Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:26:22 (6485): wrapper (7.7.26015): starting
01:26:22 (6485): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 01:26:22] Arguments: --nthreads 8
[2025-11-23 01:26:22] Threads: 8
[2025-11-23 01:26:22] Checking for CVMFS
[2025-11-23 01:26:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 01:26:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 01:26:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 01:26:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 01:26:25] 2.11.2.0 20636 280347 141544 153191 3 186 24150480 25165825 4632 130560 2 123068584 99.888 70110632 2928 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-23 01:26:25] CVMFS is ok
[2025-11-23 01:26:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 01:26:25] Checking for apptainer binary...
[2025-11-23 01:26:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 01:26:25] Running /usr/bin/apptainer --version
[2025-11-23 01:26:25] apptainer version 1.3.2-1.el7
[2025-11-23 01:26:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 01:26:38] cg-vwn312.simple-grid.lan
[2025-11-23 01:26:38] apptainer works
[2025-11-23 01:26:38] Set ATHENA_PROC_NUMBER=8
[2025-11-23 01:26:38] Set ATHENA_CORE_NUMBER=8
[2025-11-23 01:26:39] Starting ATLAS job with PandaID=6893839398
[2025-11-23 01:26:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 03:25:28]  *** The last 200 lines of the pilot log: ***
[2025-11-24 03:25:29] 2025-11-24 02:24:04,007 | INFO     | time since job start (93210s) is within the limit (172800.0s)
[2025-11-24 03:25:29] 2025-11-24 02:24:05,404 | INFO     | monitor loop #6269: job 0:6893839398 is in state 'finished'
[2025-11-24 03:25:29] 2025-11-24 02:24:05,404 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 03:25:29] 2025-11-24 02:24:06,020 | INFO     | time since job start (93212s) is within the limit (172800.0s)
[2025-11-24 03:25:29] 2025-11-24 02:24:07,917 | INFO     | monitor loop #6270: job 0:6893839398 is in state 'finished'
[2025-11-24 03:25:29] 2025-11-24 02:24:07,917 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 03:25:29] 2025-11-24 02:24:08,027 | INFO     | time since job start (93214s) is within the limit (172800.0s)
[2025-11-24 03:25:29] 2025-11-24 02:24:10,034 | INFO     | time since job start (93216s) is within the limit (172800.0s)
[2025-11-24 03:25:29] 2025-11-24 02:24:10,424 | INFO     | monitor loop #6271: job 0:6893839398 is in state 'finished'
[2025-11-24 03:25:29] 2025-11-24 02:24:10,424 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 03:25:29] 2025-11-24 02:24:11,262 | INFO     | PID=10275 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 03:25:29] 2025-11-24 02:24:11,262 | INFO     | .. there are 9 such processes running
[2025-11-24 03:25:29] 2025-11-24 02:24:12,264 | INFO     | time since job start (93218s) is within the limit (172800.0s)
[2025-11-24 03:25:29] 2025-11-24 02:24:12,934 | INFO     | monitor loop #6272: job 0:6893839398 is in state 'finished'
[2025-11-24 03:25:29] 2025-11-24 02:24:12,934 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 03:25:29] 2025-11-24 02:24:14,271 | INFO     | time since job start (93220s) is within the limit (172800.0s)
