Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:36:30 (26035): wrapper (7.7.26015): starting
01:36:30 (26035): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 01:36:30] Arguments: --nthreads 8
[2025-11-23 01:36:30] Threads: 8
[2025-11-23 01:36:30] Checking for CVMFS
[2025-11-23 01:36:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 01:36:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 01:36:31] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 01:36:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 01:36:32] 2.11.2.0 18802 280288 140360 153191 2 117 13473120 25165824 4475 130560 2 137948462 99.892 73488920 2814 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-23 01:36:32] CVMFS is ok
[2025-11-23 01:36:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 01:36:32] Checking for apptainer binary...
[2025-11-23 01:36:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 01:36:32] Running /usr/bin/apptainer --version
[2025-11-23 01:36:33] apptainer version 1.3.2-1.el7
[2025-11-23 01:36:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 01:36:46] cg-vwn230.simple-grid.lan
[2025-11-23 01:36:46] apptainer works
[2025-11-23 01:36:46] Set ATHENA_PROC_NUMBER=8
[2025-11-23 01:36:46] Set ATHENA_CORE_NUMBER=8
[2025-11-23 01:36:46] Starting ATLAS job with PandaID=6893841469
[2025-11-23 01:36:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 03:59:37]  *** The last 200 lines of the pilot log: ***
[2025-11-24 03:59:37] 2025-11-24 02:58:13,947 | INFO     | time since job start (94651s) is within the limit (172800.0s)
[2025-11-24 03:59:37] 2025-11-24 02:58:14,497 | INFO     | monitor loop #6302: job 0:6893841469 is in state 'finished'
[2025-11-24 03:59:37] 2025-11-24 02:58:14,498 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 03:59:37] 2025-11-24 02:58:15,953 | INFO     | time since job start (94653s) is within the limit (172800.0s)
[2025-11-24 03:59:37] 2025-11-24 02:58:17,003 | INFO     | monitor loop #6303: job 0:6893841469 is in state 'finished'
[2025-11-24 03:59:37] 2025-11-24 02:58:17,004 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 03:59:37] 2025-11-24 02:58:17,960 | INFO     | time since job start (94655s) is within the limit (172800.0s)
[2025-11-24 03:59:37] 2025-11-24 02:58:19,506 | INFO     | monitor loop #6304: job 0:6893841469 is in state 'finished'
[2025-11-24 03:59:37] 2025-11-24 02:58:19,507 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 03:59:37] 2025-11-24 02:58:19,972 | INFO     | time since job start (94657s) is within the limit (172800.0s)
[2025-11-24 03:59:37] 2025-11-24 02:58:21,978 | INFO     | time since job start (94659s) is within the limit (172800.0s)
[2025-11-24 03:59:37] 2025-11-24 02:58:22,011 | INFO     | monitor loop #6305: job 0:6893841469 is in state 'finished'
[2025-11-24 03:59:37] 2025-11-24 02:58:22,012 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 03:59:37] 2025-11-24 02:58:23,990 | INFO     | time since job start (94661s) is within the limit (172800.0s)
[2025-11-24 03:59:37] 2025-11-24 02:58:24,033 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 03:59:37] 2025-11-24 02:58:24,034 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-24 03:59:37] 2025-11-24 02:58:24,036 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6893841469/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 03:59:37] 2025-11-24 02:58:24,036 | INFO     | extracted standard info from prmon json
