Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:57:25 (14485): wrapper (7.7.26015): starting
04:57:25 (14485): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 04:57:25] Arguments: --nthreads 8
[2025-11-23 04:57:25] Threads: 8
[2025-11-23 04:57:25] Checking for CVMFS
[2025-11-23 04:57:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 04:57:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 04:57:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 04:57:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 04:57:27] 2.11.2.0 30456 280373 141860 153195 0 128 14487302 25165825 4296 130560 3 118970772 99.867 77774002 3017 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-23 04:57:27] CVMFS is ok
[2025-11-23 04:57:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 04:57:27] Checking for apptainer binary...
[2025-11-23 04:57:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 04:57:27] Running /usr/bin/apptainer --version
[2025-11-23 04:57:27] apptainer version 1.3.2-1.el7
[2025-11-23 04:57:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 04:57:30] cg-vwn385.simple-grid.lan
[2025-11-23 04:57:30] apptainer works
[2025-11-23 04:57:30] Set ATHENA_PROC_NUMBER=8
[2025-11-23 04:57:30] Set ATHENA_CORE_NUMBER=8
[2025-11-23 04:57:31] Starting ATLAS job with PandaID=6893840287
[2025-11-23 04:57:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 05:52:57]  *** The last 200 lines of the pilot log: ***
[2025-11-24 05:52:57] 2025-11-24 04:51:48,520 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6893840287/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 05:52:57] 2025-11-24 04:51:48,521 | INFO     | extracted standard info from prmon json
[2025-11-24 05:52:57] 2025-11-24 04:51:48,521 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 05:52:57] 2025-11-24 04:51:48,521 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 05:52:57] 2025-11-24 04:51:48,550 | INFO     | fitting pss+swap vs Time
[2025-11-24 05:52:57] 2025-11-24 04:51:48,553 | INFO     | sum of square deviations: 963040031381.9542
[2025-11-24 05:52:57] 2025-11-24 04:51:48,596 | INFO     | monitor loop #5985: job 0:6893840287 is in state 'finished'
[2025-11-24 05:52:57] 2025-11-24 04:51:48,596 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 05:52:57] 2025-11-24 04:51:48,615 | INFO     | sum of deviations: 4060917647994.3003
[2025-11-24 05:52:57] 2025-11-24 04:51:48,615 | INFO     | mean x: 1763915392.4139822
[2025-11-24 05:52:57] 2025-11-24 04:51:48,616 | INFO     | mean y: 2862524.886908842
[2025-11-24 05:52:57] 2025-11-24 04:51:48,616 | INFO     | intersect: -7435161766.1113825
[2025-11-24 05:52:57] 2025-11-24 04:51:48,618 | INFO     | chi2: 12.642254504343642
[2025-11-24 05:52:57] 2025-11-24 04:51:48,620 | INFO     | sum of square deviations: 953173526744.4236
[2025-11-24 05:52:57] 2025-11-24 04:51:48,679 | INFO     | sum of deviations: 4549361101877.983
[2025-11-24 05:52:57] 2025-11-24 04:51:48,679 | INFO     | mean x: 1763915239.9188445
[2025-11-24 05:52:57] 2025-11-24 04:51:48,679 | INFO     | mean y: 2870073.635488308
[2025-11-24 05:52:57] 2025-11-24 04:51:48,680 | INFO     | intersect: -8416045427.411823