[2025-11-24 03:25:29] 2025-11-24 02:24:14,347 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 03:25:29] 2025-11-24 02:24:14,348 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-24 03:25:29] 2025-11-24 02:24:14,350 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6893839398/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 03:25:29] 2025-11-24 02:24:14,351 | INFO     | extracted standard info from prmon json
[2025-11-24 03:25:29] 2025-11-24 02:24:14,351 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 03:25:29] 2025-11-24 02:24:14,351 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 03:25:29] 2025-11-24 02:24:14,396 | INFO     | fitting pss+swap vs Time
[2025-11-24 03:25:29] 2025-11-24 02:24:14,399 | INFO     | sum of square deviations: 1084660567315.3018
[2025-11-24 03:25:29] 2025-11-24 02:24:14,482 | INFO     | sum of deviations: 3769755477830.484
[2025-11-24 03:25:29] 2025-11-24 02:24:14,483 | INFO     | mean x: 1763904632.5638998
[2025-11-24 03:25:29] 2025-11-24 02:24:14,483 | INFO     | mean y: 2833322.567193676
[2025-11-24 03:25:29] 2025-11-24 02:24:14,483 | INFO     | intersect: -6127645973.307658
[2025-11-24 03:25:29] 2025-11-24 02:24:14,485 | INFO     | chi2: 30.225425552125472
[2025-11-24 03:25:29] 2025-11-24 02:24:14,488 | INFO     | sum of square deviations: 1073978338657.1233
[2025-11-24 03:25:29] 2025-11-24 02:24:14,617 | INFO     | sum of deviations: 4278503232434.235
[2025-11-24 03:25:29] 2025-11-24 02:24:14,618 | INFO     | mean x: 1763904480.0674157
[2025-11-24 03:25:29] 2025-11-24 02:24:14,618 | INFO     | mean y: 2840584.507600793
[2025-11-24 03:25:29] 2025-11-24 02:24:14,618 | INFO     | intersect: -7024182911.245668
[2025-11-24 03:25:29] 2025-11-24 02:24:14,620 | INFO     | chi2: 26.92466725770907
[2025-11-24 03:25:29] 2025-11-24 02:24:14,620 | INFO     | current chi2=26.92466725770907 (change=10.920469221265568 %)
[2025-11-24 03:25:29] 2025-11-24 02:24:14,620 | INFO     | right removable region: 1512
[2025-11-24 03:25:29] 2025-11-24 02:24:14,627 | INFO     | sum of square deviations: 1073977353507.1248
[2025-11-24 03:25:29] 2025-11-24 02:24:14,711 | INFO     | sum of deviations: 3115564344586.9907
[2025-11-24 03:25:29] 2025-11-24 02:24:14,712 | INFO     | mean x: 1763904785.0674157
[2025-11-24 03:25:29] 2025-11-24 02:24:14,712 | INFO     | mean y: 2842661.1863846662
[2025-11-24 03:25:29] 2025-11-24 02:24:14,712 | INFO     | intersect: -5114172923.598907
[2025-11-24 03:25:29] 2025-11-24 02:24:14,714 | INFO     | chi2: 25.157684215493553
[2025-11-24 03:25:29] 2025-11-24 02:24:14,714 | INFO     | current chi2=25.157684215493553 (change=16.76648465343295 %)
[2025-11-24 03:25:29] 2025-11-24 02:24:14,714 | INFO     | left removable region: 10
[2025-11-24 03:25:29] 2025-11-24 02:24:14,716 | INFO     | sum of square deviations: 1050722852272.9985
[2025-11-24 03:25:29] 2025-11-24 02:24:14,828 | INFO     | sum of deviations: 3122214413983.306
[2025-11-24 03:25:29] 2025-11-24 02:24:14,829 | INFO     | mean x: 1763904754.575233
[2025-11-24 03:25:29] 2025-11-24 02:24:14,829 | INFO     | mean y: 2860372.599201065
[2025-11-24 03:25:29] 2025-11-24 02:24:14,829 | INFO     | intersect: -5238568266.470292
[2025-11-24 03:25:29] 2025-11-24 02:24:14,831 | INFO     | chi2: 16.759891032972938
[2025-11-24 03:25:29] 2025-11-24 02:24:14,831 | INFO     | current memory leak: 2.97 B/s (using 1502 data points, chi2=16.76)
[2025-11-24 03:25:29] 2025-11-24 02:24:14,834 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-24 03:25:29] 2025-11-24 02:24:14,834 | INFO     | ..............................