[2025-11-24 03:59:37] 2025-11-24 02:58:24,037 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 03:59:37] 2025-11-24 02:58:24,037 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 03:59:37] 2025-11-24 02:58:24,066 | INFO     | fitting pss+swap vs Time
[2025-11-24 03:59:37] 2025-11-24 02:58:24,069 | INFO     | sum of square deviations: 1150246176442.442
[2025-11-24 03:59:37] 2025-11-24 02:58:24,141 | INFO     | sum of deviations: 2623264323668.3794
[2025-11-24 03:59:37] 2025-11-24 02:58:24,142 | INFO     | mean x: 1763905757.8875968
[2025-11-24 03:59:37] 2025-11-24 02:58:24,142 | INFO     | mean y: 2864487.5251937984
[2025-11-24 03:59:37] 2025-11-24 02:58:24,142 | INFO     | intersect: -4019918756.3983393
[2025-11-24 03:59:37] 2025-11-24 02:58:24,144 | INFO     | chi2: 16.140818821325205
[2025-11-24 03:59:37] 2025-11-24 02:58:24,147 | INFO     | sum of square deviations: 1139136986057.784
[2025-11-24 03:59:37] 2025-11-24 02:58:24,213 | INFO     | sum of deviations: 3130114723996.3896
[2025-11-24 03:59:37] 2025-11-24 02:58:24,214 | INFO     | mean x: 1763905605.3920934
[2025-11-24 03:59:37] 2025-11-24 02:58:24,214 | INFO     | mean y: 2871444.1464679195
[2025-11-24 03:59:37] 2025-11-24 02:58:24,214 | INFO     | intersect: -4843979263.673045
[2025-11-24 03:59:37] 2025-11-24 02:58:24,216 | INFO     | chi2: 13.012109964994632
[2025-11-24 03:59:37] 2025-11-24 02:58:24,217 | INFO     | current chi2=13.012109964994632 (change=19.383829847572112 %)
[2025-11-24 03:59:37] 2025-11-24 02:58:24,217 | INFO     | right removable region: 1542
[2025-11-24 03:59:37] 2025-11-24 02:58:24,219 | INFO     | sum of square deviations: 1139135675777.7832
[2025-11-24 03:59:37] 2025-11-24 02:58:24,282 | INFO     | sum of deviations: 2134021859755.9595
[2025-11-24 03:59:37] 2025-11-24 02:58:24,282 | INFO     | mean x: 1763905910.3920934
[2025-11-24 03:59:37] 2025-11-24 02:58:24,282 | INFO     | mean y: 2871199.750486066
[2025-11-24 03:59:37] 2025-11-24 02:58:24,282 | INFO     | intersect: -3301576067.9196453
[2025-11-24 03:59:37] 2025-11-24 02:58:24,284 | INFO     | chi2: 13.48250531608714
[2025-11-24 03:59:37] 2025-11-24 02:58:24,284 | INFO     | current chi2=13.48250531608714 (change=16.469508360541834 %)
[2025-11-24 03:59:37] 2025-11-24 02:58:24,285 | INFO     | left removable region: 10
[2025-11-24 03:59:37] 2025-11-24 02:58:24,287 | INFO     | sum of square deviations: 1114947289154.4978
[2025-11-24 03:59:37] 2025-11-24 02:58:24,349 | INFO     | sum of deviations: 2640752520141.3394
[2025-11-24 03:59:37] 2025-11-24 02:58:24,350 | INFO     | mean x: 1763905879.896214
[2025-11-24 03:59:37] 2025-11-24 02:58:24,350 | INFO     | mean y: 2881171.5744125326
[2025-11-24 03:59:37] 2025-11-24 02:58:24,350 | INFO     | intersect: -4174929692.6148734
[2025-11-24 03:59:37] 2025-11-24 02:58:24,352 | INFO     | chi2: 9.594813719888329
[2025-11-24 03:59:37] 2025-11-24 02:58:24,352 | INFO     | current memory leak: 2.37 B/s (using 1532 data points, chi2=9.59)
[2025-11-24 03:59:37] 2025-11-24 02:58:24,355 | INFO     | could have reported an average CPU frequency of 1999 MHz (52 samples)
[2025-11-24 03:59:37] 2025-11-24 02:58:24,355 | INFO     | ..............................
