20:28,815 | INFO     | ***************************************
[2025-11-21 10:21:28] 2025-11-21 15:20:29,318 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-21 10:21:28] 2025-11-21 15:20:29,333 | INFO     | sufficient remaining disk space (47969206272 B)
[2025-11-21 10:21:28] 2025-11-21 15:20:29,334 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 10:21:28] 2025-11-21 15:20:29,334 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 10:21:28] 2025-11-21 15:20:29,334 | INFO     | update_server=False
[2025-11-21 10:21:28] 2025-11-21 15:20:29,334 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 10:21:28] 2025-11-21 15:20:29,335 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 10:21:28] 2025-11-21 15:20:29,335 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 10:21:28] 2025-11-21 15:20:29,335 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 10:21:28] 2025-11-21 15:20:29,336 | INFO     | aborting loop
[2025-11-21 10:21:28] 2025-11-21 15:20:29,904 | INFO     | all data control threads have been joined
[2025-11-21 10:21:28] 2025-11-21 15:20:30,181 | INFO     | all payload control threads have been joined
[2025-11-21 10:21:28] 2025-11-21 15:20:30,207 | INFO     | all job control threads have been joined
[2025-11-21 10:21:28] 2025-11-21 15:20:30,340 | INFO     | [job] retrieve thread has finished
[2025-11-21 10:21:28] 2025-11-21 15:20:30,340 | INFO     | [job] queue monitor thread has finished
[2025-11-21 10:21:28] 2025-11-21 15:20:30,341 | INFO     | [job] job monitor thread has finished
[2025-11-21 10:21:28] 2025-11-21 15:20:30,557 | INFO     | [job] validate thread has finished
[2025-11-21 10:21:28] 2025-11-21 15:20:30,738 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 10:21:28] 2025-11-21 15:20:30,910 | INFO     | [data] control thread has finished
[2025-11-21 10:21:28] 2025-11-21 15:20:31,186 | INFO     | [payload] control thread has finished
[2025-11-21 10:21:28] 2025-11-21 15:20:31,212 | INFO     | [job] control thread has finished
[2025-11-21 10:21:28] 2025-11-21 15:20:31,341 | INFO     | [data] copytool_out thread has finished
[2025-11-21 10:21:28] 2025-11-21 15:20:31,355 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 10:21:28] 2025-11-21 15:20:31,408 | INFO     | [data] copytool_in thread has finished
[2025-11-21 10:21:28] 2025-11-21 15:20:31,436 | INFO     | [payload] failed_post thread has finished
[2025-11-21 10:21:28] 2025-11-21 15:20:31,542 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 10:21:28] 2025-11-21 15:20:31,555 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 10:21:28] 2025-11-21 15:20:31,556 | INFO     | [payload] validate_post thread has finished
[2025-11-21 10:21:28] 2025-11-21 15:20:35,548 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 10:21:28] 2025-11-21 15:20:39,659 | INFO     | job.realtimelogging is not enabled
[2025-11-21 10:21:28] 2025-11-21 15:20:40,664 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 10:21:28] 2025-11-21 15:21:00,524 | INFO     | PID=2679702 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 10:21:28] 2025-11-21 15:21:00,524 | INFO     | .. there are 7 such processes running
[2025-11-21 10:21:28] 2025-11-21 15:21:00,525 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 10:21:28] 2025-11-21 15:21:00,526 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 10:21:28] 2025-11-21 15:21:00,526 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 10:21:28] 2025-11-21 15:21:22,674 | INFO     | [monitor] cgroup control has ended
[2025-11-21 10:21:28] 2025-11-21 15:21:23,364 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140025695942464)>', '<ExcThread(monitor, started 140025345840896)>']
[2025-11-21 10:21:28] 2025-11-21 15:21:23,641 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 10:21:28] 2025-11-21 15:21:23,641 | INFO     | [monitor] control thread has ended
[2025-11-21 10:21:28] 2025-11-21 15:21:28,389 | INFO     | all workflow threads have been joined
[2025-11-21 10:21:28] 2025-11-21 15:21:28,390 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 10:21:28] 2025-11-21 15:21:28,390 | INFO     | traces error code: 0
[2025-11-21 10:21:28] 2025-11-21 15:21:28,390 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 10:21:28] 2025-11-21 15:21:28,502 [wrapper] ==== pilot stdout END ====
[2025-11-21 10:21:28] 2025-11-21 15:21:28,505 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 10:21:28] 2025-11-21 15:21:28,509 [wrapper] pilotpid: 2679702
[2025-11-21 10:21:28] 2025-11-21 15:21:28,513 [wrapper] Pilot exit status: 0
[2025-11-21 10:21:28] 2025-11-21 15:21:28,529 [wrapper] pandaids: 6893842488
[2025-11-21 10:21:28] 2025-11-21 15:21:28,592 [wrapper] cleanup supervisor_pilot  469611 2679703