[2025-11-24 03:25:29] 2025-11-24 02:24:14,834 | INFO     | . Timing measurements:
[2025-11-24 03:25:29] 2025-11-24 02:24:14,834 | INFO     | . get job = 0 s
[2025-11-24 03:25:29] 2025-11-24 02:24:14,834 | INFO     | . initial setup = 8 s
[2025-11-24 03:25:29] 2025-11-24 02:24:14,834 | INFO     | . payload setup = 173 s
[2025-11-24 03:25:29] 2025-11-24 02:24:14,834 | INFO     | . stage-in = 0 s
[2025-11-24 03:25:29] 2025-11-24 02:24:14,834 | INFO     | . payload execution = 92740 s
[2025-11-24 03:25:29] 2025-11-24 02:24:14,834 | INFO     | . stage-out = 5 s
[2025-11-24 03:25:29] 2025-11-24 02:24:14,835 | INFO     | . log creation = 2 s
[2025-11-24 03:25:29] 2025-11-24 02:24:14,835 | INFO     | ..............................
[2025-11-24 03:25:29] 2025-11-24 02:24:15,144 | INFO     | 
[2025-11-24 03:25:29] 2025-11-24 02:24:15,144 | INFO     | job summary report
[2025-11-24 03:25:29] 2025-11-24 02:24:15,144 | INFO     | --------------------------------------------------
[2025-11-24 03:25:29] 2025-11-24 02:24:15,144 | INFO     | PanDA job id: 6893839398
[2025-11-24 03:25:29] 2025-11-24 02:24:15,145 | INFO     | task id: 47523449
[2025-11-24 03:25:29] 2025-11-24 02:24:15,145 | INFO     | errors: (none)
[2025-11-24 03:25:29] 2025-11-24 02:24:15,145 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 03:25:29] 2025-11-24 02:24:15,145 | INFO     | pilot state: finished 
[2025-11-24 03:25:29] 2025-11-24 02:24:15,145 | INFO     | transexitcode: 0
[2025-11-24 03:25:29] 2025-11-24 02:24:15,145 | INFO     | exeerrorcode: 0
[2025-11-24 03:25:29] 2025-11-24 02:24:15,145 | INFO     | exeerrordiag: 
[2025-11-24 03:25:29] 2025-11-24 02:24:15,145 | INFO     | exitcode: 0
[2025-11-24 03:25:29] 2025-11-24 02:24:15,145 | INFO     | exitmsg: OK
[2025-11-24 03:25:29] 2025-11-24 02:24:15,145 | INFO     | cpuconsumptiontime: 341648 s
[2025-11-24 03:25:29] 2025-11-24 02:24:15,146 | INFO     | nevents: 1000
[2025-11-24 03:25:29] 2025-11-24 02:24:15,146 | INFO     | neventsw: 0
[2025-11-24 03:25:29] 2025-11-24 02:24:15,146 | INFO     | pid: 16869
[2025-11-24 03:25:29] 2025-11-24 02:24:15,146 | INFO     | pgrp: 16869
[2025-11-24 03:25:29] 2025-11-24 02:24:15,146 | INFO     | corecount: 8
[2025-11-24 03:25:29] 2025-11-24 02:24:15,146 | INFO     | event service: False
[2025-11-24 03:25:29] 2025-11-24 02:24:15,146 | INFO     | sizes: {0: 2297973, 1: 2298658, 2: 2298857, 13: 2298857, 24: 2298913, 34: 2298941, 45: 2299097, 56: 2299125, 67: 2299153, 77: 2299181, 88: 2299237, 96: 2299807, 99
[2025-11-24 03:25:29] 2025-11-24 02:24:15,146 | INFO     | --------------------------------------------------
[2025-11-24 03:25:29] 2025-11-24 02:24:15,146 | INFO     | 
[2025-11-24 03:25:29] 2025-11-24 02:24:15,146 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-11-24 03:25:29] 2025-11-24 02:24:15,546 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 03:25:29] 2025-11-24 02:24:15,546 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 03:25:29] 2025-11-24 02:24:15,546 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 03:25:29] 2025-11-24 02:24:15,547 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 03:25:29] 2025-11-24 02:24:15,547 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 03:25:29] 2025-11-24 02:24:15,547 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 