[2025-11-24 03:59:37] 2025-11-24 02:58:24,355 | INFO     | . Timing measurements:
[2025-11-24 03:59:37] 2025-11-24 02:58:24,355 | INFO     | . get job = 0 s
[2025-11-24 03:59:37] 2025-11-24 02:58:24,355 | INFO     | . initial setup = 11 s
[2025-11-24 03:59:37] 2025-11-24 02:58:24,356 | INFO     | . payload setup = 13 s
[2025-11-24 03:59:37] 2025-11-24 02:58:24,356 | INFO     | . stage-in = 0 s
[2025-11-24 03:59:37] 2025-11-24 02:58:24,356 | INFO     | . payload execution = 94433 s
[2025-11-24 03:59:37] 2025-11-24 02:58:24,356 | INFO     | . stage-out = 7 s
[2025-11-24 03:59:37] 2025-11-24 02:58:24,356 | INFO     | . log creation = 1 s
[2025-11-24 03:59:37] 2025-11-24 02:58:24,356 | INFO     | ..............................
[2025-11-24 03:59:37] 2025-11-24 02:58:24,478 | INFO     | 
[2025-11-24 03:59:37] 2025-11-24 02:58:24,478 | INFO     | job summary report
[2025-11-24 03:59:37] 2025-11-24 02:58:24,479 | INFO     | --------------------------------------------------
[2025-11-24 03:59:37] 2025-11-24 02:58:24,479 | INFO     | PanDA job id: 6893841469
[2025-11-24 03:59:37] 2025-11-24 02:58:24,479 | INFO     | task id: 47523449
[2025-11-24 03:59:37] 2025-11-24 02:58:24,479 | INFO     | errors: (none)
[2025-11-24 03:59:37] 2025-11-24 02:58:24,479 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 03:59:37] 2025-11-24 02:58:24,479 | INFO     | pilot state: finished 
[2025-11-24 03:59:37] 2025-11-24 02:58:24,479 | INFO     | transexitcode: 0
[2025-11-24 03:59:37] 2025-11-24 02:58:24,479 | INFO     | exeerrorcode: 0
[2025-11-24 03:59:37] 2025-11-24 02:58:24,479 | INFO     | exeerrordiag: 
[2025-11-24 03:59:37] 2025-11-24 02:58:24,479 | INFO     | exitcode: 0
[2025-11-24 03:59:37] 2025-11-24 02:58:24,479 | INFO     | exitmsg: OK
[2025-11-24 03:59:37] 2025-11-24 02:58:24,480 | INFO     | cpuconsumptiontime: 343934 s
[2025-11-24 03:59:37] 2025-11-24 02:58:24,480 | INFO     | nevents: 1000
[2025-11-24 03:59:37] 2025-11-24 02:58:24,480 | INFO     | neventsw: 0
[2025-11-24 03:59:37] 2025-11-24 02:58:24,480 | INFO     | pid: 4044
[2025-11-24 03:59:37] 2025-11-24 02:58:24,480 | INFO     | pgrp: 4044
[2025-11-24 03:59:37] 2025-11-24 02:58:24,480 | INFO     | corecount: 8
[2025-11-24 03:59:37] 2025-11-24 02:58:24,480 | INFO     | event service: False
[2025-11-24 03:59:37] 2025-11-24 02:58:24,480 | INFO     | sizes: {0: 2298636, 1: 2298835, 2: 2298835, 12: 2298863, 23: 2298891, 34: 2298919, 45: 2299075, 55: 2299103, 66: 2299131, 77: 2299159, 82: 2299477, 88: 2299813, 94
[2025-11-24 03:59:37] 2025-11-24 02:58:24,480 | INFO     | --------------------------------------------------
[2025-11-24 03:59:37] 2025-11-24 02:58:24,480 | INFO     | 
[2025-11-24 03:59:37] 2025-11-24 02:58:24,481 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-11-24 03:59:37] 2025-11-24 02:58:24,889 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 03:59:37] 2025-11-24 02:58:24,889 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 03:59:37] 2025-11-24 02:58:24,889 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 03:59:37] 2025-11-24 02:58:24,890 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 03:59:37] 2025-11-24 02:58:24,890 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 03:59:37] 2025-11-24 02:58:24,890 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 03:59:37] 2025-11-24 02:58:24,890 