[2025-11-24 05:52:57] 2025-11-24 04:51:48,681 | INFO     | chi2: 9.50224131060566
[2025-11-24 05:52:57] 2025-11-24 04:51:48,682 | INFO     | current chi2=9.50224131060566 (change=24.83744645908791 %)
[2025-11-24 05:52:57] 2025-11-24 04:51:48,682 | INFO     | right removable region: 1453
[2025-11-24 05:52:57] 2025-11-24 04:51:48,684 | INFO     | sum of square deviations: 953172268314.4237
[2025-11-24 05:52:57] 2025-11-24 04:51:48,742 | INFO     | sum of deviations: 3505237978406.783
[2025-11-24 05:52:57] 2025-11-24 04:51:48,743 | INFO     | mean x: 1763915544.9188445
[2025-11-24 05:52:57] 2025-11-24 04:51:48,743 | INFO     | mean y: 2871111.150618982
[2025-11-24 05:52:57] 2025-11-24 04:51:48,743 | INFO     | intersect: -6483830153.968497
[2025-11-24 05:52:57] 2025-11-24 04:51:48,745 | INFO     | chi2: 8.837371159291349
[2025-11-24 05:52:57] 2025-11-24 04:51:48,745 | INFO     | current chi2=8.837371159291349 (change=30.096557095453235 %)
[2025-11-24 05:52:57] 2025-11-24 04:51:48,747 | INFO     | sum of square deviations: 943372134421.8236
[2025-11-24 05:52:57] 2025-11-24 04:51:48,816 | INFO     | sum of deviations: 3059696215388.717
[2025-11-24 05:52:57] 2025-11-24 04:51:48,817 | INFO     | mean x: 1763915697.4237406
[2025-11-24 05:52:57] 2025-11-24 04:51:48,817 | INFO     | mean y: 2878042.816425121
[2025-11-24 05:52:57] 2025-11-24 04:51:48,817 | INFO     | intersect: -5718137012.371657
[2025-11-24 05:52:57] 2025-11-24 04:51:48,819 | INFO     | chi2: 6.453579188501265
[2025-11-24 05:52:57] 2025-11-24 04:51:48,819 | INFO     | current chi2=6.453579188501265 (change=26.973994051204205 %)
[2025-11-24 05:52:57] 2025-11-24 04:51:48,821 | INFO     | sum of square deviations: 933639927360.772
[2025-11-24 05:52:57] 2025-11-24 04:51:48,887 | INFO     | sum of deviations: 2892620814051.7
[2025-11-24 05:52:57] 2025-11-24 04:51:48,888 | INFO     | mean x: 1763915849.9245152
[2025-11-24 05:52:57] 2025-11-24 04:51:48,888 | INFO     | mean y: 2880659.070637119
[2025-11-24 05:52:57] 2025-11-24 04:51:48,888 | INFO     | intersect: -5462116661.845921
[2025-11-24 05:52:57] 2025-11-24 04:51:48,890 | INFO     | chi2: 6.1364717009208345
[2025-11-24 05:52:57] 2025-11-24 04:51:48,891 | INFO     | current chi2=6.1364717009208345 (change=4.913668498024166 %)
[2025-11-24 05:52:57] 2025-11-24 04:51:48,891 | INFO     | left removable region: 30
[2025-11-24 05:52:57] 2025-11-24 04:51:48,893 | INFO     | sum of square deviations: 893496595944.7928
[2025-11-24 05:52:57] 2025-11-24 04:51:48,951 | INFO     | sum of deviations: 3214309567088.2153
[2025-11-24 05:52:57] 2025-11-24 04:51:48,952 | INFO     | mean x: 1763916124.4300773
[2025-11-24 05:52:57] 2025-11-24 04:51:48,952 | INFO     | mean y: 2894578.966971188
[2025-11-24 05:52:57] 2025-11-24 04:51:48,952 | INFO     | intersect: -6342705952.73006
[2025-11-24 05:52:57] 2025-11-24 04:51:48,954 | INFO     | chi2: 2.0098071713741557
[2025-11-24 05:52:57] 2025-11-24 04:51:48,954 | INFO     | current memory leak: 3.60 B/s (using 1423 data points, chi2=2.01)
[2025-11-24 05:52:57] 2025-11-24 04:51:48,957 | INFO     | could have reported an average CPU frequency of 1999 MHz (49 samples)
[2025-11-24 05:52:57] 2025-11-24 04:51:48,958 | INFO     | ..............................