03:25:29] 2025-11-24 02:24:15,547 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 03:25:29] 2025-11-24 02:24:15,547 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 03:25:29] 2025-11-24 02:24:15,547 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 03:25:29] 2025-11-24 02:24:15,547 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 03:25:29] 2025-11-24 02:24:15,547 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 03:25:29] 2025-11-24 02:24:15,547 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 03:25:29] 2025-11-24 02:24:15,548 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 03:25:29] 2025-11-24 02:24:15,548 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 03:25:29] 2025-11-24 02:24:15,548 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 03:25:29] 2025-11-24 02:24:15,548 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 03:25:29] 2025-11-24 02:24:15,548 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 03:25:29] 2025-11-24 02:24:15,548 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 03:25:29] 2025-11-24 02:24:15,548 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 03:25:29] 2025-11-24 02:24:15,548 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 03:25:29] 2025-11-24 02:24:15,549 | INFO     | job 6893839398 has completed (purged errors)
[2025-11-24 03:25:29] 2025-11-24 02:24:15,549 | INFO     | overall cleanup function is called
[2025-11-24 03:25:29] 2025-11-24 02:24:16,577 | INFO     | --- collectZombieJob: --- 10, [16869]
[2025-11-24 03:25:29] 2025-11-24 02:24:16,577 | INFO     | zombie collector waiting for pid 16869
[2025-11-24 03:25:29] 2025-11-24 02:24:16,578 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 03:25:29] 2025-11-24 02:24:16,578 | INFO     | collected zombie processes
[2025-11-24 03:25:29] 2025-11-24 02:24:16,578 | INFO     | will attempt to kill all subprocesses of pid=16869
[2025-11-24 03:25:29] 2025-11-24 02:24:16,729 | INFO     | process IDs to be killed: [16869] (in reverse order)
[2025-11-24 03:25:29] 2025-11-24 02:24:17,685 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 03:25:29] 2025-11-24 02:24:17,685 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 03:25:29] 2025-11-24 02:24:17,690 | INFO     | did not find any defunct processes belonging to 16869
[2025-11-24 03:25:29] 2025-11-24 02:24:17,693 | INFO     | did not find any defunct processes belonging to 16869
[2025-11-24 03:25:29] 2025-11-24 02:24:17,747 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 03:25:29] 2025-11-24 02:24:17,748 | INFO     | ready for new job
[2025-11-24 03:25:29] 2025-11-24 02:24:17,748 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 03:25:29] 2025-11-24 02:24:17,755 | INFO     | ***************************************
[2025-11-24 03:25:29] 2025-11-24 02:24:17,755 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 03:25:29] 2025-11-24 02:24:17,755 | INFO     | ***************************************
[2025-11-24 03:25:29] 2025-11-24 02:24:17,756 | INFO     | 
[2025-11-24 03:25:29] 2025-11-24 02:24:17,756 | INFO     | pilot is running in a VM
[2025-11-24 03:25:29] 2025-11-24 02:24:17,756 | INFO     | architecture information:
[2025-11-24 03:25:29] 2025-11-24 02:24:17,757 | INFO     | executing command: cat /etc/os-release