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 03:59:37] 2025-11-24 02:58:24,890 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 03:59:37] 2025-11-24 02:58:24,890 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 03:59:37] 2025-11-24 02:58:24,890 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 03:59:37] 2025-11-24 02:58:24,890 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 03:59:37] 2025-11-24 02:58:24,890 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 03:59:37] 2025-11-24 02:58:24,890 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 03:59:37] 2025-11-24 02:58:24,890 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 03:59:37] 2025-11-24 02:58:24,891 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 03:59:37] 2025-11-24 02:58:24,891 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 03:59:37] 2025-11-24 02:58:24,891 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 03:59:37] 2025-11-24 02:58:24,891 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 03:59:37] 2025-11-24 02:58:24,891 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 03:59:37] 2025-11-24 02:58:24,891 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 03:59:37] 2025-11-24 02:58:24,891 | INFO     | job 6893841469 has completed (purged errors)
[2025-11-24 03:59:37] 2025-11-24 02:58:24,891 | INFO     | overall cleanup function is called
[2025-11-24 03:59:37] 2025-11-24 02:58:25,147 | INFO     | PID=29826 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 03:59:37] 2025-11-24 02:58:25,148 | INFO     | .. there are 9 such processes running
[2025-11-24 03:59:37] 2025-11-24 02:58:25,910 | INFO     | --- collectZombieJob: --- 10, [4044]
[2025-11-24 03:59:37] 2025-11-24 02:58:25,911 | INFO     | zombie collector waiting for pid 4044
[2025-11-24 03:59:37] 2025-11-24 02:58:25,911 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 03:59:37] 2025-11-24 02:58:25,911 | INFO     | collected zombie processes
[2025-11-24 03:59:37] 2025-11-24 02:58:25,911 | INFO     | will attempt to kill all subprocesses of pid=4044
[2025-11-24 03:59:37] 2025-11-24 02:58:26,031 | INFO     | process IDs to be killed: [4044] (in reverse order)
[2025-11-24 03:59:37] 2025-11-24 02:58:27,144 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 03:59:37] 2025-11-24 02:58:27,145 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 03:59:37] 2025-11-24 02:58:27,148 | INFO     | did not find any defunct processes belonging to 4044
[2025-11-24 03:59:37] 2025-11-24 02:58:27,151 | INFO     | did not find any defunct processes belonging to 4044
[2025-11-24 03:59:37] 2025-11-24 02:58:27,216 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 03:59:37] 2025-11-24 02:58:27,216 | INFO     | ready for new job
[2025-11-24 03:59:37] 2025-11-24 02:58:27,216 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 03:59:37] 2025-11-24 02:58:27,223 | INFO     | ***************************************
[2025-11-24 03:59:37] 2025-11-24 02:58:27,223 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 03:59:37] 2025-11-24 02:58:27,223 | INFO     | ***************************************
[2025-11-24 03:59:37] 2025-11-24 02:58:27,223 | INFO     | 
[2025-11-24 03:59:37] 2025-11-24 02:58:27,224 | INFO     | pilot is running in a VM
[2025-11-24 03:59:37] 2025-11-24 02:58:27,224 | INFO     | architecture information:
[2025-11-24 03:59:37] 2025-11-24 02:58:27,239 | INFO     | executing command: cat /etc/os-release
[2025-11-24 03:59:37] 2025-11-24 02:58:27,518 | INFO     | cat /etc/os-release:
[2025-11-24 03:59:37] NAME="CentOS Linux"
[2025-11-24 03:59:37] VERSION="7 (Core)"
[2025-11-24 03:59:37] ID="centos"
[2025-11-24 03:59:37] ID_LIKE="rhel fedora"
[2025-11-24 03:59:37] VERSION_ID="7"
[2025-11-24 03:59:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 03:59:37] ANSI_COLOR="0;31"
[2025-11-24 03:59:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 03:59:37] HOME_URL="https://www.centos.org/"
[2025-11-24 03:59:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 03:59:37] 
[2025-11-24 03:59:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 03:59:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 03:59:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 03:59:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 03:59:37] 
[2025-11-24 03:59:37] 2025-11-24 02:58:27,518 | INFO     | ***************************************
[2025-11-24 03:59:37] 2025-11-24 02:58:28,022 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-11-24 03:59:37] 2025-11-24 02:58:28,337 | INFO     | sufficient remaining disk space (495080964096 B)
[2025-11-24 03:59:37] 2025-11-24 02:58:28,337 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 03:59:37] 2025-11-24 02:58:28,337 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 03:59:37] 2025-11-24 02:58:28,337 | INFO     | update_server=False
[2025-11-24 03:59:37] 2025-11-24 02:58:28,338 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 03:59:37] 2025-11-24 02:58:28,340 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 03:59:37] 2025-11-24 02:58:28,341 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 03:59:37] 2025-11-24 02:58:28,341 | INFO     | aborting loop
[2025-11-24 03:59:37] 2025-11-24 02:58:28,529 | INFO     | all data control threads have been joined
[2025-11-24 03:59:37] 2025-11-24 02:58:28,679 | INFO     | all payload control threads have been joined
[2025-11-24 03:59:37] 2025-11-24 02:58:28,695 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 03:59:37] 2025-11-24 02:58:29,174 | INFO     | all job control threads have been joined
[2025-11-24 03:59:37] 2025-11-24 02:58:29,344 | INFO     | [job] retrieve thread has finished
[2025-11-24 03:59:37] 2025-11-24 02:58:29,348 | INFO     | [job] job monitor thread has finished
[2025-11-24 03:59:37] 2025-11-24 02:58:29,438 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 03:59:37] 2025-11-24 02:58:29,494 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 03:59:37] 2025-11-24 02:58:29,496 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 03:59:37] 2025-11-24 02:58:29,514 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 03:59:37] 2025-11-24 02:58:29,534 | INFO     | [data] control thread has finished
[2025-11-24 03:59:37] 2025-11-24 02:58:29,686 | INFO     | [payload] control thread has finished
[2025-11-24 03:59:37] 2025-11-24 02:58:29,748 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 03:59:37] 2025-11-24 02:58:29,799 | INFO     | [payload] validate_post thread has finished
[2025-11-24 03:59:37] 2025-11-24 02:58:30,180 | INFO     | [job] control thread has finished
[2025-11-24 03:59:37] 2025-11-24 02:58:30,345 | INFO     | [data] copytool_in thread has finished