[2025-11-24 05:52:57] 2025-11-24 04:51:48,958 | INFO     | . Timing measurements:
[2025-11-24 05:52:57] 2025-11-24 04:51:48,958 | INFO     | . get job = 0 s
[2025-11-24 05:52:57] 2025-11-24 04:51:48,958 | INFO     | . initial setup = 3 s
[2025-11-24 05:52:57] 2025-11-24 04:51:48,958 | INFO     | . payload setup = 127 s
[2025-11-24 05:52:57] 2025-11-24 04:51:48,958 | INFO     | . stage-in = 0 s
[2025-11-24 05:52:57] 2025-11-24 04:51:48,958 | INFO     | . payload execution = 89119 s
[2025-11-24 05:52:57] 2025-11-24 04:51:48,958 | INFO     | . stage-out = 4 s
[2025-11-24 05:52:57] 2025-11-24 04:51:48,958 | INFO     | . log creation = 1 s
[2025-11-24 05:52:57] 2025-11-24 04:51:48,958 | INFO     | ..............................
[2025-11-24 05:52:57] 2025-11-24 04:51:49,089 | INFO     | 
[2025-11-24 05:52:57] 2025-11-24 04:51:49,089 | INFO     | job summary report
[2025-11-24 05:52:57] 2025-11-24 04:51:49,089 | INFO     | --------------------------------------------------
[2025-11-24 05:52:57] 2025-11-24 04:51:49,089 | INFO     | PanDA job id: 6893840287
[2025-11-24 05:52:57] 2025-11-24 04:51:49,089 | INFO     | task id: 47523449
[2025-11-24 05:52:57] 2025-11-24 04:51:49,090 | INFO     | errors: (none)
[2025-11-24 05:52:57] 2025-11-24 04:51:49,090 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 05:52:57] 2025-11-24 04:51:49,090 | INFO     | pilot state: finished 
[2025-11-24 05:52:57] 2025-11-24 04:51:49,090 | INFO     | transexitcode: 0
[2025-11-24 05:52:57] 2025-11-24 04:51:49,090 | INFO     | exeerrorcode: 0
[2025-11-24 05:52:57] 2025-11-24 04:51:49,090 | INFO     | exeerrordiag: 
[2025-11-24 05:52:57] 2025-11-24 04:51:49,090 | INFO     | exitcode: 0
[2025-11-24 05:52:57] 2025-11-24 04:51:49,090 | INFO     | exitmsg: OK
[2025-11-24 05:52:57] 2025-11-24 04:51:49,090 | INFO     | cpuconsumptiontime: 328194 s
[2025-11-24 05:52:57] 2025-11-24 04:51:49,091 | INFO     | nevents: 1000
[2025-11-24 05:52:57] 2025-11-24 04:51:49,091 | INFO     | neventsw: 0
[2025-11-24 05:52:57] 2025-11-24 04:51:49,091 | INFO     | pid: 24958
[2025-11-24 05:52:57] 2025-11-24 04:51:49,091 | INFO     | pgrp: 24958
[2025-11-24 05:52:57] 2025-11-24 04:51:49,091 | INFO     | corecount: 8
[2025-11-24 05:52:57] 2025-11-24 04:51:49,091 | INFO     | event service: False
[2025-11-24 05:52:57] 2025-11-24 04:51:49,091 | INFO     | sizes: {0: 2298581, 1: 2298836, 12: 2298836, 23: 2298864, 33: 2298892, 44: 2298948, 55: 2299104, 66: 2299132, 76: 2299160, 86: 2299478, 87: 2299506, 89250: 2363047
[2025-11-24 05:52:57] 2025-11-24 04:51:49,091 | INFO     | --------------------------------------------------
[2025-11-24 05:52:57] 2025-11-24 04:51:49,091 | INFO     | 
[2025-11-24 05:52:57] 2025-11-24 04:51:49,092 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-11-24 05:52:57] 2025-11-24 04:51:49,151 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 05:52:57] 2025-11-24 04:51:49,152 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 05:52:57] 2025-11-24 04:51:49,152 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 05:52:57] 2025-11-24 04:51:49,152 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 05:52:57] 2025-11-24 04:51:49,152 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 05:52:57] 2025-11-24 04:51:49,152 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 05:52:57] 2025-11-24 04:51:49,152 