[2025-11-24 03:25:29] 2025-11-24 02:24:18,005 | INFO     | cat /etc/os-release:
[2025-11-24 03:25:29] NAME="CentOS Linux"
[2025-11-24 03:25:29] VERSION="7 (Core)"
[2025-11-24 03:25:29] ID="centos"
[2025-11-24 03:25:29] ID_LIKE="rhel fedora"
[2025-11-24 03:25:29] VERSION_ID="7"
[2025-11-24 03:25:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 03:25:29] ANSI_COLOR="0;31"
[2025-11-24 03:25:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 03:25:29] HOME_URL="https://www.centos.org/"
[2025-11-24 03:25:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 03:25:29] 
[2025-11-24 03:25:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 03:25:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 03:25:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 03:25:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 03:25:29] 
[2025-11-24 03:25:29] 2025-11-24 02:24:18,005 | INFO     | ***************************************
[2025-11-24 03:25:29] 2025-11-24 02:24:18,508 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-11-24 03:25:29] 2025-11-24 02:24:18,768 | INFO     | sufficient remaining disk space (495001272320 B)
[2025-11-24 03:25:29] 2025-11-24 02:24:18,768 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 03:25:29] 2025-11-24 02:24:18,768 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 03:25:29] 2025-11-24 02:24:18,768 | INFO     | update_server=False
[2025-11-24 03:25:29] 2025-11-24 02:24:18,769 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 03:25:29] 2025-11-24 02:24:18,769 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 03:25:29] 2025-11-24 02:24:18,915 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 03:25:29] 2025-11-24 02:24:18,964 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 03:25:29] 2025-11-24 02:24:18,964 | INFO     | aborting loop
[2025-11-24 03:25:29] 2025-11-24 02:24:19,391 | INFO     | all data control threads have been joined
[2025-11-24 03:25:29] 2025-11-24 02:24:19,698 | INFO     | all payload control threads have been joined
[2025-11-24 03:25:29] 2025-11-24 02:24:19,774 | INFO     | [job] retrieve thread has finished
[2025-11-24 03:25:29] 2025-11-24 02:24:19,971 | INFO     | [job] job monitor thread has finished
[2025-11-24 03:25:29] 2025-11-24 02:24:20,155 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 03:25:29] 2025-11-24 02:24:20,187 | INFO     | all job control threads have been joined
[2025-11-24 03:25:29] 2025-11-24 02:24:20,380 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 03:25:29] 2025-11-24 02:24:20,397 | INFO     | [data] control thread has finished
[2025-11-24 03:25:29] 2025-11-24 02:24:20,400 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 03:25:29] 2025-11-24 02:24:20,552 | INFO     | [payload] failed_post thread has finished
[2025-11-24 03:25:29] 2025-11-24 02:24:20,688 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 03:25:29] 2025-11-24 02:24:20,704 | INFO     | [payload] control thread has finished
[2025-11-24 03:25:29] 2025-11-24 02:24:20,781 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 03:25:29] 2025-11-24 02:24:20,922 | INFO     | [data] copytool_out thread has finished
[2025-11-24 03:25:29] 2025-11-24 02:24:20,958 | INFO     | [payload] validate_post thread has finished
[2025-11-24 03:25:29] 2025-11-24 02:24:21,112 | INFO     | [data] copytool_in thread has finished