[2025-11-24 03:59:37] 2025-11-24 02:58:30,380 | INFO     | [job] validate thread has finished
[2025-11-24 03:59:37] 2025-11-24 02:58:30,502 | INFO     | [job] queue monitor thread has finished
[2025-11-24 03:59:37] 2025-11-24 02:58:30,701 | INFO     | [data] copytool_out thread has finished
[2025-11-24 03:59:37] 2025-11-24 02:58:30,798 | INFO     | [payload] failed_post thread has finished
[2025-11-24 03:59:37] 2025-11-24 02:58:32,350 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 03:59:37] 2025-11-24 02:58:57,372 | INFO     | PID=29826 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 03:59:37] 2025-11-24 02:58:57,372 | INFO     | .. there are 9 such processes running
[2025-11-24 03:59:37] 2025-11-24 02:58:57,372 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 03:59:37] 2025-11-24 02:58:57,373 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 03:59:37] 2025-11-24 02:58:57,373 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 03:59:37] 2025-11-24 02:59:26,928 | INFO     | [monitor] cgroup control has ended
[2025-11-24 03:59:37] 2025-11-24 02:59:27,626 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140116850583360)>', '<ExcThread(monitor, started 140116546787072)>']
[2025-11-24 03:59:37] 2025-11-24 02:59:28,556 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 03:59:37] 2025-11-24 02:59:28,557 | INFO     | [monitor] control thread has ended
[2025-11-24 03:59:37] 2025-11-24 02:59:32,652 | INFO     | all workflow threads have been joined
[2025-11-24 03:59:37] 2025-11-24 02:59:32,653 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 03:59:37] 2025-11-24 02:59:32,653 | INFO     | traces error code: 0
[2025-11-24 03:59:37] 2025-11-24 02:59:32,653 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 03:59:37] 2025-11-24 02:59:32,940 [wrapper] ==== pilot stdout END ====
[2025-11-24 03:59:37] 2025-11-24 02:59:32,949 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 03:59:37] 2025-11-24 02:59:32,969 [wrapper] pilotpid: 29826
[2025-11-24 03:59:37] 2025-11-24 02:59:32,994 [wrapper] Pilot exit status: 0
[2025-11-24 03:59:37] 2025-11-24 02:59:33,288 [wrapper] pandaids: 6893841469
[2025-11-24 03:59:37] 2025-11-24 02:59:34,120 [wrapper] cleanup supervisor_pilot 23612 29827
[2025-11-24 03:59:37] 2025-11-24 02:59:34,214 [wrapper] Test setup, not cleaning
[2025-11-24 03:59:37] 2025-11-24 02:59:34,315 [wrapper] apfmon messages muted
[2025-11-24 03:59:37] 2025-11-24 02:59:34,376 [wrapper] ==== wrapper stdout END ====
[2025-11-24 03:59:37] 2025-11-24 02:59:34,473 [wrapper] ==== wrapper stderr END ====
[2025-11-24 03:59:37]  *** Error codes and diagnostics ***
[2025-11-24 03:59:37]     "exeErrorCode": 0,
[2025-11-24 03:59:37]     "exeErrorDiag": "",
[2025-11-24 03:59:37]     "pilotErrorCode": 0,
[2025-11-24 03:59:37]     "pilotErrorDiag": "",
[2025-11-24 03:59:37]  *** Listing of results directory ***
[2025-11-24 03:59:37] total 1334584
[2025-11-24 03:59:37] -rw-r--r--. 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-24 03:59:37] -rwx------. 1 boinc boinc     36292 Nov 20 11:21 runpilot2-wrapper.sh
[2025-11-24 03:59:37] -rw-r--r--. 1 boinc boinc      5112 Nov 20 11:21 queuedata.json
[2025-11-24 03:59:37] -rw-r--r--. 1 boinc boinc       100 Nov 23 01:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 03:59:37] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 01:36 run_atlas