[2025-11-21 10:21:28] 2025-11-21 15:21:28,595 [wrapper] Test setup, not cleaning
[2025-11-21 10:21:28] 2025-11-21 15:21:28,598 [wrapper] apfmon messages muted
[2025-11-21 10:21:28] 2025-11-21 15:21:28,601 [wrapper] ==== wrapper stdout END ====
[2025-11-21 10:21:28] 2025-11-21 15:21:28,604 [wrapper] ==== wrapper stderr END ====
[2025-11-21 10:21:28]  *** Error codes and diagnostics ***
[2025-11-21 10:21:28]     "exeErrorCode": 0,
[2025-11-21 10:21:28]     "exeErrorDiag": "",
[2025-11-21 10:21:28]     "pilotErrorCode": 0,
[2025-11-21 10:21:28]     "pilotErrorDiag": "",
[2025-11-21 10:21:28]  *** Listing of results directory ***
[2025-11-21 10:21:28] total 1340468
[2025-11-21 10:21:28] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-21 10:21:28] -rwx------. 1 boincer umatlas     36292 Nov 20 05:21 runpilot2-wrapper.sh
[2025-11-21 10:21:28] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 05:21 queuedata.json
[2025-11-21 10:21:28] -rw-r--r--. 1 boincer umatlas       100 Nov 20 08:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 10:21:28] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 20 08:31 run_atlas
[2025-11-21 10:21:28] -rw-r--r--. 1 boincer umatlas       105 Nov 20 08:31 job.xml
[2025-11-21 10:21:28] -rw-r--r--. 2 boincer umatlas 409574237 Nov 20 08:31 EVNT.47493127._000193.pool.root.1
[2025-11-21 10:21:28] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 08:31 start_atlas.sh
[2025-11-21 10:21:28] drwxrwx--x. 2 boincer umatlas      4096 Nov 20 08:31 shared
[2025-11-21 10:21:28] -rw-r--r--. 2 boincer umatlas    590103 Nov 20 08:31 input.tar.gz
[2025-11-21 10:21:28] -rw-r--r--. 1 boincer umatlas         0 Nov 20 08:31 boinc_lockfile
[2025-11-21 10:21:28] -rw-r--r--. 1 boincer umatlas      2786 Nov 20 08:31 pandaJob.out
[2025-11-21 10:21:28] -rw-------. 1 boincer umatlas        57 Nov 20 08:31 setup.sh.local
[2025-11-21 10:21:28] -rw-------. 1 boincer umatlas    989448 Nov 20 08:32 agis_schedconf.cvmfs.json
[2025-11-21 10:21:28] drwx------. 5 boincer umatlas      4096 Nov 20 08:32 pilot3
[2025-11-21 10:21:28] -rw-r--r--. 1 boincer umatlas       533 Nov 21 10:09 boinc_task_state.xml
[2025-11-21 10:21:28] -rw-------. 1 boincer umatlas 929038366 Nov 21 10:19 HITS.47523449._001924.pool.root.1
[2025-11-21 10:21:28] -rw-------. 1 boincer umatlas      1052 Nov 21 10:20 memory_monitor_summary.json
[2025-11-21 10:21:28] -rw-------. 1 boincer umatlas   1526164 Nov 21 10:20 agis_ddmendpoints.agis.ALL.json
[2025-11-21 10:21:28] -rw-------. 1 boincer umatlas   2574863 Nov 21 10:20 log.47523449._001924.job.log.tgz.1
[2025-11-21 10:21:28] -rw-r--r--. 1 boincer umatlas      6528 Nov 21 10:20 init_data.xml
[2025-11-21 10:21:28] -rw-------. 1 boincer umatlas      8614 Nov 21 10:20 heartbeat.json
[2025-11-21 10:21:28] -rw-------. 1 boincer umatlas        95 Nov 21 10:21 pilot_heartbeat.json
[2025-11-21 10:21:28] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 10:21 boinc_mmap_file
[2025-11-21 10:21:28] -rw-r--r--. 1 boincer umatlas        29 Nov 21 10:21 wrapper_checkpoint.txt
[2025-11-21 10:21:28] -rw-------. 1 boincer umatlas      4895 Nov 21 10:21 pilotlog.txt
[2025-11-21 10:21:28] -rw-------. 1 boincer umatlas  12473501 Nov 21 10:21 log.47523449._001924.job.log.1
[2025-11-21 10:21:28] -rw-------. 1 boincer umatlas       353 Nov 21 10:21 output.list
[2025-11-21 10:21:28] -rw-r--r--. 1 boincer umatlas       620 Nov 21 10:21 runtime_log
[2025-11-21 10:21:28] -rw-------. 1 boincer umatlas  15073280 Nov 21 10:21 result.tar.gz
[2025-11-21 10:21:28] -rw-r--r--. 1 boincer umatlas      9343 Nov 21 10:21 runtime_log.err
[2025-11-21 10:21:28] -rw-------. 1 boincer umatlas       660 Nov 21 10:21 bpFMDmqxGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmYQGKDmeSkOyn.diag
[2025-11-21 10:21:28] -rw-r--r--. 1 boincer umatlas     21331 Nov 21 10:21 stderr.txt
[2025-11-21 10:21:28] HITS file was successfully produced:
[2025-11-21 10:21:28] -rw-------. 1 boincer umatlas 929038366 Nov 21 10:19 shared/HITS.pool.root.1
[2025-11-21 10:21:28]  *** Contents of shared directory: ***
[2025-11-21 10:21:28] total 1322564
[2025-11-21 10:21:28] -rw-r--r--. 2 boincer umatlas 409574237 Nov 20 08:31 ATLAS.root_0
[2025-11-21 10:21:28] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 08:31 start_atlas.sh
[2025-11-21 10:21:28] -rw-r--r--. 2 boincer umatlas    590103 Nov 20 08:31 input.tar.gz
[2025-11-21 10:21:28] -rw-------. 1 boincer umatlas 929038366 Nov 21 10:19 HITS.pool.root.1
[2025-11-21 10:21:28] -rw-------. 1 boincer umatlas  15073280 Nov 21 10:21 result.tar.gz
10:21:29 (2675934): run_atlas exited; CPU time 502395.912000
10:21:29 (2675934): called boinc_finish(0)

</stderr_txt>
]]>

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