[2025-11-24 03:25:29] 2025-11-24 02:24:21,161 | INFO     | [job] queue monitor thread has finished
[2025-11-24 03:25:29] 2025-11-24 02:24:21,168 | INFO     | [job] validate thread has finished
[2025-11-24 03:25:29] 2025-11-24 02:24:21,193 | INFO     | [job] control thread has finished
[2025-11-24 03:25:29] 2025-11-24 02:24:22,778 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 03:25:29] 2025-11-24 02:24:47,525 | INFO     | PID=10275 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 03:25:29] 2025-11-24 02:24:47,526 | INFO     | .. there are 9 such processes running
[2025-11-24 03:25:29] 2025-11-24 02:24:47,527 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 03:25:29] 2025-11-24 02:24:47,527 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 03:25:29] 2025-11-24 02:24:47,527 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 03:25:29] 2025-11-24 02:25:17,255 | INFO     | [monitor] cgroup control has ended
[2025-11-24 03:25:29] 2025-11-24 02:25:18,737 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139709164095296)>', '<ExcThread(monitor, started 139708868830976)>']
[2025-11-24 03:25:29] 2025-11-24 02:25:19,715 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 03:25:29] 2025-11-24 02:25:19,715 | INFO     | [monitor] control thread has ended
[2025-11-24 03:25:29] 2025-11-24 02:25:23,762 | INFO     | all workflow threads have been joined
[2025-11-24 03:25:29] 2025-11-24 02:25:23,762 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 03:25:29] 2025-11-24 02:25:23,763 | INFO     | traces error code: 0
[2025-11-24 03:25:29] 2025-11-24 02:25:23,763 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 03:25:29] 2025-11-24 02:25:24,089 [wrapper] ==== pilot stdout END ====
[2025-11-24 03:25:29] 2025-11-24 02:25:24,121 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 03:25:29] 2025-11-24 02:25:24,209 [wrapper] pilotpid: 10275
[2025-11-24 03:25:29] 2025-11-24 02:25:24,369 [wrapper] Pilot exit status: 0
[2025-11-24 03:25:29] 2025-11-24 02:25:24,803 [wrapper] pandaids: 6893839398
[2025-11-24 03:25:29] 2025-11-24 02:25:25,499 [wrapper] cleanup supervisor_pilot 15031 10276
[2025-11-24 03:25:29] 2025-11-24 02:25:25,599 [wrapper] Test setup, not cleaning
[2025-11-24 03:25:29] 2025-11-24 02:25:25,713 [wrapper] apfmon messages muted
[2025-11-24 03:25:29] 2025-11-24 02:25:25,834 [wrapper] ==== wrapper stdout END ====
[2025-11-24 03:25:29] 2025-11-24 02:25:25,935 [wrapper] ==== wrapper stderr END ====
[2025-11-24 03:25:29]  *** Error codes and diagnostics ***
[2025-11-24 03:25:29]     "exeErrorCode": 0,
[2025-11-24 03:25:29]     "exeErrorDiag": "",
[2025-11-24 03:25:29]     "pilotErrorCode": 0,
[2025-11-24 03:25:29]     "pilotErrorDiag": "",
[2025-11-24 03:25:29]  *** Listing of results directory ***
[2025-11-24 03:25:29] total 1341520
[2025-11-24 03:25:29] -rw-r--r--. 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-24 03:25:29] -rw-r--r--. 1 boinc boinc      5112 Nov 20 11:17 queuedata.json
[2025-11-24 03:25:29] -rwx------. 1 boinc boinc     36292 Nov 20 11:18 runpilot2-wrapper.sh
[2025-11-24 03:25:29] -rw-r--r--. 1 boinc boinc       100 Nov 23 01:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 03:25:29] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 01:26 run_atlas