[2025-11-24 03:59:37] -rw-r--r--. 1 boinc boinc       105 Nov 23 01:36 job.xml
[2025-11-24 03:59:37] -rw-r--r--. 2 boinc boinc 410476731 Nov 23 01:36 EVNT.47493127._000180.pool.root.1
[2025-11-24 03:59:37] -rw-r--r--. 1 boinc boinc      6392 Nov 23 01:36 init_data.xml
[2025-11-24 03:59:37] -rw-r--r--. 2 boinc boinc     15847 Nov 23 01:36 start_atlas.sh
[2025-11-24 03:59:37] drwxrwx--x. 2 boinc boinc        68 Nov 23 01:36 shared
[2025-11-24 03:59:37] -rw-r--r--. 2 boinc boinc    590102 Nov 23 01:36 input.tar.gz
[2025-11-24 03:59:37] -rw-r--r--. 1 boinc boinc         0 Nov 23 01:36 boinc_lockfile
[2025-11-24 03:59:37] -rw-r--r--. 1 boinc boinc      2786 Nov 23 01:36 pandaJob.out
[2025-11-24 03:59:37] -rw-------. 1 boinc boinc    989784 Nov 23 01:40 agis_schedconf.cvmfs.json
[2025-11-24 03:59:37] drwx------. 5 boinc boinc      4096 Nov 23 01:40 pilot3
[2025-11-24 03:59:37] -rw-r--r--. 1 boinc boinc       533 Nov 24 03:31 boinc_task_state.xml
[2025-11-24 03:59:37] -rw-------. 1 boinc boinc 921929120 Nov 24 03:55 HITS.47523449._001799.pool.root.1
[2025-11-24 03:59:37] -rw-------. 1 boinc boinc      1031 Nov 24 03:56 memory_monitor_summary.json
[2025-11-24 03:59:37] -rw-------. 1 boinc boinc   1526164 Nov 24 03:56 agis_ddmendpoints.agis.ALL.json
[2025-11-24 03:59:37] -rw-------. 1 boinc boinc   2591642 Nov 24 03:56 log.47523449._001799.job.log.tgz.1
[2025-11-24 03:59:37] -rw-------. 1 boinc boinc        95 Nov 24 03:58 pilot_heartbeat.json
[2025-11-24 03:59:37] -rw-------. 1 boinc boinc      8627 Nov 24 03:58 heartbeat.json
[2025-11-24 03:59:37] -rw-r--r--. 1 boinc boinc      8192 Nov 24 03:59 boinc_mmap_file
[2025-11-24 03:59:37] -rw-r--r--. 1 boinc boinc        29 Nov 24 03:59 wrapper_checkpoint.txt
[2025-11-24 03:59:37] -rw-------. 1 boinc boinc      4884 Nov 24 03:59 pilotlog.txt
[2025-11-24 03:59:37] -rw-------. 1 boinc boinc  12558490 Nov 24 03:59 log.47523449._001799.job.log.1
[2025-11-24 03:59:37] -rw-------. 1 boinc boinc       353 Nov 24 03:59 output.list
[2025-11-24 03:59:37] -rw-r--r--. 1 boinc boinc       620 Nov 24 03:59 runtime_log
[2025-11-24 03:59:37] -rw-------. 1 boinc boinc  15165440 Nov 24 03:59 result.tar.gz
[2025-11-24 03:59:37] -rw-r--r--. 1 boinc boinc      8817 Nov 24 03:59 runtime_log.err
[2025-11-24 03:59:37] -rw-------. 1 boinc boinc       662 Nov 24 03:59 FQYLDmqxGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2PGKDmRHO7Ko.diag
[2025-11-24 03:59:37] -rw-r--r--. 1 boinc boinc     21503 Nov 24 03:59 stderr.txt
[2025-11-24 03:59:37] HITS file was successfully produced:
[2025-11-24 03:59:37] -rw-------. 1 boinc boinc 921929120 Nov 24 03:55 shared/HITS.pool.root.1
[2025-11-24 03:59:37]  *** Contents of shared directory: ***
[2025-11-24 03:59:37] total 1316592
[2025-11-24 03:59:37] -rw-r--r--. 2 boinc boinc 410476731 Nov 23 01:36 ATLAS.root_0
[2025-11-24 03:59:37] -rw-r--r--. 2 boinc boinc     15847 Nov 23 01:36 start_atlas.sh
[2025-11-24 03:59:37] -rw-r--r--. 2 boinc boinc    590102 Nov 23 01:36 input.tar.gz
[2025-11-24 03:59:37] -rw-------. 1 boinc boinc 921929120 Nov 24 03:55 HITS.pool.root.1
[2025-11-24 03:59:37] -rw-------. 1 boinc boinc  15165440 Nov 24 03:59 result.tar.gz
03:59:39 (26035): run_atlas exited; CPU time 344455.812473
03:59:39 (26035): called boinc_finish(0)

</stderr_txt>
]]>

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