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 05:52:57] 2025-11-24 04:51:49,152 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 05:52:57] 2025-11-24 04:51:49,152 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 05:52:57] 2025-11-24 04:51:49,153 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 05:52:57] 2025-11-24 04:51:49,153 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 05:52:57] 2025-11-24 04:51:49,153 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 05:52:57] 2025-11-24 04:51:49,153 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 05:52:57] 2025-11-24 04:51:49,153 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 05:52:57] 2025-11-24 04:51:49,153 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 05:52:57] 2025-11-24 04:51:49,154 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 05:52:57] 2025-11-24 04:51:49,154 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 05:52:57] 2025-11-24 04:51:49,154 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 05:52:57] 2025-11-24 04:51:49,154 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 05:52:57] 2025-11-24 04:51:49,154 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 05:52:57] 2025-11-24 04:51:49,155 | INFO     | job 6893840287 has completed (purged errors)
[2025-11-24 05:52:57] 2025-11-24 04:51:49,155 | INFO     | overall cleanup function is called
[2025-11-24 05:52:57] 2025-11-24 04:51:50,173 | INFO     | --- collectZombieJob: --- 10, [24958]
[2025-11-24 05:52:57] 2025-11-24 04:51:50,174 | INFO     | zombie collector waiting for pid 24958
[2025-11-24 05:52:57] 2025-11-24 04:51:50,174 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 05:52:57] 2025-11-24 04:51:50,174 | INFO     | collected zombie processes
[2025-11-24 05:52:57] 2025-11-24 04:51:50,174 | INFO     | will attempt to kill all subprocesses of pid=24958
[2025-11-24 05:52:57] 2025-11-24 04:51:50,275 | INFO     | process IDs to be killed: [24958] (in reverse order)
[2025-11-24 05:52:57] 2025-11-24 04:51:50,360 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 05:52:57] 2025-11-24 04:51:50,361 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 05:52:57] 2025-11-24 04:51:50,366 | INFO     | did not find any defunct processes belonging to 24958
[2025-11-24 05:52:57] 2025-11-24 04:51:50,370 | INFO     | did not find any defunct processes belonging to 24958
[2025-11-24 05:52:57] 2025-11-24 04:51:50,372 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 05:52:57] 2025-11-24 04:51:50,372 | INFO     | ready for new job
[2025-11-24 05:52:57] 2025-11-24 04:51:50,372 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 05:52:57] 2025-11-24 04:51:50,379 | INFO     | ***************************************
[2025-11-24 05:52:57] 2025-11-24 04:51:50,379 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 05:52:57] 2025-11-24 04:51:50,379 | INFO     | ***************************************
[2025-11-24 05:52:57] 2025-11-24 04:51:50,380 | INFO     | 
[2025-11-24 05:52:57] 2025-11-24 04:51:50,380 | INFO     | pilot is running in a VM
[2025-11-24 05:52:57] 2025-11-24 04:51:50,380 | INFO     | architecture information:
[2025-11-24 05:52:57] 2025-11-24 04:51:50,381 | INFO     | executing command: cat /etc/os-release
[2025-11-24 05:52:57] 2025-11-24 04:51:50,413 | INFO     | cat /etc/os-release:
[2025-11-24 05:52:57] NAME="CentOS Linux"
[2025-11-24 05:52:57] VERSION="7 (Core)"
[2025-11-24 05:52:57] ID="centos"
[2025-11-24 05:52:57] ID_LIKE="rhel fedora"
[2025-11-24 05:52:57] VERSION_ID="7"
[2025-11-24 05:52:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 05:52:57] ANSI_COLOR="0;31"
[2025-11-24 05:52:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 05:52:57] HOME_URL="https://www.centos.org/"
[2025-11-24 05:52:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 05:52:57] 
[2025-11-24 05:52:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 05:52:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 05:52:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 05:52:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 05:52:57] 
[2025-11-24 05:52:57] 2025-11-24 04:51:50,413 | INFO     | ***************************************
[2025-11-24 05:52:57] 2025-11-24 04:51:50,917 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-11-24 05:52:57] 2025-11-24 04:51:50,947 | INFO     | sufficient remaining disk space (495132344320 B)
[2025-11-24 05:52:57] 2025-11-24 04:51:50,947 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 05:52:57] 2025-11-24 04:51:50,948 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 05:52:57] 2025-11-24 04:51:50,948 | INFO     | update_server=False
[2025-11-24 05:52:57] 2025-11-24 04:51:50,948 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 05:52:57] 2025-11-24 04:51:50,948 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 05:52:57] 2025-11-24 04:51:50,949 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 05:52:57] 2025-11-24 04:51:51,091 | INFO     | all data control threads have been joined
[2025-11-24 05:52:57] 2025-11-24 04:51:51,099 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 05:52:57] 2025-11-24 04:51:51,100 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 05:52:57] 2025-11-24 04:51:51,100 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 05:52:57] 2025-11-24 04:51:51,100 | INFO     | will abort loop
[2025-11-24 05:52:57] 2025-11-24 04:51:51,474 | INFO     | all payload control threads have been joined
[2025-11-24 05:52:57] 2025-11-24 04:51:51,640 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 05:52:57] 2025-11-24 04:51:51,814 | INFO     | all job control threads have been joined
[2025-11-24 05:52:57] 2025-11-24 04:51:51,953 | INFO     | [job] retrieve thread has finished
[2025-11-24 05:52:57] 2025-11-24 04:51:51,954 | INFO     | [job] queue monitor thread has finished
[2025-11-24 05:52:57] 2025-11-24 04:51:52,015 | INFO     | [job] validate thread has finished
[2025-11-24 05:52:57] 2025-11-24 04:51:52,098 | INFO     | [data] control thread has finished
[2025-11-24 05:52:57] 2025-11-24 04:51:52,106 | INFO     | [job] job monitor thread has finished
[2025-11-24 05:52:57] 2025-11-24 04:51:52,479 | INFO     | [payload] control thread has finished
[2025-11-24 05:52:57] 2025-11-24 04:51:52,689 | INFO     | [payload] failed_post thread has finished
[2025-11-24 05:52:57] 2025-11-24 04:51:52,819 | INFO     | [job] control thread has finished
[2025-11-24 05:52:57] 2025-11-24 04:51:52,953 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 05:52:57] 2025-11-24 04:51:52,999 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 05:52:57] 2025-11-24 04:51:53,183 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 05:52:57] 2025-11-24 04:51:53,195 | INFO     | [payload] validate_post thread has finished
[2025-11-24 05:52:57] 2025-11-24 04:51:53,239 | INFO     | [data] copytool_in thread has finished
[2025-11-24 05:52:57] 2025-11-24 04:51:53,432 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 05:52:57] 2025-11-24 04:51:53,646 | INFO     | [data] copytool_out thread has finished
[2025-11-24 05:52:57] 2025-11-24 04:51:54,956 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 05:52:57] 2025-11-24 04:52:20,927 | INFO     | PID=18310 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 05:52:57] 2025-11-24 04:52:20,928 | INFO     | .. there are 9 such processes running
[2025-11-24 05:52:57] 2025-11-24 04:52:20,929 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 05:52:57] 2025-11-24 04:52:20,930 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 05:52:57] 2025-11-24 04:52:20,930 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 05:52:57] 2025-11-24 04:52:48,895 | INFO     | [monitor] cgroup control has ended
[2025-11-24 05:52:57] 2025-11-24 04:52:50,474 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140541164578624)>', '<ExcThread(monitor, started 140540557375232)>']
[2025-11-24 05:52:57] 2025-11-24 04:52:51,109 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 05:52:57] 2025-11-24 04:52:51,110 | INFO     | [monitor] control thread has ended
[2025-11-24 05:52:57] 2025-11-24 04:52:55,500 | INFO     | all workflow threads have been joined
[2025-11-24 05:52:57] 2025-11-24 04:52:55,501 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 05:52:57] 2025-11-24 04:52:55,501 | INFO     | traces error code: 0
[2025-11-24 05:52:57] 2025-11-24 04:52:55,501 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 05:52:57] 2025-11-24 04:52:55,746 [wrapper] ==== pilot stdout END ====
[2025-11-24 05:52:57] 2025-11-24 04:52:55,752 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 05:52:57] 2025-11-24 04:52:55,761 [wrapper] pilotpid: 18310
[2025-11-24 05:52:57] 2025-11-24 04:52:55,767 [wrapper] Pilot exit status: 0
[2025-11-24 05:52:57] 2025-11-24 04:52:55,811 [wrapper] pandaids: 6893840287
[2025-11-24 05:52:57] 2025-11-24 04:52:55,854 [wrapper] cleanup supervisor_pilot 17147 18311
[2025-11-24 05:52:57] 2025-11-24 04:52:55,860 [wrapper] Test setup, not cleaning
[2025-11-24 05:52:57] 2025-11-24 04:52:55,863 [wrapper] apfmon messages muted
[2025-11-24 05:52:57] 2025-11-24 04:52:55,867 [wrapper] ==== wrapper stdout END ====
[2025-11-24 05:52:57] 2025-11-24 04:52:55,871 [wrapper] ==== wrapper stderr END ====
[2025-11-24 05:52:57]  *** Error codes and diagnostics ***
[2025-11-24 05:52:57]     "exeErrorCode": 0,
[2025-11-24 05:52:57]     "exeErrorDiag": "",
[2025-11-24 05:52:57]     "pilotErrorCode": 0,
[2025-11-24 05:52:57]     "pilotErrorDiag": "",
[2025-11-24 05:52:57]  *** Listing of results directory ***
[2025-11-24 05:52:57] total 1317768
[2025-11-24 05:52:57] -rw-r--r--. 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-24 05:52:57] -rwx------. 1 boinc boinc     36292 Nov 20 11:19 runpilot2-wrapper.sh
[2025-11-24 05:52:57] -rw-r--r--. 1 boinc boinc      5112 Nov 20 11:21 queuedata.json
[2025-11-24 05:52:57] -rw-r--r--. 1 boinc boinc       100 Nov 23 04:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 05:52:57] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 04:57 run_atlas
[2025-11-24 05:52:57] -rw-r--r--. 1 boinc boinc       105 Nov 23 04:57 job.xml
[2025-11-24 05:52:57] -rw-r--r--. 2 boinc boinc 410865026 Nov 23 04:57 EVNT.47493127._000174.pool.root.1
[2025-11-24 05:52:57] -rw-r--r--. 1 boinc boinc      6393 Nov 23 04:57 init_data.xml
[2025-11-24 05:52:57] -rw-r--r--. 2 boinc boinc     15847 Nov 23 04:57 start_atlas.sh
[2025-11-24 05:52:57] drwxrwx--x. 2 boinc boinc        68 Nov 23 04:57 shared
[2025-11-24 05:52:57] -rw-r--r--. 2 boinc boinc    590100 Nov 23 04:57 input.tar.gz
[2025-11-24 05:52:57] -rw-r--r--. 1 boinc boinc         0 Nov 23 04:57 boinc_lockfile
[2025-11-24 05:52:57] -rw-r--r--. 1 boinc boinc      2786 Nov 23 04:57 pandaJob.out
[2025-11-24 05:52:57] -rw-------. 1 boinc boinc    989784 Nov 23 05:01 agis_schedconf.cvmfs.json
[2025-11-24 05:52:57] drwx------. 5 boinc boinc      4096 Nov 23 05:01 pilot3
[2025-11-24 05:52:57] -rw-r--r--. 1 boinc boinc       533 Nov 24 05:37 boinc_task_state.xml
[2025-11-24 05:52:57] -rw-------. 1 boinc boinc 905635304 Nov 24 05:50 HITS.47523449._001733.pool.root.1
[2025-11-24 05:52:57] -rw-------. 1 boinc boinc      1031 Nov 24 05:51 memory_monitor_summary.json
[2025-11-24 05:52:57] -rw-------. 1 boinc boinc   1526164 Nov 24 05:51 agis_ddmendpoints.agis.ALL.json
[2025-11-24 05:52:57] -rw-------. 1 boinc boinc   2545010 Nov 24 05:51 log.47523449._001733.job.log.tgz.1
[2025-11-24 05:52:57] -rw-------. 1 boinc boinc      8623 Nov 24 05:51 heartbeat.json
[2025-11-24 05:52:57] -rw-------. 1 boinc boinc        95 Nov 24 05:52 pilot_heartbeat.json
[2025-11-24 05:52:57] -rw-r--r--. 1 boinc boinc        29 Nov 24 05:52 wrapper_checkpoint.txt
[2025-11-24 05:52:57] -rw-r--r--. 1 boinc boinc      8192 Nov 24 05:52 boinc_mmap_file
[2025-11-24 05:52:57] -rw-------. 1 boinc boinc      5071 Nov 24 05:52 pilotlog.txt
[2025-11-24 05:52:57] -rw-------. 1 boinc boinc  11948502 Nov 24 05:52 log.47523449._001733.job.log.1
[2025-11-24 05:52:57] -rw-------. 1 boinc boinc       353 Nov 24 05:52 output.list
[2025-11-24 05:52:57] -rw-r--r--. 1 boinc boinc       620 Nov 24 05:52 runtime_log
[2025-11-24 05:52:57] -rw-------. 1 boinc boinc  14510080 Nov 24 05:52 result.tar.gz
[2025-11-24 05:52:57] -rw-r--r--. 1 boinc boinc      8833 Nov 24 05:52 runtime_log.err
[2025-11-24 05:52:57] -rw-------. 1 boinc boinc       662 Nov 24 05:52 lO7LDmgwGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmCOGKDmS1ePyn.diag
[2025-11-24 05:52:57] -rw-r--r--. 1 boinc boinc     21015 Nov 24 05:52 stderr.txt
[2025-11-24 05:52:57] HITS file was successfully produced:
[2025-11-24 05:52:57] -rw-------. 1 boinc boinc 905635304 Nov 24 05:50 shared/HITS.pool.root.1
[2025-11-24 05:52:57]  *** Contents of shared directory: ***
[2025-11-24 05:52:57] total 1300416
[2025-11-24 05:52:57] -rw-r--r--. 2 boinc boinc 410865026 Nov 23 04:57 ATLAS.root_0
[2025-11-24 05:52:57] -rw-r--r--. 2 boinc boinc     15847 Nov 23 04:57 start_atlas.sh
[2025-11-24 05:52:57] -rw-r--r--. 2 boinc boinc    590100 Nov 23 04:57 input.tar.gz
[2025-11-24 05:52:57] -rw-------. 1 boinc boinc 905635304 Nov 24 05:50 HITS.pool.root.1
[2025-11-24 05:52:57] -rw-------. 1 boinc boinc  14510080 Nov 24 05:52 result.tar.gz
05:52:59 (14485): run_atlas exited; CPU time 328685.660134
05:52:59 (14485): called boinc_finish(0)

</stderr_txt>
]]>

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