[2025-11-24 03:25:29] -rw-r--r--. 1 boinc boinc       105 Nov 23 01:26 job.xml
[2025-11-24 03:25:29] -rw-r--r--. 2 boinc boinc 410754025 Nov 23 01:26 EVNT.47493127._000151.pool.root.1
[2025-11-24 03:25:29] -rw-r--r--. 1 boinc boinc      6390 Nov 23 01:26 init_data.xml
[2025-11-24 03:25:29] -rw-r--r--. 2 boinc boinc     15847 Nov 23 01:26 start_atlas.sh
[2025-11-24 03:25:29] drwxrwx--x. 2 boinc boinc        68 Nov 23 01:26 shared
[2025-11-24 03:25:29] -rw-r--r--. 2 boinc boinc    590101 Nov 23 01:26 input.tar.gz
[2025-11-24 03:25:29] -rw-r--r--. 1 boinc boinc         0 Nov 23 01:26 boinc_lockfile
[2025-11-24 03:25:29] -rw-r--r--. 1 boinc boinc      2783 Nov 23 01:26 pandaJob.out
[2025-11-24 03:25:29] -rw-------. 1 boinc boinc    989784 Nov 23 01:30 agis_schedconf.cvmfs.json
[2025-11-24 03:25:29] drwx------. 5 boinc boinc      4096 Nov 23 01:30 pilot3
[2025-11-24 03:25:29] -rw-r--r--. 1 boinc boinc       533 Nov 24 02:54 boinc_task_state.xml
[2025-11-24 03:25:29] -rw-------. 1 boinc boinc 929043285 Nov 24 03:21 HITS.47523449._001501.pool.root.1
[2025-11-24 03:25:29] -rw-------. 1 boinc boinc      1031 Nov 24 03:22 memory_monitor_summary.json
[2025-11-24 03:25:29] -rw-------. 1 boinc boinc   1526164 Nov 24 03:22 agis_ddmendpoints.agis.ALL.json
[2025-11-24 03:25:29] -rw-------. 1 boinc boinc   2582587 Nov 24 03:22 log.47523449._001501.job.log.tgz.1
[2025-11-24 03:25:29] -rw-------. 1 boinc boinc      8639 Nov 24 03:24 heartbeat.json
[2025-11-24 03:25:29] -rw-------. 1 boinc boinc        95 Nov 24 03:24 pilot_heartbeat.json
[2025-11-24 03:25:29] -rw-r--r--. 1 boinc boinc        29 Nov 24 03:25 wrapper_checkpoint.txt
[2025-11-24 03:25:29] -rw-r--r--. 1 boinc boinc      8192 Nov 24 03:25 boinc_mmap_file
[2025-11-24 03:25:29] -rw-------. 1 boinc boinc      4884 Nov 24 03:25 pilotlog.txt
[2025-11-24 03:25:29] -rw-------. 1 boinc boinc  12421517 Nov 24 03:25 log.47523449._001501.job.log.1
[2025-11-24 03:25:29] -rw-------. 1 boinc boinc       353 Nov 24 03:25 output.list
[2025-11-24 03:25:29] -rw-r--r--. 1 boinc boinc       620 Nov 24 03:25 runtime_log
[2025-11-24 03:25:29] -rw-------. 1 boinc boinc  15022080 Nov 24 03:25 result.tar.gz
[2025-11-24 03:25:29] -rw-------. 1 boinc boinc       662 Nov 24 03:25 tLKKDm3uGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm0IHKDmdfpvfn.diag
[2025-11-24 03:25:29] -rw-r--r--. 1 boinc boinc      8817 Nov 24 03:25 runtime_log.err
[2025-11-24 03:25:29] -rw-r--r--. 1 boinc boinc     21504 Nov 24 03:25 stderr.txt
[2025-11-24 03:25:29] HITS file was successfully produced:
[2025-11-24 03:25:29] -rw-------. 1 boinc boinc 929043285 Nov 24 03:21 shared/HITS.pool.root.1
[2025-11-24 03:25:29]  *** Contents of shared directory: ***
[2025-11-24 03:25:29] total 1323668
[2025-11-24 03:25:29] -rw-r--r--. 2 boinc boinc 410754025 Nov 23 01:26 ATLAS.root_0
[2025-11-24 03:25:29] -rw-r--r--. 2 boinc boinc     15847 Nov 23 01:26 start_atlas.sh
[2025-11-24 03:25:29] -rw-r--r--. 2 boinc boinc    590101 Nov 23 01:26 input.tar.gz
[2025-11-24 03:25:29] -rw-------. 1 boinc boinc 929043285 Nov 24 03:21 HITS.pool.root.1
[2025-11-24 03:25:29] -rw-------. 1 boinc boinc  15022080 Nov 24 03:25 result.tar.gz
03:25:30 (6485): run_atlas exited; CPU time 342380.691395
03:25:30 (6485): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN